AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019892.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019892.01.T01 MTR_0003s0460 75.475 1211 109 12 1 1026 1 1208 0.0 1646
MsG0480019892.01.T01 MTR_1g069910 67.208 924 232 10 2 858 6 925 0.0 1056
MsG0480019892.01.T01 MTR_1g069910 57.209 215 38 2 866 1026 1002 1216 1.43e-61 229
MsG0480019892.01.T01 MTR_1g058610 61.056 303 83 4 302 570 306 607 6.63e-101 331
MsG0480019892.01.T01 MTR_1g059520 52.312 346 81 6 574 886 1 295 1.32e-67 229
MsG0480019892.01.T01 MTR_8g072890 23.775 959 601 28 6 873 16 935 1.51e-34 144
MsG0480019892.01.T01 MTR_8g037325 24.086 930 571 33 6 852 3 880 1.27e-32 137
MsG0480019892.01.T01 MTR_7g091420 32.278 158 99 2 6 155 11 168 1.16e-19 93.2
MsG0480019892.01.T01 MTR_1g051825 23.670 752 445 28 6 678 27 728 3.39e-18 90.9
MsG0480019892.01.T01 MTR_1g051825 23.670 752 445 28 6 678 3 704 3.57e-18 90.9
MsG0480019892.01.T01 MTR_7g091430 31.250 144 93 5 481 620 159 300 8.31e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019892.01.T01 AT3G54670 54.555 922 349 9 4 858 9 927 0.0 883
MsG0480019892.01.T01 AT3G54670 47.082 257 75 4 824 1026 969 1218 2.35e-54 207
MsG0480019892.01.T01 AT3G47460 23.693 899 572 29 6 833 3 858 4.65e-35 145
MsG0480019892.01.T01 AT3G47460 23.614 902 572 29 6 833 3 861 2.15e-34 143
MsG0480019892.01.T01 AT5G62410 24.459 924 537 34 6 833 3 861 1.85e-31 134
MsG0480019892.01.T01 AT5G48600 27.221 349 209 8 6 321 26 362 2.05e-23 108
MsG0480019892.01.T01 AT5G48600 27.221 349 209 8 6 321 26 362 2.21e-23 107

Find 180 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCGTGGTTCTCAATTAA+AGG 0.176409 4:-29065028 MsG0480019892.01.T01:CDS
CGTTGCTATGGGTAAATTAA+TGG 0.191276 4:-29063601 MsG0480019892.01.T01:CDS
GGAAGATTCTTCAAATTTCT+TGG 0.242859 4:+29063203 None:intergenic
TGCTTTAAAGAATGACTTAA+AGG 0.250570 4:-29062684 MsG0480019892.01.T01:CDS
GACGCTATCTGCTTTGTTCT+TGG 0.258289 4:-29065066 MsG0480019892.01.T01:CDS
GAAGAAAGAACAAAAGAAAA+AGG 0.263561 4:-29064587 MsG0480019892.01.T01:CDS
TCGCAATTTCTTGGTCTTCC+AGG 0.267745 4:-29064791 MsG0480019892.01.T01:CDS
CGGAGAAGGGACCGATGATT+TGG 0.271085 4:+29065139 None:intergenic
TGTCAAAGCTCGCAATTTCT+TGG 0.285380 4:-29064800 MsG0480019892.01.T01:CDS
TAGTGAAGCTCAAACTAATT+TGG 0.293996 4:-29063982 MsG0480019892.01.T01:CDS
CTTAATCTGATGATTAAGTT+TGG 0.301894 4:+29062496 None:intergenic
TCTCTTAACTTGATCAGTTC+TGG 0.312964 4:+29062970 None:intergenic
TATCTATGTTACCAGATATA+CGG 0.314142 4:+29062066 None:intergenic
ACCCGATGTTATCAAGTTAA+AGG 0.322615 4:-29064293 MsG0480019892.01.T01:CDS
CTACTTCAGACACTTTAATA+TGG 0.324083 4:+29063121 None:intergenic
CGAATTGAAATCTATGAAAA+AGG 0.325156 4:-29064539 MsG0480019892.01.T01:CDS
TTTGATTTACCAGCGCCATT+AGG 0.326285 4:+29065096 None:intergenic
GGAACGGATTGAGAAGTTAA+TGG 0.327032 4:-29062465 MsG0480019892.01.T01:CDS
TCGAAAGATTACGCTCATTA+GGG 0.329739 4:-29063461 MsG0480019892.01.T01:CDS
GTAGAATAAAAGAGGAAGTT+AGG 0.335771 4:-29064064 MsG0480019892.01.T01:CDS
TTGATTTACCAGCGCCATTA+GGG 0.350784 4:+29065097 None:intergenic
AAAAGTAAAGTAAGTTCCTT+TGG 0.351545 4:+29064739 None:intergenic
GGTGCTTTCAACCGTATATC+TGG 0.355800 4:-29062077 MsG0480019892.01.T01:CDS
ATCGAAAGATTACGCTCATT+AGG 0.359793 4:-29063462 MsG0480019892.01.T01:CDS
AAGTTTGGATAAGTTTGTTT+TGG 0.366147 4:+29062511 None:intergenic
GGTATGCTGTTCCACCAAAA+AGG 0.367503 4:+29062011 None:intergenic
CAAAGCAGATAGCGTCCATT+AGG 0.373551 4:+29065073 None:intergenic
GTTGATAAAACAAGCTTTCA+AGG 0.379877 4:-29064451 MsG0480019892.01.T01:CDS
GGATTGTGAAAAGGAAATTC+AGG 0.380454 4:-29062558 MsG0480019892.01.T01:CDS
GAACGGATTGAGAAGTTAAT+GGG 0.383925 4:-29062464 MsG0480019892.01.T01:CDS
GGAGAGATATAATTTGTTCA+TGG 0.384149 4:-29062099 MsG0480019892.01.T01:CDS
AGATTATACTTCTTCTGTGT+TGG 0.399676 4:+29063633 None:intergenic
CGCAATTTCTTGGTCTTCCA+GGG 0.400472 4:-29064790 MsG0480019892.01.T01:CDS
GAAAGAGCTGTGTGTGTTGC+AGG 0.401857 4:-29063844 MsG0480019892.01.T01:CDS
CGCTGGTAAATCAAACCTAA+TGG 0.404671 4:-29065088 MsG0480019892.01.T01:CDS
GGGCAATTCTCTTTGCTGTT+GGG 0.408231 4:-29063386 MsG0480019892.01.T01:CDS
GCTTTAAAGAATGACTTAAA+GGG 0.409233 4:-29062683 MsG0480019892.01.T01:CDS
TCCTTTAACTTGATAACATC+GGG 0.411307 4:+29064292 None:intergenic
ACAAAGCTGACGTGTTAGTT+GGG 0.413592 4:-29061423 MsG0480019892.01.T01:CDS
ACAGCCATCATCGGCCCTAA+TGG 0.413636 4:-29065111 MsG0480019892.01.T01:CDS
TTCAAAATTAAAATATCAGT+TGG 0.414114 4:-29062765 MsG0480019892.01.T01:CDS
ACCGTAGAGGAATAAATGTC+TGG 0.417311 4:+29063505 None:intergenic
AGTTGGAGTATGAGCAAAAC+CGG 0.417895 4:-29062748 MsG0480019892.01.T01:CDS
TTCAACATTGAGCGATGAAA+AGG 0.419132 4:-29063025 MsG0480019892.01.T01:CDS
GGAATTCTGCTGACACAATC+TGG 0.421978 4:-29063282 MsG0480019892.01.T01:CDS
CTCCGCTGCTAACTTTGCTT+CGG 0.426051 4:+29062643 None:intergenic
GGAGAAGGGACCGATGATTT+GGG 0.427285 4:+29065140 None:intergenic
AGAAAAGTATGAATCAAAGT+TGG 0.429088 4:-29063172 MsG0480019892.01.T01:CDS
GAGTTCTCGAATTCAAGAAT+TGG 0.437343 4:-29062720 MsG0480019892.01.T01:CDS
AGGGCAATTCTCTTTGCTGT+TGG 0.438745 4:-29063387 MsG0480019892.01.T01:CDS
GCCGATGATGGCTGTGAAGC+CGG 0.439827 4:+29065119 None:intergenic
CTTTCAAGGTGTTGGTAAAG+AGG 0.443236 4:-29064437 MsG0480019892.01.T01:CDS
