AlfalfaGEDB | MsG0280008759.01

M. sativa cultivar ZhongmuNo.1 / MsG0280008759.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008759.01.T01	KEH43958.1	53.532	269	125	0	3	271	4	272	6.11E-105	316

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008759.01.T01	G8A101	53.532	269	125	0	3	271	4	272	2.92e-105	316

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047925.01	MsG0280008759.01	0.815461	9.136443e-52	6.303405e-49
MsG0080048431.01	MsG0280008759.01	0.801251	9.834840e-49	4.674720e-46
MsG0080048874.01	MsG0280008759.01	0.802625	5.133091e-49	2.526432e-46
MsG0180000748.01	MsG0280008759.01	0.829173	5.969405e-55	6.062484e-52
MsG0180002195.01	MsG0280008759.01	0.809982	1.445422e-50	8.609735e-48
MsG0180002233.01	MsG0280008759.01	0.813511	2.467287e-51	1.614453e-48
MsG0180002234.01	MsG0280008759.01	0.843400	1.434492e-58	2.241937e-55
MsG0180002667.01	MsG0280008759.01	0.897436	1.409207e-76	1.591894e-72
MsG0280006325.01	MsG0280008759.01	0.813322	2.713687e-51	1.766614e-48
MsG0280006551.01	MsG0280008759.01	0.879649	1.049152e-69	5.733511e-66
MsG0280008759.01	MsG0280009248.01	0.853674	2.044424e-61	4.452082e-58
MsG0280008759.01	MsG0280009306.01	0.811998	5.287319e-51	3.321986e-48
MsG0280008759.01	MsG0280009371.01	0.838113	3.487041e-57	4.624244e-54
MsG0280008759.01	MsG0380011759.01	0.833912	4.060264e-56	4.743506e-53
MsG0280008759.01	MsG0380013489.01	0.821124	4.769204e-53	3.846466e-50
MsG0280008759.01	MsG0380013596.01	0.825274	5.125066e-54	4.649727e-51
MsG0280008759.01	MsG0380013883.01	0.830424	2.960615e-55	3.117842e-52
MsG0280008759.01	MsG0380014422.01	0.800207	1.606021e-48	7.434285e-46
MsG0280008759.01	MsG0380014472.01	0.841002	6.185402e-58	8.965440e-55
MsG0280008759.01	MsG0380014867.01	0.810594	1.066663e-50	6.456490e-48
MsG0280008759.01	MsG0380014977.01	0.860652	1.779313e-63	4.899889e-60
MsG0280008759.01	MsG0380015821.01	0.822891	1.858864e-53	1.576010e-50
MsG0280008759.01	MsG0380017312.01	0.820583	6.351866e-53	5.045874e-50
MsG0280008759.01	MsG0380017820.01	0.855164	7.580613e-62	1.734137e-58
MsG0280008759.01	MsG0380017821.01	0.840938	6.432467e-58	9.305553e-55
MsG0280008759.01	MsG0380017822.01	0.865175	7.144720e-65	2.302973e-61
MsG0280008759.01	MsG0480018450.01	0.800235	1.584889e-48	7.341750e-46
MsG0280008759.01	MsG0480018664.01	0.821096	4.841690e-53	3.901903e-50
MsG0280008759.01	MsG0480019892.01	0.847245	1.306753e-59	2.308387e-56
MsG0280008759.01	MsG0480021587.01	0.829360	5.378516e-55	5.492709e-52
MsG0280008759.01	MsG0580026197.01	0.807757	4.324823e-50	2.428935e-47
MsG0280008759.01	MsG0580026222.01	0.883600	3.912040e-71	2.496984e-67
MsG0280008759.01	MsG0580026276.01	0.810903	9.143544e-51	5.580829e-48
MsG0280008759.01	MsG0580026303.01	0.835542	1.579503e-56	1.937402e-53
MsG0280008759.01	MsG0580026434.01	0.821813	3.306767e-53	2.719023e-50
