AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019878.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019878.01.T01 MTR_0003s0620 64.646 297 13 2 1 297 1 205 1.25e-127 362
MsG0480019878.01.T01 MTR_0003s0620 67.857 168 5 1 1 168 1 119 7.07e-73 221
MsG0480019878.01.T01 MTR_2g035820 28.975 283 133 8 7 279 2 226 5.08e-28 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019878.01.T01 AT3G60910 41.840 337 72 3 1 298 1 252 2.63e-82 249
MsG0480019878.01.T01 AT3G60910 42.920 226 54 2 112 298 1 190 1.72e-54 176
MsG0480019878.01.T01 AT3G17365 29.577 284 124 7 10 279 7 228 5.35e-28 108
MsG0480019878.01.T01 AT3G17365 29.393 313 125 10 10 279 7 266 1.74e-26 105

Find 51 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTTTCTCTCTTTCTTCT+AGG 0.162713 4:+28874888 MsG0480019878.01.T01:CDS
TCTTTCTTCTAGGATTCTTA+TGG 0.228717 4:+28874898 MsG0480019878.01.T01:CDS
TGCAGTTATATCGGAGGATA+TGG 0.336489 4:+28877369 MsG0480019878.01.T01:CDS
TTCGATGAAGTACTACATTC+TGG 0.345711 4:-28879418 None:intergenic
ATTACGGTGATGCTCATTAC+TGG 0.352645 4:+28874789 MsG0480019878.01.T01:CDS
ACATATATAAAGTGAGAATC+TGG 0.387337 4:-28879511 None:intergenic
TAAGCAAACCTGTATACAAT+TGG 0.406097 4:+28878226 MsG0480019878.01.T01:CDS
TTCATCGAAGAAATCATTGT+TGG 0.406328 4:+28879432 MsG0480019878.01.T01:CDS
GAGAAAGAGTGACGAAGAAA+AGG 0.410071 4:-28874875 None:intergenic
ATAAGACATCAATGTTTAAT+CGG 0.418037 4:-28879579 None:intergenic
CTTTATATATGTTTGTAGAA+AGG 0.430121 4:+28879522 MsG0480019878.01.T01:CDS
AGGATTCTTATGGTTGGTTG+TGG 0.432753 4:+28874908 MsG0480019878.01.T01:CDS
GGGCTTACTACCAGCAGATT+GGG 0.437562 4:+28879477 MsG0480019878.01.T01:CDS
TAGATATGCAGATGGATGTC+AGG 0.442877 4:+28877588 MsG0480019878.01.T01:intron
CCCTTGTCAGTAAGAGGAAT+AGG 0.443413 4:-28879457 None:intergenic
ATGAGCATCACCGTAATCAT+AGG 0.443536 4:-28874783 None:intergenic
CTTCATCCATGCAGCAAGAC+CGG 0.443547 4:+28879384 MsG0480019878.01.T01:CDS
TCTTCTAGGATTCTTATGGT+TGG 0.447553 4:+28874902 MsG0480019878.01.T01:CDS
GGCAGAAGGGTGAAATCTTA+CGG 0.457030 4:-28878269 None:intergenic
AGGGCTTACTACCAGCAGAT+TGG 0.462965 4:+28879476 MsG0480019878.01.T01:CDS
AATTGTATACAGGTTTGCTT+AGG 0.468189 4:-28878224 None:intergenic
AAGTGGGGTAAGAAAGGAAA+AGG 0.474615 4:-28874947 None:intergenic
ACACCATCAAAAGATTCATC+TGG 0.478624 4:-28877626 None:intergenic
ATGGTTGGTTGTGGCAATGC+TGG 0.484139 4:+28874917 MsG0480019878.01.T01:CDS
TATGGTCAAAGATGGTTATG+AGG 0.486363 4:+28877387 MsG0480019878.01.T01:CDS
GAAAATTTACAAGGAGCAAA+CGG 0.493433 4:+28877338 MsG0480019878.01.T01:CDS
AGTTGCAACACCTATGATTA+CGG 0.493435 4:+28874773 MsG0480019878.01.T01:CDS
AGTAAGCCCTTGTCAGTAAG+AGG 0.500025 4:-28879463 None:intergenic
CCAGTTCAGGAAAAGGCAGA+AGG 0.515297 4:-28878283 None:intergenic
TTCATCCATGCAGCAAGACC+GGG 0.530388 4:+28879385 MsG0480019878.01.T01:CDS
CGCCTCTTGCAGATTACATA+CGG 0.537943 4:+28878177 MsG0480019878.01.T01:intron
TCAATGTTTAATCGGTATGC+GGG 0.549845 4:-28879571 None:intergenic
CATTCTGGCTTATGAAATCC+CGG 0.551495 4:-28879403 None:intergenic
TCTTCCACAACCCAATCTGC+TGG 0.561585 4:-28879487 None:intergenic
TATACAGGTTTGCTTAGGTG+AGG 0.565749 4:-28878219 None:intergenic
TCGGAGGATATGGTCAAAGA+TGG 0.576243 4:+28877379 MsG0480019878.01.T01:CDS
AGAAAGGTAAATGACACAAA+CGG 0.578068 4:+28879538 MsG0480019878.01.T01:CDS
TTACGGTGATGCTCATTACT+GGG 0.578507 4:+28874790 MsG0480019878.01.T01:CDS
AGGTGAGGCATCCGTACTGT+TGG 0.584528 4:-28878204 None:intergenic
GAAATCCCGGTCTTGCTGCA+TGG 0.593948 4:-28879390 None:intergenic
AGATATGCAGATGGATGTCA+GGG 0.594871 4:+28877589 MsG0480019878.01.T01:intron
ATCAATGTTTAATCGGTATG+CGG 0.595207 4:-28879572 None:intergenic
ACCTATTCCTCTTACTGACA+AGG 0.598659 4:+28879456 MsG0480019878.01.T01:CDS
ACTACCAGCAGATTGGGTTG+TGG 0.599320 4:+28879483 MsG0480019878.01.T01:CDS
CAGTTCAGGAAAAGGCAGAA+GGG 0.601944 4:-28878282 None:intergenic
AATCTCAATAGATATGCAGA+TGG 0.610505 4:+28877580 MsG0480019878.01.T01:intron
GGACGCTCGTTACATTCAAG+AGG 0.615494 4:+28874811 MsG0480019878.01.T01:CDS
CCTATTCCTCTTACTGACAA+GGG 0.617564 4:+28879457 MsG0480019878.01.T01:CDS
GCTCGTTACATTCAAGAGGG+TGG 0.621368 4:+28874815 MsG0480019878.01.T01:CDS
CATACGGTGATCCAACAGTA+CGG 0.637956 4:+28878193 MsG0480019878.01.T01:CDS
GACGCTCGTTACATTCAAGA+GGG 0.670795 4:+28874812 MsG0480019878.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAATCTATAATTATAT+AGG + Chr4:28877699-28877718 MsG0480019878.01.T01:intron 10.0%
!! ATTATCTATATATTAAGATT+TGG - Chr4:28874980-28874999 None:intergenic 10.0%
!! GATATATACAAAAAAAATAT+TGG - Chr4:28876042-28876061 None:intergenic 10.0%