CAAGAGAGAGTACGAGAAGT+TGG 0.444711 4:-29064689 MsG0480019892.01.T01:CDS
AACAAAGCTGACGTGTTAGT+TGG 0.451148 4:-29061424 MsG0480019892.01.T01:CDS
GATTCAGTTTGATCCTTCCT+TGG 0.452042 4:-29063412 MsG0480019892.01.T01:CDS
ACGTTCTGCCTTGGTTCGCT+TGG 0.455871 4:-29064959 MsG0480019892.01.T01:CDS
ACTCTAAAACGCTTGTTTCA+AGG 0.456559 4:-29063687 MsG0480019892.01.T01:CDS
CAAAATCTTGTGAAGGAGAG+AGG 0.463366 4:-29061516 MsG0480019892.01.T01:CDS
GTCGAAATGTTGGGTCGAAA+AGG 0.464160 4:-29064117 MsG0480019892.01.T01:CDS
TCGACGGTAATGTGGTTACC+TGG 0.464557 4:-29064861 MsG0480019892.01.T01:CDS
TTGAATCCAGCTCTGACTCC+CGG 0.467160 4:+29063934 None:intergenic
AAAACAAGCTTTCAAGGTGT+TGG 0.472045 4:-29064445 MsG0480019892.01.T01:CDS
CGCTTGATCTCACTAAATAC+CGG 0.473757 4:-29061360 MsG0480019892.01.T01:CDS
CAGGAAAAGGGTCGAAATGT+TGG 0.475353 4:-29064127 MsG0480019892.01.T01:CDS
AGAATATAGTAGAATAAAAG+AGG 0.477378 4:-29064072 MsG0480019892.01.T01:CDS
CAAATCATCGGTCCCTTCTC+CGG 0.477655 4:-29065138 MsG0480019892.01.T01:CDS
TCTAGCCGTTACCGTTGCTA+TGG 0.480885 4:-29063613 MsG0480019892.01.T01:CDS
AAAGTGGAAATCCAAGTTAG+AGG 0.483116 4:-29062579 MsG0480019892.01.T01:CDS
AAAAGAGATGAATCAGTTGA+AGG 0.483918 4:-29062612 MsG0480019892.01.T01:CDS
CTGAAAACCCTTTCCATCAT+CGG 0.484387 4:+29061480 None:intergenic
CGCTTGTTTCAAGGAGTCCA+TGG 0.490083 4:-29063678 MsG0480019892.01.T01:CDS
CCCAGACATTTATTCCTCTA+CGG 0.490701 4:-29063506 MsG0480019892.01.T01:CDS
TAGATTCAATGCGGTTAAGC+AGG 0.492151 4:-29062120 MsG0480019892.01.T01:CDS
CAAGTTAGAGGATTGTGAAA+AGG 0.494401 4:-29062567 MsG0480019892.01.T01:CDS
ACACAATCTGGCACAATGAC+TGG 0.495148 4:-29063270 MsG0480019892.01.T01:CDS
CTGTTTCTCGCTGTCATCGA+AGG 0.496893 4:+29064990 None:intergenic
TGAACATGAAGCCAATGAAA+AGG 0.497806 4:-29064404 MsG0480019892.01.T01:CDS
AGCGCCATTAGGGCCGATGA+TGG 0.499199 4:+29065107 None:intergenic
TCGAAATGTTGGGTCGAAAA+GGG 0.499532 4:-29064116 MsG0480019892.01.T01:CDS
TCAACATTGAGCGATGAAAA+GGG 0.502116 4:-29063024 MsG0480019892.01.T01:CDS
GAAGAATGAACGTTCTGCCT+TGG 0.502748 4:-29064968 MsG0480019892.01.T01:CDS
ACAGCATCAAACCATGTCAC+TGG 0.506557 4:-29065211 None:intergenic
TTGAGAACCACGGAGGTGAA+TGG 0.508057 4:+29065035 None:intergenic
TGAATGAAATTTAGGACTCC+CGG 0.508193 4:+29061341 None:intergenic
TCCGGCTTCACAGCCATCAT+CGG 0.509679 4:-29065120 MsG0480019892.01.T01:CDS
GAGAGATATAATTTGTTCAT+GGG 0.510530 4:-29062098 MsG0480019892.01.T01:CDS
TGAAGGGTGAATATGAAAAG+TGG 0.516660 4:-29062595 MsG0480019892.01.T01:CDS
TGAAGCCAATGAAAAGGAAA+AGG 0.517556 4:-29064398 MsG0480019892.01.T01:CDS
CTCCTTTAACTTGATAACAT+CGG 0.518360 4:+29064291 None:intergenic
AGGAAAAGGGTCGAAATGTT+GGG 0.519504 4:-29064126 MsG0480019892.01.T01:CDS
TCTTGTTTGTGAAGATCTTG+AGG 0.522838 4:-29063358 MsG0480019892.01.T01:CDS
CAGCATCAAACCATGTCACT+GGG 0.524678 4:-29065210 None:intergenic
GTTTGATCCTTCCTTGGAGA+GGG 0.525060 4:-29063406 MsG0480019892.01.T01:CDS
TGATGAAGTTGATGCTGCAT+TGG 0.528838 4:-29061578 MsG0480019892.01.T01:CDS
ATACTGCGAAGGAATGCATC+AGG 0.533222 4:-29063554 MsG0480019892.01.T01:CDS
AAAGAGATGAATCAGTTGAA+GGG 0.537967 4:-29062611 MsG0480019892.01.T01:CDS
ATGAATGACGTACAGGAAAA+GGG 0.539907 4:-29064139 MsG0480019892.01.T01:intron
TCAAGACACCGATGATGGAA+AGG 0.542403 4:-29061488 MsG0480019892.01.T01:CDS
ATTGAAACAGTATGATTCCC+TGG 0.543584 4:-29062210 MsG0480019892.01.T01:CDS
GCTAATCAAGACACCGATGA+TGG 0.544568 4:-29061493 MsG0480019892.01.T01:CDS
GAATTCGAGAACTCATGTCC+CGG 0.545561 4:+29062729 None:intergenic
AAAAGGCAGAGGAACATCTT+CGG 0.545741 4:-29064570 MsG0480019892.01.T01:CDS
TATTAAAGTGTCTGAAGTAG+AGG 0.545750 4:-29063118 MsG0480019892.01.T01:CDS
CGAAAGATTACGCTCATTAG+GGG 0.545759 4:-29063460 MsG0480019892.01.T01:CDS
ATTCGTTCAAAATCTTGTGA+AGG 0.547590 4:-29061523 MsG0480019892.01.T01:CDS
GATGGCTGTGAAGCCGGAGA+AGG 0.547816 4:+29065125 None:intergenic
GGAGTCAGAGCTGGATTCAA+AGG 0.547900 4:-29063931 MsG0480019892.01.T01:CDS
TAATCATCAGATTAAGTCAA+AGG 0.548082 4:-29062489 MsG0480019892.01.T01:CDS
CCGTAGAGGAATAAATGTCT+GGG 0.548920 4:+29063506 None:intergenic
TGCTAAGTTTGCTGATACTG+TGG 0.548991 4:-29063712 MsG0480019892.01.T01:CDS
ACTTGCGCCTGTGGCAGTGA+TGG 0.551885 4:+29064894 None:intergenic
CAAGACACCGATGATGGAAA+GGG 0.552214 4:-29061487 MsG0480019892.01.T01:CDS
ATCATCGGCCCTAATGGCGC+TGG 0.552835 4:-29065105 MsG0480019892.01.T01:CDS
CTAGCCGTTACCGTTGCTAT+GGG 0.557768 4:-29063612 MsG0480019892.01.T01:CDS
TGCAAAGAATAAGGATGACC+TGG 0.557773 4:-29063877 MsG0480019892.01.T01:CDS
CAAAGCTGACGTGTTAGTTG+GGG 0.560498 4:-29061422 MsG0480019892.01.T01:CDS
GGGTCGAGATGGCAATGACT+TGG 0.564382 4:-29064096 MsG0480019892.01.T01:CDS
CTTTAAAGAATGACTTAAAG+GGG 0.564517 4:-29062682 MsG0480019892.01.T01:CDS
TTTAGCATTGTAGACATCCC+AGG 0.564950 4:+29064843 None:intergenic
AGCTGTCATGAAAGAAGAGA+AGG 0.567878 4:-29062153 MsG0480019892.01.T01:CDS
AATGGATGCAATTGTTGTTG+AGG 0.570500 4:-29063583 MsG0480019892.01.T01:CDS
GCAAGAACCATCACTGCCAC+AGG 0.572065 4:-29064901 MsG0480019892.01.T01:CDS
CAGAATTTCAAGTCATACAA+AGG 0.572120 4:-29065165 MsG0480019892.01.T01:CDS
TTTCGAGCAGATATCTGGCT+CGG 0.573865 4:-29064719 MsG0480019892.01.T01:CDS
ATGGCTGTGAAGCCGGAGAA+GGG 0.574175 4:+29065126 None:intergenic
