Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020976.01.T01 | XP_003606673.1 | 96.094 | 640 | 15 | 3 | 1 | 636 | 19 | 652 | 0 | 1261 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020976.01.T01 | Q9XE58 | 55.973 | 452 | 190 | 6 | 192 | 636 | 318 | 767 | 1.81E-176 | 523 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020976.01.T01 | G7JUU0 | 96.094 | 640 | 15 | 3 | 1 | 636 | 19 | 652 | 0.0 | 1261 |
Gene ID | Type | Classification |
---|---|---|
MsG0480020976.01.T01 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048177.01 | MsG0480020976.01 | 0.801236 | 9.903534e-49 | 4.705621e-46 |
MsG0180003241.01 | MsG0480020976.01 | 0.806792 | 6.926375e-50 | 3.793688e-47 |
MsG0380014913.01 | MsG0480020976.01 | 0.836451 | 9.288261e-57 | 1.170995e-53 |
MsG0480020976.01 | MsG0780040516.01 | 0.831357 | 1.747202e-55 | 1.891497e-52 |
MsG0280006936.01 | MsG0480020976.01 | 0.828889 | 6.994592e-55 | 7.043416e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020976.01.T01 | MTR_4g064200 | 96.094 | 640 | 15 | 3 | 1 | 636 | 19 | 652 | 0.0 | 1261 |
MsG0480020976.01.T01 | MTR_2g097463 | 59.295 | 624 | 206 | 12 | 48 | 636 | 47 | 657 | 0.0 | 721 |
MsG0480020976.01.T01 | MTR_2g097467 | 59.098 | 621 | 213 | 11 | 47 | 636 | 46 | 656 | 0.0 | 713 |
MsG0480020976.01.T01 | MTR_2g097473 | 57.508 | 626 | 225 | 11 | 42 | 636 | 41 | 656 | 0.0 | 703 |
MsG0480020976.01.T01 | MTR_7g062120 | 44.475 | 733 | 298 | 17 | 4 | 636 | 19 | 742 | 0.0 | 567 |
MsG0480020976.01.T01 | MTR_4g064160 | 56.303 | 476 | 185 | 9 | 171 | 636 | 224 | 686 | 0.0 | 529 |
MsG0480020976.01.T01 | MTR_4g064120 | 47.143 | 630 | 268 | 16 | 45 | 636 | 26 | 628 | 1.06e-178 | 521 |
MsG0480020976.01.T01 | MTR_4g064150 | 54.601 | 489 | 198 | 11 | 159 | 636 | 260 | 735 | 4.16e-177 | 521 |
MsG0480020976.01.T01 | MTR_4g064180 | 46.730 | 627 | 275 | 14 | 45 | 636 | 26 | 628 | 9.96e-175 | 511 |
MsG0480020976.01.T01 | MTR_2g097410 | 55.076 | 463 | 183 | 9 | 186 | 636 | 294 | 743 | 2.73e-173 | 511 |
MsG0480020976.01.T01 | MTR_2g097390 | 40.829 | 627 | 296 | 14 | 52 | 636 | 50 | 643 | 1.44e-148 | 444 |
MsG0480020976.01.T01 | MTR_2g097310 | 49.318 | 440 | 202 | 6 | 202 | 636 | 217 | 640 | 2.88e-148 | 444 |
MsG0480020976.01.T01 | MTR_2g097350 | 48.140 | 457 | 214 | 8 | 187 | 636 | 202 | 642 | 3.75e-146 | 438 |
MsG0480020976.01.T01 | MTR_2g097380 | 45.517 | 435 | 183 | 5 | 202 | 636 | 183 | 563 | 7.10e-130 | 394 |
MsG0480020976.01.T01 | MTR_5g097480 | 33.245 | 376 | 246 | 4 | 261 | 633 | 170 | 543 | 1.12e-64 | 223 |
MsG0480020976.01.T01 | MTR_2g026250 | 31.630 | 411 | 271 | 6 | 227 | 633 | 191 | 595 | 6.97e-64 | 222 |
MsG0480020976.01.T01 | MTR_2g082090 | 32.708 | 373 | 246 | 4 | 264 | 633 | 208 | 578 | 5.55e-61 | 213 |
MsG0480020976.01.T01 | MTR_1g029420 | 33.333 | 369 | 241 | 4 | 268 | 633 | 225 | 591 | 9.49e-61 | 213 |
MsG0480020976.01.T01 | MTR_3g089055 | 31.707 | 369 | 247 | 4 | 268 | 633 | 198 | 564 | 3.97e-58 | 205 |
MsG0480020976.01.T01 | MTR_3g089055 | 31.707 | 369 | 247 | 4 | 268 | 633 | 203 | 569 | 4.24e-58 | 205 |
MsG0480020976.01.T01 | MTR_4g133660 | 32.626 | 377 | 246 | 6 | 263 | 634 | 170 | 543 | 5.16e-57 | 202 |
MsG0480020976.01.T01 | MTR_4g104020 | 32.642 | 386 | 231 | 9 | 265 | 633 | 146 | 519 | 9.26e-57 | 201 |
MsG0480020976.01.T01 | MTR_3g056110 | 31.510 | 384 | 254 | 7 | 255 | 633 | 162 | 541 | 2.27e-56 | 200 |
MsG0480020976.01.T01 | MTR_5g094450 | 30.769 | 377 | 252 | 5 | 264 | 633 | 157 | 531 | 8.88e-56 | 198 |
MsG0480020976.01.T01 | MTR_7g027190 | 31.202 | 391 | 236 | 6 | 263 | 633 | 295 | 672 | 2.40e-55 | 200 |
MsG0480020976.01.T01 | MTR_8g442410 | 29.974 | 387 | 249 | 6 | 263 | 636 | 150 | 527 | 3.53e-48 | 177 |
MsG0480020976.01.T01 | MTR_7g074650 | 31.436 | 369 | 233 | 8 | 271 | 635 | 441 | 793 | 3.67e-48 | 181 |
MsG0480020976.01.T01 | MTR_3g065980 | 30.711 | 394 | 233 | 10 | 261 | 633 | 165 | 539 | 3.26e-47 | 175 |
MsG0480020976.01.T01 | MTR_4g076140 | 27.378 | 431 | 244 | 8 | 265 | 633 | 45 | 468 | 3.28e-45 | 167 |
MsG0480020976.01.T01 | MTR_2g034260 | 30.179 | 391 | 241 | 12 | 263 | 633 | 205 | 583 | 4.11e-42 | 161 |
MsG0480020976.01.T01 | MTR_3g022830 | 27.990 | 418 | 240 | 8 | 269 | 633 | 26 | 435 | 1.84e-41 | 156 |
MsG0480020976.01.T01 | MTR_4g102790 | 25.455 | 385 | 265 | 8 | 264 | 635 | 288 | 663 | 4.16e-40 | 156 |
MsG0480020976.01.T01 | MTR_4g097080 | 28.042 | 378 | 256 | 8 | 268 | 635 | 133 | 504 | 4.31e-40 | 154 |
MsG0480020976.01.T01 | MTR_1g096030 | 30.273 | 403 | 236 | 13 | 260 | 633 | 72 | 458 | 5.23e-40 | 152 |
