AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031488.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031488.01.T01 MTR_6g023885 94.144 222 13 0 30 251 1 222 9.49e-158 437
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031488.01.T01 AT5G02740 44.311 167 90 2 87 251 63 228 7.06e-48 158
MsG0680031488.01.T01 AT5G02740 43.802 121 66 1 87 205 63 183 5.28e-34 121

Find 60 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCATTTGATAGCAAATT+TGG 0.095832 6:-21129644 MsG0680031488.01.T01:CDS
TAAAAGTTATTATGTTTATT+TGG 0.111275 6:-21122793 MsG0680031488.01.T01:three_prime_UTR
CATGAAACTGTTTAAAATTA+TGG 0.144296 6:-21122737 MsG0680031488.01.T01:three_prime_UTR
GGAATACATTACATTGAAAT+TGG 0.161036 6:+21124964 None:intergenic
TAGAGATCGTGATCAAAATT+TGG 0.168917 6:-21129674 MsG0680031488.01.T01:CDS
ATCTTAACCAAGCAATAATT+TGG 0.214700 6:-21122692 MsG0680031488.01.T01:three_prime_UTR
AAGCTCACAATTTGCAGATT+TGG 0.261138 6:-21123296 MsG0680031488.01.T01:CDS
CTTCCGTCAATATGTTTCTA+AGG 0.276771 6:-21123240 MsG0680031488.01.T01:intron
AGAGATCGTGATCAAAATTT+GGG 0.286738 6:-21129673 MsG0680031488.01.T01:CDS
GACTCTGGACGATGTTAAAA+TGG 0.290012 6:-21125007 MsG0680031488.01.T01:CDS
AAAAGTTATTATGTTTATTT+GGG 0.290289 6:-21122792 MsG0680031488.01.T01:three_prime_UTR
CTTGGTTAAGATTCAAGATA+TGG 0.293728 6:+21122703 None:intergenic
GAAGGGTCGTTTGTACAAAT+TGG 0.308196 6:-21124181 MsG0680031488.01.T01:CDS
GGGTAATGAACCTGTTAAAA+TGG 0.314020 6:-21122979 MsG0680031488.01.T01:CDS
AATTTGCTATCAAATGAGTT+TGG 0.336129 6:+21129647 None:intergenic
CTCTTATCAGGTTTGACATA+TGG 0.371272 6:-21125099 MsG0680031488.01.T01:intron
GAATACATTACATTGAAATT+GGG 0.406056 6:+21124965 None:intergenic
TGTTTAAAATTATGGCAAAC+TGG 0.413523 6:-21122729 MsG0680031488.01.T01:three_prime_UTR
GATATCATCCACTTCCTTGA+AGG 0.414308 6:-21125039 MsG0680031488.01.T01:CDS
AATGCATTCATTGCAAAGAA+TGG 0.414470 6:-21122921 MsG0680031488.01.T01:CDS
TCATCGCTTGAATCTTTGAA+TGG 0.422254 6:+21122943 None:intergenic
TTAGGGTTTATTGTGGAAGA+TGG 0.436806 6:-21128769 MsG0680031488.01.T01:intron
AGATGAATCATATTCATAAC+CGG 0.458720 6:+21123261 None:intergenic
GAGTCAAATTACAACCTTCA+AGG 0.464292 6:+21125025 None:intergenic
TCAATTACCAAATTATTGCT+TGG 0.466712 6:+21122685 None:intergenic
ATGCATTCATTGCAAAGAAT+GGG 0.484499 6:-21122920 MsG0680031488.01.T01:CDS
ATGCTATACGCGTGATCGGA+AGG 0.491267 6:-21124203 MsG0680031488.01.T01:CDS
AATTACAACCTTCAAGGAAG+TGG 0.492625 6:+21125031 None:intergenic
ATCAGATTGATCGTTCTCAA+TGG 0.494096 6:-21124028 MsG0680031488.01.T01:intron
GATTTGGATCAGATCGTGTC+CGG 0.494292 6:-21123280 MsG0680031488.01.T01:CDS
AGTGCATTTCAGAGAAGTAA+TGG 0.496716 6:-21128702 MsG0680031488.01.T01:CDS
TCAGATTGATCGTTCTCAAT+GGG 0.498161 6:-21124027 MsG0680031488.01.T01:intron
TAGGGTTTATTGTGGAAGAT+GGG 0.498265 6:-21128768 MsG0680031488.01.T01:CDS
GACAATGCTATACGCGTGAT+CGG 0.498822 6:-21124207 MsG0680031488.01.T01:CDS
TGAAGGTTGTAATTTGACTC+TGG 0.499348 6:-21125022 MsG0680031488.01.T01:CDS
TTGTCATAGGCACTGTAAGT+AGG 0.501149 6:+21124225 None:intergenic
TCTGCAAATTGTGAGCTTCG+TGG 0.502879 6:+21123301 None:intergenic
GTCGTTTGTACAAATTGGAT+AGG 0.503719 6:-21124176 MsG0680031488.01.T01:CDS
CTTACAGTTCTTCCATCGTA+TGG 0.504695 6:+21123993 None:intergenic
TTCAGTAATTACAAGACTCA+TGG 0.530153 6:-21122860 MsG0680031488.01.T01:exon
CACGCGTATAGCATTGTCAT+AGG 0.533599 6:+21124212 None:intergenic
TGTCATAGGCACTGTAAGTA+GGG 0.535421 6:+21124226 None:intergenic
TAACCTTAGAAACATATTGA+CGG 0.538571 6:+21123237 None:intergenic
GTTTATTTGGGATTTCGTAA+CGG 0.544439 6:-21122780 MsG0680031488.01.T01:three_prime_UTR
TCGTTTGTACAAATTGGATA+GGG 0.546525 6:-21124175 MsG0680031488.01.T01:intron
ACTCATGGTGATGGTTCTGT+AGG 0.550697 6:-21122845 MsG0680031488.01.T01:three_prime_UTR
TATACGCGTGATCGGAAGGA+AGG 0.555284 6:-21124199 MsG0680031488.01.T01:CDS
TATCAGGTTTGACATATGGT+AGG 0.555665 6:-21125095 MsG0680031488.01.T01:intron
TGTGAATTTAGGGTTTATTG+TGG 0.569086 6:-21128776 MsG0680031488.01.T01:intron
TTGACATATGGTAGGCTGAT+CGG 0.575893 6:-21125087 MsG0680031488.01.T01:CDS
GTTTGTTTCAGAGCTGGAGA+GGG 0.593720 6:-21122999 MsG0680031488.01.T01:intron
TGAAGCTGAAAAGCCACCAC+AGG 0.618962 6:-21128655 MsG0680031488.01.T01:CDS
GCAGTTGTTGAATCCTGTGG+TGG 0.622224 6:+21128642 None:intergenic
TGTTTGTTTCAGAGCTGGAG+AGG 0.627343 6:-21123000 MsG0680031488.01.T01:intron
AATTACAAGACTCATGGTGA+TGG 0.631796 6:-21122854 MsG0680031488.01.T01:three_prime_UTR
GTATCGAAATGCGATTGTTG+AGG 0.635754 6:+21122889 None:intergenic
ATACGCGTGATCGGAAGGAA+GGG 0.636421 6:-21124198 MsG0680031488.01.T01:CDS
GTAGCAGTTGTTGAATCCTG+TGG 0.646615 6:+21128639 None:intergenic
GAGATCGTGATCAAAATTTG+GGG 0.665931 6:-21129672 MsG0680031488.01.T01:CDS
GACATCGTTACTCCATACGA+TGG 0.678013 6:-21124005 MsG0680031488.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTTCAATATCAAT+TGG + Chr6:21124888-21124907 None:intergenic 10.0%
!! AAAAGTTATTATGTTTATTT+GGG - Chr6:21129560-21129579 MsG0680031488.01.T01:intron 10.0%
!! AAACATTAAACAAATTAAAA+AGG + Chr6:21129300-21129319 None:intergenic 10.0%
!! AACATTAAACAAATTAAAAA+GGG + Chr6:21129299-21129318 None:intergenic 10.0%
!! ATATTTCAATTATACTAAAT+AGG + Chr6:21126458-21126477 None:intergenic 10.0%
!! CTTCAAAAAAAAAAAAAAAT+TGG + Chr6:21124745-21124764 None:intergenic 10.0%
!! TAAAAGTTATTATGTTTATT+TGG - Chr6:21129559-21129578 MsG0680031488.01.T01:intron 10.0%