TTAAAAGTTGTAACTGTGGA+CGG 0.578698 4:-29063303 MsG0480019892.01.T01:CDS
ATGTCTGGGGAGGAATCCGC+AGG 0.581973 4:+29063520 None:intergenic
GGCTTCTCAAAATGCAGCAG+AGG 0.582336 4:-29062813 MsG0480019892.01.T01:CDS
AGAATTGCCCTCTCCAAGGA+AGG 0.585346 4:+29063399 None:intergenic
TGGTGGCACTAGTGGTGGAA+TGG 0.586320 4:-29063250 MsG0480019892.01.T01:CDS
TACAAAGGTTCCCAAATCAT+CGG 0.587890 4:-29065150 MsG0480019892.01.T01:CDS
CGACGGTAATGTGGTTACCT+GGG 0.589141 4:-29064860 MsG0480019892.01.T01:CDS
GAATCAAAGTTGGAAGAGCT+AGG 0.590268 4:-29063162 MsG0480019892.01.T01:CDS
AAATTCAGGAACGGAAGAAG+AGG 0.595234 4:-29062544 MsG0480019892.01.T01:CDS
CATTAATTTACCCATAGCAA+CGG 0.600751 4:+29063602 None:intergenic
GTATGAAGAAAATCAACTCA+AGG 0.602074 4:-29062834 MsG0480019892.01.T01:CDS
TTTACCCATAGCAACGGTAA+CGG 0.602629 4:+29063608 None:intergenic
AAAATCTTGTGAAGGAGAGA+GGG 0.602787 4:-29061515 MsG0480019892.01.T01:CDS
CAACATTGAGCGATGAAAAG+GGG 0.606910 4:-29063023 MsG0480019892.01.T01:CDS
AGCTTTGACAAGAATGTCAA+GGG 0.609748 4:+29064813 None:intergenic
GTTTGCAGAGACTCTAAAAG+TGG 0.610738 4:-29061400 MsG0480019892.01.T01:CDS
GAGCTTTGACAAGAATGTCA+AGG 0.611042 4:+29064812 None:intergenic
AAAGAGAATTGCCCTCTCCA+AGG 0.611260 4:+29063395 None:intergenic
GAAGTACTGACTTGCGCCTG+TGG 0.611919 4:+29064885 None:intergenic
ACAATGACTGGTGGCACTAG+TGG 0.612466 4:-29063258 MsG0480019892.01.T01:CDS
AGTTTGATCCTTCCTTGGAG+AGG 0.612781 4:-29063407 MsG0480019892.01.T01:CDS
TGGGTCGAAAAGGGTCGAGA+TGG 0.614354 4:-29064107 MsG0480019892.01.T01:CDS
TTGATAAACCAAGCGAACCA+AGG 0.614939 4:+29064951 None:intergenic
TGAAATTCTGTATCTCGAGA+CGG 0.616444 4:+29065178 None:intergenic
GTACTTCATCGACGGTAATG+TGG 0.619581 4:-29064869 MsG0480019892.01.T01:CDS
GGCCGAAGCAAAGTTAGCAG+CGG 0.619751 4:-29062645 MsG0480019892.01.T01:CDS
TGAGGATGAAAATACTGCGA+AGG 0.620388 4:-29063565 MsG0480019892.01.T01:CDS
TGTTTGTGAAGATCTTGAGG+AGG 0.621023 4:-29063355 MsG0480019892.01.T01:CDS
AGATTAAGTCAAAGGAGGAA+CGG 0.623188 4:-29062481 MsG0480019892.01.T01:CDS
TATGCTGAGATTGAAAAGCA+AGG 0.625200 4:-29063063 MsG0480019892.01.T01:CDS
AAAGATCAATCATGCGACCA+TGG 0.625528 4:+29063661 None:intergenic
GTGAAAAGGAAATTCAGGAA+CGG 0.632020 4:-29062553 MsG0480019892.01.T01:CDS
AATTCAGGAACGGAAGAAGA+GGG 0.632676 4:-29062543 MsG0480019892.01.T01:CDS
CTAGTGGTGGAATGGAAGCA+AGG 0.633127 4:-29063242 MsG0480019892.01.T01:CDS
GCTTGATCTCACTAAATACC+GGG 0.634794 4:-29061359 MsG0480019892.01.T01:CDS
ATCAACTTCAAGTTCCTCAG+TGG 0.637706 4:+29064468 None:intergenic
CGATGTTATCAAGTTAAAGG+AGG 0.639471 4:-29064290 MsG0480019892.01.T01:CDS
ATGACTGGTGGCACTAGTGG+TGG 0.639638 4:-29063255 MsG0480019892.01.T01:CDS
AACGGATTGAGAAGTTAATG+GGG 0.645841 4:-29062463 MsG0480019892.01.T01:CDS
GAGGTTAAAAGTTGTAACTG+TGG 0.650773 4:-29063307 MsG0480019892.01.T01:CDS
TCATCAGATTAAGTCAAAGG+AGG 0.653398 4:-29062486 MsG0480019892.01.T01:CDS
GTTCCTTTAATTGAGAACCA+CGG 0.655844 4:+29065025 None:intergenic
CAATGGATTCAACATCACCC+TGG 0.659318 4:+29064773 None:intergenic
CAATCTGGCACAATGACTGG+TGG 0.659717 4:-29063267 MsG0480019892.01.T01:CDS
GTTGGAGTATGAGCAAAACC+GGG 0.667693 4:-29062747 MsG0480019892.01.T01:CDS
GTTAGAACCATTCACCTCCG+TGG 0.671957 4:-29065042 MsG0480019892.01.T01:CDS
GCAAGTCAGTACTTCATCGA+CGG 0.672701 4:-29064877 MsG0480019892.01.T01:CDS
AGAGGAATAAATGTCTGGGG+AGG 0.674962 4:+29063510 None:intergenic
TCAGGCATTTAAAAGACCTG+CGG 0.678777 4:-29063536 MsG0480019892.01.T01:CDS
GAAAGATTACGCTCATTAGG+GGG 0.684912 4:-29063459 MsG0480019892.01.T01:CDS
CGTAGAGGAATAAATGTCTG+GGG 0.688856 4:+29063507 None:intergenic
AAAGGGGCTACAGAACAAAG+AGG 0.694287 4:-29062666 MsG0480019892.01.T01:CDS
CCTTTAATTGAGAACCACGG+AGG 0.718018 4:+29065028 None:intergenic
AGCATCAAACCATGTCACTG+GGG 0.736134 4:-29065209 None:intergenic
TGCACACAAATAGACCGTAG+AGG 0.737569 4:+29063492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACACAAATATTTATAAAT+AGG + Chr4:29064807-29064826 None:intergenic 10.0%
!! GTTTAAGTATATTTATTACT+TGG + Chr4:29064869-29064888 None:intergenic 15.0%
!! TTCAAAATTAAAATATCAGT+TGG - Chr4:29063784-29063803 MsG0480019892.01.T01:CDS 15.0%
!!! GATATTTTAATTTTGAAAGT+TGG + Chr4:29063781-29063800 None:intergenic 15.0%
!! AGAAAAAAGAATTTCTTGAT+GGG - Chr4:29062530-29062549 MsG0480019892.01.T01:CDS 20.0%
!! AGAATATAGTAGAATAAAAG+AGG - Chr4:29062477-29062496 MsG0480019892.01.T01:CDS 20.0%
!! GGAAATAAGTAAAAACAATA+AGG + Chr4:29064786-29064805 None:intergenic 20.0%
! AAAAACAGATAGATTCAATG+CGG - Chr4:29064420-29064439 MsG0480019892.01.T01:CDS 25.0%
! AAAAGTAAAGTAAGTTCCTT+TGG + Chr4:29061813-29061832 None:intergenic 25.0%
! ACTTCATCAAGTATGAAAAA+TGG + Chr4:29064960-29064979 None:intergenic 25.0%
! ATAAAGAATGTCTACTAACA+TGG - Chr4:29064898-29064917 MsG0480019892.01.T01:CDS 25.0%
! CGAATTGAAATCTATGAAAA+AGG - Chr4:29062010-29062029 MsG0480019892.01.T01:intron 25.0%
! CTCTTCAACAATTAAAAAAC+CGG - Chr4:29062596-29062615 MsG0480019892.01.T01:CDS 25.0%
! CTTAATCTGATGATTAAGTT+TGG + Chr4:29064056-29064075 None:intergenic 25.0%
! GAAAATTGAAAAAACGAAGA+AGG - Chr4:29062301-29062320 MsG0480019892.01.T01:intron 25.0%
! GAAGAAAGAACAAAAGAAAA+AGG - Chr4:29061962-29061981 MsG0480019892.01.T01:intron 25.0%
! GAGAAAAAAGAATTTCTTGA+TGG - Chr4:29062529-29062548 MsG0480019892.01.T01:CDS 25.0%