!! TATATACAAAAAAAATATTG+GGG - Chr4:28876040-28876059 None:intergenic 10.0%
!!! ATTTTAATTAAAAGTATGTT+TGG + Chr4:28879008-28879027 MsG0480019878.01.T01:intron 10.0%
!!! TATTTTAAATCATTTATGTT+TGG - Chr4:28879166-28879185 None:intergenic 10.0%
!!! TTTTAGAATATTGATAATTT+GGG + Chr4:28875151-28875170 MsG0480019878.01.T01:intron 10.0%
!! AACAAAAAAAAACGTATAAT+TGG - Chr4:28878030-28878049 None:intergenic 15.0%
!! AACAAGTAAAATAATGTTAT+TGG - Chr4:28877498-28877517 None:intergenic 15.0%
!! ATCATATATCTTTGATAAAA+CGG - Chr4:28878493-28878512 None:intergenic 15.0%
!! TAAAAAGAAAAGAAAATTTG+AGG - Chr4:28877874-28877893 None:intergenic 15.0%
!! TTACTGTTATAATTAATGTT+TGG + Chr4:28878918-28878937 MsG0480019878.01.T01:intron 15.0%
!!! AATTTTTCAGAAAATTTACA+AGG + Chr4:28877329-28877348 MsG0480019878.01.T01:CDS 15.0%
!!! ATATCCATATGAAATTTTAT+CGG + Chr4:28879313-28879332 MsG0480019878.01.T01:intron 15.0%
!!! GTTTTAGAATATTGATAATT+TGG + Chr4:28875150-28875169 MsG0480019878.01.T01:intron 15.0%
!!! TCTCTTTAAAATATTATTGA+TGG - Chr4:28875028-28875047 None:intergenic 15.0%
!!! TTTCTTTTTATATTTTAGTG+TGG + Chr4:28877884-28877903 MsG0480019878.01.T01:intron 15.0%
!! AAAAACATAATAAGGTCATT+CGG - Chr4:28878347-28878366 None:intergenic 20.0%
!! AAATCTAGAGATTAATTACT+TGG + Chr4:28876839-28876858 MsG0480019878.01.T01:intron 20.0%
!! ATAACCGATAAAATTTCATA+TGG - Chr4:28879320-28879339 None:intergenic 20.0%
!! ATAAGACATCAATGTTTAAT+CGG - Chr4:28879582-28879601 None:intergenic 20.0%
!! ATAATAAATGACAACATTAG+AGG + Chr4:28875662-28875681 MsG0480019878.01.T01:intron 20.0%
!! ATAATTGCAAAATGTTAATC+AGG + Chr4:28875053-28875072 MsG0480019878.01.T01:intron 20.0%
!! ATTAAAATTACGAAAGAACT+AGG - Chr4:28876130-28876149 None:intergenic 20.0%
!! CTTTATATATGTTTGTAGAA+AGG + Chr4:28879522-28879541 MsG0480019878.01.T01:CDS 20.0%
!! TAATAAATGACAACATTAGA+GGG + Chr4:28875663-28875682 MsG0480019878.01.T01:intron 20.0%
!! TATATAGATAATCATATCGT+AGG + Chr4:28874988-28875007 MsG0480019878.01.T01:intron 20.0%
!! TCAAGTTCAAAAACATAATA+AGG - Chr4:28878355-28878374 None:intergenic 20.0%
!! TCAATGATAAAAAAAGACTT+AGG + Chr4:28876149-28876168 MsG0480019878.01.T01:intron 20.0%
!! TTAAAATAATACTAAGCACA+AGG - Chr4:28878586-28878605 None:intergenic 20.0%
!! TTAAAATTACGAAAGAACTA+GGG - Chr4:28876129-28876148 None:intergenic 20.0%
!!! AACTTGAAGGAATTTTTTTA+CGG + Chr4:28876302-28876321 MsG0480019878.01.T01:intron 20.0%
!!! AAGAATTTAAGATATGTCAA+TGG - Chr4:28877555-28877574 None:intergenic 20.0%
!!! AATTGGATTTTATGAAGATA+TGG - Chr4:28878861-28878880 None:intergenic 20.0%
!!! GTAAATTTTCTGAAAAATTG+TGG - Chr4:28877328-28877347 None:intergenic 20.0%
!!! TTATTATGTTTTTGAACTTG+AGG + Chr4:28878354-28878373 MsG0480019878.01.T01:intron 20.0%
! AAAAATTTCTTCAACTTGAG+CGG - Chr4:28875510-28875529 None:intergenic 25.0%
! AACCTATAGATTATGTAGTA+AGG + Chr4:28876737-28876756 MsG0480019878.01.T01:intron 25.0%
! ACATATATAAAGTGAGAATC+TGG - Chr4:28879514-28879533 None:intergenic 25.0%
! AGATTTGATTAACTACGAAA+AGG - Chr4:28877689-28877708 None:intergenic 25.0%
! AGTCGTTTAATCTTTATAGT+CGG + Chr4:28876894-28876913 MsG0480019878.01.T01:intron 25.0%
! CAAAGATAAAATAAGTGTAG+TGG + Chr4:28875601-28875620 MsG0480019878.01.T01:intron 25.0%
! CATACCCAAAATAAAATACT+CGG + Chr4:28876686-28876705 MsG0480019878.01.T01:intron 25.0%
! CTATTCTCATTAAAAGAATG+AGG - Chr4:28877209-28877228 None:intergenic 25.0%
! TAAAATTACGAAAGAACTAG+GGG - Chr4:28876128-28876147 None:intergenic 25.0%
! TAAACATTGATGTCTTATAG+TGG + Chr4:28879584-28879603 MsG0480019878.01.T01:CDS 25.0%
! TAGACGTTTATACACATTAA+AGG - Chr4:28875414-28875433 None:intergenic 25.0%
! TATACATTTGTGGATTTACT+GGG + Chr4:28875179-28875198 MsG0480019878.01.T01:intron 25.0%
! TCTTCCAATTTAACCAAAAA+TGG + Chr4:28877180-28877199 MsG0480019878.01.T01:intron 25.0%
! TGAACAAGTGTTTATAATTG+CGG + Chr4:28875307-28875326 MsG0480019878.01.T01:intron 25.0%
!! ATTAATGTTTGGTTCAAAAG+AGG + Chr4:28878929-28878948 MsG0480019878.01.T01:intron 25.0%
!! GATGTATTTTGCAGTTATAT+CGG + Chr4:28877360-28877379 MsG0480019878.01.T01:CDS 25.0%
!! GTAATTTTCCAATTGTATAC+AGG - Chr4:28878237-28878256 None:intergenic 25.0%
!! TAAAAGTATGTTTGGTTCAA+GGG + Chr4:28879016-28879035 MsG0480019878.01.T01:intron 25.0%
!! TGGATATTTTATATGCATTC+AGG - Chr4:28879300-28879319 None:intergenic 25.0%
!! TTAAAAGTATGTTTGGTTCA+AGG + Chr4:28879015-28879034 MsG0480019878.01.T01:intron 25.0%
!! TTCACTCTATTTTCCAAATT+AGG - Chr4:28879223-28879242 None:intergenic 25.0%
!!! ATGTTGGTAATCTCATTTAA+TGG + Chr4:28878083-28878102 MsG0480019878.01.T01:intron 25.0%
!!! CACTTATTTTATCTTTGTGT+AGG - Chr4:28875598-28875617 None:intergenic 25.0%