!!! AAAATTCTTTATTTTCTTTA+GGG - Chr6:21125569-21125588 MsG0680031488.01.T01:intron 10.0%
!!! GTAATTTTTTCATATAAAAA+TGG - Chr6:21123472-21123491 MsG0680031488.01.T01:intron 10.0%
!!! TATTTTCTCTTTTTTTAATT+AGG - Chr6:21124454-21124473 MsG0680031488.01.T01:intron 10.0%
!!! TTTAAAATATCTTTGTAATT+TGG - Chr6:21124371-21124390 MsG0680031488.01.T01:intron 10.0%
!! AAAAAAAAAAAAATTGGACA+CGG + Chr6:21124739-21124758 None:intergenic 15.0%
!! AAAAAAAAATTGATTAGCAA+AGG + Chr6:21128401-21128420 None:intergenic 15.0%
!! AAAAATTAAAAAAGCAGTAA+TGG - Chr6:21122829-21122848 MsG0680031488.01.T01:three_prime_UTR 15.0%
!! ATATTTATGGTGATAAAAAT+GGG - Chr6:21123529-21123548 MsG0680031488.01.T01:intron 15.0%
!! TAAATAATGTTATTAGTATC+AGG + Chr6:21127179-21127198 None:intergenic 15.0%
!! TATATATATATATATGAGTC+AGG + Chr6:21123025-21123044 None:intergenic 15.0%
!! TCTAGATTAAACTAATTTAA+TGG - Chr6:21122952-21122971 MsG0680031488.01.T01:CDS 15.0%
!! TTAAAATTAATTGTATGACA+TGG + Chr6:21123941-21123960 None:intergenic 15.0%
!!! AATTGTTTTAAGACTTTAAT+GGG - Chr6:21123856-21123875 MsG0680031488.01.T01:intron 15.0%
!!! ATTAAATTAGTTTAATCTAG+AGG + Chr6:21122953-21122972 None:intergenic 15.0%
!!! ATTATTTTTGATATAGATGA+TGG - Chr6:21128658-21128677 MsG0680031488.01.T01:CDS 15.0%
!!! CATATAGTTTTACAAATTTA+TGG - Chr6:21127019-21127038 MsG0680031488.01.T01:intron 15.0%
!!! GAAAATTCTTTATTTTCTTT+AGG - Chr6:21125568-21125587 MsG0680031488.01.T01:intron 15.0%
!!! TATTTTCTCTTGTTTTAATT+AGG - Chr6:21124247-21124266 MsG0680031488.01.T01:intron 15.0%
!!! TCAAATTTTAATATTCGAAT+GGG - Chr6:21123149-21123168 MsG0680031488.01.T01:intron 15.0%
!!! TTAAAATATATTTGATTTGG+TGG - Chr6:21124173-21124192 MsG0680031488.01.T01:intron 15.0%
!!! TTACTGCTTTTTTAATTTTT+TGG + Chr6:21122829-21122848 None:intergenic 15.0%
!!! TTCAAATTTTAATATTCGAA+TGG - Chr6:21123148-21123167 MsG0680031488.01.T01:intron 15.0%
!!! TTTAAAATATCTTTGTGATT+TGG - Chr6:21123956-21123975 MsG0680031488.01.T01:intron 15.0%
!!! TTTTTTATACTCATTATCAT+AGG - Chr6:21125072-21125091 MsG0680031488.01.T01:CDS 15.0%
!! AAAATATCTTTGTAATTTGG+TGG - Chr6:21124374-21124393 MsG0680031488.01.T01:intron 20.0%
!! AAATAAATCAAGAGGTAATA+AGG - Chr6:21122876-21122895 MsG0680031488.01.T01:CDS 20.0%
!! ACACATAAATATTGAAAACA+AGG - Chr6:21127101-21127120 MsG0680031488.01.T01:intron 20.0%
!! AGAAAATAGTTATTCTTTGA+TGG - Chr6:21128426-21128445 MsG0680031488.01.T01:intron 20.0%
!! CTATTCCTAAAAAAAAACTA+AGG - Chr6:21127928-21127947 MsG0680031488.01.T01:intron 20.0%
!! CTGTTAAATAATTCATCAAT+AGG + Chr6:21128473-21128492 None:intergenic 20.0%
!! GAATACATTACATTGAAATT+GGG + Chr6:21127390-21127409 None:intergenic 20.0%
!! GATATTTATGGTGATAAAAA+TGG - Chr6:21123528-21123547 MsG0680031488.01.T01:intron 20.0%
!! TATGAAGCAAAATGAAAAAT+GGG + Chr6:21123440-21123459 None:intergenic 20.0%
!! TATGTTTGGATTGAATAATT+AGG - Chr6:21125625-21125644 MsG0680031488.01.T01:intron 20.0%
!! TATTTATGGTGATAAAAATG+GGG - Chr6:21123530-21123549 MsG0680031488.01.T01:intron 20.0%
!! TTAAAATAAGTTGTATGACA+TGG + Chr6:21124157-21124176 None:intergenic 20.0%
!! TTAAAATTAGTTGTACAACA+TGG + Chr6:21124356-21124375 None:intergenic 20.0%
!! TTAAACATTTACAGTATGTT+TGG - Chr6:21125611-21125630 MsG0680031488.01.T01:intron 20.0%
!! TTGAACACCTAAAAAAAATA+GGG + Chr6:21123133-21123152 None:intergenic 20.0%
!! TTTGAACACCTAAAAAAAAT+AGG + Chr6:21123134-21123153 None:intergenic 20.0%
!!! AATTTTCCCTTATGATTATT+AGG - Chr6:21125512-21125531 MsG0680031488.01.T01:intron 20.0%
!!! AGGATTGTTATTGTTAATAT+TGG - Chr6:21124267-21124286 MsG0680031488.01.T01:intron 20.0%
!!! ATATTGTTAATAGACTAGTT+GGG - Chr6:21123271-21123290 MsG0680031488.01.T01:CDS 20.0%
!!! CATGAAACTGTTTAAAATTA+TGG - Chr6:21129615-21129634 MsG0680031488.01.T01:intron 20.0%
!!! CTTAATTTGATTGTAAGTTA+GGG - Chr6:21122733-21122752 MsG0680031488.01.T01:three_prime_UTR 20.0%
!!! GAATTGTTTTAAGACTTTAA+TGG - Chr6:21123855-21123874 MsG0680031488.01.T01:intron 20.0%
!!! GATTGTTATTGTTAATATTG+GGG - Chr6:21124269-21124288 MsG0680031488.01.T01:intron 20.0%
!!! GATTTTTGTTGTTAATATTC+GGG - Chr6:21124476-21124495 MsG0680031488.01.T01:intron 20.0%
!!! GATTTTTTCATTCTTTTCAT+TGG - Chr6:21128300-21128319 MsG0680031488.01.T01:intron 20.0%
!!! GGATTGTTATTGTTAATATT+GGG - Chr6:21124268-21124287 MsG0680031488.01.T01:intron 20.0%
!!! GGATTTTTGTTGTTAATATT+CGG - Chr6:21124475-21124494 MsG0680031488.01.T01:intron 20.0%
!!! GTGATAATTGATTTAGTAAA+AGG + Chr6:21128839-21128858 None:intergenic 20.0%
!!! TAATGTCTTTTACTAAATAG+AGG - Chr6:21125445-21125464 MsG0680031488.01.T01:intron 20.0%
!!! TAATTGAATCAAAGTATCAT+AGG + Chr6:21128642-21128661 None:intergenic 20.0%
!!! TATATTTTTCCTTTATTAGC+AGG + Chr6:21128602-21128621 None:intergenic 20.0%
!!! TCTTAATTTGATTGTAAGTT+AGG - Chr6:21122732-21122751 MsG0680031488.01.T01:three_prime_UTR 20.0%
!!! TCTTTTCCTAAAAATATGTA+AGG + Chr6:21126318-21126337 None:intergenic 20.0%
!!! TTAAAGTTATGTTGGATTTT+TGG - Chr6:21123813-21123832 MsG0680031488.01.T01:intron 20.0%
!!! TTAATTTGATTGTAAGTTAG+GGG - Chr6:21122734-21122753 MsG0680031488.01.T01:three_prime_UTR 20.0%
!!! TTTTACGATTTTACGATTAA+CGG + Chr6:21125813-21125832 None:intergenic 20.0%
!!! TTTTGCTAGATTTTAATTGA+AGG - Chr6:21129024-21129043 MsG0680031488.01.T01:intron 20.0%
! AAAGGGGGAAAAAATAAAAA+GGG - Chr6:21128232-21128251 MsG0680031488.01.T01:intron 25.0%
! AAAGTAAAGGATCTATTCTA+AGG + Chr6:21125013-21125032 None:intergenic 25.0%