! GATGTCTTGAAGAAAAAAAT+TGG - Chr4:29062757-29062776 MsG0480019892.01.T01:CDS 25.0%
! TAATCATCAGATTAAGTCAA+AGG - Chr4:29064060-29064079 MsG0480019892.01.T01:CDS 25.0%
! TATCTATGTTACCAGATATA+CGG + Chr4:29064486-29064505 None:intergenic 25.0%
! TCTTCAACAATTAAAAAACC+GGG - Chr4:29062597-29062616 MsG0480019892.01.T01:CDS 25.0%
! TGTTAGTAGACATTCTTTAT+AGG + Chr4:29064898-29064917 None:intergenic 25.0%
! TTATAACTGAAAAGATAAGG+AGG + Chr4:29064930-29064949 None:intergenic 25.0%
!! AGAAAAGTATGAATCAAAGT+TGG - Chr4:29063377-29063396 MsG0480019892.01.T01:CDS 25.0%
!! ATTCATACTTTTCTTTCTTC+TGG + Chr4:29063371-29063390 None:intergenic 25.0%
!! CTTTAAAGAATGACTTAAAG+GGG - Chr4:29063867-29063886 MsG0480019892.01.T01:CDS 25.0%
!! TCTTTCTATATGAGCATTTT+TGG - Chr4:29064721-29064740 MsG0480019892.01.T01:CDS 25.0%
!! TTCATACTTTTCTTTCTTCT+GGG + Chr4:29063370-29063389 None:intergenic 25.0%
!!! AAGTTTGGATAAGTTTGTTT+TGG + Chr4:29064041-29064060 None:intergenic 25.0%
!!! GAAGAAAAAGACTATTTTGA+TGG - Chr4:29061929-29061948 MsG0480019892.01.T01:intron 25.0%
!!! GAGAGATATAATTTGTTCAT+GGG - Chr4:29064451-29064470 MsG0480019892.01.T01:CDS 25.0%
!!! GCTTTAAAGAATGACTTAAA+GGG - Chr4:29063866-29063885 MsG0480019892.01.T01:CDS 25.0%
!!! TGATAGTTTTGCAAAGAATA+AGG - Chr4:29062663-29062682 MsG0480019892.01.T01:CDS 25.0%
!!! TGCTTTAAAGAATGACTTAA+AGG - Chr4:29063865-29063884 MsG0480019892.01.T01:CDS 25.0%
AAAAGAGATGAATCAGTTGA+AGG - Chr4:29063937-29063956 MsG0480019892.01.T01:CDS 30.0%
AAAGAGATGAATCAGTTGAA+GGG - Chr4:29063938-29063957 MsG0480019892.01.T01:CDS 30.0%
AGATTATACTTCTTCTGTGT+TGG + Chr4:29062919-29062938 None:intergenic 30.0%
ATTCGTTCAAAATCTTGTGA+AGG - Chr4:29065026-29065045 MsG0480019892.01.T01:CDS 30.0%
CATTAATTTACCCATAGCAA+CGG + Chr4:29062950-29062969 None:intergenic 30.0%
CTACTTCAGACACTTTAATA+TGG + Chr4:29063431-29063450 None:intergenic 30.0%
GGAAGATTCTTCAAATTTCT+TGG + Chr4:29063349-29063368 None:intergenic 30.0%
GGCTTATAACTGAAAAGATA+AGG + Chr4:29064933-29064952 None:intergenic 30.0%
GTAGAATAAAAGAGGAAGTT+AGG - Chr4:29062485-29062504 MsG0480019892.01.T01:CDS 30.0%
GTATGAAGAAAATCAACTCA+AGG - Chr4:29063715-29063734 MsG0480019892.01.T01:CDS 30.0%
TAGTGAAGCTCAAACTAATT+TGG - Chr4:29062567-29062586 MsG0480019892.01.T01:CDS 30.0%
TCAAGTATGAAAAATGGTGA+AGG + Chr4:29064954-29064973 None:intergenic 30.0%
TGAAAAAGGAACATTTCTTG+TGG - Chr4:29062024-29062043 MsG0480019892.01.T01:intron 30.0%
TGTTTCAATGCCTTCAAATT+TGG + Chr4:29064328-29064347 None:intergenic 30.0%
TTAAAAGTTGTAACTGTGGA+CGG - Chr4:29063246-29063265 MsG0480019892.01.T01:CDS 30.0%
! AATGCTAAAGAGAAGTTTTC+AGG - Chr4:29062373-29062392 MsG0480019892.01.T01:intron 30.0%
! CACATCAAAAACCAATTTTG+TGG + Chr4:29063118-29063137 None:intergenic 30.0%
! CAGAATTTCAAGTCATACAA+AGG - Chr4:29061384-29061403 MsG0480019892.01.T01:CDS 30.0%
! CGTCTTCATTTTCCAAATAT+AGG + Chr4:29064562-29064581 None:intergenic 30.0%
! CTTAATCTTTTCAACACATC+TGG + Chr4:29062183-29062202 None:intergenic 30.0%
! GTTGATAAAACAAGCTTTCA+AGG - Chr4:29062098-29062117 MsG0480019892.01.T01:CDS 30.0%
! TATTAAAGTGTCTGAAGTAG+AGG - Chr4:29063431-29063450 MsG0480019892.01.T01:CDS 30.0%
!! CTCCTTTAACTTGATAACAT+CGG + Chr4:29062261-29062280 None:intergenic 30.0%
!! GGAGAGATATAATTTGTTCA+TGG - Chr4:29064450-29064469 MsG0480019892.01.T01:CDS 30.0%
!! TCCTTTAACTTGATAACATC+GGG + Chr4:29062260-29062279 None:intergenic 30.0%
!!! AAGTCTTTCTTTTTCAACCA+GGG + Chr4:29064359-29064378 None:intergenic 30.0%
!!! CTATATGAGCATTTTTGGTT+TGG - Chr4:29064726-29064745 MsG0480019892.01.T01:CDS 30.0%
!!! TAAGTCTTTCTTTTTCAACC+AGG + Chr4:29064360-29064379 None:intergenic 30.0%
AAAAAGGTGAAGAACGAAAG+AGG - Chr4:29062333-29062352 MsG0480019892.01.T01:intron 35.0%
AAAACAAGCTTTCAAGGTGT+TGG - Chr4:29062104-29062123 MsG0480019892.01.T01:CDS 35.0%
AAAATCTTGTGAAGGAGAGA+GGG - Chr4:29065034-29065053 MsG0480019892.01.T01:CDS 35.0%
AAAGACTTCTGCAAATCAGT+TGG - Chr4:29063675-29063694 MsG0480019892.01.T01:CDS 35.0%
AAAGTGGAAATCCAAGTTAG+AGG - Chr4:29063970-29063989 MsG0480019892.01.T01:CDS 35.0%
AAGACTTCTGCAAATCAGTT+GGG - Chr4:29063676-29063695 MsG0480019892.01.T01:CDS 35.0%
AATGAATGACGTACAGGAAA+AGG - Chr4:29062409-29062428 MsG0480019892.01.T01:intron 35.0%
ACCCGATGTTATCAAGTTAA+AGG - Chr4:29062256-29062275 MsG0480019892.01.T01:intron 35.0%
AGAACAAAAGAAAAAGGCAG+AGG - Chr4:29061968-29061987 MsG0480019892.01.T01:intron 35.0%
AGAAGACAAAAATTCTGCTG+AGG - Chr4:29061884-29061903 MsG0480019892.01.T01:intron 35.0%
AGAAGTTAATGGGGAAAAAC+AGG - Chr4:29064095-29064114 MsG0480019892.01.T01:CDS 35.0%
AGATTAAGTCAAAGGAGGAA+CGG - Chr4:29064068-29064087 MsG0480019892.01.T01:CDS 35.0%
AGCTCATCAAAGTCAAAAAC+TGG + Chr4:29064201-29064220 None:intergenic 35.0%
ATCGAAAGATTACGCTCATT+AGG - Chr4:29063087-29063106 MsG0480019892.01.T01:CDS 35.0%
ATGAATGACGTACAGGAAAA+GGG - Chr4:29062410-29062429 MsG0480019892.01.T01:intron 35.0%
ATTGAAACAGTATGATTCCC+TGG - Chr4:29064339-29064358 MsG0480019892.01.T01:CDS 35.0%
CAAGTTAGAGGATTGTGAAA+AGG - Chr4:29063982-29064001 MsG0480019892.01.T01:CDS 35.0%
CATTGCATCGAAAAATCCAA+AGG - Chr4:29061794-29061813 MsG0480019892.01.T01:intron 35.0%