MsG0280008759.01	MsG0580026631.01	0.813709	2.231442e-51	1.468024e-48
MsG0280008759.01	MsG0580027332.01	0.858810	6.378955e-63	1.648642e-59
MsG0280008759.01	MsG0580027687.01	0.802282	6.041494e-49	2.947773e-46
MsG0280008759.01	MsG0580027688.01	0.818738	1.675836e-52	1.264853e-49
MsG0280008759.01	MsG0580028223.01	0.814929	1.199101e-51	8.152880e-49
MsG0280008759.01	MsG0580029381.01	0.874988	4.390857e-68	2.017359e-64
MsG0280008759.01	MsG0580029899.01	0.820867	5.466311e-53	4.377357e-50
MsG0280008759.01	MsG0680031380.01	0.867349	1.460845e-65	5.084438e-62
MsG0280008759.01	MsG0680031896.01	0.809297	2.028375e-50	1.186484e-47
MsG0280008759.01	MsG0680031989.01	0.803156	3.987354e-49	1.989313e-46
MsG0280008759.01	MsG0680032844.01	0.820660	6.099335e-53	4.855509e-50
MsG0280008759.01	MsG0680033038.01	0.808959	2.396922e-50	1.389358e-47
MsG0280008759.01	MsG0680033423.01	0.833823	4.272854e-56	4.978301e-53
MsG0280008759.01	MsG0680035896.01	0.810961	8.884372e-51	5.431204e-48
MsG0280008759.01	MsG0780036498.01	0.814147	1.786637e-51	1.189383e-48
MsG0280008759.01	MsG0780037606.01	0.829176	5.960959e-55	6.054421e-52
MsG0280008759.01	MsG0780039282.01	0.881029	3.369570e-70	1.942858e-66
MsG0280008759.01	MsG0880041916.01	0.812255	4.647275e-51	2.940436e-48
MsG0280008759.01	MsG0880042454.01	0.822924	1.825507e-53	1.549231e-50
MsG0280008759.01	MsG0880044644.01	0.848346	6.498227e-60	1.188959e-56
MsG0280008759.01	MsG0880044788.01	0.840224	9.892725e-58	1.399869e-54
MsG0280008759.01	MsG0880045045.01	0.807009	6.231368e-50	3.432266e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280008759.01.T01	MTR_1g105765	53.532	269	125	0	3	271	4	272	7.40e-109	316
MsG0280008759.01.T01	MTR_1g105780	53.160	269	126	0	3	271	4	272	1.40e-108	315
MsG0280008759.01.T01	MTR_7g110090	48.339	271	140	0	1	271	1	271	2.45e-96	284
MsG0280008759.01.T01	MTR_4g062370	55.952	252	107	1	1	248	1	252	4.51e-95	295
MsG0280008759.01.T01	MTR_4g032560	49.416	257	130	0	15	271	44	300	8.66e-93	276
MsG0280008759.01.T01	MTR_4g032580	49.027	257	131	0	15	271	44	300	8.26e-92	274
MsG0280008759.01.T01	MTR_3g085990	48.327	269	101	5	1	268	1	232	4.02e-82	247
MsG0280008759.01.T01	MTR_1g084880	42.238	277	153	2	1	271	1	276	2.72e-74	228
MsG0280008759.01.T01	MTR_3g048970	41.877	277	154	2	1	271	1	276	8.88e-74	227
MsG0280008759.01.T01	MTR_1g047540	42.537	268	139	1	1	268	1	253	1.93e-72	230
MsG0280008759.01.T01	MTR_3g070250	40.727	275	154	2	2	271	11	281	2.52e-72	223
MsG0280008759.01.T01	MTR_1g069260	40.370	270	127	2	15	272	42	289	1.05e-67	212
MsG0280008759.01.T01	MTR_2g100360	40.234	256	146	2	1	250	1	255	2.32e-66	208
MsG0280008759.01.T01	MTR_3g452180	50.000	184	92	0	88	271	4	187	5.57e-65	201
MsG0280008759.01.T01	MTR_2g038740	40.664	241	138	1	1	236	1	241	5.79e-61	204
MsG0280008759.01.T01	MTR_1g087870	40.455	220	126	1	53	267	1	220	2.77e-56	181