! AAATACCAACAATTATAGTC+AGG + Chr6:21126919-21126938 None:intergenic 25.0%
! AAATATTGATCACCAATTGT+TGG - Chr6:21126533-21126552 MsG0680031488.01.T01:intron 25.0%
! AACTTTAATCGTAAAATCGT+AGG + Chr6:21125729-21125748 None:intergenic 25.0%
! AATATTGATCACCAATTGTT+GGG - Chr6:21126534-21126553 MsG0680031488.01.T01:intron 25.0%
! AGAGAAAAAACAGAAAATAG+AGG - Chr6:21126712-21126731 MsG0680031488.01.T01:intron 25.0%
! AGATGAATCATATTCATAAC+CGG + Chr6:21129094-21129113 None:intergenic 25.0%
! ATAAAAGATCGTAAACATGA+GGG - Chr6:21126640-21126659 MsG0680031488.01.T01:intron 25.0%
! ATACAAACAAATCCACAAAA+AGG + Chr6:21123774-21123793 None:intergenic 25.0%
! ATCTTAACCAAGCAATAATT+TGG - Chr6:21129660-21129679 MsG0680031488.01.T01:CDS 25.0%
! ATTTCAATATCAATTGGACA+CGG + Chr6:21124882-21124901 None:intergenic 25.0%
! ATTTGACAATACTGAATACA+GGG - Chr6:21127784-21127803 MsG0680031488.01.T01:intron 25.0%
! CATATTGTTAATAGACTAGT+TGG - Chr6:21123270-21123289 MsG0680031488.01.T01:CDS 25.0%
! CGTAATGAAAAACTAAACAT+CGG + Chr6:21127554-21127573 None:intergenic 25.0%
! CTAATTTAATGGTTGAGATT+TGG - Chr6:21122963-21122982 MsG0680031488.01.T01:CDS 25.0%
! CTATGAAGCAAAATGAAAAA+TGG + Chr6:21123441-21123460 None:intergenic 25.0%
! CTATTTGTCTCAAAAAGTAA+AGG + Chr6:21125026-21125045 None:intergenic 25.0%
! GAATAACTTAAGAAATGCTA+TGG + Chr6:21126396-21126415 None:intergenic 25.0%
! GGAATACATTACATTGAAAT+TGG + Chr6:21127391-21127410 None:intergenic 25.0%
! GTATAAGGAAATAAATCAAG+AGG - Chr6:21122868-21122887 MsG0680031488.01.T01:exon 25.0%
! GTATATCATGAAACAGAAAA+AGG - Chr6:21127848-21127867 MsG0680031488.01.T01:intron 25.0%
! TAACCTTAGAAACATATTGA+CGG + Chr6:21129118-21129137 None:intergenic 25.0%
! TAATACCTAAAGCAATATAC+TGG - Chr6:21126980-21126999 MsG0680031488.01.T01:intron 25.0%
! TACAAACAAATCCACAAAAA+GGG + Chr6:21123773-21123792 None:intergenic 25.0%
! TATTTGACAATACTGAATAC+AGG - Chr6:21127783-21127802 MsG0680031488.01.T01:intron 25.0%
! TCAATTACCAAATTATTGCT+TGG + Chr6:21129670-21129689 None:intergenic 25.0%
! TCCTAGAATTATGTATGTAA+GGG - Chr6:21125135-21125154 MsG0680031488.01.T01:intron 25.0%
! TGCATTAAACAAGATCATAT+AGG + Chr6:21128955-21128974 None:intergenic 25.0%
! TGTATAAGCTATACAACTTA+TGG - Chr6:21127901-21127920 MsG0680031488.01.T01:intron 25.0%
! TTAAGATGAGACAAATTTAG+CGG + Chr6:21128044-21128063 None:intergenic 25.0%
! TTGTTAAATAGCAGATATAG+TGG + Chr6:21128919-21128938 None:intergenic 25.0%
! TTTAAATTCTGCTACACTAT+AGG - Chr6:21127638-21127657 MsG0680031488.01.T01:intron 25.0%
! TTTCACAAAAACCATATGAT+TGG - Chr6:21127574-21127593 MsG0680031488.01.T01:intron 25.0%
! TTTGGATTGAATAATTAGGA+GGG - Chr6:21125629-21125648 MsG0680031488.01.T01:intron 25.0%
!! AAAAAAGCAGTAATGGAATA+TGG - Chr6:21122836-21122855 MsG0680031488.01.T01:three_prime_UTR 25.0%
!! AAAATATCTTTGTGATTTGG+TGG - Chr6:21123959-21123978 MsG0680031488.01.T01:intron 25.0%
!! AACAATTTGCTCAACAAATA+AGG + Chr6:21124592-21124611 None:intergenic 25.0%
!! AACTCATTTGATAGCAAATT+TGG - Chr6:21122708-21122727 MsG0680031488.01.T01:three_prime_UTR 25.0%
!! ACAATTTGCTCAACAAATAA+GGG + Chr6:21124591-21124610 None:intergenic 25.0%
!! CAATAATAAAGATGATAGTG+AGG + Chr6:21126573-21126592 None:intergenic 25.0%
!! TATCTGCTATTTAACAACAA+TGG - Chr6:21128922-21128941 MsG0680031488.01.T01:intron 25.0%
!! TGTTTAAAATTATGGCAAAC+TGG - Chr6:21129623-21129642 MsG0680031488.01.T01:intron 25.0%
!! TGTTTTGTGATGTGAATTTA+GGG - Chr6:21123566-21123585 MsG0680031488.01.T01:intron 25.0%
!! TTTTATACTGTCATCGAATA+AGG - Chr6:21124118-21124137 MsG0680031488.01.T01:intron 25.0%
!!! AATTTGCTATCAAATGAGTT+TGG + Chr6:21122708-21122727 None:intergenic 25.0%
!!! CAGTGCATCTTTTATTTTTT+TGG - Chr6:21124029-21124048 MsG0680031488.01.T01:intron 25.0%
!!! CATCTTTTATTTTTTTGGCT+TGG - Chr6:21124034-21124053 MsG0680031488.01.T01:intron 25.0%
!!! GATGTCCTTAGTTTTTTTTT+AGG + Chr6:21127936-21127955 None:intergenic 25.0%
!!! GCTTGATTTTAAAGTTATGT+TGG - Chr6:21123805-21123824 MsG0680031488.01.T01:intron 25.0%
!!! TTGTTTTGTGATGTGAATTT+AGG - Chr6:21123565-21123584 MsG0680031488.01.T01:intron 25.0%
AAAAAAGATGCCATTCACTT+AGG + Chr6:21127489-21127508 None:intergenic 30.0%
AAGCAAAATGAAAAATGGGT+TGG + Chr6:21123436-21123455 None:intergenic 30.0%
AAGGGGGAAAAAATAAAAAG+GGG - Chr6:21128233-21128252 MsG0680031488.01.T01:intron 30.0%
AATGCATTCATTGCAAAGAA+TGG - Chr6:21129431-21129450 MsG0680031488.01.T01:intron 30.0%
ACAACATAACTCCAATCATA+TGG + Chr6:21127588-21127607 None:intergenic 30.0%
ACCCTTACATACATAATTCT+AGG + Chr6:21125139-21125158 None:intergenic 30.0%
ACTCACATAACATAACAACA+TGG + Chr6:21126121-21126140 None:intergenic 30.0%
AGAAAATAGAGGAAAAACAG+AGG - Chr6:21126723-21126742 MsG0680031488.01.T01:intron 30.0%
AGAGATCGTGATCAAAATTT+GGG - Chr6:21122679-21122698 MsG0680031488.01.T01:three_prime_UTR 30.0%
ATAATTAGGAGGGAAAAGAT+TGG - Chr6:21125639-21125658 MsG0680031488.01.T01:intron 30.0%
ATACAACAGCAATGATTTGA+AGG + Chr6:21126370-21126389 None:intergenic 30.0%
ATATTGATCACCAATTGTTG+GGG - Chr6:21126535-21126554 MsG0680031488.01.T01:intron 30.0%
ATGCATTCATTGCAAAGAAT+GGG - Chr6:21129432-21129451 MsG0680031488.01.T01:intron 30.0%
ATGTTAGCTCAAAAACCAAA+AGG + Chr6:21124550-21124569 None:intergenic 30.0%
ATTCAAGGGAAAAAACAGTT+TGG + Chr6:21123058-21123077 None:intergenic 30.0%
CAAAAACACTGAGAAAATAG+AGG - Chr6:21126753-21126772 MsG0680031488.01.T01:intron 30.0%
