AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021019.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021019.01.T01 MTR_4g064150 94.694 735 39 0 1 735 1 735 0.0 1410
MsG0480021019.01.T01 MTR_4g064120 71.837 664 137 7 73 735 14 628 0.0 929
MsG0480021019.01.T01 MTR_4g064180 71.536 664 139 8 73 735 14 628 0.0 916
MsG0480021019.01.T01 MTR_2g097410 56.306 785 251 20 1 735 1 743 0.0 811
MsG0480021019.01.T01 MTR_4g064160 49.135 694 279 14 83 735 26 686 0.0 611
MsG0480021019.01.T01 MTR_7g062120 45.152 691 329 17 83 735 64 742 0.0 546
MsG0480021019.01.T01 MTR_2g097467 44.895 666 297 18 86 735 45 656 6.84e-177 521
MsG0480021019.01.T01 MTR_4g064200 52.446 511 219 9 239 735 152 652 3.70e-174 514
MsG0480021019.01.T01 MTR_2g097473 44.745 666 298 17 86 735 45 656 1.34e-173 513
MsG0480021019.01.T01 MTR_2g097463 43.779 651 306 15 96 735 56 657 2.08e-168 499
MsG0480021019.01.T01 MTR_2g097310 48.326 478 230 7 260 735 178 640 1.04e-157 471
MsG0480021019.01.T01 MTR_2g097350 40.396 656 315 16 92 735 51 642 8.17e-152 456
MsG0480021019.01.T01 MTR_2g097390 47.817 458 220 8 283 735 200 643 1.07e-148 448
MsG0480021019.01.T01 MTR_2g097380 45.295 457 189 8 283 735 164 563 5.14e-131 400
MsG0480021019.01.T01 MTR_2g082090 32.979 376 247 4 357 732 208 578 6.75e-68 234
MsG0480021019.01.T01 MTR_5g097480 32.181 376 250 3 357 732 173 543 2.44e-63 221
MsG0480021019.01.T01 MTR_3g056110 32.804 378 245 6 357 732 171 541 7.95e-61 214
MsG0480021019.01.T01 MTR_2g026250 29.894 378 259 4 356 732 223 595 4.06e-59 211
MsG0480021019.01.T01 MTR_4g133660 30.829 386 247 8 356 733 170 543 2.69e-57 204
MsG0480021019.01.T01 MTR_5g094450 31.865 386 242 9 357 732 157 531 9.98e-57 202
MsG0480021019.01.T01 MTR_8g442410 30.500 400 242 7 353 735 147 527 4.80e-54 195
MsG0480021019.01.T01 MTR_1g029420 28.877 374 261 3 359 732 223 591 1.30e-53 195
MsG0480021019.01.T01 MTR_3g089055 28.877 374 261 3 359 732 201 569 1.49e-53 194
MsG0480021019.01.T01 MTR_3g089055 28.877 374 261 3 359 732 196 564 1.95e-53 194
MsG0480021019.01.T01 MTR_7g027190 30.923 401 240 7 351 732 290 672 2.55e-53 196
MsG0480021019.01.T01 MTR_4g104020 29.899 398 248 8 350 732 138 519 5.90e-53 192
MsG0480021019.01.T01 MTR_3g065980 30.435 414 251 8 336 732 146 539 5.29e-50 184
MsG0480021019.01.T01 MTR_7g074650 30.270 370 240 7 365 734 442 793 2.71e-46 177
MsG0480021019.01.T01 MTR_4g076140 27.293 458 261 9 337 732 21 468 2.83e-45 169
MsG0480021019.01.T01 MTR_2g034260 29.899 398 249 9 351 732 200 583 4.50e-44 168
MsG0480021019.01.T01 MTR_2g034250 29.873 395 254 9 351 732 200 584 4.80e-43 165
MsG0480021019.01.T01 MTR_5g009080 27.356 435 246 10 358 732 53 477 5.01e-41 157
MsG0480021019.01.T01 MTR_3g022830 26.366 421 249 8 362 732 26 435 1.26e-40 155
MsG0480021019.01.T01 MTR_4g102790 26.804 388 262 10 357 734 288 663 1.90e-39 155
MsG0480021019.01.T01 MTR_4g076020 27.224 371 243 5 365 735 88 431 4.24e-39 150
MsG0480021019.01.T01 MTR_4g097080 28.312 385 256 10 359 734 131 504 5.54e-38 149
MsG0480021019.01.T01 MTR_2g089100 26.650 409 257 9 358 735 49 445 1.28e-37 147
MsG0480021019.01.T01 MTR_2g034280 27.990 393 261 9 351 732 193 574 3.94e-36 144
MsG0480021019.01.T01 MTR_1g069725 27.763 389 245 14 353 732 101 462 5.90e-36 142