!!! GAATCCATTTTTGGTTAAAT+TGG - Chr4:28877187-28877206 None:intergenic 25.0%
!!! TAAGCCGAGTATTTTATTTT+GGG - Chr4:28875895-28875914 None:intergenic 25.0%
!!! TACATCATTTTGAGTTAGTA+AGG + Chr4:28875750-28875769 MsG0480019878.01.T01:intron 25.0%
!!! TTATTTTGTGCCTTTTTCTT+TGG + Chr4:28878429-28878448 MsG0480019878.01.T01:intron 25.0%
!!! TTGGTTCAATTTTTAAGAGA+GGG - Chr4:28879147-28879166 None:intergenic 25.0%
!!! TTTGATGGTGTAATTGATAA+AGG + Chr4:28877638-28877657 MsG0480019878.01.T01:intron 25.0%
!!! TTTGGTTCAATTTTTAAGAG+AGG - Chr4:28879148-28879167 None:intergenic 25.0%
!!! TTTTTTTCTCATCATGTCAA+TGG - Chr4:28877443-28877462 None:intergenic 25.0%
AAATGCTGATATTGTTAGGT+TGG + Chr4:28875788-28875807 MsG0480019878.01.T01:intron 30.0%
AACATCAATTTGAGTCAGTA+AGG + Chr4:28876548-28876567 MsG0480019878.01.T01:intron 30.0%
AAGATTTGGACCAAAAAAGT+GGG - Chr4:28874966-28874985 None:intergenic 30.0%
AATCTCAATAGATATGCAGA+TGG + Chr4:28877580-28877599 MsG0480019878.01.T01:intron 30.0%
AATGTGTATAAACGTCTAAG+AGG + Chr4:28876215-28876234 MsG0480019878.01.T01:intron 30.0%
ACACTCTTAGAATTTGTAGT+TGG - Chr4:28875377-28875396 None:intergenic 30.0%
ACCATACCATTAATGAATCA+AGG - Chr4:28877799-28877818 None:intergenic 30.0%
ACGTCTCTTATTAATATCAC+CGG - Chr4:28875553-28875572 None:intergenic 30.0%
ACTTAGTTTATCTTCGTGTT+GGG - Chr4:28876381-28876400 None:intergenic 30.0%
AGAAAGGTAAATGACACAAA+CGG + Chr4:28879538-28879557 MsG0480019878.01.T01:CDS 30.0%
AGAGTATGCGAAAACTTAAT+TGG - Chr4:28878878-28878897 None:intergenic 30.0%
AGGAAAATTCTTGTATGACT+CGG - Chr4:28877154-28877173 None:intergenic 30.0%
AGTGTCCAACCTAATAATAT+CGG - Chr4:28876594-28876613 None:intergenic 30.0%
ATATGGTAATCCATGGAAAA+TGG - Chr4:28878844-28878863 None:intergenic 30.0%
ATCAATGTTTAATCGGTATG+CGG - Chr4:28879575-28879594 None:intergenic 30.0%
CAAAATAAAATACTCGGCTT+AGG + Chr4:28875894-28875913 MsG0480019878.01.T01:intron 30.0%
CACTCTTAGAATTTGTAGTT+GGG - Chr4:28875376-28875395 None:intergenic 30.0%
CAGACCCAAAATAAAATACT+CGG + Chr4:28875888-28875907 MsG0480019878.01.T01:intron 30.0%
CCATACCATTAATGAATCAA+GGG - Chr4:28877798-28877817 None:intergenic 30.0%
CGTATATGATCCAAAGAAAA+AGG - Chr4:28878442-28878461 None:intergenic 30.0%
CTCCTTACTACATAATCTAT+AGG - Chr4:28876742-28876761 None:intergenic 30.0%
GAAAATTTACAAGGAGCAAA+CGG + Chr4:28877338-28877357 MsG0480019878.01.T01:CDS 30.0%
GAGGAAAATAGAGATATGTT+TGG + Chr4:28878963-28878982 MsG0480019878.01.T01:intron 30.0%
GATGACACCTATCATATAAA+AGG + Chr4:28875694-28875713 MsG0480019878.01.T01:intron 30.0%
GGTGAATAAAAGTCTAACTA+AGG - Chr4:28878793-28878812 None:intergenic 30.0%
GTATACACTCTTAGAATTTG+TGG - Chr4:28875381-28875400 None:intergenic 30.0%
GTATACATTTGTGGATTTAC+TGG + Chr4:28875178-28875197 MsG0480019878.01.T01:intron 30.0%
TAAGACGTGATTGAATAACA+GGG + Chr4:28875440-28875459 MsG0480019878.01.T01:intron 30.0%
TAAGATTTGGACCAAAAAAG+TGG - Chr4:28874967-28874986 None:intergenic 30.0%
TAAGCAAACCTGTATACAAT+TGG + Chr4:28878226-28878245 MsG0480019878.01.T01:CDS 30.0%
TATGAAGATATGGTAATCCA+TGG - Chr4:28878851-28878870 None:intergenic 30.0%
TATGGTAATCCATGGAAAAT+GGG - Chr4:28878843-28878862 None:intergenic 30.0%
TCAAGCGATGAACATAAAAA+TGG - Chr4:28878669-28878688 None:intergenic 30.0%
TCAGTTAAGTGATAAATCCA+TGG - Chr4:28875474-28875493 None:intergenic 30.0%
TCCACATATAGCAAGAAAAA+AGG - Chr4:28878316-28878335 None:intergenic 30.0%
TCTTCATAAATTGAAGCAGA+GGG - Chr4:28876995-28877014 None:intergenic 30.0%
TGAGAGTTAATCAAGATGAT+GGG + Chr4:28878686-28878705 MsG0480019878.01.T01:intron 30.0%
TGATAAAAAAAGACTTAGGC+AGG + Chr4:28876153-28876172 MsG0480019878.01.T01:intron 30.0%
TGATTAACTACGAAAAGGTA+CGG - Chr4:28877684-28877703 None:intergenic 30.0%
TGGAAAATGCTGATATTGTT+AGG + Chr4:28875784-28875803 MsG0480019878.01.T01:intron 30.0%
TTAATAAGAGACGTAGTGTT+CGG + Chr4:28875559-28875578 MsG0480019878.01.T01:intron 30.0%
TTATCGTACAAATGTAAGAC+CGG + Chr4:28875531-28875550 MsG0480019878.01.T01:intron 30.0%
TTCATCGAAGAAATCATTGT+TGG + Chr4:28879432-28879451 MsG0480019878.01.T01:CDS 30.0%
TTCTTCATAAATTGAAGCAG+AGG - Chr4:28876996-28877015 None:intergenic 30.0%
TTGAGAGTTAATCAAGATGA+TGG + Chr4:28878685-28878704 MsG0480019878.01.T01:intron 30.0%
! AAAAGTATGTTTGGTTCAAG+GGG + Chr4:28879017-28879036 MsG0480019878.01.T01:intron 30.0%
! AAACTACTTTGAAAACTCCT+TGG - Chr4:28877044-28877063 None:intergenic 30.0%
! AAGAATGAGGAATCCATTTT+TGG - Chr4:28877196-28877215 None:intergenic 30.0%
! AATGACAACATTAGAGTGTT+TGG + Chr4:28876461-28876480 MsG0480019878.01.T01:intron 30.0%
! AATTGTATACAGGTTTGCTT+AGG - Chr4:28878227-28878246 None:intergenic 30.0%
