AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020400.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020400.01.T01 MTR_4g050120 94.590 610 9 1 1 610 1 586 0.0 1166
MsG0480020400.01.T02 MTR_4g050120 94.590 610 9 1 1 610 1 586 0.0 1166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020400.01.T01 AT5G21990 57.423 613 197 9 1 609 1 553 0.0 651
MsG0480020400.01.T02 AT5G21990 57.423 613 197 9 1 609 1 553 0.0 651

Find 31 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATTCTTGTTATGGCATTT+AGG 0.200778 4:-40601809 None:intergenic
GGTTGTATGGATTGAGAAAT+AGG 0.236077 4:-40600761 None:intergenic
GATTCTTGTTATGGCATTTA+GGG 0.271869 4:-40601808 None:intergenic
GTTAATGAAGATTCTTGTTA+TGG 0.296547 4:-40601817 None:intergenic
ATGCCACCGATTGGGTGTTA+TGG 0.331753 4:-40600783 None:intergenic
TCGTATGTCACCTGCTGATA+TGG 0.373633 4:+40602029 MsG0480020400.01.T01:CDS
TGAGCAATTCGGATCAAATC+AGG 0.376726 4:-40601994 None:intergenic
TCATAATTCAAAATGTTTAA+CGG 0.383982 4:+40601961 MsG0480020400.01.T01:exon
TGCCACCGATTGGGTGTTAT+GGG 0.389471 4:-40600782 None:intergenic
TCATCTGTTCTTGAGCAATT+CGG 0.416108 4:-40602005 None:intergenic
CAAAATGTTTAACGGTATGA+TGG 0.422343 4:+40601969 MsG0480020400.01.T01:exon
ATATATGAAACAAAATTTAG+AGG 0.424503 4:-40600717 None:intergenic
TATCTTTCTACTTTATAAGT+TGG 0.427986 4:-40601844 None:intergenic
ATTGGGTGTTATGGGTTGTA+TGG 0.446018 4:-40600774 None:intergenic
CACCCTAAATGCCACCGATT+GGG 0.455670 4:-40600791 None:intergenic
TATGGCATTTAGGGTGGGAC+AGG 0.463058 4:-40601799 None:intergenic
GTTGTATGGATTGAGAAATA+GGG 0.479180 4:-40600760 None:intergenic
GCTAAACCCCACCTCAACTT+TGG 0.487751 4:+40600686 MsG0480020400.01.T01:intron
AGGGAAAGATTCTCCTACCA+TGG 0.523573 4:-40601779 None:intergenic
TATGGCTCGGATCCAACAAC+AGG 0.533217 4:+40602047 MsG0480020400.01.T01:CDS
CTTGTTATGGCATTTAGGGT+GGG 0.535652 4:-40601804 None:intergenic
TTCTACTTTATAAGTTGGAA+AGG 0.539616 4:-40601839 None:intergenic
TCTTGTTATGGCATTTAGGG+TGG 0.544954 4:-40601805 None:intergenic
TACAACCCATAACACCCAAT+CGG 0.558790 4:+40600777 MsG0480020400.01.T01:five_prime_UTR
TGTCACCTGCTGATATGGCT+CGG 0.567453 4:+40602034 MsG0480020400.01.T01:CDS
TGGATCCGAGCCATATCAGC+AGG 0.568608 4:-40602039 None:intergenic
AAATTCAACTTTCCCATGGT+AGG 0.579139 4:+40601766 MsG0480020400.01.T01:intron
ATGGCATTTAGGGTGGGACA+GGG 0.582485 4:-40601798 None:intergenic
AACCCCACCTCAACTTTGGT+AGG 0.600074 4:+40600690 MsG0480020400.01.T01:intron
GGGAAAGATTCTCCTACCAT+GGG 0.623389 4:-40601778 None:intergenic
AGGTGCGCCTACCAAAGTTG+AGG 0.658196 4:-40600697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATAATCAGTATT+AGG - Chr4:40603635-40603654 None:intergenic 10.0%
!! AAAAATTATAATCAGTATTA+GGG - Chr4:40603634-40603653 None:intergenic 10.0%
!! ATAAATAATCAAAATACTAA+TGG - Chr4:40602576-40602595 None:intergenic 10.0%
!! TAAACTTAGAAATTAAAATA+AGG - Chr4:40606734-40606753 None:intergenic 10.0%
!! TAATTGTATTATGTAAAAAT+AGG + Chr4:40604175-40604194 MsG0480020400.01.T01:intron 10.0%
!!! AACAATTTTTTTAAATAGAT+GGG + Chr4:40599895-40599914 MsG0480020400.01.T01:intron 10.0%
!!! AATTTTAAATATTTTATCAC+TGG - Chr4:40606187-40606206 None:intergenic 10.0%
!!! AGTGATAAAATATTTAAAAT+TGG + Chr4:40606186-40606205 MsG0480020400.01.T01:intron 10.0%
!!! GATAACTTATTTTTTAAAAA+AGG + Chr4:40604921-40604940 MsG0480020400.01.T01:intron 10.0%
!!! GATTTAAAATTAAATTTTAC+AGG + Chr4:40603706-40603725 MsG0480020400.01.T01:intron 10.0%
!!! TAACTTATTTTTTAAAAAAG+GGG + Chr4:40604923-40604942 MsG0480020400.01.T01:intron 10.0%
!! AAACCAAAGTAAATAATTAA+AGG - Chr4:40606576-40606595 None:intergenic 15.0%
!! AACCAAAGTAAATAATTAAA+GGG - Chr4:40606575-40606594 None:intergenic 15.0%
!! ACATAAACAAGAATAAAAAA+AGG - Chr4:40603821-40603840 None:intergenic 15.0%
!! ATAAATTATGTATAGTACTT+CGG - Chr4:40606669-40606688 None:intergenic 15.0%
!! ATATACAAATATAATTGGAA+AGG - Chr4:40606304-40606323 None:intergenic 15.0%
!! ATATATGAAACAAAATTTAG+AGG - Chr4:40600720-40600739 None:intergenic 15.0%
!! ATTTATATAACTTTAGACTT+TGG - Chr4:40606926-40606945 None:intergenic 15.0%
!! TATAACATAGATATAGATAA+AGG - Chr4:40607949-40607968 None:intergenic 15.0%
!! TATCTTAATTGTAATGAAAA+TGG + Chr4:40600032-40600051 MsG0480020400.01.T01:intron 15.0%
!! TCATAATTCAAAATGTTTAA+CGG + Chr4:40601961-40601980 MsG0480020400.01.T01:exon 15.0%
!! TCTATATCTATGTTATATAA+AGG + Chr4:40607952-40607971 MsG0480020400.01.T01:three_prime_UTR 15.0%
!! TTAAGATATTAAATTGACAA+AGG - Chr4:40600328-40600347 None:intergenic 15.0%
!!! AACTTATTTTTTAAAAAAGG+GGG + Chr4:40604924-40604943 MsG0480020400.01.T01:intron 15.0%
!!! AACTTTTTAGTAAGAAAAAT+TGG + Chr4:40600187-40600206 MsG0480020400.01.T01:intron 15.0%
!!! AATTACATTTGTTATTGAAA+GGG + Chr4:40601026-40601045 MsG0480020400.01.T01:intron 15.0%
!!! AATTTCATTTTTGACATATA+TGG + Chr4:40606417-40606436 MsG0480020400.01.T01:intron 15.0%
!!! ACATTTTCATTGAAATATTT+TGG + Chr4:40601062-40601081 MsG0480020400.01.T01:intron 15.0%
!!! ATAAACATTATGGATTTTTT+TGG + Chr4:40600059-40600078 MsG0480020400.01.T01:intron 15.0%
!!! ATGTTTCATAATTGTTATTA+TGG + Chr4:40602115-40602134 MsG0480020400.01.T01:intron 15.0%
!!! ATTCAATAGTTTTATTGTTT+TGG + Chr4:40602183-40602202 MsG0480020400.01.T01:intron 15.0%
!!! ATTTAATTCAAGAGAAATTT+TGG - Chr4:40606272-40606291 None:intergenic 15.0%
!!! CAACAATTTTTTTAAATAGA+TGG + Chr4:40599894-40599913 MsG0480020400.01.T01:intron 15.0%
!!! TAAACATTATGGATTTTTTT+GGG + Chr4:40600060-40600079 MsG0480020400.01.T01:intron 15.0%
!!! TAATTACATTTGTTATTGAA+AGG + Chr4:40601025-40601044 MsG0480020400.01.T01:intron 15.0%
!!! TTAATTTAATTTTACATTCC+AGG + Chr4:40603888-40603907 MsG0480020400.01.T01:intron 15.0%
!! AAAAGAAAATAAAAAGACCA+TGG - Chr4:40603231-40603250 None:intergenic 20.0%
!! AACTACAAGCATTAAAATTA+GGG - Chr4:40607902-40607921 None:intergenic 20.0%
!! AATAGTTGTTTGTTCAAATT+CGG + Chr4:40602292-40602311 MsG0480020400.01.T01:intron 20.0%
!! AATTTAATATCTTAACAACC+TGG + Chr4:40600333-40600352 MsG0480020400.01.T01:intron 20.0%
!! AGTATTAGGATACATAATAA+AGG + Chr4:40607311-40607330 MsG0480020400.01.T01:intron 20.0%
!! ATAAGAACATATACTTCTAA+AGG - Chr4:40602873-40602892 None:intergenic 20.0%
!! ATATCTATGTTATATAAAGG+AGG + Chr4:40607955-40607974 MsG0480020400.01.T01:three_prime_UTR 20.0%
!! ATGTAATTAAAATAACGTGA+AGG - Chr4:40601014-40601033 None:intergenic 20.0%
!! ATGTTCTTATTGATATAATG+TGG + Chr4:40602883-40602902 MsG0480020400.01.T01:intron 20.0%
!! ATTCAAATGTAATTCCATTA+TGG - Chr4:40603517-40603536 None:intergenic 20.0%
!! ATTGACAATTCTCTAATTAT+GGG + Chr4:40604671-40604690 MsG0480020400.01.T01:intron 20.0%
!! CATTACAATTAAGATATGAA+TGG - Chr4:40600028-40600047 None:intergenic 20.0%
!! CTTCTTTATGAAAAAGATTT+GGG + Chr4:40600405-40600424 MsG0480020400.01.T01:intron 20.0%
!! GAAAAAAATATATATCTCCA+TGG + Chr4:40601304-40601323 MsG0480020400.01.T01:intron 20.0%
!! GTGTTCTTAAATAAATCTAA+TGG - Chr4:40600859-40600878 None:intergenic 20.0%
!! TAATTAAATATTTGACCCAA+GGG + Chr4:40606521-40606540 MsG0480020400.01.T01:intron 20.0%
!! TACCCTTTAATTATTTACTT+TGG + Chr4:40606570-40606589 MsG0480020400.01.T01:intron 20.0%
!! TATCTTTCTACTTTATAAGT+TGG - Chr4:40601847-40601866 None:intergenic 20.0%
!! TCAGTAGTAATATATATATC+AGG + Chr4:40603179-40603198 MsG0480020400.01.T01:intron 20.0%