MsG0280008759.01.T01	MTR_5g066660	33.088	272	153	3	1	271	1	244	8.72e-50	166
MsG0280008759.01.T01	MTR_5g094740	52.941	153	68	1	121	273	673	821	6.11e-49	173
MsG0280008759.01.T01	MTR_4g117740	46.386	166	60	1	50	215	61	197	6.10e-46	153
MsG0280008759.01.T01	MTR_4g121040	44.512	164	91	0	103	266	7	170	9.11e-45	150
MsG0280008759.01.T01	MTR_5g075200	50.769	130	64	0	52	181	65	194	8.09e-44	147
MsG0280008759.01.T01	MTR_0521s0010	33.488	215	124	3	8	217	2	202	1.67e-37	132
MsG0280008759.01.T01	MTR_1g019580	53.153	111	52	0	161	271	19	129	2.05e-37	129
MsG0280008759.01.T01	MTR_6g066070	46.667	120	64	0	1	120	1	120	1.10e-34	121
MsG0280008759.01.T01	MTR_1g052720	34.052	232	147	4	27	256	32	259	1.32e-33	124
MsG0280008759.01.T01	MTR_6g465600	31.301	246	149	3	22	256	28	264	4.65e-33	123
MsG0280008759.01.T01	MTR_8g043700	54.000	100	40	1	3	96	4	103	8.39e-32	114
MsG0280008759.01.T01	MTR_7g108360	55.208	96	42	1	1	96	1	95	1.26e-31	113
MsG0280008759.01.T01	MTR_2g435890	37.662	154	77	2	1	154	1	135	7.90e-31	113
MsG0280008759.01.T01	MTR_8g085330	50.467	107	50	1	22	128	51	154	3.93e-30	114
MsG0280008759.01.T01	MTR_8g042540	53.488	86	40	0	188	273	3	88	4.48e-27	100
MsG0280008759.01.T01	MTR_8g042540	53.571	84	39	0	190	273	17	100	2.01e-26	99.8
MsG0280008759.01.T01	MTR_3g449750	38.298	141	82	1	96	231	32	172	2.39e-23	94.4
MsG0280008759.01.T01	MTR_0246s0040	25.806	217	137	2	40	256	72	264	5.14e-23	96.3
MsG0280008759.01.T01	MTR_4g053887	33.758	157	67	2	13	169	3	122	5.17e-23	92.4
MsG0280008759.01.T01	MTR_2g016390	30.846	201	112	2	50	250	515	688	1.44e-22	97.4
MsG0280008759.01.T01	MTR_0007s0090	32.886	149	68	2	18	165	695	812	1.02e-20	92.0
MsG0280008759.01.T01	MTR_0152s0060	46.067	89	48	0	177	265	228	316	3.55e-20	89.4
MsG0280008759.01.T01	MTR_4g013250	57.143	63	27	0	26	88	28	90	1.61e-19	81.6
MsG0280008759.01.T01	MTR_0317s0030	40.217	92	55	0	1	92	1	92	1.64e-16	73.6
MsG0280008759.01.T01	MTR_4g057880	43.662	71	40	0	201	271	2	72	2.75e-16	72.4
MsG0280008759.01.T01	MTR_5g058370	41.000	100	50	3	1	93	126	223	7.85e-15	73.2
MsG0280008759.01.T01	MTR_0091s0090	25.568	176	116	3	80	253	2	164	1.05e-14	72.4
MsG0280008759.01.T01	MTR_1g045920	43.373	83	47	0	42	124	1	83	1.67e-14	72.0
MsG0280008759.01.T01	MTR_7g016070	56.604	53	23	0	58	110	2	54	2.12e-14	66.6
MsG0280008759.01.T01	MTR_4g121520	33.333	105	63	2	1	98	60	164	1.60e-13	70.5
MsG0280008759.01.T01	MTR_4g074500	42.623	61	35	0	16	76	13	73	1.85e-13	66.6
MsG0280008759.01.T01	MTR_4g081330	50.000	62	31	0	191	252	1085	1146	2.96e-13	70.1
MsG0280008759.01.T01	MTR_8g446670	40.909	66	39	0	1	66	1	66	6.47e-13	64.7
MsG0280008759.01.T01	MTR_6g016445	50.000	60	30	0	195	254	13	72	2.29e-12	62.4
MsG0280008759.01.T01	MTR_1g097230	47.368	57	28	1	1	55	1	57	5.25e-12	62.8
MsG0280008759.01.T01	MTR_1g037600	39.326	89	53	1	166	253	71	159	7.01e-12	64.7