MsG0480020976.01.T01 | MTR_2g034250 | 28.941 | 387 | 252 | 8 | 263 | 633 | 205 | 584 | 1.77e-39 | 153 |
MsG0480020976.01.T01 | MTR_2g089100 | 28.395 | 405 | 243 | 10 | 268 | 636 | 52 | 445 | 1.79e-36 | 142 |
MsG0480020976.01.T01 | MTR_5g015490 | 27.979 | 386 | 252 | 9 | 268 | 635 | 114 | 491 | 2.65e-36 | 142 |
MsG0480020976.01.T01 | MTR_4g077760 | 27.807 | 374 | 248 | 9 | 269 | 633 | 194 | 554 | 1.08e-35 | 142 |
MsG0480020976.01.T01 | MTR_2g034280 | 26.753 | 385 | 260 | 9 | 263 | 633 | 198 | 574 | 1.28e-34 | 139 |
MsG0480020976.01.T01 | MTR_4g076020 | 28.533 | 375 | 229 | 10 | 271 | 636 | 87 | 431 | 1.32e-34 | 137 |
MsG0480020976.01.T01 | MTR_1g069725 | 27.857 | 420 | 263 | 15 | 227 | 634 | 72 | 463 | 4.32e-34 | 136 |
MsG0480020976.01.T01 | MTR_7g109580 | 27.273 | 385 | 251 | 10 | 263 | 633 | 184 | 553 | 1.01e-33 | 136 |
MsG0480020976.01.T01 | MTR_7g057230 | 29.655 | 290 | 190 | 6 | 350 | 633 | 375 | 656 | 2.04e-31 | 130 |
MsG0480020976.01.T01 | MTR_3g072710 | 28.193 | 415 | 238 | 18 | 254 | 634 | 112 | 500 | 2.19e-30 | 125 |
MsG0480020976.01.T01 | MTR_1g086970 | 24.566 | 403 | 268 | 11 | 252 | 633 | 90 | 477 | 8.18e-30 | 123 |
MsG0480020976.01.T01 | MTR_5g058860 | 27.123 | 424 | 259 | 16 | 242 | 634 | 93 | 497 | 2.22e-28 | 119 |
MsG0480020976.01.T01 | MTR_5g009080 | 30.645 | 248 | 153 | 5 | 236 | 476 | 30 | 265 | 6.51e-28 | 118 |
MsG0480020976.01.T01 | MTR_5g009080 | 30.000 | 150 | 104 | 1 | 484 | 633 | 329 | 477 | 1.05e-16 | 83.6 |
MsG0480020976.01.T01 | MTR_6g047750 | 26.385 | 379 | 252 | 10 | 269 | 633 | 296 | 661 | 8.94e-28 | 119 |
MsG0480020976.01.T01 | MTR_8g093070 | 27.229 | 415 | 267 | 16 | 236 | 636 | 105 | 498 | 6.78e-27 | 115 |
MsG0480020976.01.T01 | MTR_2g099110 | 26.923 | 390 | 252 | 11 | 268 | 635 | 74 | 452 | 1.86e-26 | 113 |
MsG0480020976.01.T01 | MTR_4g095500 | 25.180 | 417 | 259 | 11 | 268 | 636 | 59 | 470 | 1.37e-24 | 107 |
MsG0480020976.01.T01 | MTR_5g015950 | 23.923 | 418 | 265 | 12 | 268 | 636 | 35 | 448 | 2.63e-24 | 106 |
MsG0480020976.01.T01 | MTR_3g053270 | 23.923 | 418 | 265 | 12 | 268 | 636 | 35 | 448 | 2.63e-24 | 106 |
MsG0480020976.01.T01 | MTR_0092s0100 | 24.051 | 395 | 281 | 8 | 245 | 633 | 346 | 727 | 4.11e-19 | 92.0 |
MsG0480020976.01.T01 | MTR_0092s0100 | 24.051 | 395 | 281 | 8 | 245 | 633 | 349 | 730 | 4.17e-19 | 92.0 |
MsG0480020976.01.T01 | MTR_4g026485 | 26.633 | 199 | 138 | 3 | 245 | 441 | 248 | 440 | 5.07e-16 | 82.0 |
MsG0480020976.01.T01 | MTR_8g020840 | 22.951 | 427 | 271 | 17 | 245 | 633 | 141 | 547 | 1.04e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480020976.01.T01 | AT2G29060 | 45.853 | 639 | 305 | 16 | 23 | 635 | 33 | 656 | 7.51e-178 | 520 |
MsG0480020976.01.T01 | AT1G07530 | 55.973 | 452 | 190 | 6 | 192 | 636 | 318 | 767 | 1.85e-177 | 523 |
MsG0480020976.01.T01 | AT5G59450 | 44.498 | 627 | 273 | 15 | 21 | 636 | 38 | 600 | 3.13e-172 | 504 |
MsG0480020976.01.T01 | AT2G29065 | 45.705 | 617 | 283 | 15 | 52 | 636 | 34 | 630 | 1.94e-166 | 490 |
MsG0480020976.01.T01 | AT2G29060 | 52.298 | 457 | 207 | 8 | 187 | 635 | 240 | 693 | 3.58e-162 | 481 |
MsG0480020976.01.T01 | AT3G46600 | 52.980 | 453 | 189 | 5 | 189 | 636 | 116 | 549 | 7.37e-161 | 473 |
MsG0480020976.01.T01 | AT3G46600 | 52.980 | 453 | 189 | 5 | 189 | 636 | 148 | 581 | 9.57e-161 | 474 |
MsG0480020976.01.T01 | AT2G37650 | 51.844 | 461 | 205 | 6 | 189 | 635 | 245 | 702 | 1.68e-159 | 475 |
MsG0480020976.01.T01 | AT2G37650 | 51.844 | 461 | 205 | 6 | 189 | 635 | 257 | 714 | 1.92e-159 | 475 |
MsG0480020976.01.T01 | AT3G46600 | 58.221 | 371 | 152 | 2 | 268 | 636 | 4 | 373 | 9.34e-156 | 453 |
MsG0480020976.01.T01 | AT1G07520 | 51.648 | 455 | 195 | 10 | 192 | 636 | 92 | 531 | 3.30e-153 | 452 |
MsG0480020976.01.T01 | AT1G07520 | 51.648 | 455 | 195 | 10 | 192 | 636 | 92 | 531 | 3.30e-153 | 452 |
MsG0480020976.01.T01 | AT1G07520 | 51.648 | 455 | 195 | 10 | 192 | 636 | 257 | 696 | 1.00e-151 | 454 |
MsG0480020976.01.T01 | AT1G07520 | 51.648 | 455 | 195 | 10 | 192 | 636 | 256 | 695 | 1.07e-151 | 454 |
MsG0480020976.01.T01 | AT1G50600 | 34.234 | 444 | 269 | 9 | 197 | 633 | 98 | 525 | 1.33e-67 | 230 |
MsG0480020976.01.T01 | AT1G50600 | 34.234 | 444 | 269 | 9 | 197 | 633 | 173 | 600 | 6.19e-67 | 230 |
MsG0480020976.01.T01 | AT1G50600 | 34.234 | 444 | 269 | 9 | 197 | 633 | 169 | 596 | 7.52e-67 | 229 |
MsG0480020976.01.T01 | AT5G48150 | 33.155 | 374 | 244 | 4 | 264 | 633 | 118 | 489 | 1.09e-62 | 216 |
MsG0480020976.01.T01 | AT5G48150 | 33.155 | 374 | 244 | 4 | 264 | 633 | 118 | 489 | 1.09e-62 | 216 |