!! TTAATTAAATATTTGACCCA+AGG + Chr4:40606520-40606539 MsG0480020400.01.T01:intron 20.0%
!! TTGAAGACTAAAATTAAACA+TGG - Chr4:40600970-40600989 None:intergenic 20.0%
!! TTGTTCACATCAATATTTAA+TGG + Chr4:40604456-40604475 MsG0480020400.01.T01:intron 20.0%
!!! AAGTTGGGTTTTAAAAATTA+AGG - Chr4:40603432-40603451 None:intergenic 20.0%
!!! AATATTTTATCACTGGTATA+CGG - Chr4:40606180-40606199 None:intergenic 20.0%
!!! AATTTAGAGCCATAAATTTA+AGG - Chr4:40605132-40605151 None:intergenic 20.0%
!!! ACATTAATATGTGTGTTTTT+TGG + Chr4:40602769-40602788 MsG0480020400.01.T01:intron 20.0%
!!! ACTTATTTTTTAAAAAAGGG+GGG + Chr4:40604925-40604944 MsG0480020400.01.T01:intron 20.0%
!!! ATAGCTGTTATTTTCTTTTT+AGG + Chr4:40604899-40604918 MsG0480020400.01.T01:intron 20.0%
!!! ATTTAGAGCCATAAATTTAA+GGG - Chr4:40605131-40605150 None:intergenic 20.0%
!!! TGTTGTTTTTTAATTGATTG+AGG + Chr4:40602219-40602238 MsG0480020400.01.T01:intron 20.0%
!!! TTATTTTCTGTTAAACTAGT+TGG + Chr4:40603653-40603672 MsG0480020400.01.T01:intron 20.0%
!!! TTTATACACTTTTCTTTTAC+TGG + Chr4:40607092-40607111 MsG0480020400.01.T01:intron 20.0%
! AAATGGTAGCATAAACATTA+TGG + Chr4:40600049-40600068 MsG0480020400.01.T01:intron 25.0%
! AAATTTCTTTATAGTCTCCT+TGG - Chr4:40604149-40604168 None:intergenic 25.0%
! AACAAGAAAATATACAGATC+TGG - Chr4:40600150-40600169 None:intergenic 25.0%
! AAGACTAAAATTAAACATGG+TGG - Chr4:40600967-40600986 None:intergenic 25.0%
! AATCAATGTAAACAATGGAT+TGG + Chr4:40604734-40604753 MsG0480020400.01.T01:intron 25.0%
! AATCTGAGTTCAATTGAAAA+AGG + Chr4:40600379-40600398 MsG0480020400.01.T01:intron 25.0%
! AATGTTTATCATGTAGAACT+GGG + Chr4:40607838-40607857 MsG0480020400.01.T01:three_prime_UTR 25.0%
! AATTAATTACAGAAGAGGAA+TGG - Chr4:40604872-40604891 None:intergenic 25.0%
! ACAATAGAACCAACAATAAA+AGG - Chr4:40600115-40600134 None:intergenic 25.0%
! ATTATGTATCCTAATACTAC+AGG - Chr4:40607309-40607328 None:intergenic 25.0%
! ATTGCTTTCCAAATAATCAA+TGG - Chr4:40607725-40607744 None:intergenic 25.0%
! CAACTACAAGCATTAAAATT+AGG - Chr4:40607903-40607922 None:intergenic 25.0%
! CAATCAATCAATGTAAACAA+TGG + Chr4:40604729-40604748 MsG0480020400.01.T01:intron 25.0%
! CATTATATGAGATTCCTTAA+TGG + Chr4:40607605-40607624 MsG0480020400.01.T01:three_prime_UTR 25.0%
! CTTCAAATTAGAATCAGTTT+CGG - Chr4:40602465-40602484 None:intergenic 25.0%
! CTTCATAATTTGGTTAAGTT+GGG - Chr4:40603447-40603466 None:intergenic 25.0%
! GAATCTTAGTATCTATGATT+AGG + Chr4:40602428-40602447 MsG0480020400.01.T01:intron 25.0%
! GAGATGAAAAAAATACATGT+GGG + Chr4:40600441-40600460 MsG0480020400.01.T01:intron 25.0%
! GATTGACAATTCTCTAATTA+TGG + Chr4:40604670-40604689 MsG0480020400.01.T01:intron 25.0%
! GCTTCTTTATGAAAAAGATT+TGG + Chr4:40600404-40600423 MsG0480020400.01.T01:intron 25.0%
! GTTAATGAAGATTCTTGTTA+TGG - Chr4:40601820-40601839 None:intergenic 25.0%
! TAATGGCTAAATTTACTGAA+TGG - Chr4:40607874-40607893 None:intergenic 25.0%
! TAATGTTTATCATGTAGAAC+TGG + Chr4:40607837-40607856 MsG0480020400.01.T01:three_prime_UTR 25.0%
! TATATATATTACTACTGACC+TGG - Chr4:40603177-40603196 None:intergenic 25.0%
! TATGAAGAATGCATAAAAGA+AGG + Chr4:40604009-40604028 MsG0480020400.01.T01:CDS 25.0%
! TCTCTAATTAATTACAGAAG+AGG - Chr4:40604877-40604896 None:intergenic 25.0%
! TGAGATGAAAAAAATACATG+TGG + Chr4:40600440-40600459 MsG0480020400.01.T01:intron 25.0%
! TTAAAATTAGGGTATGGTAA+TGG - Chr4:40607891-40607910 None:intergenic 25.0%
! TTAAGAACACAGATTTACTA+TGG + Chr4:40600869-40600888 MsG0480020400.01.T01:intron 25.0%
! TTATAACGCTATAATGTTGT+TGG + Chr4:40602384-40602403 MsG0480020400.01.T01:intron 25.0%
! TTCTTGTAAATCAATACTTG+AGG - Chr4:40605998-40606017 None:intergenic 25.0%
!! AACAAACTTTGTGTTTTCAT+TGG + Chr4:40606384-40606403 MsG0480020400.01.T01:intron 25.0%
!! AATCTGAAATTGAAGAAAGA+TGG + Chr4:40601372-40601391 MsG0480020400.01.T01:intron 25.0%
!! ACTCTTTTCCTCAATTATTT+CGG + Chr4:40603478-40603497 MsG0480020400.01.T01:intron 25.0%
!! AGTAAAAGTATAGCTAACAA+TGG + Chr4:40605312-40605331 MsG0480020400.01.T01:CDS 25.0%
!! ATATTTTATCACTGGTATAC+GGG - Chr4:40606179-40606198 None:intergenic 25.0%
!! ATCTGAAATTGAAGAAAGAT+GGG + Chr4:40601373-40601392 MsG0480020400.01.T01:intron 25.0%
!! ATGTTCTTCTTTTAATCTAG+TGG - Chr4:40599715-40599734 None:intergenic 25.0%
!! GAGATGTATTGATCTTATTA+TGG - Chr4:40601730-40601749 None:intergenic 25.0%
!! GAGCTGTTATTTAACAAAAT+TGG + Chr4:40602406-40602425 MsG0480020400.01.T01:intron 25.0%
!! GATTAGTTAGAGATATATCA+CGG + Chr4:40607351-40607370 MsG0480020400.01.T01:intron 25.0%
!! GTAAAAGTATAGCTAACAAT+GGG + Chr4:40605313-40605332 MsG0480020400.01.T01:CDS 25.0%
!! GTAACATACCATTGATTATT+TGG + Chr4:40607714-40607733 MsG0480020400.01.T01:three_prime_UTR 25.0%
!! GTAAGCTGTGATATTATTTT+GGG + Chr4:40604111-40604130 MsG0480020400.01.T01:intron 25.0%
!! TCAACAGTTTTTACAAATTG+AGG + Chr4:40607759-40607778 MsG0480020400.01.T01:three_prime_UTR 25.0%
!! TGTAAGCTGTGATATTATTT+TGG + Chr4:40604110-40604129 MsG0480020400.01.T01:intron 25.0%
!! TTAAACAAAACTGCAACTTT+TGG - Chr4:40606352-40606371 None:intergenic 25.0%
!! TTACTGGTTGATATTACTTA+CGG + Chr4:40607108-40607127 MsG0480020400.01.T01:intron 25.0%
!! TTCTACTTTATAAGTTGGAA+AGG - Chr4:40601842-40601861 None:intergenic 25.0%
!! TTTCTCTTTCTTTTCAACTT+TGG + Chr4:40599632-40599651 MsG0480020400.01.T01:five_prime_UTR 25.0%
!!! CAGTTTTTTTCTTTTCAGAA+GGG - Chr4:40601095-40601114 None:intergenic 25.0%
!!! GAATCCTCAAGATTTTAAAA+TGG + Chr4:40603000-40603019 MsG0480020400.01.T01:CDS 25.0%
!!! GACACTTTGAAATTACAAAA+GGG - Chr4:40603333-40603352 None:intergenic 25.0%
!!! TATGTCTATTTTGAGACTAA+AGG + Chr4:40603836-40603855 MsG0480020400.01.T01:intron 25.0%
!!! TCAGTTTTTTTCTTTTCAGA+AGG - Chr4:40601096-40601115 None:intergenic 25.0%
!!! TTATGGCTCTAAATTTTTAG+TGG + Chr4:40605137-40605156 MsG0480020400.01.T01:intron 25.0%
!!! TTCACCAATCATAGATTTTT+TGG + Chr4:40602155-40602174 MsG0480020400.01.T01:intron 25.0%
AAAAAACTTCTCTCTTACCA+TGG - Chr4:40601324-40601343 None:intergenic 30.0%
AAAAACTACAAACCTGTTGT+TGG - Chr4:40602062-40602081 None:intergenic 30.0%
AAACTGTTGAGACAACATTA+TGG - Chr4:40607749-40607768 None:intergenic 30.0%
AAATAACATGCAAATCACGA+AGG - Chr4:40602087-40602106 None:intergenic 30.0%
AAATGGCATCCTTACTAAAA+GGG + Chr4:40605812-40605831 MsG0480020400.01.T01:CDS 30.0%
AATGGTTAAAAATATGAGCC+CGG + Chr4:40606778-40606797 MsG0480020400.01.T01:CDS 30.0%
ACAAGTACAAGATAATTCTG+CGG + Chr4:40607064-40607083 MsG0480020400.01.T01:intron 30.0%
ACAGAAAGTAAATTCATAGC+AGG - Chr4:40604248-40604267 None:intergenic 30.0%
ACTAAAATTAAACATGGTGG+TGG - Chr4:40600964-40600983 None:intergenic 30.0%
ACTTATTATATGTTGAGAGC+TGG - Chr4:40599836-40599855 None:intergenic 30.0%
ACTTTACTTAACTGTTACCT+TGG + Chr4:40603793-40603812 MsG0480020400.01.T01:intron 30.0%
AGATGAATAATGAACAGTGA+AGG + Chr4:40601469-40601488 MsG0480020400.01.T01:intron 30.0%
AGCTAATATATTACAGAGAG+AGG - Chr4:40607806-40607825 None:intergenic 30.0%
AGGTCAAATATCAATTGAGT+GGG + Chr4:40603134-40603153 MsG0480020400.01.T01:CDS 30.0%
ATGAAAGTAAATCTCAGACA+TGG - Chr4:40606613-40606632 None:intergenic 30.0%
ATGCTTCCATCATGAAAAAT+CGG - Chr4:40603382-40603401 None:intergenic 30.0%
ATTATATTCCGAAAAATGCG+AGG + Chr4:40606322-40606341 MsG0480020400.01.T01:intron 30.0%