! AGATATGTTTGGTTCAAAAG+AGG + Chr4:28878974-28878993 MsG0480019878.01.T01:intron 30.0%
! AGGAGTTTTCAAAGTAGTTT+AGG + Chr4:28877044-28877063 MsG0480019878.01.T01:intron 30.0%
! ATAGTTAGCTTGATTCAGAA+TGG - Chr4:28877115-28877134 None:intergenic 30.0%
! ATATGTTTGGTTCAAAAGAG+GGG + Chr4:28878976-28878995 MsG0480019878.01.T01:intron 30.0%
! ATCAAGCTAACTATGTTTTG+TGG + Chr4:28877121-28877140 MsG0480019878.01.T01:intron 30.0%
! GATATGTTTGGTTCAAAAGA+GGG + Chr4:28878975-28878994 MsG0480019878.01.T01:intron 30.0%
! TTTCCAGATGAATCTTTTGA+TGG + Chr4:28877623-28877642 MsG0480019878.01.T01:CDS 30.0%
!! AAAAATTCCTTCAAGTTGAG+CGG - Chr4:28876299-28876318 None:intergenic 30.0%
!! AGTGAAATAACTTGTTGCAT+AGG + Chr4:28879237-28879256 MsG0480019878.01.T01:intron 30.0%
!! CATCTTGCTATTATCTATCA+TGG + Chr4:28878124-28878143 MsG0480019878.01.T01:intron 30.0%
!! CTAAGCCGAGTATTTTATTT+TGG - Chr4:28875896-28875915 None:intergenic 30.0%
!! TCTTTCTTCTAGGATTCTTA+TGG + Chr4:28874898-28874917 MsG0480019878.01.T01:CDS 30.0%
!! TTTTGATTCCCCAATTTGAA+GGG - Chr4:28879087-28879106 None:intergenic 30.0%
!! TTTTTGATTCCCCAATTTGA+AGG - Chr4:28879088-28879107 None:intergenic 30.0%
AAAGGCCGATATTATTAGGT+TGG + Chr4:28876586-28876605 MsG0480019878.01.T01:intron 35.0%
AATAAAATACTCGGCTTAGG+TGG + Chr4:28875897-28875916 MsG0480019878.01.T01:intron 35.0%
AATCAAAAAGTGGTCCAAGA+GGG + Chr4:28879099-28879118 MsG0480019878.01.T01:intron 35.0%
ACACCATCAAAAGATTCATC+TGG - Chr4:28877629-28877648 None:intergenic 35.0%
ACCTATCATATAAAAGGTGG+TGG + Chr4:28875700-28875719 MsG0480019878.01.T01:intron 35.0%
ACTCTTTCTCTCTTTCTTCT+AGG + Chr4:28874888-28874907 MsG0480019878.01.T01:CDS 35.0%
AGATTTGGACCAAAAAAGTG+GGG - Chr4:28874965-28874984 None:intergenic 35.0%
AGGAACCCTTGATTCATTAA+TGG + Chr4:28877790-28877809 MsG0480019878.01.T01:intron 35.0%
AGTTGCAACACCTATGATTA+CGG + Chr4:28874773-28874792 MsG0480019878.01.T01:CDS 35.0%
ATAACAGGGAAACATTTCCA+TGG + Chr4:28875454-28875473 MsG0480019878.01.T01:intron 35.0%
CAAATTGGGGAATCAAAAAG+TGG + Chr4:28879089-28879108 MsG0480019878.01.T01:intron 35.0%
CACTTAGTTTATCTTCGTGT+TGG - Chr4:28876382-28876401 None:intergenic 35.0%
CCCTTGATTCATTAATGGTA+TGG + Chr4:28877795-28877814 MsG0480019878.01.T01:intron 35.0%
CGAAGATAAACTAAGTGTAG+CGG + Chr4:28876385-28876404 MsG0480019878.01.T01:intron 35.0%
CTAAGACGTGATTGAATAAC+AGG + Chr4:28875439-28875458 MsG0480019878.01.T01:intron 35.0%
CTCCTTACTACAAAATCTAC+AGG - Chr4:28875944-28875963 None:intergenic 35.0%
GAATAACAGAGACAATTCCA+TGG + Chr4:28876243-28876262 MsG0480019878.01.T01:intron 35.0%
GACACCTATCATATAAAAGG+TGG + Chr4:28875697-28875716 MsG0480019878.01.T01:intron 35.0%
GATGACACCTATCATAGAAA+AGG + Chr4:28876483-28876502 MsG0480019878.01.T01:intron 35.0%
GCAGTTAAGTGATAAATCCA+TGG - Chr4:28876263-28876282 None:intergenic 35.0%
GGTGTAATTGATAAAGGTAG+TGG + Chr4:28877644-28877663 MsG0480019878.01.T01:intron 35.0%
GTTAAATTGGAAGACATGTC+AGG - Chr4:28877174-28877193 None:intergenic 35.0%
GTTATATGAGAGGTAGTGTT+GGG + Chr4:28876346-28876365 MsG0480019878.01.T01:intron 35.0%
TAAACGATGAGAACAATCAG+TGG - Chr4:28877825-28877844 None:intergenic 35.0%
TACCTCTCATATAACATCAC+TGG - Chr4:28876341-28876360 None:intergenic 35.0%
TATGGTCAAAGATGGTTATG+AGG + Chr4:28877387-28877406 MsG0480019878.01.T01:CDS 35.0%
TCAATGTTTAATCGGTATGC+GGG - Chr4:28879574-28879593 None:intergenic 35.0%
TGCTATTGCATTTACACTTG+TGG + Chr4:28877752-28877771 MsG0480019878.01.T01:intron 35.0%
TGGAAAAGGCCGATATTATT+AGG + Chr4:28876582-28876601 MsG0480019878.01.T01:intron 35.0%
TGTTATATGAGAGGTAGTGT+TGG + Chr4:28876345-28876364 MsG0480019878.01.T01:intron 35.0%
TTACAACAACAACAACAACC+AGG - Chr4:28876940-28876959 None:intergenic 35.0%
TTATGATGAGCTTCAGTTCA+TGG + Chr4:28878718-28878737 MsG0480019878.01.T01:intron 35.0%
TTGAACCAAGATTCGAACTA+GGG - Chr4:28878766-28878785 None:intergenic 35.0%
TTGGATCATATACGAAGCAA+GGG + Chr4:28878448-28878467 MsG0480019878.01.T01:intron 35.0%
TTGGGAACTGTATACATTTG+TGG + Chr4:28875169-28875188 MsG0480019878.01.T01:intron 35.0%
TTTGATTCCCCAATTTGAAG+GGG - Chr4:28879086-28879105 None:intergenic 35.0%
TTTGGATCATATACGAAGCA+AGG + Chr4:28878447-28878466 MsG0480019878.01.T01:intron 35.0%
! AAACACAGTTAGTTTGACTC+AGG - Chr4:28877085-28877104 None:intergenic 35.0%
! AATTCTTGTATGACTCGGAA+TGG - Chr4:28877149-28877168 None:intergenic 35.0%
! AGGTCTTATCGAACTAAGTA+GGG - Chr4:28876920-28876939 None:intergenic 35.0%
! CATTTTTCCAGTTCAGGAAA+AGG - Chr4:28878293-28878312 None:intergenic 35.0%
! CTTTTGACAGTTGCAAAATG+TGG + Chr4:28878536-28878555 MsG0480019878.01.T01:intron 35.0%