MsG0480020976.01.T01 | AT5G48150 | 33.155 | 374 | 244 | 4 | 264 | 633 | 118 | 489 | 1.09e-62 | 216 |
MsG0480020976.01.T01 | AT5G48150 | 33.155 | 374 | 244 | 4 | 264 | 633 | 118 | 489 | 1.09e-62 | 216 |
MsG0480020976.01.T01 | AT4G17230 | 33.158 | 380 | 249 | 4 | 259 | 635 | 149 | 526 | 2.75e-57 | 202 |
MsG0480020976.01.T01 | AT4G17230 | 33.158 | 380 | 249 | 4 | 259 | 635 | 149 | 526 | 2.75e-57 | 202 |
MsG0480020976.01.T01 | AT2G04890 | 31.903 | 373 | 242 | 5 | 264 | 633 | 49 | 412 | 4.69e-57 | 198 |
MsG0480020976.01.T01 | AT1G21450 | 31.806 | 371 | 245 | 6 | 268 | 633 | 225 | 592 | 5.87e-55 | 197 |
MsG0480020976.01.T01 | AT3G54220 | 32.979 | 376 | 221 | 12 | 271 | 635 | 296 | 651 | 2.63e-49 | 182 |
MsG0480020976.01.T01 | AT3G03450 | 31.620 | 389 | 230 | 12 | 261 | 633 | 176 | 544 | 9.64e-48 | 176 |
MsG0480020976.01.T01 | AT1G66350 | 30.561 | 481 | 268 | 17 | 182 | 633 | 62 | 505 | 3.05e-47 | 174 |
MsG0480020976.01.T01 | AT5G17490 | 30.233 | 387 | 232 | 11 | 261 | 633 | 153 | 515 | 1.80e-45 | 169 |
MsG0480020976.01.T01 | AT1G14920 | 31.217 | 378 | 237 | 9 | 263 | 633 | 167 | 528 | 1.90e-45 | 169 |
MsG0480020976.01.T01 | AT2G01570 | 31.771 | 384 | 227 | 12 | 263 | 633 | 219 | 580 | 3.56e-45 | 170 |
MsG0480020976.01.T01 | AT5G66770 | 31.608 | 367 | 239 | 9 | 272 | 633 | 224 | 583 | 9.17e-44 | 166 |
MsG0480020976.01.T01 | AT3G50650 | 30.618 | 356 | 232 | 7 | 286 | 633 | 193 | 541 | 4.44e-41 | 157 |
MsG0480020976.01.T01 | AT4G37650 | 27.708 | 397 | 248 | 11 | 267 | 635 | 145 | 530 | 8.40e-40 | 153 |
MsG0480020976.01.T01 | AT5G41920 | 27.083 | 384 | 251 | 9 | 260 | 633 | 35 | 399 | 3.13e-35 | 138 |
MsG0480020976.01.T01 | AT5G52510 | 27.632 | 380 | 247 | 10 | 271 | 633 | 271 | 639 | 5.81e-35 | 140 |
MsG0480020976.01.T01 | AT1G63100 | 27.336 | 428 | 278 | 12 | 229 | 634 | 238 | 654 | 6.74e-34 | 137 |
MsG0480020976.01.T01 | AT1G63100 | 27.336 | 428 | 278 | 12 | 229 | 634 | 213 | 629 | 6.76e-34 | 137 |
MsG0480020976.01.T01 | AT1G55580 | 26.923 | 390 | 214 | 11 | 297 | 633 | 73 | 444 | 5.43e-31 | 126 |
MsG0480020976.01.T01 | AT4G08250 | 30.194 | 361 | 226 | 14 | 287 | 633 | 128 | 476 | 5.92e-31 | 127 |
MsG0480020976.01.T01 | AT3G49950 | 27.990 | 393 | 245 | 10 | 268 | 635 | 30 | 409 | 9.44e-31 | 125 |
MsG0480020976.01.T01 | AT1G50420 | 30.088 | 226 | 143 | 4 | 265 | 481 | 54 | 273 | 1.16e-28 | 120 |
MsG0480020976.01.T01 | AT1G50420 | 30.667 | 150 | 103 | 1 | 484 | 633 | 330 | 478 | 9.25e-17 | 84.0 |
MsG0480020976.01.T01 | AT3G13840 | 25.822 | 426 | 257 | 20 | 235 | 633 | 116 | 509 | 6.93e-20 | 94.0 |
MsG0480020976.01.T01 | AT2G45160 | 22.025 | 395 | 250 | 13 | 269 | 633 | 272 | 638 | 2.95e-12 | 70.1 |
MsG0480020976.01.T01 | AT3G60630 | 28.502 | 207 | 113 | 6 | 336 | 520 | 327 | 520 | 3.53e-11 | 66.6 |
Find 127 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGATTCTGTTCCTTCTTC+TGG | 0.154876 | 4:+51412469 | MsG0480020976.01.T01:CDS |
TTCTGCTAGCTGTTTCTTGC+TGG | 0.218999 | 4:+51414255 | MsG0480020976.01.T01:CDS |
AATATTCAAACCCTATTCTT+AGG | 0.247868 | 4:+51412527 | MsG0480020976.01.T01:CDS |
TTCACTCTATCCACCAGTTC+TGG | 0.254183 | 4:-51414149 | None:intergenic |
TCGTCGCAATCACAGATTTC+TGG | 0.282921 | 4:+51413069 | MsG0480020976.01.T01:CDS |
GTATATTAGTGATATTCTTA+TGG | 0.285545 | 4:+51412549 | MsG0480020976.01.T01:CDS |
TCAAAGGATGTCGAATTTCT+TGG | 0.296573 | 4:+51413422 | MsG0480020976.01.T01:CDS |
TCTTATGGATGAAGAAGATT+TGG | 0.306482 | 4:+51412564 | MsG0480020976.01.T01:CDS |
TAAGTACTACGGTAGATTTA+TGG | 0.318992 | 4:+51413154 | MsG0480020976.01.T01:CDS |
ATCTTCCTCAGCCAGGATTT+AGG | 0.323032 | 4:+51413595 | MsG0480020976.01.T01:CDS |
CTCAGAAGATTCACCATTTG+AGG | 0.340982 | 4:-51412497 | None:intergenic |
CCACCAAGGCTTCGTATTAC+AGG | 0.346264 | 4:+51413567 | MsG0480020976.01.T01:CDS |
ACACCATGTATGAAAATGTT+TGG | 0.351597 | 4:-51413861 | None:intergenic |
ACAATTGCCTTGCTCAGAAA+TGG | 0.366886 | 4:+51413691 | MsG0480020976.01.T01:CDS |
TCACTAATATACCTAAGAAT+AGG | 0.370302 | 4:-51412538 | None:intergenic |
TCTGTTAACGGATGCATGTT+TGG | 0.374306 | 4:+51412364 | None:intergenic |
TCTGGTTCAGGAAGATCTAA+TGG | 0.377826 | 4:+51413087 | MsG0480020976.01.T01:CDS |
CTTACAAGCAGTGGCAGGTT+AGG | 0.393985 | 4:+51414090 | MsG0480020976.01.T01:CDS |
GGATGGGAAGTGGGTTCTGC+AGG | 0.394105 | 4:+51414217 | MsG0480020976.01.T01:CDS |
CAATCACAGATTTCTGGTTC+AGG | 0.395582 | 4:+51413075 | MsG0480020976.01.T01:CDS |
TATCAAACAATGATGAGAAA+TGG | 0.404180 | 4:-51413941 | None:intergenic |
TCTGCTAGCTGTTTCTTGCT+GGG | 0.404236 | 4:+51414256 | MsG0480020976.01.T01:CDS |