ATTATTTAAAGAAGCCAGAG+TGG - Chr4:40605536-40605555 None:intergenic 30.0%
CAAAATGTTTAACGGTATGA+TGG + Chr4:40601969-40601988 MsG0480020400.01.T01:exon 30.0%
CAAGCATTAAAATTAGGGTA+TGG - Chr4:40607897-40607916 None:intergenic 30.0%
CACACATATTAATGTGTGTT+AGG - Chr4:40602764-40602783 None:intergenic 30.0%
CATTAATGCTCTTCTAACTA+TGG + Chr4:40604299-40604318 MsG0480020400.01.T01:intron 30.0%
CCATAGAATGATAGAATGAA+TGG + Chr4:40603547-40603566 MsG0480020400.01.T01:intron 30.0%
CCATTCATTCTATCATTCTA+TGG - Chr4:40603550-40603569 None:intergenic 30.0%
CTAATATATTACAGAGAGAG+GGG - Chr4:40607804-40607823 None:intergenic 30.0%
CTACATGCACGATTTAAAAA+AGG - Chr4:40605176-40605195 None:intergenic 30.0%
CTATAAAATTCCAGATCCAT+AGG + Chr4:40601657-40601676 MsG0480020400.01.T01:intron 30.0%
CTTACCATCTTGTTAATCTT+AGG - Chr4:40606973-40606992 None:intergenic 30.0%
CTTATCTTATTGTGTACACA+TGG + Chr4:40602620-40602639 MsG0480020400.01.T01:intron 30.0%
CTTATTATATGTTGAGAGCT+GGG - Chr4:40599835-40599854 None:intergenic 30.0%
GAGAAGTGAAAGATGAAATT+TGG - Chr4:40606127-40606146 None:intergenic 30.0%
GAGTATAGAAACCATGTTTA+CGG + Chr4:40601135-40601154 MsG0480020400.01.T01:intron 30.0%
GATGAATAATGAACAGTGAA+GGG + Chr4:40601470-40601489 MsG0480020400.01.T01:intron 30.0%
GCTAATATATTACAGAGAGA+GGG - Chr4:40607805-40607824 None:intergenic 30.0%
GCTTAAGAAGATGTTTGAAA+TGG + Chr4:40605795-40605814 MsG0480020400.01.T01:CDS 30.0%
GCTTCATAATTTGGTTAAGT+TGG - Chr4:40603448-40603467 None:intergenic 30.0%
GGTTTAATATAACTTTCCCA+TGG - Chr4:40600838-40600857 None:intergenic 30.0%
GTAAAAATTCAACTTTCCCA+TGG + Chr4:40601762-40601781 MsG0480020400.01.T01:intron 30.0%
GTAAATCAATACTTGAGGAT+GGG - Chr4:40605993-40606012 None:intergenic 30.0%
GTCACCAAAAAATCTATGAT+TGG - Chr4:40602162-40602181 None:intergenic 30.0%
GTTGATCAACCAAAAAAGTT+TGG + Chr4:40605276-40605295 MsG0480020400.01.T01:CDS 30.0%
TAAATGTCAGCCATTAGATT+AGG - Chr4:40600631-40600650 None:intergenic 30.0%
TAAGCTGAGTCTTAGTATTT+AGG + Chr4:40602833-40602852 MsG0480020400.01.T01:intron 30.0%
TAATATCACAGCTTACATGT+TGG - Chr4:40604107-40604126 None:intergenic 30.0%
TATATAAAGGAGGAGCAAAA+TGG + Chr4:40607965-40607984 MsG0480020400.01.T01:three_prime_UTR 30.0%
TATTGAGTGTCCTCTAATAA+AGG + Chr4:40604811-40604830 MsG0480020400.01.T01:intron 30.0%
TCAATATTTAATGGCATTCC+TGG + Chr4:40604465-40604484 MsG0480020400.01.T01:intron 30.0%
TGTAAATCAATACTTGAGGA+TGG - Chr4:40605994-40606013 None:intergenic 30.0%
TTAACAAGATGGTAAGATGA+AGG + Chr4:40606977-40606996 MsG0480020400.01.T01:intron 30.0%
TTAATATAACTTTCCCATGG+TGG - Chr4:40600835-40600854 None:intergenic 30.0%
TTATAAATAAGCACTCAGTG+TGG + Chr4:40602648-40602667 MsG0480020400.01.T01:intron 30.0%
TTTCACATTTCTTCATCCTA+TGG - Chr4:40601676-40601695 None:intergenic 30.0%
TTTGGTTACATTTCCTAGTA+TGG - Chr4:40607008-40607027 None:intergenic 30.0%
! ACTCTGGCTTCTTTAAATAA+TGG + Chr4:40605535-40605554 MsG0480020400.01.T01:CDS 30.0%
! ACTGATTCTAATTTGAAGCT+TGG + Chr4:40602467-40602486 MsG0480020400.01.T01:intron 30.0%
! AGATTCTTGTTATGGCATTT+AGG - Chr4:40601812-40601831 None:intergenic 30.0%
! AGATTCTTTCCCTTTTAGTA+AGG - Chr4:40605824-40605843 None:intergenic 30.0%
! AGCTTTCTACTTTGAAAAGA+TGG - Chr4:40603937-40603956 None:intergenic 30.0%
! ATACAATTGCAGACCTTTTA+CGG + Chr4:40604546-40604565 MsG0480020400.01.T01:CDS 30.0%
! CATTAGAGTTTGAAGTAAAC+TGG + Chr4:40604955-40604974 MsG0480020400.01.T01:intron 30.0%
! GAGTCTTAGTATTTAGGATT+GGG + Chr4:40602839-40602858 MsG0480020400.01.T01:intron 30.0%
! GATTCTTGTTATGGCATTTA+GGG - Chr4:40601811-40601830 None:intergenic 30.0%
! GTTAACCAACTTTTCTTAAG+AGG + Chr4:40606482-40606501 MsG0480020400.01.T01:intron 30.0%
! GTTGTATGGATTGAGAAATA+GGG - Chr4:40600763-40600782 None:intergenic 30.0%
! TAATTTTACATTCCAGGCTA+AGG + Chr4:40603894-40603913 MsG0480020400.01.T01:intron 30.0%
! TACTGGTTGATATTACTTAC+GGG + Chr4:40607109-40607128 MsG0480020400.01.T01:intron 30.0%
! TCAAAGTAGAAAGCTTCTTT+TGG + Chr4:40603942-40603961 MsG0480020400.01.T01:CDS 30.0%
! TCACAACTTCCTTTTATTGT+TGG + Chr4:40600103-40600122 MsG0480020400.01.T01:intron 30.0%
! TCTAATTTGAAGCTTGGAAT+TGG + Chr4:40602473-40602492 MsG0480020400.01.T01:intron 30.0%
! TGAGTCTTAGTATTTAGGAT+TGG + Chr4:40602838-40602857 MsG0480020400.01.T01:intron 30.0%
! TGATTCTGTAAAACTGATTC+TGG - Chr4:40602709-40602728 None:intergenic 30.0%
! TTCCATTTTGTCATTGCAAT+GGG + Chr4:40604053-40604072 MsG0480020400.01.T01:CDS 30.0%
!! AAACTCTCTGAAGTTGATTT+CGG - Chr4:40605342-40605361 None:intergenic 30.0%
!! AAGAATAAAAAAAGGTGCCA+AGG - Chr4:40603813-40603832 None:intergenic 30.0%
!! CGACACTTTGAAATTACAAA+AGG - Chr4:40603334-40603353 None:intergenic 30.0%
!! CGACATTTGAAATGAAGTTT+TGG - Chr4:40605507-40605526 None:intergenic 30.0%
!! CTCTAATAAAGGAGTTGATA+CGG + Chr4:40604822-40604841 MsG0480020400.01.T01:intron 30.0%
!! TACTAAGGAACAGTTGATAA+AGG + Chr4:40605029-40605048 MsG0480020400.01.T01:CDS 30.0%
!! TATTGTTGGTTCTATTGTTG+TGG + Chr4:40600117-40600136 MsG0480020400.01.T01:intron 30.0%
!!! AACAACCTGGTTTGTTTTTT+TGG + Chr4:40600346-40600365 MsG0480020400.01.T01:intron 30.0%
!!! ACAACCTGGTTTGTTTTTTT+GGG + Chr4:40600347-40600366 MsG0480020400.01.T01:intron 30.0%
!!! AGTTTTAGTTAGAGTTGTTG+TGG - Chr4:40601166-40601185 None:intergenic 30.0%
!!! CTTGCAGTTTTAAACATATC+AGG - Chr4:40605745-40605764 None:intergenic 30.0%
AAAATCCAACTTTCCCATTG+TGG - Chr4:40599690-40599709 None:intergenic 35.0%
AAAGTAACCAAGTAGAGAAG+AGG + Chr4:40607681-40607700 MsG0480020400.01.T01:three_prime_UTR 35.0%
AAATCCAACTTTCCCATTGT+GGG - Chr4:40599689-40599708 None:intergenic 35.0%
AAATTACCAACTACTCCCTT+GGG - Chr4:40606539-40606558 None:intergenic 35.0%
AAATTCAACTTTCCCATGGT+AGG + Chr4:40601766-40601785 MsG0480020400.01.T01:intron 35.0%
AACATCTTCTTAAGCTCATC+TGG - Chr4:40605790-40605809 None:intergenic 35.0%
AACCAAATTATGAAGCCTTG+AGG + Chr4:40603452-40603471 MsG0480020400.01.T01:intron 35.0%
AACGCATTGTTAGAAGAACT+TGG - Chr4:40605937-40605956 None:intergenic 35.0%
AATACATCTCTCTGATCTGA+TGG + Chr4:40601740-40601759 MsG0480020400.01.T01:intron 35.0%
AATGCTCTTCTAACTATGGT+AGG + Chr4:40604303-40604322 MsG0480020400.01.T01:intron 35.0%
ACATGGCATCTTCATTTCAA+GGG + Chr4:40605647-40605666 MsG0480020400.01.T01:CDS 35.0%
ACCAGAGAACTTGGATAAAA+TGG + Chr4:40606889-40606908 MsG0480020400.01.T01:CDS 35.0%
ACTGCACTTGAAAGAAGATT+GGG - Chr4:40601282-40601301 None:intergenic 35.0%
ACTTCAGAAAATGCTTGACA+TGG + Chr4:40605630-40605649 MsG0480020400.01.T01:CDS 35.0%
ATAGATGCGAGTATGTGAAA+GGG - Chr4:40604584-40604603 None:intergenic 35.0%
ATATGATGCAAAGAACCTCA+AGG + Chr4:40604333-40604352 MsG0480020400.01.T01:CDS 35.0%
ATCCCATTGCAATGACAAAA+TGG - Chr4:40604058-40604077 None:intergenic 35.0%
ATGCATAAAAGAAGGTTCTG+AGG + Chr4:40604017-40604036 MsG0480020400.01.T01:CDS 35.0%
ATGGTTTAGATTTGCAACAC+GGG + Chr4:40607236-40607255 MsG0480020400.01.T01:intron 35.0%
ATGTATCCTAATACTACAGG+AGG - Chr4:40607306-40607325 None:intergenic 35.0%
ATTGTCTTCACAGATGCTTT+GGG + Chr4:40607432-40607451 MsG0480020400.01.T01:intron 35.0%
ATTTCTTCATCCTATGGATC+TGG - Chr4:40601670-40601689 None:intergenic 35.0%
CAAATTAGAATCAGTTTCGG+AGG - Chr4:40602462-40602481 None:intergenic 35.0%
CAATTATTTCGGCTTCAAGA+AGG + Chr4:40603489-40603508 MsG0480020400.01.T01:intron 35.0%