CGATGTTATCAAGTTAAAGG+AGG - Chr4:29062259-29062278 MsG0480019892.01.T01:intron 35.0%
CGTTGCTATGGGTAAATTAA+TGG - Chr4:29062948-29062967 MsG0480019892.01.T01:intron 35.0%
GAGGTTAAAAGTTGTAACTG+TGG - Chr4:29063242-29063261 MsG0480019892.01.T01:CDS 35.0%
GAGTTCTCGAATTCAAGAAT+TGG - Chr4:29063829-29063848 MsG0480019892.01.T01:CDS 35.0%
GGATTGTGAAAAGGAAATTC+AGG - Chr4:29063991-29064010 MsG0480019892.01.T01:CDS 35.0%
GGTAGAATACAAGCAAAACA+TGG - Chr4:29064269-29064288 MsG0480019892.01.T01:CDS 35.0%
GTACAAACACTACCTATGAA+TGG + Chr4:29064698-29064717 None:intergenic 35.0%
GTGAAAAGGAAATTCAGGAA+CGG - Chr4:29063996-29064015 MsG0480019892.01.T01:CDS 35.0%
GTTCCTTTAATTGAGAACCA+CGG + Chr4:29061527-29061546 None:intergenic 35.0%
TAACTGAAAAGATAAGGAGG+CGG + Chr4:29064927-29064946 None:intergenic 35.0%
TACAAAGGTTCCCAAATCAT+CGG - Chr4:29061399-29061418 MsG0480019892.01.T01:CDS 35.0%
TACTTGATGCCATGTTGAAA+TGG + Chr4:29064587-29064606 None:intergenic 35.0%
TAGGATCTGATATGATTGGA+AGG + Chr4:29064155-29064174 None:intergenic 35.0%
TATGCTGAGATTGAAAAGCA+AGG - Chr4:29063486-29063505 MsG0480019892.01.T01:CDS 35.0%
TCAACATTGAGCGATGAAAA+GGG - Chr4:29063525-29063544 MsG0480019892.01.T01:CDS 35.0%
TCAGTAGGACACTAAGAAAT+AGG - Chr4:29064220-29064239 MsG0480019892.01.T01:intron 35.0%
TCATCAGATTAAGTCAAAGG+AGG - Chr4:29064063-29064082 MsG0480019892.01.T01:CDS 35.0%
TCCAATCATATCAGATCCTA+TGG - Chr4:29064155-29064174 MsG0480019892.01.T01:intron 35.0%
TCCATAGGATCTGATATGAT+TGG + Chr4:29064159-29064178 None:intergenic 35.0%
TCGAAAGATTACGCTCATTA+GGG - Chr4:29063088-29063107 MsG0480019892.01.T01:CDS 35.0%
TGAAATTCTGTATCTCGAGA+CGG + Chr4:29061374-29061393 None:intergenic 35.0%
TGAACATGAAGCCAATGAAA+AGG - Chr4:29062145-29062164 MsG0480019892.01.T01:CDS 35.0%
TGAAGCCAATGAAAAGGAAA+AGG - Chr4:29062151-29062170 MsG0480019892.01.T01:CDS 35.0%
TGAAGGGTGAATATGAAAAG+TGG - Chr4:29063954-29063973 MsG0480019892.01.T01:CDS 35.0%
TGGAACAGCATACCTATATT+TGG - Chr4:29064547-29064566 MsG0480019892.01.T01:CDS 35.0%
TTCAACATTGAGCGATGAAA+AGG - Chr4:29063524-29063543 MsG0480019892.01.T01:CDS 35.0%
! AATACAAGAAAAGTGTGAGC+TGG - Chr4:29064119-29064138 MsG0480019892.01.T01:CDS 35.0%
! AATGGATGCAATTGTTGTTG+AGG - Chr4:29062966-29062985 MsG0480019892.01.T01:intron 35.0%
! AGCTTTGACAAGAATGTCAA+GGG + Chr4:29061739-29061758 None:intergenic 35.0%
! AGGAGGCAAAAATTTTAAGC+TGG - Chr4:29063211-29063230 MsG0480019892.01.T01:CDS 35.0%
! CTTTTCACAATCCTCTAACT+TGG + Chr4:29063984-29064003 None:intergenic 35.0%
! GCAAAAATTTTAAGCTGGAC+CGG - Chr4:29063216-29063235 MsG0480019892.01.T01:CDS 35.0%
! TACAACTTTTAACCTCTCAC+CGG + Chr4:29063238-29063257 None:intergenic 35.0%
! TAGCTCCTTTTCCTTTTCAT+TGG + Chr4:29062159-29062178 None:intergenic 35.0%
! TCTCTTAACTTGATCAGTTC+TGG + Chr4:29063582-29063601 None:intergenic 35.0%
! TCTTGTTTGTGAAGATCTTG+AGG - Chr4:29063191-29063210 MsG0480019892.01.T01:CDS 35.0%
! TGATTTTGCTAAAACCACTG+AGG - Chr4:29062067-29062086 MsG0480019892.01.T01:CDS 35.0%
!! AACGGATTGAGAAGTTAATG+GGG - Chr4:29064086-29064105 MsG0480019892.01.T01:CDS 35.0%
!! ACTCTAAAACGCTTGTTTCA+AGG - Chr4:29062862-29062881 MsG0480019892.01.T01:intron 35.0%
!! ATTTTGAAAGTTGGCTACTC+AGG + Chr4:29063772-29063791 None:intergenic 35.0%
!! CTTTGGATTTTTCGATGCAA+TGG + Chr4:29061796-29061815 None:intergenic 35.0%
!! GAACGGATTGAGAAGTTAAT+GGG - Chr4:29064085-29064104 MsG0480019892.01.T01:CDS 35.0%
!! TTACTTTTCGAGCAGATATC+TGG - Chr4:29061825-29061844 MsG0480019892.01.T01:intron 35.0%
AAAAGGCAGAGGAACATCTT+CGG - Chr4:29061979-29061998 MsG0480019892.01.T01:intron 40.0%
AAAGATCAATCATGCGACCA+TGG + Chr4:29062891-29062910 None:intergenic 40.0%
AAATTCAGGAACGGAAGAAG+AGG - Chr4:29064005-29064024 MsG0480019892.01.T01:CDS 40.0%
AACAAAGCTGACGTGTTAGT+TGG - Chr4:29065125-29065144 MsG0480019892.01.T01:CDS 40.0%
AACTGAAAAGATAAGGAGGC+GGG + Chr4:29064926-29064945 None:intergenic 40.0%
AAGAAGGAGCTCAGCAAAAA+AGG - Chr4:29062317-29062336 MsG0480019892.01.T01:intron 40.0%
AATTCAGGAACGGAAGAAGA+GGG - Chr4:29064006-29064025 MsG0480019892.01.T01:CDS 40.0%
ACAAAGCTGACGTGTTAGTT+GGG - Chr4:29065126-29065145 MsG0480019892.01.T01:CDS 40.0%
ACCGTAGAGGAATAAATGTC+TGG + Chr4:29063047-29063066 None:intergenic 40.0%
AGCTGTCATGAAAGAAGAGA+AGG - Chr4:29064396-29064415 MsG0480019892.01.T01:CDS 40.0%
AGGAAAAACAGATGCGAGAA+AGG - Chr4:29062638-29062657 MsG0480019892.01.T01:CDS 40.0%
AGGAAAAGGGTCGAAATGTT+GGG - Chr4:29062423-29062442 MsG0480019892.01.T01:intron 40.0%
AGTTGGAGTATGAGCAAAAC+CGG - Chr4:29063801-29063820 MsG0480019892.01.T01:CDS 40.0%
ATGTCGTAGAATGCCTTTGT+GGG + Chr4:29064623-29064642 None:intergenic 40.0%
CAAAATCTTGTGAAGGAGAG+AGG - Chr4:29065033-29065052 MsG0480019892.01.T01:CDS 40.0%
CAACATTGAGCGATGAAAAG+GGG - Chr4:29063526-29063545 MsG0480019892.01.T01:CDS 40.0%
CCCAGACATTTATTCCTCTA+CGG - Chr4:29063043-29063062 MsG0480019892.01.T01:CDS 40.0%
CCGTAGAGGAATAAATGTCT+GGG + Chr4:29063046-29063065 None:intergenic 40.0%
CGAAAGATTACGCTCATTAG+GGG - Chr4:29063089-29063108 MsG0480019892.01.T01:CDS 40.0%
CGCTGGTAAATCAAACCTAA+TGG - Chr4:29061461-29061480 MsG0480019892.01.T01:CDS 40.0%
CGCTTGATCTCACTAAATAC+CGG - Chr4:29065189-29065208 MsG0480019892.01.T01:CDS 40.0%