! GACCTGTAGATTTTGTAGTA+AGG + Chr4:28875939-28875958 MsG0480019878.01.T01:intron 35.0%
! GTATTTTGCAGTTATATCGG+AGG + Chr4:28877363-28877382 MsG0480019878.01.T01:CDS 35.0%
! GTCAAACTAACTGTGTTTTG+TGG + Chr4:28877087-28877106 MsG0480019878.01.T01:intron 35.0%
! GTTTGGTTCAAAAGAGGAAA+CGG + Chr4:28878935-28878954 MsG0480019878.01.T01:intron 35.0%
! TATTTTACCGCTCAACTTGA+AGG + Chr4:28876289-28876308 MsG0480019878.01.T01:intron 35.0%
! TCCACCACCTTTTATATGAT+AGG - Chr4:28875704-28875723 None:intergenic 35.0%
! TTAGACTTTTATTCACCTCC+TGG + Chr4:28878796-28878815 MsG0480019878.01.T01:intron 35.0%
! TTCGATGAAGTACTACATTC+TGG - Chr4:28879421-28879440 None:intergenic 35.0%
! TTTGGTTCAAAAGAGGAAAC+GGG + Chr4:28878936-28878955 MsG0480019878.01.T01:intron 35.0%
! TTTTCCAAATTAGGTCCGTT+TGG - Chr4:28879214-28879233 None:intergenic 35.0%
!! AAATGGGTTTTGGCAATTCA+AGG - Chr4:28878827-28878846 None:intergenic 35.0%
!! AATCCATGGAAAATGGGTTT+TGG - Chr4:28878837-28878856 None:intergenic 35.0%
!! AGTACGATTTTGAAAAGCCA+AGG + Chr4:28877024-28877043 MsG0480019878.01.T01:intron 35.0%
!! TATAAAAGGTGGTGGAAACT+CGG + Chr4:28875708-28875727 MsG0480019878.01.T01:intron 35.0%
!! TCAATTTTTAAGAGAGGGAG+TGG - Chr4:28879142-28879161 None:intergenic 35.0%
!! TCTTCTAGGATTCTTATGGT+TGG + Chr4:28874902-28874921 MsG0480019878.01.T01:CDS 35.0%
!! TTTTGGGTATGTAGACAAAG+TGG - Chr4:28876677-28876696 None:intergenic 35.0%
!!! AAAAGGCATTTTTCCAGTTC+AGG - Chr4:28878299-28878318 None:intergenic 35.0%
!!! GCCTTTTTTCTTGCTATATG+TGG + Chr4:28878312-28878331 MsG0480019878.01.T01:intron 35.0%
!!! GGTAAGTACATTTTAGCTGA+GGG - Chr4:28877477-28877496 None:intergenic 35.0%
!!! TGGTAAGTACATTTTAGCTG+AGG - Chr4:28877478-28877497 None:intergenic 35.0%
AAGTAGTTTAGGCAACTGAG+TGG + Chr4:28877055-28877074 MsG0480019878.01.T01:intron 40.0%
AAGTGGGGTAAGAAAGGAAA+AGG - Chr4:28874950-28874969 None:intergenic 40.0%
ACAACATTAGAGGGAGAGTT+TGG + Chr4:28875672-28875691 MsG0480019878.01.T01:intron 40.0%
ACCTATCATAGAAAAGGTGG+TGG + Chr4:28876489-28876508 MsG0480019878.01.T01:intron 40.0%
ACCTATTCCTCTTACTGACA+AGG + Chr4:28879456-28879475 MsG0480019878.01.T01:CDS 40.0%
AGATATGCAGATGGATGTCA+GGG + Chr4:28877589-28877608 MsG0480019878.01.T01:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + Chr4:28876753-28876772 MsG0480019878.01.T01:intron 40.0%
ATGAGCATCACCGTAATCAT+AGG - Chr4:28874786-28874805 None:intergenic 40.0%
ATTACGGTGATGCTCATTAC+TGG + Chr4:28874789-28874808 MsG0480019878.01.T01:CDS 40.0%
CAAGTGTTTATAATTGCGGC+TGG + Chr4:28875311-28875330 MsG0480019878.01.T01:intron 40.0%
CCAAAAAAGTGGGGTAAGAA+AGG - Chr4:28874956-28874975 None:intergenic 40.0%
CCTATTCCTCTTACTGACAA+GGG + Chr4:28879457-28879476 MsG0480019878.01.T01:CDS 40.0%
CTAACTAGAGCTGACTAACA+TGG + Chr4:28875227-28875246 MsG0480019878.01.T01:intron 40.0%
CTACTTAGTTCGATAAGACC+TGG + Chr4:28876919-28876938 MsG0480019878.01.T01:intron 40.0%
GAATCAAAAAGTGGTCCAAG+AGG + Chr4:28879098-28879117 MsG0480019878.01.T01:intron 40.0%
GACACCTATCATAGAAAAGG+TGG + Chr4:28876486-28876505 MsG0480019878.01.T01:intron 40.0%
GACCAGTGATGTTATATGAG+AGG + Chr4:28876336-28876355 MsG0480019878.01.T01:intron 40.0%
GAGAAAGAGTGACGAAGAAA+AGG - Chr4:28874878-28874897 None:intergenic 40.0%
GCATACAATAAGCAATGCCA+AGG - Chr4:28878384-28878403 None:intergenic 40.0%
GTTGAACCAAGATTCGAACT+AGG - Chr4:28878767-28878786 None:intergenic 40.0%
TAGATATGCAGATGGATGTC+AGG + Chr4:28877588-28877607 MsG0480019878.01.T01:intron 40.0%
TCGATCTAGTCTCTACCAAA+CGG + Chr4:28879196-28879215 MsG0480019878.01.T01:intron 40.0%
TCTACCAAACGGACCTAATT+TGG + Chr4:28879207-28879226 MsG0480019878.01.T01:intron 40.0%
TGAATGTTAAGAGTCCCACT+TGG + Chr4:28875271-28875290 MsG0480019878.01.T01:intron 40.0%
TGCAGTTATATCGGAGGATA+TGG + Chr4:28877369-28877388 MsG0480019878.01.T01:CDS 40.0%
TGGATCATATACGAAGCAAG+GGG + Chr4:28878449-28878468 MsG0480019878.01.T01:intron 40.0%
TTACGGTGATGCTCATTACT+GGG + Chr4:28874790-28874809 MsG0480019878.01.T01:CDS 40.0%
TTAGTAAGGCCTAGCTCAAT+TGG + Chr4:28875764-28875783 MsG0480019878.01.T01:intron 40.0%
TTCAAAAGAGGAAACGGGAT+GGG + Chr4:28878941-28878960 MsG0480019878.01.T01:intron 40.0%
TTTGAACTTGAGGTTCTCCT+TGG + Chr4:28878364-28878383 MsG0480019878.01.T01:intron 40.0%
TTTGGTAGAGACTAGATCGA+GGG - Chr4:28879196-28879215 None:intergenic 40.0%
! AAGAGGGTGGTTCTTTTGAT+TGG + Chr4:28874828-28874847 MsG0480019878.01.T01:CDS 40.0%
! AGGATTCTTATGGTTGGTTG+TGG + Chr4:28874908-28874927 MsG0480019878.01.T01:CDS 40.0%
! CAATTGTGTGTGCGAGTTTT+AGG + Chr4:28875844-28875863 MsG0480019878.01.T01:intron 40.0%