CAGGTCAAATATCAATTGAG+TGG + Chr4:40603133-40603152 MsG0480020400.01.T01:CDS 35.0%
CATCTGTGAAGACAATGAAA+AGG - Chr4:40607428-40607447 None:intergenic 35.0%
CATGGTTTAGATTTGCAACA+CGG + Chr4:40607235-40607254 MsG0480020400.01.T01:intron 35.0%
CATTGCAATGACAAAATGGA+AGG - Chr4:40604054-40604073 None:intergenic 35.0%
CGTATCAACTCCTTTATTAG+AGG - Chr4:40604824-40604843 None:intergenic 35.0%
CGTGAAGGAAGATTGTTTAA+TGG - Chr4:40600999-40601018 None:intergenic 35.0%
CTCATATACTCTCTCACATT+TGG - Chr4:40607026-40607045 None:intergenic 35.0%
CTGAACAGTTAAAGCATACA+CGG + Chr4:40603026-40603045 MsG0480020400.01.T01:CDS 35.0%
GAAATGGCATCCTTACTAAA+AGG + Chr4:40605811-40605830 MsG0480020400.01.T01:CDS 35.0%
GAAATGTACTTCACAGTCAA+GGG + Chr4:40603729-40603748 MsG0480020400.01.T01:CDS 35.0%
GAAATTGAAGAAAGATGGGT+GGG + Chr4:40601377-40601396 MsG0480020400.01.T01:intron 35.0%
GACAATTCTCTAATTATGGG+TGG + Chr4:40604674-40604693 MsG0480020400.01.T01:intron 35.0%
GACATTTACTTTCCCATGAT+GGG + Chr4:40600643-40600662 MsG0480020400.01.T01:intron 35.0%
GAGGATGCTTTAATCATATC+TGG - Chr4:40605580-40605599 None:intergenic 35.0%
GATAGAATGAATGGTCTGAT+CGG + Chr4:40603556-40603575 MsG0480020400.01.T01:intron 35.0%
GGAAGATTGTTTAATGGCAA+AGG - Chr4:40600993-40601012 None:intergenic 35.0%
GGCTAAATTTACTGAATGGT+TGG - Chr4:40607870-40607889 None:intergenic 35.0%
GGTCAAATATCAATTGAGTG+GGG + Chr4:40603135-40603154 MsG0480020400.01.T01:CDS 35.0%
GTAATAAGGGGAAAAAGAAG+AGG - Chr4:40601254-40601273 None:intergenic 35.0%
GTCATCAACTGTTTGTTTCA+GGG + Chr4:40605005-40605024 MsG0480020400.01.T01:intron 35.0%
GTGTTAGAAGAACAAAGAAC+TGG + Chr4:40607482-40607501 MsG0480020400.01.T01:CDS 35.0%
GTGTTCTCTACCTAATCTAA+TGG + Chr4:40600618-40600637 MsG0480020400.01.T01:intron 35.0%
TAAGATATGAATGGAACACG+TGG - Chr4:40600019-40600038 None:intergenic 35.0%
TAATTACAGAAGAGGAATGG+AGG - Chr4:40604869-40604888 None:intergenic 35.0%
TACTGCACTTGAAAGAAGAT+TGG - Chr4:40601283-40601302 None:intergenic 35.0%
TAGAGCCATAAATTTAAGGG+AGG - Chr4:40605128-40605147 None:intergenic 35.0%
TCATCTGTTCTTGAGCAATT+CGG - Chr4:40602008-40602027 None:intergenic 35.0%
TCCAAACTTCTTGTATCCTT+CGG - Chr4:40603284-40603303 None:intergenic 35.0%
TCTTCTCTACTTGGTTACTT+TGG - Chr4:40607682-40607701 None:intergenic 35.0%
TCTTGAAGCCGAAATAATTG+AGG - Chr4:40603489-40603508 None:intergenic 35.0%
TGAAATTGAAGAAAGATGGG+TGG + Chr4:40601376-40601395 MsG0480020400.01.T01:intron 35.0%
TGACATTTACTTTCCCATGA+TGG + Chr4:40600642-40600661 MsG0480020400.01.T01:intron 35.0%
TGCACCTAAGATTAACAAGA+TGG + Chr4:40606966-40606985 MsG0480020400.01.T01:intron 35.0%
TGCAGAATAACAAACACGTT+GGG + Chr4:40607142-40607161 MsG0480020400.01.T01:intron 35.0%
TGCATTGCTCAAATCAGAAA+CGG - Chr4:40604504-40604523 None:intergenic 35.0%
TGTATGCTTTAACTGTTCAG+CGG - Chr4:40603026-40603045 None:intergenic 35.0%
TGTCATCAACTGTTTGTTTC+AGG + Chr4:40605004-40605023 MsG0480020400.01.T01:intron 35.0%
TGTTGCAAATCTAAACCATG+CGG - Chr4:40607235-40607254 None:intergenic 35.0%
TGTTTGTTTCAGGGATACTA+AGG + Chr4:40605014-40605033 MsG0480020400.01.T01:intron 35.0%
TTAGAGATATATCACGGACA+TGG + Chr4:40607357-40607376 MsG0480020400.01.T01:intron 35.0%
TTCCTCAAGGCTTCATAATT+TGG - Chr4:40603457-40603476 None:intergenic 35.0%
TTCCTTAATGGTTCAAACTC+CGG + Chr4:40607617-40607636 MsG0480020400.01.T01:three_prime_UTR 35.0%
TTGATACGGTTGAAGTAAAC+TGG + Chr4:40604836-40604855 MsG0480020400.01.T01:intron 35.0%
TTGGGAAAATTTATCAGCCA+AGG + Chr4:40604129-40604148 MsG0480020400.01.T01:intron 35.0%
TTGTCCCAAAAAAACAAACC+AGG - Chr4:40600354-40600373 None:intergenic 35.0%
TTTGCAGATGTTCACATCAA+TGG + Chr4:40606760-40606779 MsG0480020400.01.T01:intron 35.0%
! ACCATTTTATCCAAGTTCTC+TGG - Chr4:40606893-40606912 None:intergenic 35.0%
! AGTATTGAGTGGTCAAAACA+CGG + Chr4:40600504-40600523 MsG0480020400.01.T01:intron 35.0%
! AGTTGGAATTTTCGTAAACG+TGG + Chr4:40605397-40605416 MsG0480020400.01.T01:intron 35.0%
! ATTTGGTTTCAAGCTTTCAC+CGG + Chr4:40606826-40606845 MsG0480020400.01.T01:CDS 35.0%
! CTCAAAATCAATTTTGTCGC+TGG + Chr4:40602734-40602753 MsG0480020400.01.T01:intron 35.0%
! CTCTTTCTTTTCAACTTTGG+TGG + Chr4:40599635-40599654 MsG0480020400.01.T01:intron 35.0%
! CTTCCATTTTGTCATTGCAA+TGG + Chr4:40604052-40604071 MsG0480020400.01.T01:CDS 35.0%
! CTTTAATGTTTTCCTTAGCC+TGG - Chr4:40603909-40603928 None:intergenic 35.0%
! GGTTGTATGGATTGAGAAAT+AGG - Chr4:40600764-40600783 None:intergenic 35.0%
! GTTGGAATTTTCGTAAACGT+GGG + Chr4:40605398-40605417 MsG0480020400.01.T01:intron 35.0%
! TCTGAGATTTACTTTCATCC+TGG + Chr4:40606615-40606634 MsG0480020400.01.T01:intron 35.0%
! TGCAATATGCATGCTCATTT+TGG + Chr4:40607531-40607550 MsG0480020400.01.T01:CDS 35.0%
!! AAAGCATCCTCTGAAATGAT+TGG + Chr4:40605589-40605608 MsG0480020400.01.T01:CDS 35.0%
!! AAATTAAACATGGTGGTGGT+TGG - Chr4:40600960-40600979 None:intergenic 35.0%
!! AAGAGCATTAATGCATTGCT+GGG - Chr4:40604292-40604311 None:intergenic 35.0%
!! AAGGAACAGTTGATAAAGGA+AGG + Chr4:40605033-40605052 MsG0480020400.01.T01:CDS 35.0%
!! AATTAAACATGGTGGTGGTT+GGG - Chr4:40600959-40600978 None:intergenic 35.0%
!! TTTTTAAAAAAGGGGGGACT+CGG + Chr4:40604931-40604950 MsG0480020400.01.T01:intron 35.0%
!!! AGCAAAGTTTTTTCCCACAA+TGG + Chr4:40599673-40599692 MsG0480020400.01.T01:intron 35.0%
!!! CAGTTTTGTTTAACACGAGA+AGG + Chr4:40606359-40606378 MsG0480020400.01.T01:intron 35.0%
!!! GAAGAGTCACCAAACTTTTT+TGG - Chr4:40605288-40605307 None:intergenic 35.0%
!!! GCAAAGTTTTTTCCCACAAT+GGG + Chr4:40599674-40599693 MsG0480020400.01.T01:intron 35.0%
!!! TTTTGGCTTTCATTCTTCAC+CGG + Chr4:40607548-40607567 MsG0480020400.01.T01:CDS 35.0%
AAAAAGATCCAGAAGCCATC+AGG + Chr4:40605373-40605392 MsG0480020400.01.T01:CDS 40.0%
AAAACATGAAACGCAAGCCA+TGG + Chr4:40603211-40603230 MsG0480020400.01.T01:intron 40.0%
AAAACTGATCTCCATCGCAT+TGG + Chr4:40599959-40599978 MsG0480020400.01.T01:intron 40.0%
AAGATGGTAAGATGAAGGTG+TGG + Chr4:40606982-40607001 MsG0480020400.01.T01:intron 40.0%
ACCACCAACATAAAGCTTCA+CGG + Chr4:40599808-40599827 MsG0480020400.01.T01:intron 40.0%
ACTTGAAGCTTACATGTAGC+TGG - Chr4:40604396-40604415 None:intergenic 40.0%
AGAACAAAGAACTGGTTGCT+AGG + Chr4:40607490-40607509 MsG0480020400.01.T01:CDS 40.0%
AGATGAAAGATCCAGCTATG+CGG + Chr4:40606031-40606050 MsG0480020400.01.T01:CDS 40.0%
AGCTACCAATGAAACCTAAC+CGG - Chr4:40607570-40607589 None:intergenic 40.0%
AGGAACCTCCTCCAAAAAAT+GGG - Chr4:40605678-40605697 None:intergenic 40.0%
ATACTTGAGGATGGGAAGTT+TGG - Chr4:40605985-40606004 None:intergenic 40.0%
ATCCAAGTTCTCTGGTGATA+AGG - Chr4:40606885-40606904 None:intergenic 40.0%
ATCCTTATCACCAGAGAACT+TGG + Chr4:40606880-40606899 MsG0480020400.01.T01:CDS 40.0%
ATCTTCTTAAGCTCATCTGG+TGG - Chr4:40605787-40605806 None:intergenic 40.0%
CACATACTCGCATCTATCAT+AGG + Chr4:40604587-40604606 MsG0480020400.01.T01:intron 40.0%
CATATCTGGAGACACATCTT+TGG - Chr4:40605566-40605585 None:intergenic 40.0%
CATCTTGCCAATCATTTCAG+AGG - Chr4:40605599-40605618 None:intergenic 40.0%
CATGGCATCTTCATTTCAAG+GGG + Chr4:40605648-40605667 MsG0480020400.01.T01:CDS 40.0%
CATTGTCTTCACAGATGCTT+TGG + Chr4:40607431-40607450 MsG0480020400.01.T01:intron 40.0%
CCATAAATTTAAGGGAGGCT+AGG - Chr4:40605123-40605142 None:intergenic 40.0%