CAATTCGGACTATAGAAAAT+AGG - Chr6:21123213-21123232 MsG0680031488.01.T01:intron 30.0%
CCTTGTATTTCTCCAATATA+GGG - Chr6:21125398-21125417 MsG0680031488.01.T01:intron 30.0%
CTTCCTCCTAATAATCATAA+GGG + Chr6:21125521-21125540 None:intergenic 30.0%
CTTGGTTAAGATTCAAGATA+TGG + Chr6:21129652-21129671 None:intergenic 30.0%
GAAAGGGGGAAAAAATAAAA+AGG - Chr6:21128231-21128250 MsG0680031488.01.T01:intron 30.0%
GAATTGGTTGTATCCAAAAA+AGG + Chr6:21123743-21123762 None:intergenic 30.0%
GATAAAAGATCGTAAACATG+AGG - Chr6:21126639-21126658 MsG0680031488.01.T01:intron 30.0%
GATATAGTCATAATCCTTCA+AGG + Chr6:21125753-21125772 None:intergenic 30.0%
GCATATAAAATAGCATACGT+AGG + Chr6:21126191-21126210 None:intergenic 30.0%
GCCTAAAAAAAGACAAAAGA+CGG + Chr6:21127412-21127431 None:intergenic 30.0%
GGATCATGAGAAAACAAAAA+TGG - Chr6:21122798-21122817 MsG0680031488.01.T01:three_prime_UTR 30.0%
GTCCTAGAATTATGTATGTA+AGG - Chr6:21125134-21125153 MsG0680031488.01.T01:intron 30.0%
GTTTGGATTGAATAATTAGG+AGG - Chr6:21125628-21125647 MsG0680031488.01.T01:intron 30.0%
TAAGCACATGTGAAAATGTT+CGG + Chr6:21127984-21128003 None:intergenic 30.0%
TAATTAGGAGGGAAAAGATT+GGG - Chr6:21125640-21125659 MsG0680031488.01.T01:intron 30.0%
TAGAGATCGTGATCAAAATT+TGG - Chr6:21122678-21122697 MsG0680031488.01.T01:three_prime_UTR 30.0%
TATGAATTCTGTACAATCCT+AGG - Chr6:21126225-21126244 MsG0680031488.01.T01:intron 30.0%
TCAAACCAGTATATTGCTTT+AGG + Chr6:21126988-21127007 None:intergenic 30.0%
TCCTTGTATTTCTCCAATAT+AGG - Chr6:21125397-21125416 MsG0680031488.01.T01:intron 30.0%
TCGTTTGTACAAATTGGATA+GGG - Chr6:21128177-21128196 MsG0680031488.01.T01:intron 30.0%
TCTTCCTCCTAATAATCATA+AGG + Chr6:21125522-21125541 None:intergenic 30.0%
TGATTTGAACTGGCAATATT+TGG + Chr6:21128736-21128755 None:intergenic 30.0%
TGTTAGCTCAAAAACCAAAA+GGG + Chr6:21124549-21124568 None:intergenic 30.0%
TTCAGTAATTACAAGACTCA+TGG - Chr6:21129492-21129511 MsG0680031488.01.T01:intron 30.0%
TTCCATATTCTTCCCTATAT+TGG + Chr6:21125413-21125432 None:intergenic 30.0%
TTCTGTTTCATGATATACCT+CGG + Chr6:21127846-21127865 None:intergenic 30.0%
TTGAAAATTATAGTCACACG+CGG - Chr6:21128493-21128512 MsG0680031488.01.T01:intron 30.0%
TTTCCCTTATGATTATTAGG+AGG - Chr6:21125515-21125534 MsG0680031488.01.T01:intron 30.0%
TTTCTATTATCCCCAACAAT+TGG + Chr6:21126548-21126567 None:intergenic 30.0%
TTTGAATTAAGTAGAACACC+TGG - Chr6:21126508-21126527 MsG0680031488.01.T01:intron 30.0%
! GTTTATTTGGGATTTCGTAA+CGG - Chr6:21129572-21129591 MsG0680031488.01.T01:intron 30.0%
! TCCGTCTTTTGTCTTTTTTT+AGG - Chr6:21127408-21127427 MsG0680031488.01.T01:intron 30.0%
! TGATTTGCATTATCATCAGA+AGG - Chr6:21125194-21125213 MsG0680031488.01.T01:intron 30.0%
! TGTCATTTATGCATACCTAA+CGG - Chr6:21125478-21125497 MsG0680031488.01.T01:intron 30.0%
! TGTGAATTTAGGGTTTATTG+TGG - Chr6:21123576-21123595 MsG0680031488.01.T01:intron 30.0%
! TTACAATTCTCTGAAGATGA+TGG - Chr6:21129324-21129343 MsG0680031488.01.T01:intron 30.0%
! TTGGTGATCAATATTTATCC+AGG + Chr6:21126529-21126548 None:intergenic 30.0%
! TTGTTTCTTTCAAAGCTCTT+TGG - Chr6:21127507-21127526 MsG0680031488.01.T01:intron 30.0%
! TTTTTGGATACAACCAATTC+AGG - Chr6:21123743-21123762 MsG0680031488.01.T01:intron 30.0%
!! ATACAGGATTTCACTGATTT+AGG + Chr6:21125782-21125801 None:intergenic 30.0%
!! ATTTCACTGATTTAGGATTC+TGG + Chr6:21125775-21125794 None:intergenic 30.0%
!! TACATACATAATTCTAGGAC+AGG + Chr6:21125134-21125153 None:intergenic 30.0%
!! TTGAAGTTTTTGCTATCATC+AGG - Chr6:21128092-21128111 MsG0680031488.01.T01:intron 30.0%
!! TTGACAACATTGATTTGAAC+TGG + Chr6:21128746-21128765 None:intergenic 30.0%
!!! ACCATTGCTTTTTCAATCAA+TGG - Chr6:21128548-21128567 MsG0680031488.01.T01:intron 30.0%
!!! ACTGTTTTTTCCCTTGAATA+TGG - Chr6:21123059-21123078 MsG0680031488.01.T01:intron 30.0%
!!! CAGGTTCAAGTTTTTAAGTA+GGG - Chr6:21126606-21126625 MsG0680031488.01.T01:intron 30.0%
!!! CTGTTTTTTCCCTTGAATAT+GGG - Chr6:21123060-21123079 MsG0680031488.01.T01:intron 30.0%
!!! GAACACACCCTATTTTTTTT+AGG - Chr6:21123123-21123142 MsG0680031488.01.T01:intron 30.0%
!!! TATTTTTTCCCCCTTTCTTT+TGG + Chr6:21128228-21128247 None:intergenic 30.0%
!!! TCAGGTTCAAGTTTTTAAGT+AGG - Chr6:21126605-21126624 MsG0680031488.01.T01:intron 30.0%
AAAATGTTCGGGAGAACTTA+TGG + Chr6:21127972-21127991 None:intergenic 35.0%
AAACTTGAACCTGACTACAT+TGG + Chr6:21126599-21126618 None:intergenic 35.0%
AAATATCTGACCAATAGCAG+GGG + Chr6:21124974-21124993 None:intergenic 35.0%
AACTTTGCATTGGGAAACAT+AGG + Chr6:21129269-21129288 None:intergenic 35.0%
AAGAAGGGGAAAACTCAATT+CGG - Chr6:21123198-21123217 MsG0680031488.01.T01:intron 35.0%
AAGCACATGTGAAAATGTTC+GGG + Chr6:21127983-21128002 None:intergenic 35.0%
AAGCTCACAATTTGCAGATT+TGG - Chr6:21129056-21129075 MsG0680031488.01.T01:intron 35.0%
AAGTATATCCTATACGACAC+TGG + Chr6:21125322-21125341 None:intergenic 35.0%
AATCGTAAAATCCACGATCT+TGG - Chr6:21125823-21125842 MsG0680031488.01.T01:intron 35.0%
AATTACAACCTTCAAGGAAG+TGG + Chr6:21127324-21127343 None:intergenic 35.0%
AATTACAAGACTCATGGTGA+TGG - Chr6:21129498-21129517 MsG0680031488.01.T01:intron 35.0%
AATTGCACTAATCATCCGTT+AGG + Chr6:21125496-21125515 None:intergenic 35.0%
AGAAATATCTGACCAATAGC+AGG + Chr6:21124976-21124995 None:intergenic 35.0%
AGAATCGTTACATGAATCCT+AGG + Chr6:21126245-21126264 None:intergenic 35.0%
AGGAAAAACAGAGTAAACAG+AGG - Chr6:21126773-21126792 MsG0680031488.01.T01:intron 35.0%