! CAGCATTTTCCAATTGAGCT+AGG - Chr4:28875776-28875795 None:intergenic 40.0%
! CAGGTCTTATCGAACTAAGT+AGG - Chr4:28876921-28876940 None:intergenic 40.0%
! GATGTTTGGTGAGACTAGAT+GGG + Chr4:28876427-28876446 MsG0480019878.01.T01:intron 40.0%
! TAAGTGTAGTGGAGATGTGT+TGG + Chr4:28875612-28875631 MsG0480019878.01.T01:intron 40.0%
! TATACAGGTTTGCTTAGGTG+AGG - Chr4:28878222-28878241 None:intergenic 40.0%
! TCCACCACCTTTTCTATGAT+AGG - Chr4:28876493-28876512 None:intergenic 40.0%
! TTGCCAAAACCCATTTTCCA+TGG + Chr4:28878831-28878850 MsG0480019878.01.T01:intron 40.0%
!! AGCATCTGAGAAGCACTAAT+TGG - Chr4:28877920-28877939 None:intergenic 40.0%
!! ATAAAAGGTGGTGGAAACTC+GGG + Chr4:28875709-28875728 MsG0480019878.01.T01:intron 40.0%
!! ATGGTGTTGCATTGGATGTT+TGG + Chr4:28876413-28876432 MsG0480019878.01.T01:intron 40.0%
!! CATTCTGGCTTATGAAATCC+CGG - Chr4:28879406-28879425 None:intergenic 40.0%
!! CATTGCAGACTTCTAAAACC+TGG + Chr4:28878050-28878069 MsG0480019878.01.T01:intron 40.0%
!! TAGAAAAGGTGGTGGAAACT+CGG + Chr4:28876497-28876516 MsG0480019878.01.T01:intron 40.0%
!! TTTTGGGTCTGTAGACAAAG+TGG - Chr4:28875879-28875898 None:intergenic 40.0%
!! TTTTTAAGAGAGGGAGTGGA+AGG - Chr4:28879138-28879157 None:intergenic 40.0%
!!! CCTTTCTTACCCCACTTTTT+TGG + Chr4:28874953-28874972 MsG0480019878.01.T01:CDS 40.0%
AAGGAGAGTAGATCAGATGG+AGG + Chr4:28876756-28876775 MsG0480019878.01.T01:intron 45.0%
AATACTCGGCTTAGGTGGTT+TGG + Chr4:28875902-28875921 MsG0480019878.01.T01:intron 45.0%
ACACACAATTGCAAAGTCCC+AGG - Chr4:28875835-28875854 None:intergenic 45.0%
ACCAACATATAAGTCCCTCC+AGG - Chr4:28878071-28878090 None:intergenic 45.0%
ACCTGGAGGGACTTATATGT+TGG + Chr4:28878067-28878086 MsG0480019878.01.T01:intron 45.0%
AGGAGAGTAGATCAGATGGA+GGG + Chr4:28876757-28876776 MsG0480019878.01.T01:intron 45.0%
AGTAAGCCCTTGTCAGTAAG+AGG - Chr4:28879466-28879485 None:intergenic 45.0%
AGTCACCTCCCCTTCAAATT+GGG + Chr4:28879075-28879094 MsG0480019878.01.T01:intron 45.0%
ATAAGAGACGTAGTGTTCGG+TGG + Chr4:28875562-28875581 MsG0480019878.01.T01:intron 45.0%
ATACTCGGCTTAGGTGGTTT+GGG + Chr4:28875903-28875922 MsG0480019878.01.T01:intron 45.0%
ATGCCATCTCACTTCCAAGT+GGG - Chr4:28875288-28875307 None:intergenic 45.0%
CAATTCAAGGTTCATCCAGG+AGG - Chr4:28878814-28878833 None:intergenic 45.0%
CACCGTATGTAATCTGCAAG+AGG - Chr4:28878182-28878201 None:intergenic 45.0%
CAGTTCAGGAAAAGGCAGAA+GGG - Chr4:28878285-28878304 None:intergenic 45.0%
CATACGGTGATCCAACAGTA+CGG + Chr4:28878193-28878212 MsG0480019878.01.T01:CDS 45.0%
CCCTTGTCAGTAAGAGGAAT+AGG - Chr4:28879460-28879479 None:intergenic 45.0%
CGCCTCTTGCAGATTACATA+CGG + Chr4:28878177-28878196 MsG0480019878.01.T01:intron 45.0%
CTAATCCAACCCCACAAAAC+CGG - Chr4:28875352-28875371 None:intergenic 45.0%
GAAGGGAATCAAAACCCTCT+TGG - Chr4:28879116-28879135 None:intergenic 45.0%
GACAACCCTAGTTCGAATCT+TGG + Chr4:28878758-28878777 MsG0480019878.01.T01:intron 45.0%
GACGCTCGTTACATTCAAGA+GGG + Chr4:28874812-28874831 MsG0480019878.01.T01:CDS 45.0%
GATGTGTGGTAAGACTAGAC+GGG + Chr4:28875634-28875653 MsG0480019878.01.T01:intron 45.0%
GGATGTGTGGTAAGACTAGA+CGG + Chr4:28875633-28875652 MsG0480019878.01.T01:intron 45.0%
GGCAGAAGGGTGAAATCTTA+CGG - Chr4:28878272-28878291 None:intergenic 45.0%
GTAGCCTAAGCGTTCAAAGA+TGG + Chr4:28876082-28876101 MsG0480019878.01.T01:intron 45.0%
GTTCAAAAGAGGAAACGGGA+TGG + Chr4:28878940-28878959 MsG0480019878.01.T01:intron 45.0%
GTTTGGTAGAGACTAGATCG+AGG - Chr4:28879197-28879216 None:intergenic 45.0%
TACTGGGTGTGCAAGTCATT+AGG + Chr4:28875195-28875214 MsG0480019878.01.T01:intron 45.0%
TAGTCACCTCCCCTTCAAAT+TGG + Chr4:28879074-28879093 MsG0480019878.01.T01:intron 45.0%
TCAAGGGTTCCTAGATGCAT+CGG - Chr4:28877782-28877801 None:intergenic 45.0%
TCGCATACTCTTTGCAAGTC+AGG + Chr4:28878887-28878906 MsG0480019878.01.T01:intron 45.0%
TCGGAGGATATGGTCAAAGA+TGG + Chr4:28877379-28877398 MsG0480019878.01.T01:CDS 45.0%
TGCTGGGCCTCAAAATGTTT+GGG + Chr4:28876013-28876032 MsG0480019878.01.T01:intron 45.0%
TGGCAATTCAAGGTTCATCC+AGG - Chr4:28878817-28878836 None:intergenic 45.0%
TTGGTAGAGACTAGATCGAG+GGG - Chr4:28879195-28879214 None:intergenic 45.0%
! ACTAAGTGTAGCGGAGATGA+TGG + Chr4:28876394-28876413 MsG0480019878.01.T01:intron 45.0%
! AGATGCTTGCAGAAGTGTGT+AGG + Chr4:28877933-28877952 MsG0480019878.01.T01:intron 45.0%
! AGGTCTAGCTCAACTGGAAA+AGG + Chr4:28876568-28876587 MsG0480019878.01.T01:intron 45.0%
! ATATGAGAGGTAGTGTTGGG+TGG + Chr4:28876349-28876368 MsG0480019878.01.T01:intron 45.0%
! CAATCGTGTGTGCGAGTTTT+AGG + Chr4:28876642-28876661 MsG0480019878.01.T01:intron 45.0%