CCTAGCCTCCCTTAAATTTA+TGG + Chr4:40605120-40605139 MsG0480020400.01.T01:intron 40.0%
CGAAAATTCCAACTACCTGA+TGG - Chr4:40605391-40605410 None:intergenic 40.0%
CTTGAAAGAAGATTGGGTAG+CGG - Chr4:40601276-40601295 None:intergenic 40.0%
GAAATTACCAACTACTCCCT+TGG - Chr4:40606540-40606559 None:intergenic 40.0%
GAATAATGAACAGTGAAGGG+AGG + Chr4:40601473-40601492 MsG0480020400.01.T01:intron 40.0%
GACATGGCATCTTCATTTCA+AGG + Chr4:40605646-40605665 MsG0480020400.01.T01:CDS 40.0%
GAGTAAATGAAGGGGTCAAA+AGG - Chr4:40605101-40605120 None:intergenic 40.0%
GATAGATGCGAGTATGTGAA+AGG - Chr4:40604585-40604604 None:intergenic 40.0%
GCACACCTCTTAAGAAAAGT+TGG - Chr4:40606490-40606509 None:intergenic 40.0%
GCATGCATATTGCAAAGACA+AGG - Chr4:40607525-40607544 None:intergenic 40.0%
GCTTCAAGAAGGATCCATAA+TGG + Chr4:40603500-40603519 MsG0480020400.01.T01:intron 40.0%
GGAAATGTACTTCACAGTCA+AGG + Chr4:40603728-40603747 MsG0480020400.01.T01:CDS 40.0%
GGAGTAAGTTCCACAATTCT+CGG + Chr4:40603301-40603320 MsG0480020400.01.T01:intron 40.0%
GGTCAAGCATATAAGGAACT+AGG + Chr4:40604370-40604389 MsG0480020400.01.T01:CDS 40.0%
GGTCTGATCGGAAATATACA+TGG + Chr4:40603568-40603587 MsG0480020400.01.T01:intron 40.0%
GTGCAGAATAACAAACACGT+TGG + Chr4:40607141-40607160 MsG0480020400.01.T01:intron 40.0%
GTTTCAACCTCTTCTCTACT+TGG - Chr4:40607691-40607710 None:intergenic 40.0%
TACAACCCATAACACCCAAT+CGG + Chr4:40600777-40600796 MsG0480020400.01.T01:five_prime_UTR 40.0%
TATCACGGACATGGATATAG+AGG + Chr4:40607366-40607385 MsG0480020400.01.T01:intron 40.0%
TATTCTAGCCAGACATGTAG+AGG - Chr4:40606097-40606116 None:intergenic 40.0%
TCCGAAGGATACAAGAAGTT+TGG + Chr4:40603280-40603299 MsG0480020400.01.T01:intron 40.0%
TCGAAGAGGTCAAGCATATA+AGG + Chr4:40604363-40604382 MsG0480020400.01.T01:CDS 40.0%
TCTAATTCTCCTTTCAACCC+AGG + Chr4:40605697-40605716 MsG0480020400.01.T01:CDS 40.0%
TCTGGCTAAAAGTCAGTTGA+AGG - Chr4:40602691-40602710 None:intergenic 40.0%
TGAGCAATTCGGATCAAATC+AGG - Chr4:40601997-40602016 None:intergenic 40.0%
TTCAATCATTTCGCCTCACA+AGG - Chr4:40607648-40607667 None:intergenic 40.0%
TTGTGGATGTACCGTAAACA+TGG - Chr4:40601149-40601168 None:intergenic 40.0%
! AAACATATCAGGTGTCACGT+TGG - Chr4:40605734-40605753 None:intergenic 40.0%
! AACATATCAGGTGTCACGTT+GGG - Chr4:40605733-40605752 None:intergenic 40.0%
! AAGATTGGGTAGCGGTAATA+AGG - Chr4:40601268-40601287 None:intergenic 40.0%
! AATGCAGTTGAAGTGTCTTC+TGG + Chr4:40604518-40604537 MsG0480020400.01.T01:CDS 40.0%
! AGAGGAAGATTTTTCCACCA+TGG + Chr4:40600818-40600837 MsG0480020400.01.T01:intron 40.0%
! AGATTGGGTAGCGGTAATAA+GGG - Chr4:40601267-40601286 None:intergenic 40.0%
! AGATTTTCAATCGCAGATCG+CGG + Chr4:40602267-40602286 MsG0480020400.01.T01:intron 40.0%
! ATGGTGGAAAAATCTTCCTC+TGG - Chr4:40600819-40600838 None:intergenic 40.0%
! ATTGGGTGTTATGGGTTGTA+TGG - Chr4:40600777-40600796 None:intergenic 40.0%
! CACGTTCCGATTTTTCATGA+TGG + Chr4:40603373-40603392 MsG0480020400.01.T01:intron 40.0%
! CTTGTTATGGCATTTAGGGT+GGG - Chr4:40601807-40601826 None:intergenic 40.0%
! GAGGAAAAGAGTTTTCCTCA+AGG - Chr4:40603470-40603489 None:intergenic 40.0%
! GAGGAAGATTTTTCCACCAT+GGG + Chr4:40600819-40600838 MsG0480020400.01.T01:intron 40.0%
! TCTTGTTATGGCATTTAGGG+TGG - Chr4:40601808-40601827 None:intergenic 40.0%
! TGCTTTGCAGAAGTATAAGC+TGG + Chr4:40603763-40603782 MsG0480020400.01.T01:CDS 40.0%
! TGGGTTGAAAGGAGAATTAG+AGG - Chr4:40605698-40605717 None:intergenic 40.0%
! TGTCCTGTTACTTGAAGACA+AGG + Chr4:40603983-40604002 MsG0480020400.01.T01:CDS 40.0%
! TTGCAGAAGTATAAGCTGGT+AGG + Chr4:40603767-40603786 MsG0480020400.01.T01:intron 40.0%
! TTGGCATTCCTCGCATTTTT+CGG - Chr4:40606333-40606352 None:intergenic 40.0%
! TTTTCCCACAATGGGAAAGT+TGG + Chr4:40599682-40599701 MsG0480020400.01.T01:intron 40.0%
!! ACGTGTTTGTTATTCTGCAC+AGG - Chr4:40607141-40607160 None:intergenic 40.0%
!! GAACAGTTGATAAAGGAAGG+TGG + Chr4:40605036-40605055 MsG0480020400.01.T01:CDS 40.0%
!! GAAGAGCATTAATGCATTGC+TGG - Chr4:40604293-40604312 None:intergenic 40.0%
!! GATGTAGTTTGCTGTTGTTG+TGG + Chr4:40602916-40602935 MsG0480020400.01.T01:intron 40.0%
!! GATTGAGAGTGAGTATTGAG+TGG + Chr4:40600493-40600512 MsG0480020400.01.T01:intron 40.0%
!! GTAAACTGGTCTCTAGAGTT+TGG + Chr4:40604969-40604988 MsG0480020400.01.T01:intron 40.0%
!! TAATCCAGAGTTGATGAGGA+TGG + Chr4:40602955-40602974 MsG0480020400.01.T01:CDS 40.0%
!! TCAAAGTGTCGCTGAGAATT+GGG + Chr4:40603343-40603362 MsG0480020400.01.T01:intron 40.0%
!! TGTCTAATCCAGAGTTGATG+AGG + Chr4:40602951-40602970 MsG0480020400.01.T01:CDS 40.0%
!! TTCAAAGTGTCGCTGAGAAT+TGG + Chr4:40603342-40603361 MsG0480020400.01.T01:intron 40.0%
!!! AGCATTTTCTGAAGTTCCTC+AGG - Chr4:40605625-40605644 None:intergenic 40.0%
!!! GCGGCCATTTTAAAATCTTG+AGG - Chr4:40603007-40603026 None:intergenic 40.0%
!!! TCAAAACACGGTGGTTTTGA+TGG + Chr4:40600516-40600535 MsG0480020400.01.T01:intron 40.0%
AAATATGAGCCCGGAAGTGA+TGG + Chr4:40606787-40606806 MsG0480020400.01.T01:CDS 45.0%
AACTGGTTGCTAGGAAGATC+AGG + Chr4:40607499-40607518 MsG0480020400.01.T01:CDS 45.0%
AATGAACAGTGAAGGGAGGA+CGG + Chr4:40601477-40601496 MsG0480020400.01.T01:intron 45.0%
ACAAGTGCACAACATTGACC+AGG - Chr4:40606636-40606655 None:intergenic 45.0%
AGGAGGTAGAGAGAGATTGA+GGG - Chr4:40600912-40600931 None:intergenic 45.0%
AGGGAAAGATTCTCCTACCA+TGG - Chr4:40601782-40601801 None:intergenic 45.0%
AGTAGTCCCAGTGTTTCCAA+TGG + Chr4:40607173-40607192 MsG0480020400.01.T01:intron 45.0%
ATTGAGTGGTCAAAACACGG+TGG + Chr4:40600507-40600526 MsG0480020400.01.T01:intron 45.0%
ATTTGACCCAAGGGAGTAGT+TGG + Chr4:40606530-40606549 MsG0480020400.01.T01:intron 45.0%
CACAGCTTACATGTTGGAGA+TGG - Chr4:40604101-40604120 None:intergenic 45.0%
CATGGCACAAAAATCTGCCA+TGG + Chr4:40607207-40607226 MsG0480020400.01.T01:intron 45.0%
CTCAAGGCTCTTTATCGAAG+AGG + Chr4:40604349-40604368 MsG0480020400.01.T01:CDS 45.0%
CTCTTCGATAAAGAGCCTTG+AGG - Chr4:40604351-40604370 None:intergenic 45.0%
CTGCCTTGTCTTCAAGTAAC+AGG - Chr4:40603989-40604008 None:intergenic 45.0%
GAAGGGGTCAAAAGGAAAAG+AGG - Chr4:40605093-40605112 None:intergenic 45.0%
GAGCAAGATCACACCGTAAA+AGG - Chr4:40604562-40604581 None:intergenic 45.0%
GAGGAACCTCCTCCAAAAAA+TGG - Chr4:40605679-40605698 None:intergenic 45.0%
GAGGCTAGGAGTAAATGAAG+GGG - Chr4:40605109-40605128 None:intergenic 45.0%
GCAAACATGGGAGAGCAATT+TGG + Chr4:40606809-40606828 MsG0480020400.01.T01:CDS 45.0%
GCATAGCTGGATCTTTCATC+TGG - Chr4:40606032-40606051 None:intergenic 45.0%
GGAAAAAACTTTGCTGACCC+AGG - Chr4:40599668-40599687 None:intergenic 45.0%
GGAGGCTAGGAGTAAATGAA+GGG - Chr4:40605110-40605129 None:intergenic 45.0%
GGATGAGAGATGAGAGAGAA+TGG - Chr4:40599788-40599807 None:intergenic 45.0%
GGGAAAGATTCTCCTACCAT+GGG - Chr4:40601781-40601800 None:intergenic 45.0%
GGGTCAAAAGGAAAAGAGGA+GGG - Chr4:40605089-40605108 None:intergenic 45.0%
GGTCAAAAGGAAAAGAGGAG+GGG - Chr4:40605088-40605107 None:intergenic 45.0%
GTAGTCCCAGTGTTTCCAAT+GGG + Chr4:40607174-40607193 MsG0480020400.01.T01:intron 45.0%
GTGACATGAGATGAATCCGA+AGG + Chr4:40603265-40603284 MsG0480020400.01.T01:intron 45.0%
TAATGGTTCAAACTCCGGCA+TGG + Chr4:40607622-40607641 MsG0480020400.01.T01:three_prime_UTR 45.0%
TATTCCATCATCAGCAGCTG+TGG + Chr4:40605843-40605862 MsG0480020400.01.T01:CDS 45.0%