MsG0480021019.01.T01 MTR_1g096030 30.250 400 236 14 358 732 77 458 1.52e-34 138
MsG0480021019.01.T01 MTR_3g072710 26.799 403 263 10 350 732 109 499 2.54e-33 135
MsG0480021019.01.T01 MTR_5g015490 25.916 382 273 5 360 734 113 491 1.77e-32 132
MsG0480021019.01.T01 MTR_4g077760 27.198 364 239 9 377 732 209 554 3.87e-32 132
MsG0480021019.01.T01 MTR_7g109580 28.205 390 257 12 351 732 179 553 1.70e-30 127
MsG0480021019.01.T01 MTR_5g058860 28.499 393 246 12 362 733 119 497 1.89e-30 126
MsG0480021019.01.T01 MTR_5g015950 23.709 426 268 11 358 735 32 448 1.92e-30 125
MsG0480021019.01.T01 MTR_3g053270 23.709 426 268 11 358 735 32 448 1.92e-30 125
MsG0480021019.01.T01 MTR_7g057230 25.069 363 251 7 377 733 310 657 2.95e-30 127
MsG0480021019.01.T01 MTR_4g095500 24.582 419 271 9 358 735 56 470 4.02e-30 125
MsG0480021019.01.T01 MTR_6g047750 26.494 385 250 12 362 732 296 661 1.79e-29 125
MsG0480021019.01.T01 MTR_1g086970 26.434 401 257 13 351 732 96 477 6.24e-29 121
MsG0480021019.01.T01 MTR_8g093070 26.895 409 246 17 346 735 124 498 3.28e-28 119
MsG0480021019.01.T01 MTR_2g099110 25.667 300 213 4 361 659 74 364 1.14e-21 99.4
MsG0480021019.01.T01 MTR_0092s0100 22.475 396 286 7 338 732 352 727 3.12e-15 80.1
MsG0480021019.01.T01 MTR_0092s0100 22.475 396 286 7 338 732 355 730 3.27e-15 80.1
MsG0480021019.01.T01 MTR_8g020840 24.352 386 233 14 361 719 171 524 1.52e-14 77.4
MsG0480021019.01.T01 MTR_4g026485 24.000 375 260 9 362 732 270 623 1.68e-14 77.8
MsG0480021019.01.T01 MTR_3g087300 44.000 75 32 2 316 380 134 208 6.98e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021019.01.T01 AT1G07530 47.151 702 287 17 96 735 88 767 0.0 576
MsG0480021019.01.T01 AT2G29060 47.793 657 280 15 88 734 53 656 0.0 562
MsG0480021019.01.T01 AT2G29060 47.734 662 310 14 88 734 53 693 0.0 557
MsG0480021019.01.T01 AT2G29065 45.776 651 283 15 96 735 39 630 0.0 533
MsG0480021019.01.T01 AT1G07520 51.136 528 240 8 214 735 16 531 1.81e-179 523
MsG0480021019.01.T01 AT1G07520 51.136 528 240 8 214 735 16 531 1.81e-179 523
MsG0480021019.01.T01 AT1G07520 46.037 656 307 12 96 735 72 696 2.36e-179 529
MsG0480021019.01.T01 AT1G07520 46.037 656 307 12 96 735 71 695 2.63e-179 529
MsG0480021019.01.T01 AT2G37650 43.510 678 324 19 83 734 58 702 1.13e-167 499
MsG0480021019.01.T01 AT2G37650 43.510 678 324 19 83 734 70 714 1.58e-167 499
MsG0480021019.01.T01 AT3G46600 50.111 451 208 5 285 735 116 549 1.99e-152 455
MsG0480021019.01.T01 AT3G46600 50.111 451 208 5 285 735 148 581 2.38e-152 456
MsG0480021019.01.T01 AT5G59450 47.071 495 238 8 249 735 122 600 1.66e-149 449
MsG0480021019.01.T01 AT3G46600 52.910 378 173 2 358 735 1 373 1.99e-141 420
MsG0480021019.01.T01 AT2G04890 32.181 376 243 4 357 732 49 412 2.05e-60 209
MsG0480021019.01.T01 AT1G50600 32.181 376 250 3 357 732 155 525 6.30e-60 211
MsG0480021019.01.T01 AT1G50600 32.181 376 250 3 357 732 226 596 2.56e-59 211
MsG0480021019.01.T01 AT1G50600 32.181 376 250 3 357 732 230 600 4.07e-59 211
MsG0480021019.01.T01 AT5G48150 30.585 376 257 3 357 732 118 489 1.25e-57 204
MsG0480021019.01.T01 AT5G48150 30.585 376 257 3 357 732 118 489 1.25e-57 204
MsG0480021019.01.T01 AT5G48150 30.585 376 257 3 357 732 118 489 1.25e-57 204
MsG0480021019.01.T01 AT5G48150 30.585 376 257 3 357 732 118 489 1.25e-57 204