! CTGGTCTTTACCTTACAAGC+CGG + Chr4:28875330-28875349 MsG0480019878.01.T01:intron 45.0%
! GGATGTTTGGTGAGACTAGA+TGG + Chr4:28876426-28876445 MsG0480019878.01.T01:intron 45.0%
! GTTTGGTTCAAAAGAGGGGA+GGG + Chr4:28878980-28878999 MsG0480019878.01.T01:intron 45.0%
! TAGGTTGGACACTGACATCT+TGG + Chr4:28875803-28875822 MsG0480019878.01.T01:intron 45.0%
! TCAGTAAGGTCTAGCTCAAC+TGG + Chr4:28876562-28876581 MsG0480019878.01.T01:intron 45.0%
! TGACATCTTGGTTCGAACCT+GGG + Chr4:28875815-28875834 MsG0480019878.01.T01:intron 45.0%
! TGTTTGGTTCAAAAGAGGGG+AGG + Chr4:28878979-28878998 MsG0480019878.01.T01:intron 45.0%
! TTTGGTTCAAAAGAGGGGAG+GGG + Chr4:28878981-28879000 MsG0480019878.01.T01:intron 45.0%
!! ACCTTACAAGCCGGTTTTGT+GGG + Chr4:28875339-28875358 MsG0480019878.01.T01:intron 45.0%
!! GCAGACTTCTAAAACCTGGA+GGG + Chr4:28878054-28878073 MsG0480019878.01.T01:intron 45.0%
!! TACCTTACAAGCCGGTTTTG+TGG + Chr4:28875338-28875357 MsG0480019878.01.T01:intron 45.0%
!! TGCAGACTTCTAAAACCTGG+AGG + Chr4:28878053-28878072 MsG0480019878.01.T01:intron 45.0%
!!! TTGTGTGTGCGAGTTTTAGG+CGG + Chr4:28875847-28875866 MsG0480019878.01.T01:intron 45.0%
!! ATATATACAAAAAAAATATT+GGG - Chr4:28876041-28876060 None:intergenic 5.0%
AAAAGAGGAAACGGGATGGG+AGG + Chr4:28878944-28878963 MsG0480019878.01.T01:intron 50.0%
AACTCGCACACACGATTGCA+AGG - Chr4:28876640-28876659 None:intergenic 50.0%
AAGAGAGGGAGTGGAAGGAA+GGG - Chr4:28879133-28879152 None:intergenic 50.0%
AAGGAGAGTAGATCCGACCA+GGG + Chr4:28875958-28875977 MsG0480019878.01.T01:intron 50.0%
AGGGCTTACTACCAGCAGAT+TGG + Chr4:28879476-28879495 MsG0480019878.01.T01:CDS 50.0%
AGGTTGGACACTGCCATCTT+GGG + Chr4:28876602-28876621 MsG0480019878.01.T01:intron 50.0%
AGTCCCACTTGGAAGTGAGA+TGG + Chr4:28875282-28875301 MsG0480019878.01.T01:intron 50.0%
CAAGGGTTCCTAGATGCATC+GGG - Chr4:28877781-28877800 None:intergenic 50.0%
CATGCCATCTCACTTCCAAG+TGG - Chr4:28875289-28875308 None:intergenic 50.0%
CCAGTTCAGGAAAAGGCAGA+AGG - Chr4:28878286-28878305 None:intergenic 50.0%
CTTCATCCATGCAGCAAGAC+CGG + Chr4:28879384-28879403 MsG0480019878.01.T01:CDS 50.0%
GAACTAGGGGATCGAACACA+CGG - Chr4:28876115-28876134 None:intergenic 50.0%
GAGTAGATCAGATGGAGGGT+AGG + Chr4:28876761-28876780 MsG0480019878.01.T01:intron 50.0%
GATTCCCCAATTTGAAGGGG+AGG - Chr4:28879083-28879102 None:intergenic 50.0%
GCTCGTTACATTCAAGAGGG+TGG + Chr4:28874815-28874834 MsG0480019878.01.T01:CDS 50.0%
GCTGGGCCTCAAAATGTTTG+GGG + Chr4:28876014-28876033 MsG0480019878.01.T01:intron 50.0%
GGACGCTCGTTACATTCAAG+AGG + Chr4:28874811-28874830 MsG0480019878.01.T01:CDS 50.0%
GGGCTTACTACCAGCAGATT+GGG + Chr4:28879477-28879496 MsG0480019878.01.T01:CDS 50.0%
GTCACCTCCCCTTCAAATTG+GGG + Chr4:28879076-28879095 MsG0480019878.01.T01:intron 50.0%
GTGCTGGGCCTCAAAATGTT+TGG + Chr4:28876012-28876031 MsG0480019878.01.T01:intron 50.0%
GTGGAGATGTGTTGGATGTG+TGG + Chr4:28875620-28875639 MsG0480019878.01.T01:intron 50.0%
GTGGTAAGACTAGACGGGAT+AGG + Chr4:28875639-28875658 MsG0480019878.01.T01:intron 50.0%
TAAGAGAGGGAGTGGAAGGA+AGG - Chr4:28879134-28879153 None:intergenic 50.0%
TAAGGAGAGTAGATCCGACC+AGG + Chr4:28875957-28875976 MsG0480019878.01.T01:intron 50.0%
TCTTCCACAACCCAATCTGC+TGG - Chr4:28879490-28879509 None:intergenic 50.0%
TGATTGCACCTGTCTTGGGT+CGG - Chr4:28875984-28876003 None:intergenic 50.0%
TGCGCCATCTTTGAACGCTT+AGG - Chr4:28876089-28876108 None:intergenic 50.0%
TGTGGTATCCCGATGCATCT+AGG + Chr4:28877770-28877789 MsG0480019878.01.T01:intron 50.0%
TTCATCCATGCAGCAAGACC+GGG + Chr4:28879385-28879404 MsG0480019878.01.T01:CDS 50.0%
! ACTACCAGCAGATTGGGTTG+TGG + Chr4:28879483-28879502 MsG0480019878.01.T01:CDS 50.0%
! ATGGTTGGTTGTGGCAATGC+TGG + Chr4:28874917-28874936 MsG0480019878.01.T01:CDS 50.0%
! CCTTCTGCCTTTTCCTGAAC+TGG + Chr4:28878283-28878302 MsG0480019878.01.T01:CDS 50.0%
! CTGACATCTTGGTTCGAACC+TGG + Chr4:28875814-28875833 MsG0480019878.01.T01:intron 50.0%
! GTTTGGTTCAAGGGGAGTAG+AGG + Chr4:28879025-28879044 MsG0480019878.01.T01:intron 50.0%
! TAGGTTGGACACTGCCATCT+TGG + Chr4:28876601-28876620 MsG0480019878.01.T01:intron 50.0%
! TTGGGGCCCCAAACATTTTG+AGG - Chr4:28876023-28876042 None:intergenic 50.0%
!! CCTTACAAGCCGGTTTTGTG+GGG + Chr4:28875340-28875359 MsG0480019878.01.T01:intron 50.0%
!! CGGAGATGATGGTGTTGCAT+TGG + Chr4:28876405-28876424 MsG0480019878.01.T01:intron 50.0%
!! CGGTTTTGTGGGGTTGGATT+AGG + Chr4:28875350-28875369 MsG0480019878.01.T01:intron 50.0%
!!! ATTTTGAGGCCCAGCACCAT+AGG - Chr4:28876009-28876028 None:intergenic 50.0%
ACACACGATTGCAAGGTCCC+CGG - Chr4:28876633-28876652 None:intergenic 55.0%