TCGTATGTCACCTGCTGATA+TGG + Chr4:40602029-40602048 MsG0480020400.01.T01:CDS 45.0%
TGCCGGAGTTTGAACCATTA+AGG - Chr4:40607622-40607641 None:intergenic 45.0%
TGTGAATAGTGCCAATGCGA+TGG - Chr4:40599973-40599992 None:intergenic 45.0%
TTTAAAGAAGCCAGAGTGGC+AGG - Chr4:40605532-40605551 None:intergenic 45.0%
! AACTTTGGTGGCATTTAGCC+TGG + Chr4:40599647-40599666 MsG0480020400.01.T01:intron 45.0%
! ACCGTGAAGCTTTATGTTGG+TGG - Chr4:40599812-40599831 None:intergenic 45.0%
! ACGCATAGCTGCTACTTCTT+CGG - Chr4:40603098-40603117 None:intergenic 45.0%
! ACTTTGGTGGCATTTAGCCT+GGG + Chr4:40599648-40599667 MsG0480020400.01.T01:intron 45.0%
! ATGGCATTCCTGGTTTGTGT+AGG + Chr4:40604475-40604494 MsG0480020400.01.T01:intron 45.0%
! CAGTTGCGAGTTGAAGTTGA+CGG + Chr4:40601530-40601549 MsG0480020400.01.T01:intron 45.0%
! CTCTACTTGGTTACTTTGGC+AGG - Chr4:40607678-40607697 None:intergenic 45.0%
! CTTCACCGGTTAGGTTTCAT+TGG + Chr4:40607562-40607581 MsG0480020400.01.T01:CDS 45.0%
! GATTGGGTAGCGGTAATAAG+GGG - Chr4:40601266-40601285 None:intergenic 45.0%
! GCTTTCATTCTTCACCGGTT+AGG + Chr4:40607553-40607572 MsG0480020400.01.T01:CDS 45.0%
! GGAATAGATCCTGGGTTGAA+AGG - Chr4:40605709-40605728 None:intergenic 45.0%
! GTGAAGCTTTATGTTGGTGG+TGG - Chr4:40599809-40599828 None:intergenic 45.0%
! GTGGTTCTGTTCTTGAAGGT+GGG - Chr4:40600937-40600956 None:intergenic 45.0%
! TTGGGTGGTTCTGTTCTTGA+AGG - Chr4:40600941-40600960 None:intergenic 45.0%
!! CAGCTTCTGTTGTTTCCAGA+AGG - Chr4:40605240-40605259 None:intergenic 45.0%
!! TGAGCTTTTGCTGCTTCTTC+CGG - Chr4:40606848-40606867 None:intergenic 45.0%
!!! CAAGGGGACAACCCATTTTT+TGG + Chr4:40605664-40605683 MsG0480020400.01.T01:CDS 45.0%
!!! GACAACCCATTTTTTGGAGG+AGG + Chr4:40605670-40605689 MsG0480020400.01.T01:CDS 45.0%
!! ATATAATATACAAATATAAT+TGG - Chr4:40606309-40606328 None:intergenic 5.0%
!!! ATAACTTATTTTTTAAAAAA+GGG + Chr4:40604922-40604941 MsG0480020400.01.T01:intron 5.0%
!!! ATTTAAAATTAAATTTTACA+GGG + Chr4:40603707-40603726 MsG0480020400.01.T01:intron 5.0%
AAATGTCGATCCTGCCACTC+TGG + Chr4:40605519-40605538 MsG0480020400.01.T01:CDS 50.0%
AACCCATAACACCCAATCGG+TGG + Chr4:40600780-40600799 MsG0480020400.01.T01:intron 50.0%
AACCCCACCTCAACTTTGGT+AGG + Chr4:40600690-40600709 MsG0480020400.01.T01:intron 50.0%
AACGGCTTCCTACACAAACC+AGG - Chr4:40604486-40604505 None:intergenic 50.0%
AAGAAAGATGGGTGGGAGAG+AGG + Chr4:40601384-40601403 MsG0480020400.01.T01:intron 50.0%
ACACCCAATCGGTGGCATTT+AGG + Chr4:40600788-40600807 MsG0480020400.01.T01:intron 50.0%
ACGTTGGGAGGAATAGATCC+TGG - Chr4:40605718-40605737 None:intergenic 50.0%
AGAAAGATGGGTGGGAGAGA+GGG + Chr4:40601385-40601404 MsG0480020400.01.T01:intron 50.0%
AGAAGCAGCAAAAGCTCAGC+AGG + Chr4:40606850-40606869 MsG0480020400.01.T01:CDS 50.0%
AGAGAGAGATTGAGGGGATC+TGG - Chr4:40600905-40600924 None:intergenic 50.0%
AGCACTCAGTGTGGTCTCAT+TGG + Chr4:40602657-40602676 MsG0480020400.01.T01:intron 50.0%
AGGAGGGGAACACATACTTC+TGG - Chr4:40605073-40605092 None:intergenic 50.0%
AGGGTGTACTCCGAGAATTG+TGG - Chr4:40603314-40603333 None:intergenic 50.0%
AGTGTTTCCAATGGGTGGGA+TGG + Chr4:40607182-40607201 MsG0480020400.01.T01:intron 50.0%
AGTTGAGGTGGGGTTTAGCA+TGG - Chr4:40600685-40600704 None:intergenic 50.0%
ATCCCACCCATTGGAAACAC+TGG - Chr4:40607183-40607202 None:intergenic 50.0%
ATGAACAGTGAAGGGAGGAC+GGG + Chr4:40601478-40601497 MsG0480020400.01.T01:intron 50.0%
CACCCAATCGGTGGCATTTA+GGG + Chr4:40600789-40600808 MsG0480020400.01.T01:intron 50.0%
CACTGGTATACGGGACTAGA+GGG - Chr4:40606170-40606189 None:intergenic 50.0%
CCAATCTCAGCCATCTCTTC+AGG - Chr4:40603052-40603071 None:intergenic 50.0%
CCATGTTTGCCATCACTTCC+GGG - Chr4:40606799-40606818 None:intergenic 50.0%
CCCATGTTTGCCATCACTTC+CGG - Chr4:40606800-40606819 None:intergenic 50.0%
CCGGAAGTGATGGCAAACAT+GGG + Chr4:40606797-40606816 MsG0480020400.01.T01:CDS 50.0%
CCTGAAGAGATGGCTGAGAT+TGG + Chr4:40603049-40603068 MsG0480020400.01.T01:CDS 50.0%
CGTTGGGAGGAATAGATCCT+GGG - Chr4:40605717-40605736 None:intergenic 50.0%
CTAGCCAGACATGTAGAGGA+AGG - Chr4:40606093-40606112 None:intergenic 50.0%
GAAGACGAGAATGTGCCTTC+TGG + Chr4:40605222-40605241 MsG0480020400.01.T01:CDS 50.0%
GAAGCCATCCTCATCAACTC+TGG - Chr4:40602962-40602981 None:intergenic 50.0%
GAGGAGGTAGAGAGAGATTG+AGG - Chr4:40600913-40600932 None:intergenic 50.0%
GATTGGCAAGATGTCACCTG+AGG + Chr4:40605606-40605625 MsG0480020400.01.T01:CDS 50.0%
GCACTCAGTGTGGTCTCATT+GGG + Chr4:40602658-40602677 MsG0480020400.01.T01:intron 50.0%
GCATCCTTCCTCTACATGTC+TGG + Chr4:40606086-40606105 MsG0480020400.01.T01:intron 50.0%
GCTAAACCCCACCTCAACTT+TGG + Chr4:40600686-40600705 MsG0480020400.01.T01:intron 50.0%
GGAGATGAAGATTTCGACGC+CGG + Chr4:40601593-40601612 MsG0480020400.01.T01:intron 50.0%
GGAGGGGAACACATACTTCT+GGG - Chr4:40605072-40605091 None:intergenic 50.0%
GGAGGTAGAGAGAGATTGAG+GGG - Chr4:40600911-40600930 None:intergenic 50.0%
GGCTGAGATGTTGAAGAACC+AGG + Chr4:40603156-40603175 MsG0480020400.01.T01:CDS 50.0%
GGGAGGCTAGGAGTAAATGA+AGG - Chr4:40605111-40605130 None:intergenic 50.0%
GGGGTCAAAAGGAAAAGAGG+AGG - Chr4:40605090-40605109 None:intergenic 50.0%
GGGTTTAGCATGGGAATGGA+GGG - Chr4:40600675-40600694 None:intergenic 50.0%
GTTGAGGTGGGGTTTAGCAT+GGG - Chr4:40600684-40600703 None:intergenic 50.0%
TCACTGGTATACGGGACTAG+AGG - Chr4:40606171-40606190 None:intergenic 50.0%
TCATCAGTGCCATGCCTAGT+AGG + Chr4:40607269-40607288 MsG0480020400.01.T01:intron 50.0%
TCCAACTACCTGATGGCTTC+TGG - Chr4:40605384-40605403 None:intergenic 50.0%
TCCAGAAGCCATCAGGTAGT+TGG + Chr4:40605380-40605399 MsG0480020400.01.T01:intron 50.0%
TCCCACCCATTGGAAACACT+GGG - Chr4:40607182-40607201 None:intergenic 50.0%
TCCCAGTGTTTCCAATGGGT+GGG + Chr4:40607178-40607197 MsG0480020400.01.T01:intron 50.0%
TCTGTTCTTGAAGGTGGGAG+AGG - Chr4:40600932-40600951 None:intergenic 50.0%
TGTCACCTGCTGATATGGCT+CGG + Chr4:40602034-40602053 MsG0480020400.01.T01:CDS 50.0%
TTGTCCACAGCTGCTGATGA+TGG - Chr4:40605850-40605869 None:intergenic 50.0%
! AAAAGCACGAGTGGTGCTTG+AGG - Chr4:40605908-40605927 None:intergenic 50.0%
! ATATCAGGTGTCACGTTGGG+AGG - Chr4:40605730-40605749 None:intergenic 50.0%
! ATGCCACCGATTGGGTGTTA+TGG - Chr4:40600786-40600805 None:intergenic 50.0%
! ATGGCATTTAGGGTGGGACA+GGG - Chr4:40601801-40601820 None:intergenic 50.0%
! CACCCTAAATGCCACCGATT+GGG - Chr4:40600794-40600813 None:intergenic 50.0%
! CGCATAGCTGCTACTTCTTC+GGG - Chr4:40603097-40603116 None:intergenic 50.0%
! GATGAAGGTGTGGCCATACT+AGG + Chr4:40606992-40607011 MsG0480020400.01.T01:intron 50.0%
! GGAGGGTTGTTTCCCATCAT+GGG - Chr4:40600658-40600677 None:intergenic 50.0%
! GGCTGAGATTGGTCAGAAGA+TGG + Chr4:40603060-40603079 MsG0480020400.01.T01:CDS 50.0%
! GGGACCGTGAAGCTTTATGT+TGG - Chr4:40599815-40599834 None:intergenic 50.0%
! GGTGATGATGTGTTGGTGGA+GGG + Chr4:40601629-40601648 MsG0480020400.01.T01:intron 50.0%
! GGTGGTTCTGTTCTTGAAGG+TGG - Chr4:40600938-40600957 None:intergenic 50.0%
! GTCTTCACAGATGCTTTGGG+CGG + Chr4:40607435-40607454 MsG0480020400.01.T01:intron 50.0%
! TATGGCATTTAGGGTGGGAC+AGG - Chr4:40601802-40601821 None:intergenic 50.0%
! TATGGCTCGGATCCAACAAC+AGG + Chr4:40602047-40602066 MsG0480020400.01.T01:CDS 50.0%
! TCAAGCACCACTCGTGCTTT+TGG + Chr4:40605907-40605926 MsG0480020400.01.T01:CDS 50.0%