AGTCGAATTCCTGCTAATAA+AGG - Chr6:21128590-21128609 MsG0680031488.01.T01:intron 35.0%
AGTGCATTTCAGAGAAGTAA+TGG - Chr6:21123650-21123669 MsG0680031488.01.T01:intron 35.0%
ATACCTCTTGCCAAAAGAAA+GGG - Chr6:21128215-21128234 MsG0680031488.01.T01:intron 35.0%
ATATGGAGAGAGAACGTATA+AGG - Chr6:21122853-21122872 MsG0680031488.01.T01:three_prime_UTR 35.0%
ATCAGATTGATCGTTCTCAA+TGG - Chr6:21128324-21128343 MsG0680031488.01.T01:intron 35.0%
ATTTGCTCAACAAATAAGGG+TGG + Chr6:21124588-21124607 None:intergenic 35.0%
CAAGTGACAACTAAATGCTA+TGG + Chr6:21126418-21126437 None:intergenic 35.0%
CATGATATACCTCGGTAATT+GGG + Chr6:21127838-21127857 None:intergenic 35.0%
CCATGCTATGACTATCAAAA+TGG + Chr6:21127434-21127453 None:intergenic 35.0%
CCCTATATTGGAGAAATACA+AGG + Chr6:21125401-21125420 None:intergenic 35.0%
CCTAAAAATATGTAAGGCGT+AGG + Chr6:21126312-21126331 None:intergenic 35.0%
CTACGCATTGTAGTCAAAAT+GGG - Chr6:21125686-21125705 MsG0680031488.01.T01:intron 35.0%
CTAGTTTAAGTGCATCATGT+TGG - Chr6:21126018-21126037 MsG0680031488.01.T01:intron 35.0%
CTCCAATATAGGGAAGAATA+TGG - Chr6:21125408-21125427 MsG0680031488.01.T01:intron 35.0%
CTCTTATCAGGTTTGACATA+TGG - Chr6:21127253-21127272 MsG0680031488.01.T01:intron 35.0%
GAAATATCTGACCAATAGCA+GGG + Chr6:21124975-21124994 None:intergenic 35.0%
GAGAAAATAGAAGATGCACT+CGG + Chr6:21124236-21124255 None:intergenic 35.0%
GAGATCGTGATCAAAATTTG+GGG - Chr6:21122680-21122699 MsG0680031488.01.T01:three_prime_UTR 35.0%
GAGTCAAATTACAACCTTCA+AGG + Chr6:21127330-21127349 None:intergenic 35.0%
GCATTTATTGCCTAAGTGAA+TGG - Chr6:21127476-21127495 MsG0680031488.01.T01:intron 35.0%
GCTATAGCATTGTAATGTAG+CGG + Chr6:21128804-21128823 None:intergenic 35.0%
GGGTAATGAACCTGTTAAAA+TGG - Chr6:21129373-21129392 MsG0680031488.01.T01:intron 35.0%
GGTCATGTTAACTTTGCATT+GGG + Chr6:21129278-21129297 None:intergenic 35.0%
GTCAAACCTGATAAGAGAAT+GGG + Chr6:21127250-21127269 None:intergenic 35.0%
GTCGTTTGTACAAATTGGAT+AGG - Chr6:21128176-21128195 MsG0680031488.01.T01:intron 35.0%
GTCTCACAAGTTACTAAAAC+AGG + Chr6:21125977-21125996 None:intergenic 35.0%
GTGTCGTATAGGATATACTT+TGG - Chr6:21125322-21125341 MsG0680031488.01.T01:intron 35.0%
TAATATTGGGGAAATTGCAC+TGG - Chr6:21124281-21124300 MsG0680031488.01.T01:intron 35.0%
TACGATTAAAGTTGCCTTGA+AGG - Chr6:21125736-21125755 MsG0680031488.01.T01:intron 35.0%
TACGCATTGTAGTCAAAATG+GGG - Chr6:21125687-21125706 MsG0680031488.01.T01:intron 35.0%
TAGGGTTTATTGTGGAAGAT+GGG - Chr6:21123584-21123603 MsG0680031488.01.T01:intron 35.0%
TATACCTCTTGCCAAAAGAA+AGG - Chr6:21128214-21128233 MsG0680031488.01.T01:intron 35.0%
TATCAGGTTTGACATATGGT+AGG - Chr6:21127257-21127276 MsG0680031488.01.T01:intron 35.0%
TCAGATTGATCGTTCTCAAT+GGG - Chr6:21128325-21128344 MsG0680031488.01.T01:intron 35.0%
TCATCGCTTGAATCTTTGAA+TGG + Chr6:21129412-21129431 None:intergenic 35.0%
TCATGATATACCTCGGTAAT+TGG + Chr6:21127839-21127858 None:intergenic 35.0%
TCGATCCTGACTATAATTGT+TGG - Chr6:21126911-21126930 MsG0680031488.01.T01:intron 35.0%
TGAAAATTATAGTCACACGC+GGG - Chr6:21128494-21128513 MsG0680031488.01.T01:intron 35.0%
TGAAGGTTGTAATTTGACTC+TGG - Chr6:21127330-21127349 MsG0680031488.01.T01:intron 35.0%
TGATCTGATTTCACTGTAGA+TGG - Chr6:21122761-21122780 MsG0680031488.01.T01:three_prime_UTR 35.0%
TGTCAAACCTGATAAGAGAA+TGG + Chr6:21127251-21127270 None:intergenic 35.0%
TTAGGGTTTATTGTGGAAGA+TGG - Chr6:21123583-21123602 MsG0680031488.01.T01:intron 35.0%
TTATTGTTGCCAATGTAGTC+AGG - Chr6:21126587-21126606 MsG0680031488.01.T01:intron 35.0%
TTCTTAACATGTGCCTTTGA+GGG + Chr6:21129187-21129206 None:intergenic 35.0%
TTGGTTGTATCCAAAAAAGG+AGG + Chr6:21123740-21123759 None:intergenic 35.0%
TTGTCAAATAACGACTACAG+TGG + Chr6:21127773-21127792 None:intergenic 35.0%
TTTCTTAACATGTGCCTTTG+AGG + Chr6:21129188-21129207 None:intergenic 35.0%
! AACGGCTTTTGTTAATGAGA+TGG - Chr6:21129590-21129609 MsG0680031488.01.T01:intron 35.0%
! AATGACACATACAACCCTTT+TGG - Chr6:21124532-21124551 MsG0680031488.01.T01:intron 35.0%
! AATTGAGTTTTCCCCTTCTT+TGG + Chr6:21123198-21123217 None:intergenic 35.0%
! ATGGATCGATTTCAAATCGT+GGG - Chr6:21125911-21125930 MsG0680031488.01.T01:intron 35.0%
! ATTAACGGATGCGATTATAC+AGG + Chr6:21125798-21125817 None:intergenic 35.0%
! ATTCAGGTATACCCTTTTTG+TGG - Chr6:21123759-21123778 MsG0680031488.01.T01:intron 35.0%
! ATTCTCTCTGGTGTCAATTT+AGG + Chr6:21124784-21124803 None:intergenic 35.0%
! ATTGAGTTTTCCCCTTCTTT+GGG + Chr6:21123197-21123216 None:intergenic 35.0%
! CAAAAAGGGTATACCTGAAT+TGG + Chr6:21123759-21123778 None:intergenic 35.0%
! CATTTTCCAAGTGAAAACGA+AGG + Chr6:21128277-21128296 None:intergenic 35.0%
! CCTACGCCTTACATATTTTT+AGG - Chr6:21126309-21126328 MsG0680031488.01.T01:intron 35.0%
! CTTCCGTCAATATGTTTCTA+AGG - Chr6:21129112-21129131 MsG0680031488.01.T01:intron 35.0%
! GAAATGAGAAAAGAAGCGTA+GGG + Chr6:21123338-21123357 None:intergenic 35.0%
! GATGTGAAACTGTTTTACAC+TGG - Chr6:21124006-21124025 MsG0680031488.01.T01:CDS 35.0%
! GCAGATTGATGGTTTCTTAT+CGG + Chr6:21124334-21124353 None:intergenic 35.0%
! GCCATTGATTGAAAAAGCAA+TGG + Chr6:21128552-21128571 None:intergenic 35.0%
! TACGATCTTTTATCAGCCTA+CGG + Chr6:21126633-21126652 None:intergenic 35.0%
! TACTTTGTTTGTTTCAGAGC+TGG - Chr6:21129347-21129366 MsG0680031488.01.T01:intron 35.0%
! TAGTAACTTGTGAGACTTTC+TGG - Chr6:21125981-21126000 MsG0680031488.01.T01:intron 35.0%