TGATGATGTTCTTCTTTGTA+AGG | 0.409875 | 4:+51413008 | MsG0480020976.01.T01:CDS |
ATGATTGAGAAAGGGTTATT+CGG | 0.411272 | 4:+51414008 | MsG0480020976.01.T01:CDS |
GTCTCTTCAACCCTTTCTGC+AGG | 0.412650 | 4:-51413618 | None:intergenic |
ACTTCCATTGGCTCCAGAAC+TGG | 0.415867 | 4:+51414136 | MsG0480020976.01.T01:CDS |
TTCATACATGGTGTAGTGAA+TGG | 0.416386 | 4:+51413870 | MsG0480020976.01.T01:CDS |
AAATTCGACATCCTTTGAAA+TGG | 0.417376 | 4:-51413417 | None:intergenic |
CACTAATATACCTAAGAATA+GGG | 0.422212 | 4:-51412537 | None:intergenic |
CTAGGATCAGGAACAGGAAC+TGG | 0.423613 | 4:+51412655 | MsG0480020976.01.T01:CDS |
ATGATATACTGAAGCAGATT+AGG | 0.428145 | 4:+51413232 | MsG0480020976.01.T01:CDS |
AGTGAAAGAAATGGTGAAGA+AGG | 0.428294 | 4:+51414166 | MsG0480020976.01.T01:CDS |
GTGAAGTACTGCAAGAGGTT+TGG | 0.428838 | 4:+51413654 | MsG0480020976.01.T01:CDS |
TGCCACTGCTTGTAAGTCTC+TGG | 0.433473 | 4:-51414083 | None:intergenic |
AGCCTCCACATTATTGACTT+TGG | 0.433913 | 4:+51413483 | MsG0480020976.01.T01:CDS |
TCATCAACTACAAAATCTTT+CGG | 0.438965 | 4:-51414194 | None:intergenic |
CATTGTTGATTGCGATTCAC+CGG | 0.441083 | 4:+51412732 | MsG0480020976.01.T01:CDS |
GGTTATCTGATGAATGATAA+TGG | 0.445118 | 4:+51412901 | MsG0480020976.01.T01:CDS |
TCTTCTGGAATAACCTCAAA+TGG | 0.456149 | 4:+51412484 | MsG0480020976.01.T01:CDS |
GCAAGGCAATTGTACTCAAA+TGG | 0.459316 | 4:-51413681 | None:intergenic |
TGATAAAATTCCTCATGATC+CGG | 0.461532 | 4:+51412777 | MsG0480020976.01.T01:CDS |
TCTATATAATTTGATTAAGC+AGG | 0.461754 | 4:-51414281 | None:intergenic |
TTTGAGGTTATTCCAGAAGA+AGG | 0.463666 | 4:-51412481 | None:intergenic |
AAACCTCGCTGATCACTAAC+CGG | 0.467660 | 4:-51412796 | None:intergenic |
TTAGCTCATTACTTTGCTGA+TGG | 0.473385 | 4:+51413291 | MsG0480020976.01.T01:CDS |
AGGATTTAGGCCTGCAGAAA+GGG | 0.473613 | 4:+51413608 | MsG0480020976.01.T01:CDS |
CTGATGAATGATAATGGTAT+TGG | 0.482313 | 4:+51412907 | MsG0480020976.01.T01:CDS |
TGGGTTCTGCAGGGTTGGAA+AGG | 0.485460 | 4:+51414227 | MsG0480020976.01.T01:CDS |
GGAAGTGGGTTCTGCAGGGT+TGG | 0.485717 | 4:+51414222 | MsG0480020976.01.T01:CDS |
CGCTGAAGTCCATCGCCACT+TGG | 0.487409 | 4:-51413267 | None:intergenic |
AAGACATCGCGATCGAAGAA+AGG | 0.489585 | 4:+51413111 | MsG0480020976.01.T01:CDS |
CAATTGCCTTGCTCAGAAAT+GGG | 0.493446 | 4:+51413692 | MsG0480020976.01.T01:CDS |
ATGCTGTGTTGAGGTTGATC+AGG | 0.494919 | 4:+51413829 | MsG0480020976.01.T01:CDS |
GGGTTCTGCAGGGTTGGAAA+GGG | 0.502336 | 4:+51414228 | MsG0480020976.01.T01:CDS |
CAGGATTTAGGCCTGCAGAA+AGG | 0.503621 | 4:+51413607 | MsG0480020976.01.T01:CDS |
ATCGAAGAAAGGTTCCAGTA+AGG | 0.504093 | 4:+51413122 | MsG0480020976.01.T01:CDS |
AAACAATCTTGCAACATACA+AGG | 0.512556 | 4:-51412595 | None:intergenic |
CTTTCTGCAGGCCTAAATCC+TGG | 0.515059 | 4:-51413606 | None:intergenic |
TATAGGCTGATGATTGAGAA+AGG | 0.518213 | 4:+51413999 | MsG0480020976.01.T01:CDS |
CCTGTAATACGAAGCCTTGG+TGG | 0.518595 | 4:-51413567 | None:intergenic |
GAAGAATGTTTCTGATGAAA+CGG | 0.519403 | 4:+51413785 | MsG0480020976.01.T01:CDS |
CATTCTTCGCCAAGTGGCGA+TGG | 0.522850 | 4:+51413258 | MsG0480020976.01.T01:CDS |
TGAGAAAGGGTTATTCGGAA+GGG | 0.524037 | 4:+51414013 | MsG0480020976.01.T01:CDS |
GATGTTCTAGGATCAGGAAC+AGG | 0.527601 | 4:+51412649 | MsG0480020976.01.T01:CDS |
TTACAGCTTCTCCATTTCAA+AGG | 0.527701 | 4:+51413406 | MsG0480020976.01.T01:CDS |
GGAATTGATCTTCCTCAGCC+AGG | 0.529102 | 4:+51413588 | MsG0480020976.01.T01:CDS |
CAACAGAACTATTCTGAAGC+TGG | 0.530899 | 4:+51413446 | MsG0480020976.01.T01:CDS |
TTCATCTTCCAAACATCACT+CGG | 0.531296 | 4:-51412829 | None:intergenic |
AAGGTTCAAACAACTTCCAT+TGG | 0.531648 | 4:+51414124 | MsG0480020976.01.T01:CDS |
AAGGAGCAGAGAGGGTTGAA+AGG | 0.532815 | 4:+51414060 | MsG0480020976.01.T01:CDS |
TCGAAGAAAGGTTCCAGTAA+GGG | 0.534571 | 4:+51413123 | MsG0480020976.01.T01:CDS |
GAAGGAACAGAATCACTTGA+AGG | 0.539537 | 4:-51412463 | None:intergenic |
TCCACCAGTTCTGGAGCCAA+TGG | 0.540258 | 4:-51414140 | None:intergenic |
AGCTTGTGAAGGAGCAGAGA+GGG | 0.541628 | 4:+51414052 | MsG0480020976.01.T01:CDS |
CAGCGTCTTTCAGAGAGATC+CGG | 0.542215 | 4:+51413540 | MsG0480020976.01.T01:CDS |
GCAGAAAGGGTTGAAGAGAC+AGG | 0.545150 | 4:+51413621 | MsG0480020976.01.T01:CDS |
GATGGGAAGTGGGTTCTGCA+GGG | 0.547301 | 4:+51414218 | MsG0480020976.01.T01:CDS |
TTGAGAAAGGGTTATTCGGA+AGG | 0.547490 | 4:+51414012 | MsG0480020976.01.T01:CDS |
CAGCTTCAGAATAGTTCTGT+TGG | 0.547739 | 4:-51413445 | None:intergenic |
GATGTTCTTCTTTGTAAGGA+TGG | 0.548183 | 4:+51413012 | MsG0480020976.01.T01:CDS |
AGAGGATTAGGGGAGAAGAG+AGG | 0.548379 | 4:+51412880 | MsG0480020976.01.T01:CDS |