! TGCCACCGATTGGGTGTTAT+GGG - Chr4:40600785-40600804 None:intergenic 50.0%
! TGGAGGGTTGTTTCCCATCA+TGG - Chr4:40600659-40600678 None:intergenic 50.0%
! TGGTTCTCCAAAAGCACGAG+TGG - Chr4:40605917-40605936 None:intergenic 50.0%
!! CATGGCACTGATGACATGCT+AGG - Chr4:40607263-40607282 None:intergenic 50.0%
!! TAAACATGGTGGTGGTTGGG+TGG - Chr4:40600956-40600975 None:intergenic 50.0%
!! TTTGATGGTGTTGCAGCCTC+TGG + Chr4:40600531-40600550 MsG0480020400.01.T01:intron 50.0%
!!! GGGGACAACCCATTTTTTGG+AGG + Chr4:40605667-40605686 MsG0480020400.01.T01:CDS 50.0%
ACTTACCAACCCACCACCAG+AGG - Chr4:40600550-40600569 None:intergenic 55.0%
AGGTGCGCCTACCAAAGTTG+AGG - Chr4:40600700-40600719 None:intergenic 55.0%
ATCTAAACCATGCGGCGCCA+TGG - Chr4:40607227-40607246 None:intergenic 55.0%
CACGAGTGGTGCTTGAGGAT+GGG - Chr4:40605903-40605922 None:intergenic 55.0%
CCAATCGGTGGCATTTAGGG+TGG + Chr4:40600792-40600811 MsG0480020400.01.T01:intron 55.0%
CCACCCTAAATGCCACCGAT+TGG - Chr4:40600795-40600814 None:intergenic 55.0%
CCATGCCTAGTAGGACCATG+GGG + Chr4:40607278-40607297 MsG0480020400.01.T01:intron 55.0%
CCCGGAAGTGATGGCAAACA+TGG + Chr4:40606796-40606815 MsG0480020400.01.T01:CDS 55.0%
CGCCTACCAAAGTTGAGGTG+GGG - Chr4:40600695-40600714 None:intergenic 55.0%
GAAAGATCCAGCTATGCGGC+AGG + Chr4:40606035-40606054 MsG0480020400.01.T01:CDS 55.0%
GAACATACCTGCCGCATAGC+TGG - Chr4:40606045-40606064 None:intergenic 55.0%
GAGTGTGGGAGTGAACAACG+GGG + Chr4:40601501-40601520 MsG0480020400.01.T01:intron 55.0%
GCATACACGGCCTGAAGAGA+TGG + Chr4:40603039-40603058 MsG0480020400.01.T01:CDS 55.0%
GCCATGCCTAGTAGGACCAT+GGG + Chr4:40607277-40607296 MsG0480020400.01.T01:intron 55.0%
GCGCCTACCAAAGTTGAGGT+GGG - Chr4:40600696-40600715 None:intergenic 55.0%
GGAGTGTGGGAGTGAACAAC+GGG + Chr4:40601500-40601519 MsG0480020400.01.T01:intron 55.0%
GGGGTTTAGCATGGGAATGG+AGG - Chr4:40600676-40600695 None:intergenic 55.0%
GGTGGGGTTTAGCATGGGAA+TGG - Chr4:40600679-40600698 None:intergenic 55.0%
GTCCCAGTGTTTCCAATGGG+TGG + Chr4:40607177-40607196 MsG0480020400.01.T01:intron 55.0%
GTTCTTGAAGGTGGGAGAGG+AGG - Chr4:40600929-40600948 None:intergenic 55.0%
TGAACAGTGAAGGGAGGACG+GGG + Chr4:40601479-40601498 MsG0480020400.01.T01:intron 55.0%
TGAAGTTGACGGAGAGGTCG+AGG + Chr4:40601541-40601560 MsG0480020400.01.T01:intron 55.0%
TGCCATGCCTAGTAGGACCA+TGG + Chr4:40607276-40607295 MsG0480020400.01.T01:intron 55.0%
TGCGCCTACCAAAGTTGAGG+TGG - Chr4:40600697-40600716 None:intergenic 55.0%
TGGATCCGAGCCATATCAGC+AGG - Chr4:40602042-40602061 None:intergenic 55.0%
! AGACGGCGGTGATGATGTGT+TGG + Chr4:40601622-40601641 MsG0480020400.01.T01:intron 55.0%
! CGGTGATGATGTGTTGGTGG+AGG + Chr4:40601628-40601647 MsG0480020400.01.T01:intron 55.0%
! GCGAGTTGAAGTTGACGGAG+AGG + Chr4:40601535-40601554 MsG0480020400.01.T01:intron 55.0%
! GGGAGTGTGGGAGTGAACAA+CGG + Chr4:40601499-40601518 MsG0480020400.01.T01:intron 55.0%
! GGGGTGCCTCCTGTAGTATT+AGG + Chr4:40607297-40607316 MsG0480020400.01.T01:intron 55.0%
! GTCGGAAGGGATAACGGTGT+CGG + Chr4:40601572-40601591 MsG0480020400.01.T01:intron 55.0%
! TGGCATTTAGGGTGGACCAG+AGG + Chr4:40600800-40600819 MsG0480020400.01.T01:intron 55.0%
!! ATACTACAGGAGGCACCCCA+TGG - Chr4:40607296-40607315 None:intergenic 55.0%
AAATCTGCCATGGCGCCGCA+TGG + Chr4:40607217-40607236 MsG0480020400.01.T01:intron 60.0%
AGATGGGTGGGAGAGAGGGT+TGG + Chr4:40601389-40601408 MsG0480020400.01.T01:intron 60.0%
AGGCACCCCATGGTCCTACT+AGG - Chr4:40607286-40607305 None:intergenic 60.0%
CCAATGGGTGGGATGGCACA+TGG + Chr4:40607189-40607208 MsG0480020400.01.T01:intron 60.0%
CCATGTGCCATCCCACCCAT+TGG - Chr4:40607192-40607211 None:intergenic 60.0%
CCCCATGGTCCTACTAGGCA+TGG - Chr4:40607281-40607300 None:intergenic 60.0%
GAAGATTTCGACGCCGGCGT+CGG + Chr4:40601599-40601618 MsG0480020400.01.T01:intron 60.0%
GCACGAGTGGTGCTTGAGGA+TGG - Chr4:40605904-40605923 None:intergenic 60.0%
GCGTGCTCATGCTGATGCTC+AGG + Chr4:40603114-40603133 MsG0480020400.01.T01:CDS 60.0%
GTGTTGCAGCCTCTGGTGGT+GGG + Chr4:40600538-40600557 MsG0480020400.01.T01:intron 60.0%
GTTGACGGAGAGGTCGAGGA+AGG + Chr4:40601545-40601564 MsG0480020400.01.T01:intron 60.0%
TGGGCGGACAGGCTTCAAAG+AGG + Chr4:40607451-40607470 MsG0480020400.01.T01:CDS 60.0%
TGTGGGAGTGAACAACGGGG+AGG + Chr4:40601504-40601523 MsG0480020400.01.T01:intron 60.0%
TTCGCCTCACAAGGCCATGC+CGG - Chr4:40607639-40607658 None:intergenic 60.0%
! CACAGATGCTTTGGGCGGAC+AGG + Chr4:40607440-40607459 MsG0480020400.01.T01:intron 60.0%
! CGGCGGTGATGATGTGTTGG+TGG + Chr4:40601625-40601644 MsG0480020400.01.T01:intron 60.0%
!! AACTCCGGCATGGCCTTGTG+AGG + Chr4:40607632-40607651 MsG0480020400.01.T01:three_prime_UTR 60.0%
!! GATGGTGTTGCAGCCTCTGG+TGG + Chr4:40600534-40600553 MsG0480020400.01.T01:intron 60.0%
!! GGAGGCGTCGGAAGGGATAA+CGG + Chr4:40601566-40601585 MsG0480020400.01.T01:intron 60.0%
GACGGAGAGGTCGAGGAAGG+AGG + Chr4:40601548-40601567 MsG0480020400.01.T01:intron 65.0%
TGAAGGGAGGACGGGGAGTG+TGG + Chr4:40601486-40601505 MsG0480020400.01.T01:intron 65.0%
! GAAGGGAGGACGGGGAGTGT+GGG + Chr4:40601487-40601506 MsG0480020400.01.T01:intron 65.0%
! GAGGTCGAGGAAGGAGGCGT+CGG + Chr4:40601554-40601573 MsG0480020400.01.T01:intron 65.0%
! GGTGTTGCAGCCTCTGGTGG+TGG + Chr4:40600537-40600556 MsG0480020400.01.T01:intron 65.0%
!! CGAGGAAGGAGGCGTCGGAA+GGG + Chr4:40601559-40601578 MsG0480020400.01.T01:intron 65.0%
!! TCGAGGAAGGAGGCGTCGGA+AGG + Chr4:40601558-40601577 MsG0480020400.01.T01:intron 65.0%
!! TGCAGCCTCTGGTGGTGGGT+TGG + Chr4:40600542-40600561 MsG0480020400.01.T01:intron 65.0%
ATCACCGCCGTCTCCGACGC+CGG - Chr4:40601615-40601634 None:intergenic 70.0%
! TTCGACGCCGGCGTCGGAGA+CGG + Chr4:40601605-40601624 MsG0480020400.01.T01:intron 70.0%
!! GACGCCGGCGTCGGAGACGG+CGG + Chr4:40601608-40601627 MsG0480020400.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 40599614 40608012 40599614 ID=MsG0480020400.01;Name=MsG0480020400.01
Chr4 mRNA 40599614 40608012 40599614 ID=MsG0480020400.01.T01;Parent=MsG0480020400.01;Name=MsG0480020400.01.T01;_AED=0.40;_eAED=0.42;_QI=303|0.91|0.92|1|0.83|0.76|13|421|610
Chr4 exon 40599614 40599653 40599614 ID=MsG0480020400.01.T01:exon:4886;Parent=MsG0480020400.01.T01
Chr4 exon 40600700 40600798 40600700 ID=MsG0480020400.01.T01:exon:4887;Parent=MsG0480020400.01.T01
Chr4 exon 40601809 40602068 40601809 ID=MsG0480020400.01.T01:exon:4888;Parent=MsG0480020400.01.T01
Chr4 five_prime_UTR 40599614 40599653 40599614 ID=MsG0480020400.01.T01:five_prime_utr;Parent=MsG0480020400.01.T01
Chr4 five_prime_UTR 40600700 40600798 40600700 ID=MsG0480020400.01.T01:five_prime_utr;Parent=MsG0480020400.01.T01
Chr4 five_prime_UTR 40601809 40601972 40601809 ID=MsG0480020400.01.T01:five_prime_utr;Parent=MsG0480020400.01.T01
Chr4 CDS 40601973 40602068 40601973 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40602947 40603177 40602947 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40603728 40603784 40603728 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40603910 40604110 40603910 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40604325 40604402 40604325 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40604497 40604567 40604497 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40605026 40605075 40605026 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40605196 40605394 40605196 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40605498 40606056 40605498 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40606767 40606910 40606767 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 CDS 40607445 40607591 40607445 ID=MsG0480020400.01.T01:cds;Parent=MsG0480020400.01.T01