MsG0280008759.01.T01	MTR_2g072800	36.893	103	48	1	173	258	166	268	2.68e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 68 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAATACTTCGAAGGAATTA+TGG	0.223973	2:-37890302	None:intergenic
GTTGCGGTTTAGGACGTTTA+TGG	0.225713	2:+37890096	MsG0280008759.01.T01:CDS
TTGATGAATGTGGTTGTATA+TGG	0.261102	2:+37890790	MsG0280008759.01.T01:CDS
TGAGATCGATTCTGAATTCT+TGG	0.264812	2:+37890620	MsG0280008759.01.T01:CDS
ACCAAAGTCGTAAGCAAAAT+TGG	0.280462	2:-37890241	None:intergenic
ATGCAGGATTTGGCTCATAT+TGG	0.290632	2:+37890720	MsG0280008759.01.T01:intron
ACATTAGTATTTGTTGGAAA+TGG	0.291674	2:+37890411	MsG0280008759.01.T01:CDS
ACAGGCTAAAGTTGCGGTTT+AGG	0.323474	2:+37890086	MsG0280008759.01.T01:CDS
TCAATATCCGTGTCAGAAAT+AGG	0.332599	2:+37890439	MsG0280008759.01.T01:CDS
TGGATAACATTAGTATTTGT+TGG	0.352039	2:+37890405	MsG0280008759.01.T01:CDS
CATTAGTATTTGTTGGAAAT+GGG	0.358285	2:+37890412	MsG0280008759.01.T01:CDS
TGCAGGATTTGGCTCATATT+GGG	0.361232	2:+37890721	MsG0280008759.01.T01:intron
GGTCAAGGCTAGAAGGTTAA+AGG	0.364042	2:+37890881	MsG0280008759.01.T01:CDS
TTCTCATTGACACCGATATA+TGG	0.377396	2:-37890930	None:intergenic
CCATAATTCCTTCGAAGTAT+TGG	0.392246	2:+37890302	MsG0280008759.01.T01:CDS
GACGGTGACAGTGTCGTTAT+CGG	0.398058	2:+37890903	MsG0280008759.01.T01:CDS
CTCCTTTCCATTTCACCCAC+AGG	0.398454	2:-37890058	None:intergenic
TGCACAAATGGCACAGGAAA+AGG	0.399613	2:-37890549	None:intergenic
CTCGCACACAATCTTCTTGC+TGG	0.401085	2:+37889917	MsG0280008759.01.T01:CDS
GTTATCGGTGCTCCATATAT+CGG	0.401878	2:+37890918	MsG0280008759.01.T01:CDS
CCTCATGCTCACTTTAAGAT+TGG	0.409855	2:+37890840	MsG0280008759.01.T01:CDS
AGATTGGCGGTGGCTGGAAC+AGG	0.416190	2:+37890856	MsG0280008759.01.T01:CDS
ACTTTAAGATTGGCGGTGGC+TGG	0.418939	2:+37890850	MsG0280008759.01.T01:CDS
ACATAATCCTGTGGGTGAAA+TGG	0.425158	2:+37890051	MsG0280008759.01.T01:CDS
TTAAATTCATTATGCACAAA+TGG	0.431684	2:-37890561	None:intergenic
CATGAGGGCGTGTAACAAAC+TGG	0.441451	2:-37890824	None:intergenic
ACAGGATGGTCAAGGCTAGA+AGG	0.443921	2:+37890874	MsG0280008759.01.T01:CDS
ACGCAATGCAAGCCAGCCTT+TGG	0.460560	2:-37890355	None:intergenic
ACTTTGGTGATAGTGTTGAT+AGG	0.462057	2:+37890256	MsG0280008759.01.T01:CDS
CATGCTCACTTTAAGATTGG+CGG	0.482279	2:+37890843	MsG0280008759.01.T01:CDS
ACCCACAGGATTATGTATCA+AGG	0.484056	2:-37890044	None:intergenic
TCAGAAATAGGTTGGGTAAG+AGG	0.500139	2:+37890451	MsG0280008759.01.T01:CDS
TTGCATAGGAGGTGTGAACC+TGG	0.509205	2:-37890484	None:intergenic
TGATGAATGTGGTTGTATAT+GGG	0.515279	2:+37890791	MsG0280008759.01.T01:CDS
TATCCGTGTCAGAAATAGGT+TGG	0.517230	2:+37890443	MsG0280008759.01.T01:CDS
AAATGGAAAGGAGAGCCAAC+AGG	0.528770	2:+37890068	MsG0280008759.01.T01:CDS
ATCCGTGTCAGAAATAGGTT+GGG	0.528825	2:+37890444	MsG0280008759.01.T01:CDS
ATAACGCATCACTTGGTGCA+TGG	0.549202	2:+37890385	MsG0280008759.01.T01:CDS
AAACCGCAACTTTAGCCTGT+TGG	0.558470	2:-37890083	None:intergenic