CGTAGAGGAATAAATGTCTG+GGG + Chr4:29063045-29063064 None:intergenic 40.0%
CTGAAAACCCTTTCCATCAT+CGG + Chr4:29065072-29065091 None:intergenic 40.0%
CTGTGACAGGGATAAAATAG+AGG - Chr4:29064248-29064267 MsG0480019892.01.T01:CDS 40.0%
GAAAGATTACGCTCATTAGG+GGG - Chr4:29063090-29063109 MsG0480019892.01.T01:CDS 40.0%
GAAGACGATCCATTTCAACA+TGG - Chr4:29064575-29064594 MsG0480019892.01.T01:CDS 40.0%
GAATCAAAGTTGGAAGAGCT+AGG - Chr4:29063387-29063406 MsG0480019892.01.T01:CDS 40.0%
GATTCAGTTTGATCCTTCCT+TGG - Chr4:29063137-29063156 MsG0480019892.01.T01:CDS 40.0%
GCTTGATCTCACTAAATACC+GGG - Chr4:29065190-29065209 MsG0480019892.01.T01:CDS 40.0%
GGAAACAGCACCAAATTTGA+AGG - Chr4:29064315-29064334 MsG0480019892.01.T01:CDS 40.0%
GGAAGCAAGGTCAAAAAAGT+GGG - Chr4:29063320-29063339 MsG0480019892.01.T01:CDS 40.0%
GTAGGACACTAAGAAATAGG+AGG - Chr4:29064223-29064242 MsG0480019892.01.T01:intron 40.0%
TAGATTCAATGCGGTTAAGC+AGG - Chr4:29064429-29064448 MsG0480019892.01.T01:CDS 40.0%
TCAGGCATTTAAAAGACCTG+CGG - Chr4:29063013-29063032 MsG0480019892.01.T01:CDS 40.0%
TCGAAATGTTGGGTCGAAAA+GGG - Chr4:29062433-29062452 MsG0480019892.01.T01:intron 40.0%
TGAGGATGAAAATACTGCGA+AGG - Chr4:29062984-29063003 MsG0480019892.01.T01:CDS 40.0%
TGCAAAGAATAAGGATGACC+TGG - Chr4:29062672-29062691 MsG0480019892.01.T01:CDS 40.0%
TGGAAGCAAGGTCAAAAAAG+TGG - Chr4:29063319-29063338 MsG0480019892.01.T01:CDS 40.0%
TGTCAAAGCTCGCAATTTCT+TGG - Chr4:29061749-29061768 MsG0480019892.01.T01:intron 40.0%
TGTTTGTGAAGATCTTGAGG+AGG - Chr4:29063194-29063213 MsG0480019892.01.T01:CDS 40.0%
TTGACTTTGATGAGCTCAGT+AGG - Chr4:29064205-29064224 MsG0480019892.01.T01:intron 40.0%
TTGATAAACCAAGCGAACCA+AGG + Chr4:29061601-29061620 None:intergenic 40.0%
TTGATTTACCAGCGCCATTA+GGG + Chr4:29061455-29061474 None:intergenic 40.0%
TTTACCCATAGCAACGGTAA+CGG + Chr4:29062944-29062963 None:intergenic 40.0%
TTTAGCATTGTAGACATCCC+AGG + Chr4:29061709-29061728 None:intergenic 40.0%
! ATCAACTTCAAGTTCCTCAG+TGG + Chr4:29062084-29062103 None:intergenic 40.0%
! CAAAGAGCAACACACCTTTT+TGG - Chr4:29064524-29064543 MsG0480019892.01.T01:CDS 40.0%
! CTACGACATGGATCAACTTT+TGG - Chr4:29064634-29064653 MsG0480019892.01.T01:CDS 40.0%
! GAGCTTTGACAAGAATGTCA+AGG + Chr4:29061740-29061759 None:intergenic 40.0%
! GCATTGATGTCTAAGATCGA+AGG - Chr4:29064294-29064313 MsG0480019892.01.T01:CDS 40.0%
! GTTTGCAGAGACTCTAAAAG+TGG - Chr4:29065149-29065168 MsG0480019892.01.T01:CDS 40.0%
! TTTGATTTACCAGCGCCATT+AGG + Chr4:29061456-29061475 None:intergenic 40.0%
!! ATTAGGGGGTACCACAAAAT+TGG - Chr4:29063104-29063123 MsG0480019892.01.T01:CDS 40.0%
!! CTTTCAAGGTGTTGGTAAAG+AGG - Chr4:29062112-29062131 MsG0480019892.01.T01:CDS 40.0%
!! GAGAAGTTTTCAGGATCTTC+AGG - Chr4:29062382-29062401 MsG0480019892.01.T01:intron 40.0%
!! GGAACGGATTGAGAAGTTAA+TGG - Chr4:29064084-29064103 MsG0480019892.01.T01:CDS 40.0%
!! TGATGAAGTTGATGCTGCAT+TGG - Chr4:29064971-29064990 MsG0480019892.01.T01:CDS 40.0%
!! TGCTAAGTTTGCTGATACTG+TGG - Chr4:29062837-29062856 MsG0480019892.01.T01:CDS 40.0%
AAAGAGAATTGCCCTCTCCA+AGG + Chr4:29063157-29063176 None:intergenic 45.0%
AAAGGGGCTACAGAACAAAG+AGG - Chr4:29063883-29063902 MsG0480019892.01.T01:CDS 45.0%
AACTGGACCTGTTGAGCTAT+CGG + Chr4:29064184-29064203 None:intergenic 45.0%
ACACAATCTGGCACAATGAC+TGG - Chr4:29063279-29063298 MsG0480019892.01.T01:CDS 45.0%
AGAGGAATAAATGTCTGGGG+AGG + Chr4:29063042-29063061 None:intergenic 45.0%
AGTTTGATCCTTCCTTGGAG+AGG - Chr4:29063142-29063161 MsG0480019892.01.T01:CDS 45.0%
ATACTGCGAAGGAATGCATC+AGG - Chr4:29062995-29063014 MsG0480019892.01.T01:CDS 45.0%
ATGGATACCGATAGCTCAAC+AGG - Chr4:29064174-29064193 MsG0480019892.01.T01:intron 45.0%
CAAAGCAGATAGCGTCCATT+AGG + Chr4:29061479-29061498 None:intergenic 45.0%
CAAAGCTGACGTGTTAGTTG+GGG - Chr4:29065127-29065146 MsG0480019892.01.T01:CDS 45.0%
CAGGAAAAGGGTCGAAATGT+TGG - Chr4:29062422-29062441 MsG0480019892.01.T01:intron 45.0%
CATGTCGTAGAATGCCTTTG+TGG + Chr4:29064624-29064643 None:intergenic 45.0%
CCTCCGTGGTTCTCAATTAA+AGG - Chr4:29061521-29061540 MsG0480019892.01.T01:CDS 45.0%
CCTTTAATTGAGAACCACGG+AGG + Chr4:29061524-29061543 None:intergenic 45.0%
CGTTGAGGTTCTCCATTCAT+AGG - Chr4:29064683-29064702 MsG0480019892.01.T01:CDS 45.0%
GAAGAATGAACGTTCTGCCT+TGG - Chr4:29061581-29061600 MsG0480019892.01.T01:CDS 45.0%
GAATTCGAGAACTCATGTCC+CGG + Chr4:29063823-29063842 None:intergenic 45.0%
GCAAGTCAGTACTTCATCGA+CGG - Chr4:29061672-29061691 MsG0480019892.01.T01:intron 45.0%
GCTAATCAAGACACCGATGA+TGG - Chr4:29065056-29065075 MsG0480019892.01.T01:CDS 45.0%
GGAATTCTGCTGACACAATC+TGG - Chr4:29063267-29063286 MsG0480019892.01.T01:CDS 45.0%
GGCGAAAATGAATGACGTAC+AGG - Chr4:29062403-29062422 MsG0480019892.01.T01:intron 45.0%
GGTATGCTGTTCCACCAAAA+AGG + Chr4:29064541-29064560 None:intergenic 45.0%
GGTGCTTTCAACCGTATATC+TGG - Chr4:29064472-29064491 MsG0480019892.01.T01:CDS 45.0%
GTACTTCATCGACGGTAATG+TGG - Chr4:29061680-29061699 MsG0480019892.01.T01:intron 45.0%
GTCGAAATGTTGGGTCGAAA+AGG - Chr4:29062432-29062451 MsG0480019892.01.T01:intron 45.0%
GTTGAGCTATCGGTATCCAT+AGG + Chr4:29064174-29064193 None:intergenic 45.0%
GTTGGAGTATGAGCAAAACC+GGG - Chr4:29063802-29063821 MsG0480019892.01.T01:CDS 45.0%