ACTGCCATCTTGGGTCGAAC+CGG + Chr4:28876611-28876630 MsG0480019878.01.T01:intron 55.0%
AGGCCTGATTGCACCTGTCT+TGG - Chr4:28875989-28876008 None:intergenic 55.0%
GAAATCCCGGTCTTGCTGCA+TGG - Chr4:28879393-28879412 None:intergenic 55.0%
GACAGGTGCAATCAGGCCTA+TGG + Chr4:28875990-28876009 MsG0480019878.01.T01:intron 55.0%
GACCCAAGACAGGTGCAATC+AGG + Chr4:28875983-28876002 MsG0480019878.01.T01:intron 55.0%
GAGGGTAGGCAAATCGCTAG+GGG + Chr4:28876775-28876794 MsG0480019878.01.T01:intron 55.0%
GCAATCAGGCCTATGGTGCT+GGG + Chr4:28875997-28876016 MsG0480019878.01.T01:intron 55.0%
GGAGGGTAGGCAAATCGCTA+GGG + Chr4:28876774-28876793 MsG0480019878.01.T01:intron 55.0%
GGCCTGATTGCACCTGTCTT+GGG - Chr4:28875988-28876007 None:intergenic 55.0%
GTAGAGACTAGATCGAGGGG+AGG - Chr4:28879192-28879211 None:intergenic 55.0%
GTTCAAAAGAGGGGAGGGGA+GGG + Chr4:28878985-28879004 MsG0480019878.01.T01:intron 55.0%
TGCAATCAGGCCTATGGTGC+TGG + Chr4:28875996-28876015 MsG0480019878.01.T01:intron 55.0%
TGGAGGGTAGGCAAATCGCT+AGG + Chr4:28876773-28876792 MsG0480019878.01.T01:intron 55.0%
! AGGTGAGGCATCCGTACTGT+TGG - Chr4:28878207-28878226 None:intergenic 55.0%
!! ACAAGCCGGTTTTGTGGGGT+TGG + Chr4:28875344-28875363 MsG0480019878.01.T01:intron 55.0%
!! AGGTGGTGGAAACTCGGCTT+AGG + Chr4:28876503-28876522 MsG0480019878.01.T01:intron 55.0%
!! AGGTGGTGGAAACTCGGGTT+AGG + Chr4:28875714-28875733 MsG0480019878.01.T01:intron 55.0%
!! CCCCACAAAACCGGCTTGTA+AGG - Chr4:28875343-28875362 None:intergenic 55.0%
CTGCCATCTTGGGTCGAACC+GGG + Chr4:28876612-28876631 MsG0480019878.01.T01:intron 60.0%
GGTTCAAAAGAGGGGAGGGG+AGG + Chr4:28878984-28879003 MsG0480019878.01.T01:intron 60.0%
TGCCATCTTGGGTCGAACCG+GGG + Chr4:28876613-28876632 MsG0480019878.01.T01:intron 60.0%
TGTCTTGGGTCGGCCCTGGT+CGG - Chr4:28875974-28875993 None:intergenic 65.0%
! GTCCCCGGTTCGACCCAAGA+TGG - Chr4:28876618-28876637 None:intergenic 65.0%
CACCTGTCTTGGGTCGGCCC+TGG - Chr4:28875978-28875997 None:intergenic 70.0%
GACCAGGGCCGACCCAAGAC+AGG + Chr4:28875973-28875992 MsG0480019878.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 28874755 28879603 28874755 ID=MsG0480019878.01;Name=MsG0480019878.01
Chr4 mRNA 28874755 28879603 28874755 ID=MsG0480019878.01.T01;Parent=MsG0480019878.01;Name=MsG0480019878.01.T01;_AED=0.41;_eAED=0.52;_QI=0|0.25|0|1|0.25|0.2|5|0|298
Chr4 exon 28874755 28874974 28874755 ID=MsG0480019878.01.T01:exon:12031;Parent=MsG0480019878.01.T01
Chr4 exon 28877263 28877487 28877263 ID=MsG0480019878.01.T01:exon:12032;Parent=MsG0480019878.01.T01
Chr4 exon 28877591 28877646 28877591 ID=MsG0480019878.01.T01:exon:12033;Parent=MsG0480019878.01.T01
Chr4 exon 28878189 28878330 28878189 ID=MsG0480019878.01.T01:exon:12034;Parent=MsG0480019878.01.T01
Chr4 exon 28879350 28879603 28879350 ID=MsG0480019878.01.T01:exon:12035;Parent=MsG0480019878.01.T01
Chr4 CDS 28874755 28874974 28874755 ID=MsG0480019878.01.T01:cds;Parent=MsG0480019878.01.T01
Chr4 CDS 28877263 28877487 28877263 ID=MsG0480019878.01.T01:cds;Parent=MsG0480019878.01.T01
Chr4 CDS 28877591 28877646 28877591 ID=MsG0480019878.01.T01:cds;Parent=MsG0480019878.01.T01
Chr4 CDS 28878189 28878330 28878189 ID=MsG0480019878.01.T01:cds;Parent=MsG0480019878.01.T01
Chr4 CDS 28879350 28879603 28879350 ID=MsG0480019878.01.T01:cds;Parent=MsG0480019878.01.T01
Gene Sequence

>MsG0480019878.01.T01

ATGTTCAGAGACGTATCAAGTTGCAACACCTATGATTACGGTGATGCTCATTACTGGGACGCTCGTTACATTCAAGAGGGTGGTTCTTTTGATTGGTATCAGCGTTACTCTAATCTTAAACCTTTTCTTCGTCACTCTTTCTCTCTTTCTTCTAGGATTCTTATGGTTGGTTGTGGCAATGCTGGTAATAATCCTTTTCCTTTCTTACCCCACTTTTTTGTGTTATTGTCAATATTTTATAGTTCGCTATCTTGCTTGAATGTGATTTCTCTTTTATTGAGTCCACAATTTTTCAGAAAATTTACAAGGAGCAAACGGATGTATTTTGCAGTTATATCGGAGGATATGGTCAAAGATGGTTATGAGGAAATCGTGAATATTGATATTTCATCAGTTGCCATTGACATGATGAGAAAAAAACATGAGCGCATCCCTCAGCTAAAATATATGCAGATGGATGTCAGGGATATGAGCTTCTTTCCAGATGAATCTTTTGATGGTATTACATACGGTGATCCAACAGTACGGATGCCTCACCTAAGCAAACCTGTATACAATTGGAAAATTACATTGTATAATATCCGTAAGATTTCACCCTTCTGCCTTTTCCTGAACTGGAAAAATGCCTTTTTTCTTGCTATATCATTTATTCAGTGTTCATGTCGTGCTCACAATCTCTTCATCCATGCAGCAAGACCGGGATTTCATAAGCCAGAATGTAGTACTTCATCGAAGAAATCATTGTTGGAACCTATTCCTCTTACTGACAAGGGCTTACTACCAGCAGATTGGGTTGTGGAAGATCCAGATTCTCACTTTATATATGTTTGTAGAAAGGTAAATGACACAAACGGAGACGATATACCCGCATACCGATTAAACATTGATGTCTTATAG
Protein sequence

>MsG0480019878.01.T01

MFRDVSSCNTYDYGDAHYWDARYIQEGGSFDWYQRYSNLKPFLRHSFSLSSRILMVGCGNAGNNPFPFLPHFFVLLSIFYSSLSCLNVISLLLSPQFFRKFTRSKRMYFAVISEDMVKDGYEEIVNIDISSVAIDMMRKKHERIPQLKYMQMDVRDMSFFPDESFDGITYGDPTVRMPHLSKPVYNWKITLYNIRKISPFCLFLNWKNAFFLAISFIQCSCRAHNLFIHAARPGFHKPECSTSSKKSLLEPIPLTDKGLLPADWVVEDPDSHFIYVCRKVNDTNGDDIPAYRLNIDVL*