CTGAGTTTAGTTGATGAATG+TGG	0.560055	2:+37890780	MsG0280008759.01.T01:CDS
ATCCTGTGGGTGAAATGGAA+AGG	0.566847	2:+37890056	MsG0280008759.01.T01:CDS
GCTCACTTTAAGATTGGCGG+TGG	0.568885	2:+37890846	MsG0280008759.01.T01:CDS
AAGAAGATTGTGTGCGAGCA+TGG	0.571428	2:-37889912	None:intergenic
TCTCTCTACCAATACTTCGA+AGG	0.574251	2:-37890310	None:intergenic
CCAATCTTAAAGTGAGCATG+AGG	0.578221	2:-37890840	None:intergenic
ATTGGTAGAGAGAAACAACC+AGG	0.580535	2:+37890320	MsG0280008759.01.T01:CDS
CTCTCAACAGCGAATTGCAT+AGG	0.590485	2:-37890498	None:intergenic
TAGTATTTGTTGGAAATGGG+AGG	0.592775	2:+37890415	MsG0280008759.01.T01:CDS
ACCCTTGATACATAATCCTG+TGG	0.598049	2:+37890042	MsG0280008759.01.T01:CDS
CCCACAGGATTATGTATCAA+GGG	0.598540	2:-37890043	None:intergenic
TCATTATGCACAAATGGCAC+AGG	0.601819	2:-37890555	None:intergenic
CTATGCAATTCGCTGTTGAG+AGG	0.602851	2:+37890499	MsG0280008759.01.T01:CDS
TGCATAGGAGGTGTGAACCT+GGG	0.603224	2:-37890483	None:intergenic
GAGCCAACAGGCTAAAGTTG+CGG	0.603827	2:+37890080	MsG0280008759.01.T01:CDS
TACCCAACCTATTTCTGACA+CGG	0.609870	2:-37890446	None:intergenic
TCAACAGCGAATTGCATAGG+AGG	0.614378	2:-37890495	None:intergenic
TGTTGATAGGTATGCTACAT+TGG	0.616810	2:+37890269	MsG0280008759.01.T01:CDS
CCCTTGATACATAATCCTGT+GGG	0.621495	2:+37890043	MsG0280008759.01.T01:CDS
GTAAGAGGATACGATGTCCC+AGG	0.623787	2:+37890466	MsG0280008759.01.T01:CDS
AAGTCGTAAGCAAAATTGGT+TGG	0.627128	2:-37890237	None:intergenic
TGGCGGTGGCTGGAACAGGA+TGG	0.649155	2:+37890860	MsG0280008759.01.T01:CDS
TGATAGGTATGCTACATTGG+TGG	0.670079	2:+37890272	MsG0280008759.01.T01:CDS
TGGCTGGAACAGGATGGTCA+AGG	0.676417	2:+37890866	MsG0280008759.01.T01:CDS
AGGGCGTGTAACAAACTGGA+GGG	0.676724	2:-37890820	None:intergenic
CAATCTTAAAGTGAGCATGA+GGG	0.680650	2:-37890839	None:intergenic
AAGGCTAGAAGGTTAAAGGA+CGG	0.693112	2:+37890885	MsG0280008759.01.T01:CDS
GAGGGCGTGTAACAAACTGG+AGG	0.699235	2:-37890821	None:intergenic
TTGGTAGAGAGAAACAACCA+GGG	0.738238	2:+37890321	MsG0280008759.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAATCAAAAATACATGTAA+GGG	-	Chr2:37889982-37890001	None:intergenic	15.0%
!!	AAATCAAAAATACATGTAAG+GGG	-	Chr2:37889981-37890000	None:intergenic	20.0%
!!	CTAAATCAAAAATACATGTA+AGG	-	Chr2:37889983-37890002	None:intergenic	20.0%
!!	TTAAATTCATTATGCACAAA+TGG	-	Chr2:37890564-37890583	None:intergenic	20.0%
!	AATCAAAAATACATGTAAGG+GGG	-	Chr2:37889980-37889999	None:intergenic	25.0%
!	AATGACATACATATTAGATG+AGG	-	Chr2:37890007-37890026	None:intergenic	25.0%
!	TGGATAACATTAGTATTTGT+TGG	+	Chr2:37890405-37890424	MsG0280008759.01.T01:CDS	25.0%
!!	ACATTAGTATTTGTTGGAAA+TGG	+	Chr2:37890411-37890430	MsG0280008759.01.T01:CDS	25.0%
!!	CATTAGTATTTGTTGGAAAT+GGG	+	Chr2:37890412-37890431	MsG0280008759.01.T01:CDS	25.0%
!!	GTGTTAAAAAGATATTGACT+TGG	+	Chr2:37890653-37890672	MsG0280008759.01.T01:intron	25.0%