! TGAAATGAGAAAAGAAGCGT+AGG + Chr6:21123339-21123358 None:intergenic 35.0%
! TGTTTTCCCATTCTCTTATC+AGG - Chr6:21127241-21127260 MsG0680031488.01.T01:intron 35.0%
! TTTCTTCCTTCGTTTTCACT+TGG - Chr6:21128268-21128287 MsG0680031488.01.T01:intron 35.0%
!! CCATTTTGATAGTCATAGCA+TGG - Chr6:21127431-21127450 MsG0680031488.01.T01:intron 35.0%
!! GATTTGGTGGAATACATCAT+TGG - Chr6:21124186-21124205 MsG0680031488.01.T01:CDS 35.0%
!! TCAGAGAAGTAATGGTTTTG+TGG - Chr6:21123658-21123677 MsG0680031488.01.T01:intron 35.0%
!! TTTTGATAGTCATAGCATGG+TGG - Chr6:21127434-21127453 MsG0680031488.01.T01:intron 35.0%
!!! CGTATTGTTGCCATTTTAAC+AGG + Chr6:21129386-21129405 None:intergenic 35.0%
!!! TTTGGCTTGGTTTTTGTGAA+AGG - Chr6:21124047-21124066 MsG0680031488.01.T01:intron 35.0%
AAAATAGGACGCGCAAGAAA+TGG - Chr6:21123228-21123247 MsG0680031488.01.T01:intron 40.0%
AAATAGGACGCGCAAGAAAT+GGG - Chr6:21123229-21123248 MsG0680031488.01.T01:intron 40.0%
AAATATGTAAGGCGTAGGAG+AGG + Chr6:21126307-21126326 None:intergenic 40.0%
AACACCGAACAGATGAAAAC+AGG - Chr6:21126808-21126827 MsG0680031488.01.T01:intron 40.0%
AACACCTGTTAGAAACGTCT+TGG - Chr6:21124924-21124943 MsG0680031488.01.T01:intron 40.0%
AATAGGACACTGCTACGTAT+TGG + Chr6:21126441-21126460 None:intergenic 40.0%
ACACCGAACAGATGAAAACA+GGG - Chr6:21126809-21126828 MsG0680031488.01.T01:intron 40.0%
ACACGCGGGATAATAAACTA+TGG - Chr6:21128508-21128527 MsG0680031488.01.T01:intron 40.0%
AGAAACCCGTTTCAGTAACT+CGG - Chr6:21125938-21125957 MsG0680031488.01.T01:intron 40.0%
AGACAAATTTAGCGGCTGTT+TGG + Chr6:21128036-21128055 None:intergenic 40.0%
AGCGACTATTGTTGTGCTAT+AGG + Chr6:21127664-21127683 None:intergenic 40.0%
AGGTAGTCAAAATCCGTAAG+AGG + Chr6:21126287-21126306 None:intergenic 40.0%
ATGGCTATTCCTCATTTCAG+AGG - Chr6:21128567-21128586 MsG0680031488.01.T01:intron 40.0%
CATCTACTAAGTGATGTGTC+AGG - Chr6:21124642-21124661 MsG0680031488.01.T01:intron 40.0%
CCCTTGAATATGGGTGTTTA+CGG - Chr6:21123069-21123088 MsG0680031488.01.T01:intron 40.0%
CCGTAAACACCCATATTCAA+GGG + Chr6:21123072-21123091 None:intergenic 40.0%
CCTACGCATTGTAGTCAAAA+TGG - Chr6:21125685-21125704 MsG0680031488.01.T01:intron 40.0%
CCTTGAATATGGGTGTTTAC+GGG - Chr6:21123070-21123089 MsG0680031488.01.T01:intron 40.0%
CGTAGCAGAAAAAATCGAAC+AGG - Chr6:21123384-21123403 MsG0680031488.01.T01:intron 40.0%
CTTACAGTTCTTCCATCGTA+TGG + Chr6:21128362-21128381 None:intergenic 40.0%
GAAGGGTCGTTTGTACAAAT+TGG - Chr6:21128171-21128190 MsG0680031488.01.T01:intron 40.0%
GACTCTGGACGATGTTAAAA+TGG - Chr6:21127345-21127364 MsG0680031488.01.T01:intron 40.0%
GATATCATCCACTTCCTTGA+AGG - Chr6:21127313-21127332 MsG0680031488.01.T01:intron 40.0%
GGGAAGAATATGGAACATAG+AGG - Chr6:21125418-21125437 MsG0680031488.01.T01:intron 40.0%
GGGTCATGTTAACTTTGCAT+TGG + Chr6:21129279-21129298 None:intergenic 40.0%
GTATCGAAATGCGATTGTTG+AGG + Chr6:21129466-21129485 None:intergenic 40.0%
TAAAATCCACGATCTTGGAG+TGG - Chr6:21125828-21125847 MsG0680031488.01.T01:intron 40.0%
TACCTCTTGCCAAAAGAAAG+GGG - Chr6:21128216-21128235 MsG0680031488.01.T01:intron 40.0%
TAGTCAAAATCCGTAAGAGG+AGG + Chr6:21126284-21126303 None:intergenic 40.0%
TGCAACTTTACCTCCTCTTA+CGG - Chr6:21126271-21126290 MsG0680031488.01.T01:intron 40.0%
TGGAGTTATGTTGTCAATCG+CGG - Chr6:21127594-21127613 MsG0680031488.01.T01:intron 40.0%
TGTACAACATGGCAGATTGA+TGG + Chr6:21124345-21124364 None:intergenic 40.0%
TGTATGACATGGCAGATTGA+TGG + Chr6:21123930-21123949 None:intergenic 40.0%
TTGACATATGGTAGGCTGAT+CGG - Chr6:21127265-21127284 MsG0680031488.01.T01:intron 40.0%
TTTCTGCTACGATCGTTCAA+AGG + Chr6:21123375-21123394 None:intergenic 40.0%
! ATTTTTCACCCCCCAAAGAA+GGG - Chr6:21123183-21123202 MsG0680031488.01.T01:intron 40.0%
! GATGGATCGATTTCAAATCG+TGG - Chr6:21125910-21125929 MsG0680031488.01.T01:intron 40.0%
! TATTTTTCACCCCCCAAAGA+AGG - Chr6:21123182-21123201 MsG0680031488.01.T01:intron 40.0%
! TCTCTGGTGTCAATTTAGGT+GGG + Chr6:21124780-21124799 None:intergenic 40.0%
! TGTCATAGGCACTGTAAGTA+GGG + Chr6:21128129-21128148 None:intergenic 40.0%
! TTGAGTTTTCCCCTTCTTTG+GGG + Chr6:21123196-21123215 None:intergenic 40.0%
! TTGCCCTGTTTTCATCTGTT+CGG + Chr6:21126815-21126834 None:intergenic 40.0%
! TTGTCATAGGCACTGTAAGT+AGG + Chr6:21128130-21128149 None:intergenic 40.0%
!! AATTCGACTCCTCTGAAATG+AGG + Chr6:21128579-21128598 None:intergenic 40.0%
!! AGGGTGTGTTCTTTGCTTTT+CGG + Chr6:21123114-21123133 None:intergenic 40.0%
!! ATGTTAACTTGTGCCCTCAA+AGG - Chr6:21129171-21129190 MsG0680031488.01.T01:intron 40.0%
!!! AACTGCTACACCTCCTTTTT+TGG - Chr6:21123727-21123746 MsG0680031488.01.T01:intron 40.0%
!!! AGTTTTTAAGTAGGGTCCGT+AGG - Chr6:21126614-21126633 MsG0680031488.01.T01:intron 40.0%
!!! CCATTTTGACTACAATGCGT+AGG + Chr6:21125688-21125707 None:intergenic 40.0%
AATAGGACGCGCAAGAAATG+GGG - Chr6:21123230-21123249 MsG0680031488.01.T01:intron 45.0%
ACCTAGTCGCTGCTATCTAT+TGG - Chr6:21127142-21127161 MsG0680031488.01.T01:intron 45.0%
ACCTCTTGCCAAAAGAAAGG+GGG - Chr6:21128217-21128236 MsG0680031488.01.T01:intron 45.0%
AGGAGGGAAAAGATTGGGTT+TGG - Chr6:21125645-21125664 MsG0680031488.01.T01:intron 45.0%
ATCGTGCTTCGACTTTACTC+AGG + Chr6:21126845-21126864 None:intergenic 45.0%
CAACAAATAAGGGTGGTGAC+TGG + Chr6:21124581-21124600 None:intergenic 45.0%
CACGCGTATAGCATTGTCAT+AGG + Chr6:21128143-21128162 None:intergenic 45.0%
CCCGTAAACACCCATATTCA+AGG + Chr6:21123073-21123092 None:intergenic 45.0%