CTTGAGGCGCGATTATCTGC+TGG | 0.549108 | 4:+51413315 | MsG0480020976.01.T01:CDS |
TTACTTTGCTGATGGACTTG+AGG | 0.550105 | 4:+51413299 | MsG0480020976.01.T01:CDS |
GGCCAGAGACTTACAAGCAG+TGG | 0.550744 | 4:+51414081 | MsG0480020976.01.T01:CDS |
ACGAAGCCTTGGTGGCCCAC+CGG | 0.554118 | 4:-51413559 | None:intergenic |
AGTTGATGAGGATGGGAAGT+GGG | 0.558093 | 4:+51414208 | MsG0480020976.01.T01:CDS |
CGAAGAAAGGTTCCAGTAAG+GGG | 0.564272 | 4:+51413124 | MsG0480020976.01.T01:CDS |
TAGTTGATGAGGATGGGAAG+TGG | 0.564567 | 4:+51414207 | MsG0480020976.01.T01:CDS |
CGGATCTCTCTGAAAGACGC+TGG | 0.565013 | 4:-51413539 | None:intergenic |
TAGTGTCCCATTTCTGAGCA+AGG | 0.568684 | 4:-51413698 | None:intergenic |
TGATAGAGAAGAAGTAACAG+TGG | 0.569114 | 4:+51413743 | MsG0480020976.01.T01:CDS |
TTTGGGTTCTAGAGGATTAG+GGG | 0.570677 | 4:+51412870 | MsG0480020976.01.T01:CDS |
CGGTGAATCGCAATCAACAA+TGG | 0.570746 | 4:-51412731 | None:intergenic |
AGAGACTTACAAGCAGTGGC+AGG | 0.571929 | 4:+51414085 | MsG0480020976.01.T01:CDS |
CTGCAGCAGACGACGACTGA+AGG | 0.573929 | 4:-51413356 | None:intergenic |
ATTCCTGTAATACGAAGCCT+TGG | 0.575936 | 4:-51413570 | None:intergenic |
CGTCTTTCAGAGAGATCCGG+TGG | 0.576548 | 4:+51413543 | MsG0480020976.01.T01:CDS |
AACCTCAACACAGCATCTCT+AGG | 0.577064 | 4:-51413822 | None:intergenic |
ATAGGCTGATGATTGAGAAA+GGG | 0.583749 | 4:+51414000 | MsG0480020976.01.T01:CDS |
TCTCAATGTGCACAAGCTGT+TGG | 0.587807 | 4:+51413186 | MsG0480020976.01.T01:CDS |
AGGTTAGGAACAAGAGAGCA+AGG | 0.590161 | 4:+51414105 | MsG0480020976.01.T01:CDS |
TCCATTGGCTCCAGAACTGG+TGG | 0.592807 | 4:+51414139 | MsG0480020976.01.T01:CDS |
GACTTGTGAAGTACTGCAAG+AGG | 0.596425 | 4:+51413649 | MsG0480020976.01.T01:CDS |
AGAGATCCGGTGGGCCACCA+AGG | 0.598231 | 4:+51413553 | MsG0480020976.01.T01:CDS |
CTGTTGGTAGCTATGATCAA+AGG | 0.603395 | 4:+51413202 | MsG0480020976.01.T01:CDS |
GTTTGGAAGATGAATGAAGA+GGG | 0.603900 | 4:+51412838 | MsG0480020976.01.T01:CDS |
CGCGTGAAGATGATCAATAT+AGG | 0.605875 | 4:+51413982 | MsG0480020976.01.T01:CDS |
GCAGGCCTAAATCCTGGCTG+AGG | 0.614834 | 4:-51413600 | None:intergenic |
CTGTGTTGAGGTTGATCAGG+AGG | 0.616107 | 4:+51413832 | MsG0480020976.01.T01:CDS |
GGTGGATAGAGTGAAAGAAA+TGG | 0.616135 | 4:+51414157 | MsG0480020976.01.T01:CDS |
AAATACCAAAGTCAATAATG+TGG | 0.616394 | 4:-51413488 | None:intergenic |
GTCCTAGAGATGCTGTGTTG+AGG | 0.620188 | 4:+51413820 | MsG0480020976.01.T01:CDS |
ATGGGACACTATAAGACTTG+AGG | 0.623248 | 4:+51413710 | MsG0480020976.01.T01:CDS |
TACCAAAGTCAATAATGTGG+AGG | 0.623436 | 4:-51413485 | None:intergenic |
TGATCACTAACCGGATCATG+AGG | 0.627611 | 4:-51412787 | None:intergenic |
GAAAGACGCTGGATGAGACA+AGG | 0.629384 | 4:-51413528 | None:intergenic |
AGGCAGCATTCTTCGCCAAG+TGG | 0.643469 | 4:+51413252 | MsG0480020976.01.T01:CDS |
AGAAGATCTGAGAAGTAACA+AGG | 0.644638 | 4:+51412942 | MsG0480020976.01.T01:CDS |
AAAGGGTTGAAGAGACAGGT+CGG | 0.646693 | 4:+51413625 | MsG0480020976.01.T01:CDS |
TGTTTCTGATGAAACGGTGA+CGG | 0.654600 | 4:+51413791 | MsG0480020976.01.T01:CDS |
GTCTTTCAGAGAGATCCGGT+GGG | 0.679118 | 4:+51413544 | MsG0480020976.01.T01:CDS |
CTATATTGATCATCTTCACG+CGG | 0.683616 | 4:-51413981 | None:intergenic |
GTAAATGTGATAGCTTGTGA+AGG | 0.707067 | 4:+51414041 | MsG0480020976.01.T01:CDS |
TAGCTTGTGAAGGAGCAGAG+AGG | 0.713278 | 4:+51414051 | MsG0480020976.01.T01:CDS |
TGTTTGGAAGATGAATGAAG+AGG | 0.716887 | 4:+51412837 | MsG0480020976.01.T01:CDS |
GACTGAAGGAGTTTATACAT+CGG | 0.748275 | 4:-51413342 | None:intergenic |
GATCCGGTTAGTGATCAGCG+AGG | 0.772971 | 4:+51412793 | MsG0480020976.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATTATCACAAAAAATTGA+CGG | - | Chr4:51413045-51413064 | None:intergenic | 20.0% |
!! | GTATATTAGTGATATTCTTA+TGG | + | Chr4:51412549-51412568 | MsG0480020976.01.T01:CDS | 20.0% |
! | AAATACCAAAGTCAATAATG+TGG | - | Chr4:51413491-51413510 | None:intergenic | 25.0% |
! | AATATTCAAACCCTATTCTT+AGG | + | Chr4:51412527-51412546 | MsG0480020976.01.T01:CDS | 25.0% |
! | CACTAATATACCTAAGAATA+GGG | - | Chr4:51412540-51412559 | None:intergenic | 25.0% |
! | TATCAAACAATGATGAGAAA+TGG | - | Chr4:51413944-51413963 | None:intergenic | 25.0% |
! | TCACTAATATACCTAAGAAT+AGG | - | Chr4:51412541-51412560 | None:intergenic | 25.0% |
! | TCATCAACTACAAAATCTTT+CGG | - | Chr4:51414197-51414216 | None:intergenic | 25.0% |
!! | AAATCGTTTTATGATGTTCT+AGG | + | Chr4:51412637-51412656 | MsG0480020976.01.T01:CDS | 25.0% |
!! | AATCCAAACATTTTCATACA+TGG | + | Chr4:51413858-51413877 | MsG0480020976.01.T01:CDS | 25.0% |
!!! | ATTGACTTTGGTATTTTCTA+TGG | + | Chr4:51413495-51413514 | MsG0480020976.01.T01:CDS | 25.0% |