Chr4 three_prime_UTR 40607592 40608012 40607592 ID=MsG0480020400.01.T01:three_prime_utr;Parent=MsG0480020400.01.T01
Chr4 mRNA 40601773 40608012 40601773 ID=MsG0480020400.01.T02;Parent=MsG0480020400.01;Name=MsG0480020400.01.T02;_AED=0.40;_eAED=0.42;_QI=200|0.9|0.90|1|1|1|11|421|610
Chr4 exon 40601773 40602068 40601773 ID=MsG0480020400.01.T02:exon:4899;Parent=MsG0480020400.01.T02
Chr4 five_prime_UTR 40601773 40601972 40601773 ID=MsG0480020400.01.T02:five_prime_utr;Parent=MsG0480020400.01.T02
Chr4 CDS 40601973 40602068 40601973 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40602947 40603177 40602947 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40603728 40603784 40603728 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40603910 40604110 40603910 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40604325 40604402 40604325 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40604497 40604567 40604497 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40605026 40605075 40605026 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40605196 40605394 40605196 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40605498 40606056 40605498 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40606767 40606910 40606767 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 CDS 40607445 40607591 40607445 ID=MsG0480020400.01.T02:cds;Parent=MsG0480020400.01.T02
Chr4 three_prime_UTR 40607592 40608012 40607592 ID=MsG0480020400.01.T02:three_prime_utr;Parent=MsG0480020400.01.T02
Gene Sequence

>MsG0480020400.01.T01

ATGTTTAACGGTATGATGGATCCTGATTTGATCCGAATTGCTCAAGAACAGATGAGTCGTATGTCACCTGCTGATATGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCTTCAGAAAGCATGAAGAATATGAATCCTCAAGATTTTAAAATGGCCGCTGAACAGTTAAAGCATACACGGCCTGAAGAGATGGCTGAGATTGGTCAGAAGATGGCTAATGCATCGCCCGAAGAAGTAGCAGCTATGCGTGCTCATGCTGATGCTCAGGTCAAATATCAATTGAGTGGGGCTGAGATGTTGAAGAACCAGGGAAATGTACTTCACAGTCAAGGGAAGTTCGACGATGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAACATTAAAGAGATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCGCTGTCACTAAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATGAAGAATGCATAAAAGAAGGTTCTGAGGTACACATAATTCCTTCCATTTTGTCATTGCAATGGGATGTTAATTATAATTTTAATTGCCATCTCCAACATGTTTTAGTATATGATGCAAAGAACCTCAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGCCAGCTACATGAAGCCGTTTCTGATTTGAGCAATGCAGTTGAAGTGTCTTCTGGCGATGATACAATTGCAGACCTTTTACGGGATACTAAGGAACAGTTGATAAAGGAAGGTGGTGATCGTGCACCCAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGACGAGAATGTGCCTTCTGGAAACAACAGAAGCTGCTCTTCTGAACAAAAAGTTGATCAACCAAAAAAGTTTGGTGACTCTTCTAAGAGTAAAAGTATAGCTAACAATGGGAATCCGAAATCAACTTCAGAGAGTTTAGATGCACTGAAAAAAGATCCAGAAGCCATCAGATCATTCCAAAACTTCATTTCAAATGTCGATCCTGCCACTCTGGCTTCTTTAAATAATGGACAATCCAAAGATGTGTCTCCAGATATGATTAAAGCATCCTCTGAAATGATTGGCAAGATGTCACCTGAGGAACTTCAGAAAATGCTTGACATGGCATCTTCATTTCAAGGGGACAACCCATTTTTTGGAGGAGGTTCCTCTAATTCTCCTTTCAACCCAGGATCTATTCCTCCCAACGTGACACCTGATATGTTTAAAACTGCAAGTGATATGATGAGTAAAATGCCACCAGATGAGCTTAAGAAGATGTTTGAAATGGCATCCTTACTAAAAGGGAAAGAATCTATTCCATCATCAGCAGCTGTGGACAAGAATGAAAGAAATGTTTCACAGTCAAACTTCCCATCCTCAAGCACCACTCGTGCTTTTGGAGAACCAAGTTCTTCTAACAATGCGTTTTCAAATATTAGAAATGCTTCAGAGCCAAACTTCCCATCCTCAAGTATTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGGTTAAAAATATGAGCCCGGAAGTGATGGCAAACATGGGAGAGCAATTTGGTTTCAAGCTTTCACCGGAAGAAGCAGCAAAAGCTCAGCAGGCGATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGCTTCAAAGAGGAGCTGAATGTGTTAGAAGAACAAAGAACTGGTTGCTAGGAAGATCAGGCCTTGTCTTTGCAATATGCATGCTCATTTTGGCTTTCATTCTTCACCGGTTAGGTTTCATTGGTAGCTAG

>MsG0480020400.01.T02

ATGTTTAACGGTATGATGGATCCTGATTTGATCCGAATTGCTCAAGAACAGATGAGTCGTATGTCACCTGCTGATATGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTGATGAGGATGGCTTCAGAAAGCATGAAGAATATGAATCCTCAAGATTTTAAAATGGCCGCTGAACAGTTAAAGCATACACGGCCTGAAGAGATGGCTGAGATTGGTCAGAAGATGGCTAATGCATCGCCCGAAGAAGTAGCAGCTATGCGTGCTCATGCTGATGCTCAGGTCAAATATCAATTGAGTGGGGCTGAGATGTTGAAGAACCAGGGAAATGTACTTCACAGTCAAGGGAAGTTCGACGATGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAACATTAAAGAGATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCGCTGTCACTAAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATGAAGAATGCATAAAAGAAGGTTCTGAGGTACACATAATTCCTTCCATTTTGTCATTGCAATGGGATGTTAATTATAATTTTAATTGCCATCTCCAACATGTTTTAGTATATGATGCAAAGAACCTCAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGCCAGCTACATGAAGCCGTTTCTGATTTGAGCAATGCAGTTGAAGTGTCTTCTGGCGATGATACAATTGCAGACCTTTTACGGGATACTAAGGAACAGTTGATAAAGGAAGGTGGTGATCGTGCACCCAGAAAATTAGTAATTGAAGAAATAACTGAAGAAGACGAGAATGTGCCTTCTGGAAACAACAGAAGCTGCTCTTCTGAACAAAAAGTTGATCAACCAAAAAAGTTTGGTGACTCTTCTAAGAGTAAAAGTATAGCTAACAATGGGAATCCGAAATCAACTTCAGAGAGTTTAGATGCACTGAAAAAAGATCCAGAAGCCATCAGATCATTCCAAAACTTCATTTCAAATGTCGATCCTGCCACTCTGGCTTCTTTAAATAATGGACAATCCAAAGATGTGTCTCCAGATATGATTAAAGCATCCTCTGAAATGATTGGCAAGATGTCACCTGAGGAACTTCAGAAAATGCTTGACATGGCATCTTCATTTCAAGGGGACAACCCATTTTTTGGAGGAGGTTCCTCTAATTCTCCTTTCAACCCAGGATCTATTCCTCCCAACGTGACACCTGATATGTTTAAAACTGCAAGTGATATGATGAGTAAAATGCCACCAGATGAGCTTAAGAAGATGTTTGAAATGGCATCCTTACTAAAAGGGAAAGAATCTATTCCATCATCAGCAGCTGTGGACAAGAATGAAAGAAATGTTTCACAGTCAAACTTCCCATCCTCAAGCACCACTCGTGCTTTTGGAGAACCAAGTTCTTCTAACAATGCGTTTTCAAATATTAGAAATGCTTCAGAGCCAAACTTCCCATCCTCAAGTATTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGGTTAAAAATATGAGCCCGGAAGTGATGGCAAACATGGGAGAGCAATTTGGTTTCAAGCTTTCACCGGAAGAAGCAGCAAAAGCTCAGCAGGCGATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGCTTCAAAGAGGAGCTGAATGTGTTAGAAGAACAAAGAACTGGTTGCTAGGAAGATCAGGCCTTGTCTTTGCAATATGCATGCTCATTTTGGCTTTCATTCTTCACCGGTTAGGTTTCATTGGTAGCTAG
Protein sequence

>MsG0480020400.01.T01

MFNGMMDPDLIRIAQEQMSRMSPADMARIQQQMMSNPELMRMASESMKNMNPQDFKMAAEQLKHTRPEEMAEIGQKMANASPEEVAAMRAHADAQVKYQLSGAEMLKNQGNVLHSQGKFDDALQKYKLAKENIKEIPSFQSRKLLLALSLNLMSCYLKTRQYEECIKEGSEVHIIPSILSLQWDVNYNFNCHLQHVLVYDAKNLKALYRRGQAYKELGQLHEAVSDLSNAVEVSSGDDTIADLLRDTKEQLIKEGGDRAPRKLVIEEITEEDENVPSGNNRSCSSEQKVDQPKKFGDSSKSKSIANNGNPKSTSESLDALKKDPEAIRSFQNFISNVDPATLASLNNGQSKDVSPDMIKASSEMIGKMSPEELQKMLDMASSFQGDNPFFGGGSSNSPFNPGSIPPNVTPDMFKTASDMMSKMPPDELKKMFEMASLLKGKESIPSSAAVDKNERNVSQSNFPSSSTTRAFGEPSSSNNAFSNIRNASEPNFPSSSIDLQEQMRNQMKDPAMRQMFTSMVKNMSPEVMANMGEQFGFKLSPEEAAKAQQAMSSLSPENLDKMMLWADRLQRGAECVRRTKNWLLGRSGLVFAICMLILAFILHRLGFIGS*

>MsG0480020400.01.T02

MFNGMMDPDLIRIAQEQMSRMSPADMARIQQQMMSNPELMRMASESMKNMNPQDFKMAAEQLKHTRPEEMAEIGQKMANASPEEVAAMRAHADAQVKYQLSGAEMLKNQGNVLHSQGKFDDALQKYKLAKENIKEIPSFQSRKLLLALSLNLMSCYLKTRQYEECIKEGSEVHIIPSILSLQWDVNYNFNCHLQHVLVYDAKNLKALYRRGQAYKELGQLHEAVSDLSNAVEVSSGDDTIADLLRDTKEQLIKEGGDRAPRKLVIEEITEEDENVPSGNNRSCSSEQKVDQPKKFGDSSKSKSIANNGNPKSTSESLDALKKDPEAIRSFQNFISNVDPATLASLNNGQSKDVSPDMIKASSEMIGKMSPEELQKMLDMASSFQGDNPFFGGGSSNSPFNPGSIPPNVTPDMFKTASDMMSKMPPDELKKMFEMASLLKGKESIPSSAAVDKNERNVSQSNFPSSSTTRAFGEPSSSNNAFSNIRNASEPNFPSSSIDLQEQMRNQMKDPAMRQMFTSMVKNMSPEVMANMGEQFGFKLSPEEAAKAQQAMSSLSPENLDKMMLWADRLQRGAECVRRTKNWLLGRSGLVFAICMLILAFILHRLGFIGS*