CTTGACCCGAGTTACTGAAA+CGG + Chr6:21125947-21125966 None:intergenic 45.0%
GAAACCCGTTTCAGTAACTC+GGG - Chr6:21125939-21125958 MsG0680031488.01.T01:intron 45.0%
GACAATGCTATACGCGTGAT+CGG - Chr6:21128145-21128164 MsG0680031488.01.T01:intron 45.0%
GACATCGTTACTCCATACGA+TGG - Chr6:21128347-21128366 MsG0680031488.01.T01:intron 45.0%
GAGTGTCTAGCACATGTTCA+AGG + Chr6:21124712-21124731 None:intergenic 45.0%
GATTTGGATCAGATCGTGTC+CGG - Chr6:21129072-21129091 MsG0680031488.01.T01:intron 45.0%
GCAAATGATCCCAATTACCG+AGG - Chr6:21127826-21127845 MsG0680031488.01.T01:intron 45.0%
GCATCCAAGACGTTTCTAAC+AGG + Chr6:21124931-21124950 None:intergenic 45.0%
GCTATAGCACAGCTGCTTAT+GGG + Chr6:21128887-21128906 None:intergenic 45.0%
GGAGGGAAAAGATTGGGTTT+GGG - Chr6:21125646-21125665 MsG0680031488.01.T01:intron 45.0%
GTAAAGTCGAAGCACGATTG+AGG - Chr6:21126847-21126866 MsG0680031488.01.T01:intron 45.0%
GTAGCAGTTGTTGAATCCTG+TGG + Chr6:21123716-21123735 None:intergenic 45.0%
GTGGAATACAAGCTGCTCAT+TGG - Chr6:21123978-21123997 MsG0680031488.01.T01:intron 45.0%
GTTGTGTTCCAGTGTCGTAT+AGG - Chr6:21125311-21125330 MsG0680031488.01.T01:intron 45.0%
GTTTGTTTCAGAGCTGGAGA+GGG - Chr6:21129353-21129372 MsG0680031488.01.T01:intron 45.0%
TAAGTGCATCATGTTGGTGC+TGG - Chr6:21126024-21126043 MsG0680031488.01.T01:intron 45.0%
TAGATGGCGAGAGAAGAGAA+AGG - Chr6:21122777-21122796 MsG0680031488.01.T01:three_prime_UTR 45.0%
TCAACGAATTCGTTGACACC+TGG - Chr6:21122988-21123007 MsG0680031488.01.T01:CDS 45.0%
TCTGCAAATTGTGAGCTTCG+TGG + Chr6:21129054-21129073 None:intergenic 45.0%
TGCTATAGCACAGCTGCTTA+TGG + Chr6:21128888-21128907 None:intergenic 45.0%
TGTTTGTTTCAGAGCTGGAG+AGG - Chr6:21129352-21129371 MsG0680031488.01.T01:intron 45.0%
TTATAGTCAGGATCGAGTGC+TGG + Chr6:21126907-21126926 None:intergenic 45.0%
TTCAAGGTGTGTCCAAGAAG+TGG + Chr6:21124696-21124715 None:intergenic 45.0%
TTGACCCGAGTTACTGAAAC+GGG + Chr6:21125946-21125965 None:intergenic 45.0%
! AGACTTTAATGGGCATGCAC+TGG - Chr6:21123866-21123885 MsG0680031488.01.T01:intron 45.0%
! ATGTTGTCAATCGCGGATTG+CGG - Chr6:21127601-21127620 MsG0680031488.01.T01:intron 45.0%
! CTCTCTGGTGTCAATTTAGG+TGG + Chr6:21124781-21124800 None:intergenic 45.0%
! GTTACTGAAACGGGTTTCTC+TGG + Chr6:21125937-21125956 None:intergenic 45.0%
! TGAGTTTTCCCCTTCTTTGG+GGG + Chr6:21123195-21123214 None:intergenic 45.0%
! TTTTTCACCCCCCAAAGAAG+GGG - Chr6:21123184-21123203 MsG0680031488.01.T01:intron 45.0%
!! AACGACTACAGTGGTGCTAT+AGG + Chr6:21127764-21127783 None:intergenic 45.0%
!! ACTCATGGTGATGGTTCTGT+AGG - Chr6:21129507-21129526 MsG0680031488.01.T01:intron 45.0%
!! CACTCTAGGGTTAGGAAAGA+TGG - Chr6:21125892-21125911 MsG0680031488.01.T01:intron 45.0%
!! TCGCTGCTATCTATTGGCTT+TGG - Chr6:21127148-21127167 MsG0680031488.01.T01:intron 45.0%
!!! AATATAAATTTTGAAATTAT+TGG - Chr6:21126473-21126492 MsG0680031488.01.T01:intron 5.0%
!!! AATTTTTATATTGATATTTA+TGG - Chr6:21123516-21123535 MsG0680031488.01.T01:intron 5.0%
!!! ATTTTAAAATATATTTGATT+TGG - Chr6:21124170-21124189 MsG0680031488.01.T01:intron 5.0%
!!! GTATATATTATTTTTTTAAT+TGG - Chr6:21129145-21129164 MsG0680031488.01.T01:intron 5.0%
AGGCATGTTAGACGCGATTC+AGG - Chr6:21124662-21124681 MsG0680031488.01.T01:intron 50.0%
ATACGCGTGATCGGAAGGAA+GGG - Chr6:21128154-21128173 MsG0680031488.01.T01:intron 50.0%
ATAGGACGCGCAAGAAATGG+GGG - Chr6:21123231-21123250 MsG0680031488.01.T01:intron 50.0%
ATCGAAGAAGTGAAGTGGGG+TGG + Chr6:21123314-21123333 None:intergenic 50.0%
ATGCTATACGCGTGATCGGA+AGG - Chr6:21128149-21128168 MsG0680031488.01.T01:intron 50.0%
GATCCCAAGCCAATACCACT+AGG - Chr6:21124838-21124857 MsG0680031488.01.T01:intron 50.0%
GCAGTTGTTGAATCCTGTGG+TGG + Chr6:21123713-21123732 None:intergenic 50.0%
GCCAATAGATAGCAGCGACT+AGG + Chr6:21127146-21127165 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCTC+TGG + Chr6:21124796-21124815 None:intergenic 50.0%
GTGTGTCCAAGAAGTGGTGT+CGG + Chr6:21124690-21124709 None:intergenic 50.0%
TACCACTGCAACCTGGAATG+CGG + Chr6:21125857-21125876 None:intergenic 50.0%
TATACGCGTGATCGGAAGGA+AGG - Chr6:21128153-21128172 MsG0680031488.01.T01:intron 50.0%
TCGAAGAAGTGAAGTGGGGT+GGG + Chr6:21123313-21123332 None:intergenic 50.0%
TGAAGCTGAAAAGCCACCAC+AGG - Chr6:21123697-21123716 MsG0680031488.01.T01:intron 50.0%
TGGACACGGTTAACCCACTT+GGG + Chr6:21124868-21124887 None:intergenic 50.0%
TTGGACACGGTTAACCCACT+TGG + Chr6:21124869-21124888 None:intergenic 50.0%
! AAGCACGATTGAGGTGCCAT+GGG - Chr6:21126856-21126875 MsG0680031488.01.T01:intron 50.0%
! CTTTAATGGGCATGCACTGG+CGG - Chr6:21123869-21123888 MsG0680031488.01.T01:intron 50.0%
! GAGTTTTCCCCTTCTTTGGG+GGG + Chr6:21123194-21123213 None:intergenic 50.0%
! GGCATCGAAGAAGTGAAGTG+GGG + Chr6:21123317-21123336 None:intergenic 50.0%
! TCCCCCTTTCTTTTGGCAAG+AGG + Chr6:21128221-21128240 None:intergenic 50.0%
! TCGTTGACACCTGGTGTCAA+CGG - Chr6:21122997-21123016 MsG0680031488.01.T01:intron 50.0%
!! AGGGCATCGAAGAAGTGAAG+TGG + Chr6:21123319-21123338 None:intergenic 50.0%
!! AGTGGTATTGGCTTGGGATC+TGG + Chr6:21124838-21124857 None:intergenic 50.0%
!! GGGCATCGAAGAAGTGAAGT+GGG + Chr6:21123318-21123337 None:intergenic 50.0%
!! GTGGTATTGGCTTGGGATCT+GGG + Chr6:21124837-21124856 None:intergenic 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + Chr6:21124844-21124863 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + Chr6:21124845-21124864 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + Chr6:21124850-21124869 None:intergenic 50.0%