!!!	ACACATTTTTTTATGTTGCA+GGG	+	Chr2:37890201-37890220	MsG0280008759.01.T01:intron	25.0%
!!!	ATATGATGTTTTGATTATGC+AGG	+	Chr2:37890704-37890723	MsG0280008759.01.T01:intron	25.0%
	TGATGAATGTGGTTGTATAT+GGG	+	Chr2:37890791-37890810	MsG0280008759.01.T01:CDS	30.0%
	TTGATGAATGTGGTTGTATA+TGG	+	Chr2:37890790-37890809	MsG0280008759.01.T01:CDS	30.0%
!!!	CACACATTTTTTTATGTTGC+AGG	+	Chr2:37890200-37890219	MsG0280008759.01.T01:intron	30.0%
!!!	TGTTTTGATTATGCAGGATT+TGG	+	Chr2:37890710-37890729	MsG0280008759.01.T01:intron	30.0%
	AAGTCGTAAGCAAAATTGGT+TGG	-	Chr2:37890240-37890259	None:intergenic	35.0%
	ACCAAAGTCGTAAGCAAAAT+TGG	-	Chr2:37890244-37890263	None:intergenic	35.0%
	CAATCTTAAAGTGAGCATGA+GGG	-	Chr2:37890842-37890861	None:intergenic	35.0%
	CCAATACTTCGAAGGAATTA+TGG	-	Chr2:37890305-37890324	None:intergenic	35.0%
	CCATAATTCCTTCGAAGTAT+TGG	+	Chr2:37890302-37890321	MsG0280008759.01.T01:CDS	35.0%
	CTTTGGTGAAAAATATTCCC+TGG	-	Chr2:37890341-37890360	None:intergenic	35.0%
	TCAATATCCGTGTCAGAAAT+AGG	+	Chr2:37890439-37890458	MsG0280008759.01.T01:CDS	35.0%
	TTCTCATTGACACCGATATA+TGG	-	Chr2:37890933-37890952	None:intergenic	35.0%
!	ACCAATTTTGCTTACGACTT+TGG	+	Chr2:37890240-37890259	MsG0280008759.01.T01:CDS	35.0%
!	ACCTAAAACGTTGATTAAGC+AGG	-	Chr2:37890172-37890191	None:intergenic	35.0%
!	ACCTGCTTAATCAACGTTTT+AGG	+	Chr2:37890168-37890187	MsG0280008759.01.T01:intron	35.0%
!	ATGTCATTGTTGTTCAATCC+AGG	+	Chr2:37890019-37890038	MsG0280008759.01.T01:intron	35.0%
!	CAGGGAATATTTTTCACCAA+AGG	+	Chr2:37890339-37890358	MsG0280008759.01.T01:CDS	35.0%
!	GAATATTTTTCACCAAAGGC+TGG	+	Chr2:37890343-37890362	MsG0280008759.01.T01:CDS	35.0%
!	GACTTTTATAACGCATCACT+TGG	+	Chr2:37890378-37890397	MsG0280008759.01.T01:CDS	35.0%
!	TAGTATTTGTTGGAAATGGG+AGG	+	Chr2:37890415-37890434	MsG0280008759.01.T01:CDS	35.0%
!	TGAGATCGATTCTGAATTCT+TGG	+	Chr2:37890620-37890639	MsG0280008759.01.T01:CDS	35.0%
!	TGTTGATAGGTATGCTACAT+TGG	+	Chr2:37890269-37890288	MsG0280008759.01.T01:CDS	35.0%
!!	ACTTTGGTGATAGTGTTGAT+AGG	+	Chr2:37890256-37890275	MsG0280008759.01.T01:CDS	35.0%
!!	CTGAGTTTAGTTGATGAATG+TGG	+	Chr2:37890780-37890799	MsG0280008759.01.T01:CDS	35.0%
	AAGGCTAGAAGGTTAAAGGA+CGG	+	Chr2:37890885-37890904	MsG0280008759.01.T01:CDS	40.0%
	ACATAATCCTGTGGGTGAAA+TGG	+	Chr2:37890051-37890070	MsG0280008759.01.T01:CDS	40.0%
	ACCCACAGGATTATGTATCA+AGG	-	Chr2:37890047-37890066	None:intergenic	40.0%
	ACCCTTGATACATAATCCTG+TGG	+	Chr2:37890042-37890061	MsG0280008759.01.T01:CDS	40.0%
	ATCCGTGTCAGAAATAGGTT+GGG	+	Chr2:37890444-37890463	MsG0280008759.01.T01:CDS	40.0%
	ATTGGTAGAGAGAAACAACC+AGG	+	Chr2:37890320-37890339	MsG0280008759.01.T01:CDS	40.0%
	CCAATCTTAAAGTGAGCATG+AGG	-	Chr2:37890843-37890862	None:intergenic	40.0%
	CCCACAGGATTATGTATCAA+GGG	-	Chr2:37890046-37890065	None:intergenic	40.0%
	CCCTTGATACATAATCCTGT+GGG	+	Chr2:37890043-37890062	MsG0280008759.01.T01:CDS	40.0%