AAACAATCTTGCAACATACA+AGG | - | Chr4:51412598-51412617 | None:intergenic | 30.0% | |
ACACCATGTATGAAAATGTT+TGG | - | Chr4:51413864-51413883 | None:intergenic | 30.0% | |
ATGATATACTGAAGCAGATT+AGG | + | Chr4:51413232-51413251 | MsG0480020976.01.T01:CDS | 30.0% | |
ATGATTGAGAAAGGGTTATT+CGG | + | Chr4:51414008-51414027 | MsG0480020976.01.T01:CDS | 30.0% | |
CTGAACCTAGTAAGAAAAAA+TGG | - | Chr4:51413909-51413928 | None:intergenic | 30.0% | |
GGTTATCTGATGAATGATAA+TGG | + | Chr4:51412901-51412920 | MsG0480020976.01.T01:CDS | 30.0% | |
TAAGTACTACGGTAGATTTA+TGG | + | Chr4:51413154-51413173 | MsG0480020976.01.T01:CDS | 30.0% | |
TCTTATGGATGAAGAAGATT+TGG | + | Chr4:51412564-51412583 | MsG0480020976.01.T01:CDS | 30.0% | |
TGATAAAATTCCTCATGATC+CGG | + | Chr4:51412777-51412796 | MsG0480020976.01.T01:CDS | 30.0% | |
! | AAATTCGACATCCTTTGAAA+TGG | - | Chr4:51413420-51413439 | None:intergenic | 30.0% |
! | ATCTCGTATGCATTATTTTC+CGG | - | Chr4:51412754-51412773 | None:intergenic | 30.0% |
! | GAAGAATGTTTCTGATGAAA+CGG | + | Chr4:51413785-51413804 | MsG0480020976.01.T01:CDS | 30.0% |
! | TGATGATGTTCTTCTTTGTA+AGG | + | Chr4:51413008-51413027 | MsG0480020976.01.T01:CDS | 30.0% |
! | TTGGTTTGAAAAAACAGACA+CGG | - | Chr4:51412398-51412417 | None:intergenic | 30.0% |
!! | CTGATGAATGATAATGGTAT+TGG | + | Chr4:51412907-51412926 | MsG0480020976.01.T01:CDS | 30.0% |
!! | GAAAGATTTTGTAGTTGATG+AGG | + | Chr4:51414196-51414215 | MsG0480020976.01.T01:CDS | 30.0% |
!!! | ATTTTGTAGTTGATGAGGAT+GGG | + | Chr4:51414201-51414220 | MsG0480020976.01.T01:CDS | 30.0% |
!!! | TTTTATGATGTTCTAGGATC+AGG | + | Chr4:51412643-51412662 | MsG0480020976.01.T01:CDS | 30.0% |
AAGGTTCAAACAACTTCCAT+TGG | + | Chr4:51414124-51414143 | MsG0480020976.01.T01:CDS | 35.0% | |
AGAAGATCTGAGAAGTAACA+AGG | + | Chr4:51412942-51412961 | MsG0480020976.01.T01:CDS | 35.0% | |
AGTGAAAGAAATGGTGAAGA+AGG | + | Chr4:51414166-51414185 | MsG0480020976.01.T01:CDS | 35.0% | |
ATAGGCTGATGATTGAGAAA+GGG | + | Chr4:51414000-51414019 | MsG0480020976.01.T01:CDS | 35.0% | |
CTATATTGATCATCTTCACG+CGG | - | Chr4:51413984-51414003 | None:intergenic | 35.0% | |
GACTGAAGGAGTTTATACAT+CGG | - | Chr4:51413345-51413364 | None:intergenic | 35.0% | |
GATGTTCTTCTTTGTAAGGA+TGG | + | Chr4:51413012-51413031 | MsG0480020976.01.T01:CDS | 35.0% | |
GGGGAAAAAACTAAGTACTA+CGG | + | Chr4:51413143-51413162 | MsG0480020976.01.T01:CDS | 35.0% | |
GTTTGGAAGATGAATGAAGA+GGG | + | Chr4:51412838-51412857 | MsG0480020976.01.T01:CDS | 35.0% | |
TACCAAAGTCAATAATGTGG+AGG | - | Chr4:51413488-51413507 | None:intergenic | 35.0% | |
TATAGGCTGATGATTGAGAA+AGG | + | Chr4:51413999-51414018 | MsG0480020976.01.T01:CDS | 35.0% | |
TCAAAGGATGTCGAATTTCT+TGG | + | Chr4:51413422-51413441 | MsG0480020976.01.T01:CDS | 35.0% | |
TGATAGAGAAGAAGTAACAG+TGG | + | Chr4:51413743-51413762 | MsG0480020976.01.T01:CDS | 35.0% | |
TGGTTTGAAAAAACAGACAC+GGG | - | Chr4:51412397-51412416 | None:intergenic | 35.0% | |
TGTTTGGAAGATGAATGAAG+AGG | + | Chr4:51412837-51412856 | MsG0480020976.01.T01:CDS | 35.0% | |
TTACAGCTTCTCCATTTCAA+AGG | + | Chr4:51413406-51413425 | MsG0480020976.01.T01:CDS | 35.0% | |
TTAGCTCATTACTTTGCTGA+TGG | + | Chr4:51413291-51413310 | MsG0480020976.01.T01:CDS | 35.0% | |
TTCATACATGGTGTAGTGAA+TGG | + | Chr4:51413870-51413889 | MsG0480020976.01.T01:CDS | 35.0% | |
TTCATCTTCCAAACATCACT+CGG | - | Chr4:51412832-51412851 | None:intergenic | 35.0% | |
! | CGAATTTAAACGCGTTTTCT+GGG | - | Chr4:51412423-51412442 | None:intergenic | 35.0% |
! | GTAAATGTGATAGCTTGTGA+AGG | + | Chr4:51414041-51414060 | MsG0480020976.01.T01:CDS | 35.0% |
! | GTATTTTCTATGGCTTTCAG+TGG | + | Chr4:51413505-51413524 | MsG0480020976.01.T01:CDS | 35.0% |
! | TCGAATTTAAACGCGTTTTC+TGG | - | Chr4:51412424-51412443 | None:intergenic | 35.0% |
! | TTTGAGGTTATTCCAGAAGA+AGG | - | Chr4:51412484-51412503 | None:intergenic | 35.0% |
!! | TCTTCTGGAATAACCTCAAA+TGG | + | Chr4:51412484-51412503 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | ACGCACCATTTTTTCTTACT+AGG | + | Chr4:51413901-51413920 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | ACTTAGTTTTTTCCCCTTAC+TGG | - | Chr4:51413139-51413158 | None:intergenic | 35.0% |
!!! | AGTTTTGTTTTGGGTTCTAG+AGG | + | Chr4:51412862-51412881 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | GAAGAGGGTAGTTTTGTTTT+GGG | + | Chr4:51412853-51412872 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | GATTTTGTAGTTGATGAGGA+TGG | + | Chr4:51414200-51414219 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | TGAAGAGGGTAGTTTTGTTT+TGG | + | Chr4:51412852-51412871 | MsG0480020976.01.T01:CDS | 35.0% |