!!! TGGGGTGGGCTTTTGGTTTT+GGG + Chr6:21123299-21123318 None:intergenic 50.0%
ACCACTAGGCCAACCCAAGT+GGG - Chr6:21124852-21124871 MsG0680031488.01.T01:intron 55.0%
ACTGAGCTGACCCCTGCTAT+TGG - Chr6:21124961-21124980 MsG0680031488.01.T01:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG + Chr6:21123009-21123028 None:intergenic 55.0%
CACGGTTAACCCACTTGGGT+TGG + Chr6:21124864-21124883 None:intergenic 55.0%
CGACTTCTACCACTGCAACC+TGG + Chr6:21125864-21125883 None:intergenic 55.0%
CGGAATCCACTCCAAGATCG+TGG + Chr6:21125837-21125856 None:intergenic 55.0%
GAATCGAACCTGAGACCTCG+AGG - Chr6:21124800-21124819 MsG0680031488.01.T01:intron 55.0%
TACCACTAGGCCAACCCAAG+TGG - Chr6:21124851-21124870 MsG0680031488.01.T01:intron 55.0%
TCGTACGATCCTACGTCCCA+TGG + Chr6:21126875-21126894 None:intergenic 55.0%
TGCAGTGGTAGAAGTCGCGA+CGG - Chr6:21125867-21125886 MsG0680031488.01.T01:intron 55.0%
TTCCGCATTCCAGGTTGCAG+TGG - Chr6:21125852-21125871 MsG0680031488.01.T01:intron 55.0%
! ATTGAGGTGCCATGGGACGT+AGG - Chr6:21126863-21126882 MsG0680031488.01.T01:intron 55.0%
! GAAGCACGATTGAGGTGCCA+TGG - Chr6:21126855-21126874 MsG0680031488.01.T01:intron 55.0%
! TGGAGTGGATTCCGCATTCC+AGG - Chr6:21125843-21125862 MsG0680031488.01.T01:intron 55.0%
!! AGTGAAGTGGGGTGGGCTTT+TGG + Chr6:21123306-21123325 None:intergenic 55.0%
!!! GGGGTGGGCTTTTGGTTTTG+GGG + Chr6:21123298-21123317 None:intergenic 55.0%
!!! GGGTGGGCTTTTGGTTTTGG+GGG + Chr6:21123297-21123316 None:intergenic 55.0%
!!! GTGGGGTGGGCTTTTGGTTT+TGG + Chr6:21123300-21123319 None:intergenic 55.0%
AAGTCGCGACGGTGCACTCT+AGG - Chr6:21125878-21125897 MsG0680031488.01.T01:intron 60.0%
AGTCGCGACGGTGCACTCTA+GGG - Chr6:21125879-21125898 MsG0680031488.01.T01:intron 60.0%
CAGGGGTCAGCTCAGTCTCT+TGG + Chr6:21124957-21124976 None:intergenic 60.0%
GACGCGCAAGAAATGGGGGT+GGG - Chr6:21123235-21123254 MsG0680031488.01.T01:intron 60.0%
TCGAACCTGAGACCTCGAGG+AGG - Chr6:21124803-21124822 MsG0680031488.01.T01:intron 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG + Chr6:21124856-21124875 None:intergenic 60.0%
!! CAGGCACCGACACCACTTCT+TGG - Chr6:21124681-21124700 MsG0680031488.01.T01:intron 60.0%
!! CGACGGTGCACTCTAGGGTT+AGG - Chr6:21125884-21125903 MsG0680031488.01.T01:intron 60.0%
GGACGCGCAAGAAATGGGGG+TGG - Chr6:21123234-21123253 MsG0680031488.01.T01:intron 65.0%
GTGCTCCTCCTCGAGGTCTC+AGG + Chr6:21124811-21124830 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCTCG+AGG + Chr6:21124818-21124837 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 21122673 21129701 21122673 ID=MsG0680031488.01;Name=MsG0680031488.01
Chr6 mRNA 21122673 21129701 21122673 ID=MsG0680031488.01.T01;Parent=MsG0680031488.01;Name=MsG0680031488.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.83|0.85|0.85|1|1|7|202|251
Chr6 exon 21122673 21123010 21122673 ID=MsG0680031488.01.T01:exon:13412;Parent=MsG0680031488.01.T01
Chr6 exon 21123241 21123341 21123241 ID=MsG0680031488.01.T01:exon:13411;Parent=MsG0680031488.01.T01
Chr6 exon 21123998 21124045 21123998 ID=MsG0680031488.01.T01:exon:13410;Parent=MsG0680031488.01.T01
Chr6 exon 21124176 21124260 21124176 ID=MsG0680031488.01.T01:exon:13409;Parent=MsG0680031488.01.T01
Chr6 exon 21124976 21125111 21124976 ID=MsG0680031488.01.T01:exon:13408;Parent=MsG0680031488.01.T01
Chr6 exon 21128610 21128787 21128610 ID=MsG0680031488.01.T01:exon:13407;Parent=MsG0680031488.01.T01
Chr6 exon 21129630 21129701 21129630 ID=MsG0680031488.01.T01:exon:13406;Parent=MsG0680031488.01.T01
Chr6 CDS 21129630 21129701 21129630 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21128610 21128787 21128610 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21124976 21125111 21124976 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21124176 21124260 21124176 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21123998 21124045 21123998 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21123241 21123341 21123241 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 CDS 21122875 21123010 21122875 ID=MsG0680031488.01.T01:cds;Parent=MsG0680031488.01.T01
Chr6 three_prime_UTR 21122673 21122874 21122673 ID=MsG0680031488.01.T01:three_prime_utr;Parent=MsG0680031488.01.T01
Gene Sequence

>MsG0680031488.01.T01

ATGATTAGAGATCGTGATCAAAATTTGGGGTTCCAAACTCATTTGATAGCAAATTTGGATCTTAATTTGATTGGTTTATTGTGGAAGATGGGTAGTGTTGTAAGAGCTACATTGAAGAAAACAAACTGTAGTGTTAGTGCATTTCAGAGAAGTAATGGTTTTGTGGCTAGATTCTTCTCTACTGAAGCTGAAAAGCCACCACAGGATTCAACAACTGCTACACCTCCTTTTTTGGATACAACCAATTCAGGTTTGACATATGGTAGGCTGATCGGTGTTCATAGACATGCACTCAAAACAGATATCATCCACTTCCTTGAAGGTTGTAATTTGACTCTGGACGATGTTAAAATGGAGTACACTCGTAGCTTCAACCCAATTTCAATGATGTTGCAGTTCCCTACTTACAGTGCCTATGACAATGCTATACGCGTGATCGGAAGGAAGGGTCGTTTGTACAAATTGGATAGGATTGATCGTTCTCAATGGGACATCGTTACTCCATACGATGGAAGAACTATTTTAATTGAAGGACTTCCACGAAGCTCACAATTTGCAGATTTGGATCAGATCGTGTCCGGTTATGAATATGATTCATCTTCCGTCAATATGTTTCTAAGAGCTGGAGAGGGTAATGAACCTGTTAAAATGGCAACAATACGTTTCCATTCAAAGATTCAAGCGATGAATGCATTCATTGCAAAGAATGGGACATATTGCCTCAACAATCGCATTTCGATACATGTTCTTCAGTAA

Protein sequence

>MsG0680031488.01.T01

MIRDRDQNLGFQTHLIANLDLNLIGLLWKMGSVVRATLKKTNCSVSAFQRSNGFVARFFSTEAEKPPQDSTTATPPFLDTTNSGLTYGRLIGVHRHALKTDIIHFLEGCNLTLDDVKMEYTRSFNPISMMLQFPTYSAYDNAIRVIGRKGRLYKLDRIDRSQWDIVTPYDGRTILIEGLPRSSQFADLDQIVSGYEYDSSSVNMFLRAGEGNEPVKMATIRFHSKIQAMNAFIAKNGTYCLNNRISIHVLQ*