GTTTGATCCTTCCTTGGAGA+GGG - Chr4:29063143-29063162 MsG0480019892.01.T01:CDS 45.0%
TGCACACAAATAGACCGTAG+AGG + Chr4:29063060-29063079 None:intergenic 45.0%
TTTCGAGCAGATATCTGGCT+CGG - Chr4:29061830-29061849 MsG0480019892.01.T01:intron 45.0%
! AGAGCAACACACCTTTTTGG+TGG - Chr4:29064527-29064546 MsG0480019892.01.T01:CDS 45.0%
! AGGGCAATTCTCTTTGCTGT+TGG - Chr4:29063162-29063181 MsG0480019892.01.T01:CDS 45.0%
! CAAGAGAGAGTACGAGAAGT+TGG - Chr4:29061860-29061879 MsG0480019892.01.T01:intron 45.0%
! CAATGGATTCAACATCACCC+TGG + Chr4:29061779-29061798 None:intergenic 45.0%
! CGACATGGATCAACTTTTGG+TGG - Chr4:29064637-29064656 MsG0480019892.01.T01:CDS 45.0%
! CGCAATTTCTTGGTCTTCCA+GGG - Chr4:29061759-29061778 MsG0480019892.01.T01:intron 45.0%
! GACGCTATCTGCTTTGTTCT+TGG - Chr4:29061483-29061502 MsG0480019892.01.T01:CDS 45.0%
! TCGCAATTTCTTGGTCTTCC+AGG - Chr4:29061758-29061777 MsG0480019892.01.T01:intron 45.0%
!! AAATAGGAGGCACTGTGACA+GGG - Chr4:29064236-29064255 MsG0480019892.01.T01:CDS 45.0%
!! CAAGACACCGATGATGGAAA+GGG - Chr4:29065062-29065081 MsG0480019892.01.T01:CDS 45.0%
!! CACAAAGGCATTCTACGACA+TGG - Chr4:29064622-29064641 MsG0480019892.01.T01:CDS 45.0%
!! GGGCAATTCTCTTTGCTGTT+GGG - Chr4:29063163-29063182 MsG0480019892.01.T01:CDS 45.0%
!! TCAAGACACCGATGATGGAA+AGG - Chr4:29065061-29065080 MsG0480019892.01.T01:CDS 45.0%
AAAAAACCGGGAGTCAGAGC+TGG - Chr4:29062609-29062628 MsG0480019892.01.T01:CDS 50.0%
ACAATGACTGGTGGCACTAG+TGG - Chr4:29063291-29063310 MsG0480019892.01.T01:CDS 50.0%
AGAATTGCCCTCTCCAAGGA+AGG + Chr4:29063153-29063172 None:intergenic 50.0%
CAAATCATCGGTCCCTTCTC+CGG - Chr4:29061411-29061430 MsG0480019892.01.T01:CDS 50.0%
CAATCTGGCACAATGACTGG+TGG - Chr4:29063282-29063301 MsG0480019892.01.T01:CDS 50.0%
CGACGGTAATGTGGTTACCT+GGG - Chr4:29061689-29061708 MsG0480019892.01.T01:intron 50.0%
CGCTTGTTTCAAGGAGTCCA+TGG - Chr4:29062871-29062890 MsG0480019892.01.T01:intron 50.0%
CTAGCCGTTACCGTTGCTAT+GGG - Chr4:29062937-29062956 MsG0480019892.01.T01:intron 50.0%
CTCCGCTGCTAACTTTGCTT+CGG + Chr4:29063909-29063928 None:intergenic 50.0%
GAAAGAGCTGTGTGTGTTGC+AGG - Chr4:29062705-29062724 MsG0480019892.01.T01:CDS 50.0%
GGAGAAGGGACCGATGATTT+GGG + Chr4:29061412-29061431 None:intergenic 50.0%
GGAGTCAGAGCTGGATTCAA+AGG - Chr4:29062618-29062637 MsG0480019892.01.T01:CDS 50.0%
GGCTTCTCAAAATGCAGCAG+AGG - Chr4:29063736-29063755 MsG0480019892.01.T01:CDS 50.0%
GTTAGAACCATTCACCTCCG+TGG - Chr4:29061507-29061526 MsG0480019892.01.T01:CDS 50.0%
TCGACGGTAATGTGGTTACC+TGG - Chr4:29061688-29061707 MsG0480019892.01.T01:intron 50.0%
TCGTAGAATGCCTTTGTGGG+AGG + Chr4:29064620-29064639 None:intergenic 50.0%
TCTAGCCGTTACCGTTGCTA+TGG - Chr4:29062936-29062955 MsG0480019892.01.T01:intron 50.0%
TTGAGAACCACGGAGGTGAA+TGG + Chr4:29061517-29061536 None:intergenic 50.0%
! CTAGTGGTGGAATGGAAGCA+AGG - Chr4:29063307-29063326 MsG0480019892.01.T01:CDS 50.0%
! CTGTTTCTCGCTGTCATCGA+AGG + Chr4:29061562-29061581 None:intergenic 50.0%
! GCTCTTTCTTCGCGTTTTCC+AGG + Chr4:29062693-29062712 None:intergenic 50.0%
! TTGAATCCAGCTCTGACTCC+CGG + Chr4:29062618-29062637 None:intergenic 50.0%
! TTTTAAGCTGGACCGGTGAG+AGG - Chr4:29063223-29063242 MsG0480019892.01.T01:CDS 50.0%
!! GAAATAGGAGGCACTGTGAC+AGG - Chr4:29064235-29064254 MsG0480019892.01.T01:CDS 50.0%
ACAGCCATCATCGGCCCTAA+TGG - Chr4:29061438-29061457 MsG0480019892.01.T01:CDS 55.0%
ATGACTGGTGGCACTAGTGG+TGG - Chr4:29063294-29063313 MsG0480019892.01.T01:CDS 55.0%
ATGGCTGTGAAGCCGGAGAA+GGG + Chr4:29061426-29061445 None:intergenic 55.0%
CAATTGCTGCGCTTGCGTTG+AGG - Chr4:29064668-29064687 MsG0480019892.01.T01:CDS 55.0%
CACTGCTATGCCTCCCACAA+AGG - Chr4:29064607-29064626 MsG0480019892.01.T01:CDS 55.0%
CGGAGAAGGGACCGATGATT+TGG + Chr4:29061413-29061432 None:intergenic 55.0%
GCAAGAACCATCACTGCCAC+AGG - Chr4:29061648-29061667 MsG0480019892.01.T01:intron 55.0%
GGCCGAAGCAAAGTTAGCAG+CGG - Chr4:29063904-29063923 MsG0480019892.01.T01:CDS 55.0%
GGGTCGAGATGGCAATGACT+TGG - Chr4:29062453-29062472 MsG0480019892.01.T01:CDS 55.0%
TCCGGCTTCACAGCCATCAT+CGG - Chr4:29061429-29061448 MsG0480019892.01.T01:CDS 55.0%
TGGGTCGAAAAGGGTCGAGA+TGG - Chr4:29062442-29062461 MsG0480019892.01.T01:CDS 55.0%
! ACGTTCTGCCTTGGTTCGCT+TGG - Chr4:29061590-29061609 MsG0480019892.01.T01:CDS 55.0%
! TGGTGGCACTAGTGGTGGAA+TGG - Chr4:29063299-29063318 MsG0480019892.01.T01:CDS 55.0%
!! GAAGTACTGACTTGCGCCTG+TGG + Chr4:29061667-29061686 None:intergenic 55.0%
ACTTGCGCCTGTGGCAGTGA+TGG + Chr4:29061658-29061677 None:intergenic 60.0%
AGCGCCATTAGGGCCGATGA+TGG + Chr4:29061445-29061464 None:intergenic 60.0%
ATCATCGGCCCTAATGGCGC+TGG - Chr4:29061444-29061463 MsG0480019892.01.T01:CDS 60.0%
ATGTCTGGGGAGGAATCCGC+AGG + Chr4:29063032-29063051 None:intergenic 60.0%
GATGGCTGTGAAGCCGGAGA+AGG + Chr4:29061427-29061446 None:intergenic 60.0%
! GCCGATGATGGCTGTGAAGC+CGG + Chr4:29061433-29061452 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 29061351 29065220 29061351 ID=MsG0480019892.01;Name=MsG0480019892.01
Chr4 mRNA 29061351 29065220 29061351 ID=MsG0480019892.01.T01;Parent=MsG0480019892.01;Name=MsG0480019892.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|5|0|1026
Chr4 exon 29064233 29065220 29064233 ID=MsG0480019892.01.T01:exon:9622;Parent=MsG0480019892.01.T01