!!! | TTTTGGGTTCTAGAGGATTA+GGG | + | Chr4:51412869-51412888 | MsG0480020976.01.T01:CDS | 35.0% |
ACAATTGCCTTGCTCAGAAA+TGG | + | Chr4:51413691-51413710 | MsG0480020976.01.T01:CDS | 40.0% | |
AGTGATTCTGTTCCTTCTTC+TGG | + | Chr4:51412469-51412488 | MsG0480020976.01.T01:CDS | 40.0% | |
ATCGAAGAAAGGTTCCAGTA+AGG | + | Chr4:51413122-51413141 | MsG0480020976.01.T01:CDS | 40.0% | |
ATGGGACACTATAAGACTTG+AGG | + | Chr4:51413710-51413729 | MsG0480020976.01.T01:CDS | 40.0% | |
ATTCCTGTAATACGAAGCCT+TGG | - | Chr4:51413573-51413592 | None:intergenic | 40.0% | |
CAATTGCCTTGCTCAGAAAT+GGG | + | Chr4:51413692-51413711 | MsG0480020976.01.T01:CDS | 40.0% | |
CGCGTGAAGATGATCAATAT+AGG | + | Chr4:51413982-51414001 | MsG0480020976.01.T01:CDS | 40.0% | |
CTCAGAAGATTCACCATTTG+AGG | - | Chr4:51412500-51412519 | None:intergenic | 40.0% | |
GAAGGAACAGAATCACTTGA+AGG | - | Chr4:51412466-51412485 | None:intergenic | 40.0% | |
GCAAGGCAATTGTACTCAAA+TGG | - | Chr4:51413684-51413703 | None:intergenic | 40.0% | |
GGTGGATAGAGTGAAAGAAA+TGG | + | Chr4:51414157-51414176 | MsG0480020976.01.T01:CDS | 40.0% | |
TCGAAGAAAGGTTCCAGTAA+GGG | + | Chr4:51413123-51413142 | MsG0480020976.01.T01:CDS | 40.0% | |
TGAGAAAGGGTTATTCGGAA+GGG | + | Chr4:51414013-51414032 | MsG0480020976.01.T01:CDS | 40.0% | |
TTGAGAAAGGGTTATTCGGA+AGG | + | Chr4:51414012-51414031 | MsG0480020976.01.T01:CDS | 40.0% | |
! | CAGCTTCAGAATAGTTCTGT+TGG | - | Chr4:51413448-51413467 | None:intergenic | 40.0% |
! | CATTGTTGATTGCGATTCAC+CGG | + | Chr4:51412732-51412751 | MsG0480020976.01.T01:CDS | 40.0% |
! | TAAACGCGTTTTCTGGGTTT+TGG | - | Chr4:51412417-51412436 | None:intergenic | 40.0% |
! | TCTGGTTCAGGAAGATCTAA+TGG | + | Chr4:51413087-51413106 | MsG0480020976.01.T01:CDS | 40.0% |
! | TGTTTCTGATGAAACGGTGA+CGG | + | Chr4:51413791-51413810 | MsG0480020976.01.T01:CDS | 40.0% |
!! | AGCCTCCACATTATTGACTT+TGG | + | Chr4:51413483-51413502 | MsG0480020976.01.T01:CDS | 40.0% |
!! | CAACAGAACTATTCTGAAGC+TGG | + | Chr4:51413446-51413465 | MsG0480020976.01.T01:CDS | 40.0% |
!! | CAATCACAGATTTCTGGTTC+AGG | + | Chr4:51413075-51413094 | MsG0480020976.01.T01:CDS | 40.0% |
!! | CTGTTGGTAGCTATGATCAA+AGG | + | Chr4:51413202-51413221 | MsG0480020976.01.T01:CDS | 40.0% |
!! | TTACTTTGCTGATGGACTTG+AGG | + | Chr4:51413299-51413318 | MsG0480020976.01.T01:CDS | 40.0% |
!! | TTTGGGTTCTAGAGGATTAG+GGG | + | Chr4:51412870-51412889 | MsG0480020976.01.T01:CDS | 40.0% |
!!! | AGTGATCAGCGAGGTTTTTT+CGG | + | Chr4:51412802-51412821 | MsG0480020976.01.T01:CDS | 40.0% |
!!! | GTTTTGGGTTCTAGAGGATT+AGG | + | Chr4:51412868-51412887 | MsG0480020976.01.T01:CDS | 40.0% |
AAACCTCGCTGATCACTAAC+CGG | - | Chr4:51412799-51412818 | None:intergenic | 45.0% | |
AAAGGGTTGAAGAGACAGGT+CGG | + | Chr4:51413625-51413644 | MsG0480020976.01.T01:CDS | 45.0% | |
AACCTCAACACAGCATCTCT+AGG | - | Chr4:51413825-51413844 | None:intergenic | 45.0% | |
AAGACATCGCGATCGAAGAA+AGG | + | Chr4:51413111-51413130 | MsG0480020976.01.T01:CDS | 45.0% | |
AGGATTTAGGCCTGCAGAAA+GGG | + | Chr4:51413608-51413627 | MsG0480020976.01.T01:CDS | 45.0% | |
AGGTTAGGAACAAGAGAGCA+AGG | + | Chr4:51414105-51414124 | MsG0480020976.01.T01:CDS | 45.0% | |
ATCTTCCTCAGCCAGGATTT+AGG | + | Chr4:51413595-51413614 | MsG0480020976.01.T01:CDS | 45.0% | |
CGAAGAAAGGTTCCAGTAAG+GGG | + | Chr4:51413124-51413143 | MsG0480020976.01.T01:CDS | 45.0% | |
CGGTGAATCGCAATCAACAA+TGG | - | Chr4:51412734-51412753 | None:intergenic | 45.0% | |
TAGTGTCCCATTTCTGAGCA+AGG | - | Chr4:51413701-51413720 | None:intergenic | 45.0% | |
TCGTCGCAATCACAGATTTC+TGG | + | Chr4:51413069-51413088 | MsG0480020976.01.T01:CDS | 45.0% | |
TCTCAATGTGCACAAGCTGT+TGG | + | Chr4:51413186-51413205 | MsG0480020976.01.T01:CDS | 45.0% | |
TGATCACTAACCGGATCATG+AGG | - | Chr4:51412790-51412809 | None:intergenic | 45.0% | |
TTCACTCTATCCACCAGTTC+TGG | - | Chr4:51414152-51414171 | None:intergenic | 45.0% | |
! | ATGCTGTGTTGAGGTTGATC+AGG | + | Chr4:51413829-51413848 | MsG0480020976.01.T01:CDS | 45.0% |
! | TCGGTTTTCCGAGTGATGTT+TGG | + | Chr4:51412821-51412840 | MsG0480020976.01.T01:CDS | 45.0% |
!! | AGTTGATGAGGATGGGAAGT+GGG | + | Chr4:51414208-51414227 | MsG0480020976.01.T01:CDS | 45.0% |
!! | GACTTGTGAAGTACTGCAAG+AGG | + | Chr4:51413649-51413668 | MsG0480020976.01.T01:CDS | 45.0% |
!! | GATGTTCTAGGATCAGGAAC+AGG | + | Chr4:51412649-51412668 | MsG0480020976.01.T01:CDS | 45.0% |
!! | GTGAAGTACTGCAAGAGGTT+TGG | + | Chr4:51413654-51413673 | MsG0480020976.01.T01:CDS | 45.0% |