	TATCCGTGTCAGAAATAGGT+TGG	+	Chr2:37890443-37890462	MsG0280008759.01.T01:CDS	40.0%
	TCATTATGCACAAATGGCAC+AGG	-	Chr2:37890558-37890577	None:intergenic	40.0%
	TCTCTCTACCAATACTTCGA+AGG	-	Chr2:37890313-37890332	None:intergenic	40.0%
	TGATAGGTATGCTACATTGG+TGG	+	Chr2:37890272-37890291	MsG0280008759.01.T01:CDS	40.0%
	TTGGTAGAGAGAAACAACCA+GGG	+	Chr2:37890321-37890340	MsG0280008759.01.T01:CDS	40.0%
!	ATGCAGGATTTGGCTCATAT+TGG	+	Chr2:37890720-37890739	MsG0280008759.01.T01:intron	40.0%
!	GTTATCGGTGCTCCATATAT+CGG	+	Chr2:37890918-37890937	MsG0280008759.01.T01:CDS	40.0%
!	TCAGAAATAGGTTGGGTAAG+AGG	+	Chr2:37890451-37890470	MsG0280008759.01.T01:CDS	40.0%
!	TGCAGGATTTGGCTCATATT+GGG	+	Chr2:37890721-37890740	MsG0280008759.01.T01:intron	40.0%
!!	CATGCTCACTTTAAGATTGG+CGG	+	Chr2:37890843-37890862	MsG0280008759.01.T01:CDS	40.0%
!!	CCTCATGCTCACTTTAAGAT+TGG	+	Chr2:37890840-37890859	MsG0280008759.01.T01:CDS	40.0%
!!	TACCCAACCTATTTCTGACA+CGG	-	Chr2:37890449-37890468	None:intergenic	40.0%
	AAACCGCAACTTTAGCCTGT+TGG	-	Chr2:37890086-37890105	None:intergenic	45.0%
	AAATGGAAAGGAGAGCCAAC+AGG	+	Chr2:37890068-37890087	MsG0280008759.01.T01:CDS	45.0%
	AAGAAGATTGTGTGCGAGCA+TGG	-	Chr2:37889915-37889934	None:intergenic	45.0%
	ACAGGCTAAAGTTGCGGTTT+AGG	+	Chr2:37890086-37890105	MsG0280008759.01.T01:CDS	45.0%
	ATCCTGTGGGTGAAATGGAA+AGG	+	Chr2:37890056-37890075	MsG0280008759.01.T01:CDS	45.0%
	CTATGCAATTCGCTGTTGAG+AGG	+	Chr2:37890499-37890518	MsG0280008759.01.T01:CDS	45.0%
	CTCTCAACAGCGAATTGCAT+AGG	-	Chr2:37890501-37890520	None:intergenic	45.0%
	GGATTATGTATCAAGGGTCC+TGG	-	Chr2:37890040-37890059	None:intergenic	45.0%
	GGTCAAGGCTAGAAGGTTAA+AGG	+	Chr2:37890881-37890900	MsG0280008759.01.T01:CDS	45.0%
	TCAACAGCGAATTGCATAGG+AGG	-	Chr2:37890498-37890517	None:intergenic	45.0%
	TGCACAAATGGCACAGGAAA+AGG	-	Chr2:37890552-37890571	None:intergenic	45.0%
!	GTTGCGGTTTAGGACGTTTA+TGG	+	Chr2:37890096-37890115	MsG0280008759.01.T01:CDS	45.0%
!!	ATAACGCATCACTTGGTGCA+TGG	+	Chr2:37890385-37890404	MsG0280008759.01.T01:CDS	45.0%
	ACAGGATGGTCAAGGCTAGA+AGG	+	Chr2:37890874-37890893	MsG0280008759.01.T01:CDS	50.0%
	AGGGCGTGTAACAAACTGGA+GGG	-	Chr2:37890823-37890842	None:intergenic	50.0%
	CTCCTTTCCATTTCACCCAC+AGG	-	Chr2:37890061-37890080	None:intergenic	50.0%
	CTCGCACACAATCTTCTTGC+TGG	+	Chr2:37889917-37889936	MsG0280008759.01.T01:CDS	50.0%
	GAGCCAACAGGCTAAAGTTG+CGG	+	Chr2:37890080-37890099	MsG0280008759.01.T01:CDS	50.0%
	GTAAGAGGATACGATGTCCC+AGG	+	Chr2:37890466-37890485	MsG0280008759.01.T01:CDS	50.0%
!	CATGAGGGCGTGTAACAAAC+TGG	-	Chr2:37890827-37890846	None:intergenic	50.0%
!	GACGGTGACAGTGTCGTTAT+CGG	+	Chr2:37890903-37890922	MsG0280008759.01.T01:CDS	50.0%
!	TGCATAGGAGGTGTGAACCT+GGG	-	Chr2:37890486-37890505	None:intergenic	50.0%
!	TTGCATAGGAGGTGTGAACC+TGG	-	Chr2:37890487-37890506	None:intergenic	50.0%