Chr4 exon 29062979 29064146 29062979 ID=MsG0480019892.01.T01:exon:9621;Parent=MsG0480019892.01.T01
Chr4 exon 29062439 29062877 29062439 ID=MsG0480019892.01.T01:exon:9620;Parent=MsG0480019892.01.T01
Chr4 exon 29062026 29062234 29062026 ID=MsG0480019892.01.T01:exon:9619;Parent=MsG0480019892.01.T01
Chr4 exon 29061351 29061627 29061351 ID=MsG0480019892.01.T01:exon:9618;Parent=MsG0480019892.01.T01
Chr4 CDS 29064233 29065220 29064233 ID=MsG0480019892.01.T01:cds;Parent=MsG0480019892.01.T01
Chr4 CDS 29062979 29064146 29062979 ID=MsG0480019892.01.T01:cds;Parent=MsG0480019892.01.T01
Chr4 CDS 29062439 29062877 29062439 ID=MsG0480019892.01.T01:cds;Parent=MsG0480019892.01.T01
Chr4 CDS 29062026 29062234 29062026 ID=MsG0480019892.01.T01:cds;Parent=MsG0480019892.01.T01
Chr4 CDS 29061351 29061627 29061351 ID=MsG0480019892.01.T01:cds;Parent=MsG0480019892.01.T01
Gene Sequence

>MsG0480019892.01.T01

ATGTCACTGGGGAAAATTCACCGTCTCGAGATACAGAATTTCAAGTCATACAAAGGTTCCCAAATCATCGGTCCCTTCTCCGGCTTCACAGCCATCATCGGCCCTAATGGCGCTGGTAAATCAAACCTAATGGACGCTATCTGCTTTGTTCTTGGCGTTAGAACCATTCACCTCCGTGGTTCTCAATTAAAGGAACTTATCTACACTGCCTTCGATGACAGCGAGAAACAGAAGAATGAACGTTCTGCCTTGGTTCGCTTGGTTTATCAACTCGCAGACAAATCTGAGATTCAATTTGCAAGAACCATCACTGCCACAGGCGCAAGTCAGTACTTCATCGACGGTAATGTGGTTACCTGGGATGTCTACAATGCTAAACTCATATCCCTTGACATTCTTGTCAAAGCTCGCAATTTCTTGGTCTTCCAGGGTGATGTTGAATCCATTGCATCGAAAAATCCAAAGGAACTTACTTTACTTTTCGAGCAGATATCTGGCTCGGATCAATTCAAGAGAGAGTACGAGAAGTTGGAAGAAGACAAAAATTCTGCTGAGGAGAAATTGAAACTTGTTTATCAGAAGAAAAAGACTATTTTGATGGAGAAAAAGAAGAAGAAAGAACAAAAGAAAAAGGCAGAGGAACATCTTCGGTTGCAAGACGAATTGAAATCTATGAAAAAGGAACATTTCTTGTGGAAGTTGTTCAATATAGAGAATGATTTTGCTAAAACCACTGAGGAACTTGAAGTTGATAAAACAAGCTTTCAAGGTGTTGGTAAAGAGGTAGAAAAATTTGAACATGAAGCCAATGAAAAGGAAAAGGAGCTAACCAGATGTGTTGAAAAGATTAAGCTACTCGAGAAGAAAATAACTGAGATAAGCAACAAACTTGATGACAAGACTCGACCCGATGTTATCAAGTTAAAGGAGGAAATATCTCGTATCAATTTGAAAATTGAAAAAACGAAGAAGGAGCTCAGCAAAAAAGGAAAAGGGTCGAAATGTTGGGTCGAAAAGGGTCGAGATGGCAATGACTTGGAAGAATATAGTAGAATAAAAGAGGAAGTTAGGATAAAAACTGCAAATCTTAGAGAGAAAAAAGAATTTCTTGATGGGCAGCAACGTGCTGATAGTGAAGCTCAAACTAATTTGGAAGAAACTCTTCAACAATTAAAAAACCGGGAGTCAGAGCTGGATTCAAAGGAAAAACAGATGCGAGAAAGGCTTGATAGTTTTGCAAAGAATAAGGATGACCTGGAAAACGCGAAGAAAGAGCTGTGTGTGTTGCAGGAAAAACAAAGAGATTTCAAGCGAGAATATGATGTCTTGAAGAAAAAAATTGGTGATGTAGTAAATGAACTACATGAATTGAAATCTGATAGATATGAAAACGAGAGAGATGCTAAGTTTGCTGATACTGTGGCGACTCTAAAACGCTTGTTTCAAGGAGTCCATGGTCGCATGATTGATCTTTGTAGACCAACACAGAAGAAGTATAATCTAGCCGTTACCGTTGCTATGGGTAAATTAATGGATGCAATTGTTGTTGAGGATGAAAATACTGCGAAGGAATGCATCAGGCATTTAAAAGACCTGCGGATTCCTCCCCAGACATTTATTCCTCTACGGTCTATTTGTGTGCAGCTAATAATCGAAAGATTACGCTCATTAGGGGGTACCACAAAATTGGTTTTTGATGTGATTCAGTTTGATCCTTCCTTGGAGAGGGCAATTCTCTTTGCTGTTGGGAACACTCTTGTTTGTGAAGATCTTGAGGAGGCAAAAATTTTAAGCTGGACCGGTGAGAGGTTAAAAGTTGTAACTGTGGACGGAATTCTGCTGACACAATCTGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAAAAGTGGGATGCCAAGAAATTTGAAGAATCTTCCCAGAAGAAAGAAAAGTATGAATCAAAGTTGGAAGAGCTAGGATCAATTAGAGATATGCACCATATTAAAGTGTCTGAAGTAGAGGAAAAAATTAGCGAACTCAAGAAGAAAGCTCAATATGCTGAGATTGAAAAGCAAGGCATTGAAAAGAAGCTTTCAACATTGAGCGATGAAAAGGGGACTATCAAAAAAGAAATTGAACGAGTTAGTCCAGAACTGATCAATTGGGTTGCAAACATTCGCGAGTATGAAGAAAATCAACTCAAGGCTTCTCAAAATGCAGCAGAGGAGAGACTGAACCTGAGTAGCCAACTTTCAAAATTAAAATATCAGTTGGAGTATGAGCAAAACCGGGACATGAGTTCTCGAATTCAAGAATTGGAATCTTCGCTGAGTGCTTTAAAGAATGACTTAAAGGGGCTACAGAACAAAGAGGCCGAAGCAAAGTTAGCAGCGGAGAATGCTACAAAAGAGATGAATCAGTTGAAGGGTGAATATGAAAAGTGGAAATCCAAGTTAGAGGATTGTGAAAAGGAAATTCAGGAACGGAAGAAGAGGGCTTCTGCAGCCAAAACAAACTTATCCAAACTTAATCATCAGATTAAGTCAAAGGAGGAACGGATTGAGAAGTTAATGGGGAAAAACAGGAAATACAAGAAAAGTGCATTGAAACAGTATGATTCCCTGGTTGAAAAAGAAAGACTTATAACTGAAGAGTTTGAAGCTGTCATGAAAGAAGAGAAGGAAAAAACAGATAGATTCAATGCGGTTAAGCAGGAGAGATATAATTTGTTCATGGGTGCTTTCAACCGTATATCTGGTAACATAGATAAAATCTACAAACAACTTACAAAGAGCAACACACCTTTTTGTTATAAGCCTTCACCATTTTTCATACTTGATGAAGTTGATGCTGCATTGGACAACTTGAATGTTGCGAAAGTTGCTAGCTTTATTCGTTCAAAATCTTGTGAAGGAGAGAGGGCTAATCAAGACACCGATGATGGAAAGGGTTTTCAGATAATTCAAATATCACAGAAAGATCACTTCTATAACAAAGCTGACGTGTTAGTTGGGGTTTGCAGAGACTCTAAAAGTGGCAGTTCGAGAACTCTCTCGCTTGATCTCACTAAATACCGGGAGTCCTAA
Protein sequence

>MsG0480019892.01.T01

MSLGKIHRLEIQNFKSYKGSQIIGPFSGFTAIIGPNGAGKSNLMDAICFVLGVRTIHLRGSQLKELIYTAFDDSEKQKNERSALVRLVYQLADKSEIQFARTITATGASQYFIDGNVVTWDVYNAKLISLDILVKARNFLVFQGDVESIASKNPKELTLLFEQISGSDQFKREYEKLEEDKNSAEEKLKLVYQKKKTILMEKKKKKEQKKKAEEHLRLQDELKSMKKEHFLWKLFNIENDFAKTTEELEVDKTSFQGVGKEVEKFEHEANEKEKELTRCVEKIKLLEKKITEISNKLDDKTRPDVIKLKEEISRINLKIEKTKKELSKKGKGSKCWVEKGRDGNDLEEYSRIKEEVRIKTANLREKKEFLDGQQRADSEAQTNLEETLQQLKNRESELDSKEKQMRERLDSFAKNKDDLENAKKELCVLQEKQRDFKREYDVLKKKIGDVVNELHELKSDRYENERDAKFADTVATLKRLFQGVHGRMIDLCRPTQKKYNLAVTVAMGKLMDAIVVEDENTAKECIRHLKDLRIPPQTFIPLRSICVQLIIERLRSLGGTTKLVFDVIQFDPSLERAILFAVGNTLVCEDLEEAKILSWTGERLKVVTVDGILLTQSGTMTGGTSGGMEARSKKWDAKKFEESSQKKEKYESKLEELGSIRDMHHIKVSEVEEKISELKKKAQYAEIEKQGIEKKLSTLSDEKGTIKKEIERVSPELINWVANIREYEENQLKASQNAAEERLNLSSQLSKLKYQLEYEQNRDMSSRIQELESSLSALKNDLKGLQNKEAEAKLAAENATKEMNQLKGEYEKWKSKLEDCEKEIQERKKRASAAKTNLSKLNHQIKSKEERIEKLMGKNRKYKKSALKQYDSLVEKERLITEEFEAVMKEEKEKTDRFNAVKQERYNLFMGAFNRISGNIDKIYKQLTKSNTPFCYKPSPFFILDEVDAALDNLNVAKVASFIRSKSCEGERANQDTDDGKGFQIIQISQKDHFYNKADVLVGVCRDSKSGSSRTLSLDLTKYRES*