!! | TAGTTGATGAGGATGGGAAG+TGG | + | Chr4:51414207-51414226 | MsG0480020976.01.T01:CDS | 45.0% |
!! | TCTGCTAGCTGTTTCTTGCT+GGG | + | Chr4:51414256-51414275 | MsG0480020976.01.T01:CDS | 45.0% |
!! | TTCTGCTAGCTGTTTCTTGC+TGG | + | Chr4:51414255-51414274 | MsG0480020976.01.T01:CDS | 45.0% |
AAGGAGCAGAGAGGGTTGAA+AGG | + | Chr4:51414060-51414079 | MsG0480020976.01.T01:CDS | 50.0% | |
AGAGACTTACAAGCAGTGGC+AGG | + | Chr4:51414085-51414104 | MsG0480020976.01.T01:CDS | 50.0% | |
AGAGGATTAGGGGAGAAGAG+AGG | + | Chr4:51412880-51412899 | MsG0480020976.01.T01:CDS | 50.0% | |
AGCTTGTGAAGGAGCAGAGA+GGG | + | Chr4:51414052-51414071 | MsG0480020976.01.T01:CDS | 50.0% | |
CAGCGTCTTTCAGAGAGATC+CGG | + | Chr4:51413540-51413559 | MsG0480020976.01.T01:CDS | 50.0% | |
CAGGATTTAGGCCTGCAGAA+AGG | + | Chr4:51413607-51413626 | MsG0480020976.01.T01:CDS | 50.0% | |
CCACCAAGGCTTCGTATTAC+AGG | + | Chr4:51413567-51413586 | MsG0480020976.01.T01:CDS | 50.0% | |
CCTGTAATACGAAGCCTTGG+TGG | - | Chr4:51413570-51413589 | None:intergenic | 50.0% | |
CTAGGATCAGGAACAGGAAC+TGG | + | Chr4:51412655-51412674 | MsG0480020976.01.T01:CDS | 50.0% | |
CTTACAAGCAGTGGCAGGTT+AGG | + | Chr4:51414090-51414109 | MsG0480020976.01.T01:CDS | 50.0% | |
CTTTCTGCAGGCCTAAATCC+TGG | - | Chr4:51413609-51413628 | None:intergenic | 50.0% | |
GAAAGACGCTGGATGAGACA+AGG | - | Chr4:51413531-51413550 | None:intergenic | 50.0% | |
GCAGAAAGGGTTGAAGAGAC+AGG | + | Chr4:51413621-51413640 | MsG0480020976.01.T01:CDS | 50.0% | |
GGAATTGATCTTCCTCAGCC+AGG | + | Chr4:51413588-51413607 | MsG0480020976.01.T01:CDS | 50.0% | |
GTCCTAGAGATGCTGTGTTG+AGG | + | Chr4:51413820-51413839 | MsG0480020976.01.T01:CDS | 50.0% | |
GTCTCTTCAACCCTTTCTGC+AGG | - | Chr4:51413621-51413640 | None:intergenic | 50.0% | |
GTCTTTCAGAGAGATCCGGT+GGG | + | Chr4:51413544-51413563 | MsG0480020976.01.T01:CDS | 50.0% | |
TGCCACTGCTTGTAAGTCTC+TGG | - | Chr4:51414086-51414105 | None:intergenic | 50.0% | |
! | CTGTGTTGAGGTTGATCAGG+AGG | + | Chr4:51413832-51413851 | MsG0480020976.01.T01:CDS | 50.0% |
! | TAGCTTGTGAAGGAGCAGAG+AGG | + | Chr4:51414051-51414070 | MsG0480020976.01.T01:CDS | 50.0% |
!! | ACTTCCATTGGCTCCAGAAC+TGG | + | Chr4:51414136-51414155 | MsG0480020976.01.T01:CDS | 50.0% |
AGGCAGCATTCTTCGCCAAG+TGG | + | Chr4:51413252-51413271 | MsG0480020976.01.T01:CDS | 55.0% | |
CATTCTTCGCCAAGTGGCGA+TGG | + | Chr4:51413258-51413277 | MsG0480020976.01.T01:CDS | 55.0% | |
CGTCTTTCAGAGAGATCCGG+TGG | + | Chr4:51413543-51413562 | MsG0480020976.01.T01:CDS | 55.0% | |
CTTGAGGCGCGATTATCTGC+TGG | + | Chr4:51413315-51413334 | MsG0480020976.01.T01:CDS | 55.0% | |
GATCCGGTTAGTGATCAGCG+AGG | + | Chr4:51412793-51412812 | MsG0480020976.01.T01:CDS | 55.0% | |
GGCCAGAGACTTACAAGCAG+TGG | + | Chr4:51414081-51414100 | MsG0480020976.01.T01:CDS | 55.0% | |
GGGTTCTGCAGGGTTGGAAA+GGG | + | Chr4:51414228-51414247 | MsG0480020976.01.T01:CDS | 55.0% | |
TGGGTTCTGCAGGGTTGGAA+AGG | + | Chr4:51414227-51414246 | MsG0480020976.01.T01:CDS | 55.0% | |
! | CGGATCTCTCTGAAAGACGC+TGG | - | Chr4:51413542-51413561 | None:intergenic | 55.0% |
! | GATGGGAAGTGGGTTCTGCA+GGG | + | Chr4:51414218-51414237 | MsG0480020976.01.T01:CDS | 55.0% |
!! | TCCACCAGTTCTGGAGCCAA+TGG | - | Chr4:51414143-51414162 | None:intergenic | 55.0% |
!! | TCCATTGGCTCCAGAACTGG+TGG | + | Chr4:51414139-51414158 | MsG0480020976.01.T01:CDS | 55.0% |
CGCTGAAGTCCATCGCCACT+TGG | - | Chr4:51413270-51413289 | None:intergenic | 60.0% | |
CTGCAGCAGACGACGACTGA+AGG | - | Chr4:51413359-51413378 | None:intergenic | 60.0% | |
GCAGGCCTAAATCCTGGCTG+AGG | - | Chr4:51413603-51413622 | None:intergenic | 60.0% | |
! | GGAAGTGGGTTCTGCAGGGT+TGG | + | Chr4:51414222-51414241 | MsG0480020976.01.T01:CDS | 60.0% |
! | GGATGGGAAGTGGGTTCTGC+AGG | + | Chr4:51414217-51414236 | MsG0480020976.01.T01:CDS | 60.0% |
AGAGATCCGGTGGGCCACCA+AGG | + | Chr4:51413553-51413572 | MsG0480020976.01.T01:CDS | 65.0% | |
! | ACGAAGCCTTGGTGGCCCAC+CGG | - | Chr4:51413562-51413581 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 51412379 | 51414289 | 51412379 | ID=MsG0480020976.01;Name=MsG0480020976.01 |
Chr4 | mRNA | 51412379 | 51414289 | 51412379 | ID=MsG0480020976.01.T01;Parent=MsG0480020976.01;Name=MsG0480020976.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|636 |
Chr4 | exon | 51412379 | 51414289 | 51412379 | ID=MsG0480020976.01.T01:exon:1111;Parent=MsG0480020976.01.T01 |
Chr4 | CDS | 51412379 | 51414289 | 51412379 | ID=MsG0480020976.01.T01:cds;Parent=MsG0480020976.01.T01 |
Gene Sequence |
Protein sequence |