!!	ACTTTAAGATTGGCGGTGGC+TGG	+	Chr2:37890850-37890869	MsG0280008759.01.T01:CDS	50.0%
!!	GCTCACTTTAAGATTGGCGG+TGG	+	Chr2:37890846-37890865	MsG0280008759.01.T01:CDS	50.0%
	ACGCAATGCAAGCCAGCCTT+TGG	-	Chr2:37890358-37890377	None:intergenic	55.0%
	TGGCTGGAACAGGATGGTCA+AGG	+	Chr2:37890866-37890885	MsG0280008759.01.T01:CDS	55.0%
!	GAGGGCGTGTAACAAACTGG+AGG	-	Chr2:37890824-37890843	None:intergenic	55.0%
	AGATTGGCGGTGGCTGGAAC+AGG	+	Chr2:37890856-37890875	MsG0280008759.01.T01:CDS	60.0%
	TGGCGGTGGCTGGAACAGGA+TGG	+	Chr2:37890860-37890879	MsG0280008759.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	37889890	37890980	37889890	ID=MsG0280008759.01;Name=MsG0280008759.01
Chr2	mRNA	37889890	37890980	37889890	ID=MsG0280008759.01.T01;Parent=MsG0280008759.01;Name=MsG0280008759.01.T01;_AED=0.48;_eAED=0.48;_QI=0\|0\|0\|0.75\|1\|1\|4\|0\|273
Chr2	exon	37889890	37889938	37889890	ID=MsG0280008759.01.T01:exon:20769;Parent=MsG0280008759.01.T01
Chr2	exon	37890041	37890138	37890041	ID=MsG0280008759.01.T01:exon:20770;Parent=MsG0280008759.01.T01
Chr2	exon	37890222	37890641	37890222	ID=MsG0280008759.01.T01:exon:20771;Parent=MsG0280008759.01.T01
Chr2	exon	37890726	37890980	37890726	ID=MsG0280008759.01.T01:exon:20772;Parent=MsG0280008759.01.T01
Chr2	CDS	37889890	37889938	37889890	ID=MsG0280008759.01.T01:cds;Parent=MsG0280008759.01.T01
Chr2	CDS	37890041	37890138	37890041	ID=MsG0280008759.01.T01:cds;Parent=MsG0280008759.01.T01
Chr2	CDS	37890222	37890641	37890222	ID=MsG0280008759.01.T01:cds;Parent=MsG0280008759.01.T01
Chr2	CDS	37890726	37890980	37890726	ID=MsG0280008759.01.T01:cds;Parent=MsG0280008759.01.T01

Gene Sequence

>MsG0280008759.01.T01

ATGGCACACAGCAGCACGACAACCATGCTCGCACACAATCTTCTTGCTGGACCCTTGATACATAATCCTGTGGGTGAAATGGAAAGGAGAGCCAACAGGCTAAAGTTGCGGTTTAGGACGTTTATGGTGACTTTAGATATTAACTACGGCGCTGTTATGTTGCCAACCAATTTTGCTTACGACTTTGGTGATAGTGTTGATAGGTATGCTACATTGGTGGATCACAACCATAATTCCTTCGAAGTATTGGTAGAGAGAAACAACCAGGGAATATTTTTCACCAAAGGCTGGCTTGCATTGCGTGACTTTTATAACGCATCACTTGGTGCATGGATAACATTAGTATTTGTTGGAAATGGGAGGTTCAATATCCGTGTCAGAAATAGGTTGGGTAAGAGGATACGATGTCCCAGGTTCACACCTCCTATGCAATTCGCTGTTGAGAGGAATGACAATCAAATGCATTTGTTCAATCCTTTTCCTGTGCCATTTGTGCATAATGAATTTAACTTTCAACTGACATATGAGAAAAAGCTTGACTTTGTTGAGATCGATTCTGAATTCTTGGATTTGGCTCATATTGGGTTCTGTCAGCTTGCTTTGAACACTGAAACTGAGAATCTGAGTTTAGTTGATGAATGTGGTTGTATATGGGATTGCACCCTCCAGTTTGTTACACGCCCTCATGCTCACTTTAAGATTGGCGGTGGCTGGAACAGGATGGTCAAGGCTAGAAGGTTAAAGGACGGTGACAGTGTCGTTATCGGTGCTCCATATATCGGTGTCAATGAGAAGCTCTTTTTTTTTGTTGTTTGTTATTAG

Protein sequence

>MsG0280008759.01.T01

MAHSSTTTMLAHNLLAGPLIHNPVGEMERRANRLKLRFRTFMVTLDINYGAVMLPTNFAYDFGDSVDRYATLVDHNHNSFEVLVERNNQGIFFTKGWLALRDFYNASLGAWITLVFVGNGRFNIRVRNRLGKRIRCPRFTPPMQFAVERNDNQMHLFNPFPVPFVHNEFNFQLTYEKKLDFVEIDSEFLDLAHIGFCQLALNTETENLSLVDECGCIWDCTLQFVTRPHAHFKIGGGWNRMVKARRLKDGDSVVIGAPYIGVNEKLFFFVVCY*