MsG0480021019.01.T01 AT1G21450 30.585 376 253 5 359 732 223 592 4.11e-55 199
MsG0480021019.01.T01 AT4G17230 30.918 414 276 5 325 734 119 526 5.10e-53 192
MsG0480021019.01.T01 AT4G17230 30.918 414 276 5 325 734 119 526 5.10e-53 192
MsG0480021019.01.T01 AT1G66350 31.234 381 233 10 356 732 150 505 4.20e-48 178
MsG0480021019.01.T01 AT1G50420 25.694 432 257 5 358 732 54 478 6.50e-47 174
MsG0480021019.01.T01 AT2G01570 30.208 384 239 10 356 732 219 580 1.09e-46 176
MsG0480021019.01.T01 AT3G54220 30.280 393 257 8 343 734 275 651 1.40e-46 176
MsG0480021019.01.T01 AT1G14920 30.366 382 241 9 356 732 167 528 2.88e-46 173
MsG0480021019.01.T01 AT3G03450 28.721 383 251 9 356 732 178 544 3.42e-46 173
MsG0480021019.01.T01 AT5G17490 26.190 420 280 10 320 732 119 515 1.45e-42 162
MsG0480021019.01.T01 AT5G41920 28.346 381 252 6 355 732 37 399 1.05e-41 157
MsG0480021019.01.T01 AT5G66770 26.914 405 278 8 333 732 192 583 2.48e-37 148
MsG0480021019.01.T01 AT5G52510 26.410 390 255 10 359 732 266 639 1.98e-36 146
MsG0480021019.01.T01 AT1G63100 31.231 333 215 8 357 686 273 594 2.02e-36 146
MsG0480021019.01.T01 AT1G63100 31.231 333 215 8 357 686 248 569 2.29e-36 145
MsG0480021019.01.T01 AT4G37650 25.445 393 268 10 360 734 145 530 1.55e-34 139
MsG0480021019.01.T01 AT3G50650 29.283 321 208 5 370 684 184 491 1.34e-33 136
MsG0480021019.01.T01 AT3G49950 26.854 391 264 10 358 734 27 409 2.55e-30 124
MsG0480021019.01.T01 AT1G55580 25.060 419 255 11 358 732 41 444 4.97e-26 112
MsG0480021019.01.T01 AT4G08250 26.700 397 261 14 351 732 95 476 1.13e-25 111
MsG0480021019.01.T01 AT3G13840 23.256 430 254 16 331 732 128 509 5.96e-15 79.0
MsG0480021019.01.T01 AT4G00150 24.403 377 246 12 363 732 209 553 2.71e-11 67.4

Find 163 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAATTAATGGACAAATTT+AGG 0.087513 4:+52171624 MsG0480021019.01.T01:CDS
GATGAGATTTAAGAATTTAT+TGG 0.142030 4:+52171253 MsG0480021019.01.T01:CDS
ACCCTCCATATCATTGATTT+TGG 0.161875 4:+52170957 MsG0480021019.01.T01:CDS
TCCATTGAATTCGGAATTAA+TGG 0.174492 4:+52171613 MsG0480021019.01.T01:CDS
AATCAATATGATAGCTTTCT+TGG 0.191887 4:+52169715 MsG0480021019.01.T01:CDS
ATGCCATACCATCGCGTTAT+TGG 0.192133 4:+52171168 MsG0480021019.01.T01:CDS
CATTCTTTGCTACACGGTTT+AGG 0.223208 4:+52171384 MsG0480021019.01.T01:CDS
AAATGCAGAACCGCATTTCT+AGG 0.241890 4:-52171299 None:intergenic
TTTGTTCAGTCAATTGTTAA+TGG 0.288838 4:+52171347 MsG0480021019.01.T01:CDS
ATCAGAGTTATGAATATCTA+AGG 0.292408 4:-52169980 None:intergenic
CAAACAGCTTCCATTGAATT+CGG 0.304465 4:+52171604 MsG0480021019.01.T01:CDS
ATTCTTTGCTACACGGTTTA+GGG 0.306681 4:+52171385 MsG0480021019.01.T01:CDS
TGAATCATCCACTTTGGATA+TGG 0.316268 4:+52170302 MsG0480021019.01.T01:CDS
TCACTAGCTTGAGGAAAGTT+TGG 0.320173 4:-52169562 None:intergenic
TGCCATACCATCGCGTTATT+GGG 0.330847 4:+52171169 MsG0480021019.01.T01:CDS
ACTCTATCCCGGTGATCTTC+AGG 0.333841 4:-52171049 None:intergenic
CATCCACTTTGGATATGGTT+AGG 0.338769 4:+52170307 MsG0480021019.01.T01:CDS
GGATACCAAAATCAATGATA+TGG 0.351602 4:-52170962 None:intergenic
CGAGTCTTCCCTCCATTTGA+TGG 0.357746 4:-52170567 None:intergenic
AGGAAGCTATCATATTGATT+TGG 0.360772 4:-52169646 None:intergenic
AGAAAGCTATCATATTGATT+TGG 0.360772 4:-52169712 None:intergenic
CTTCCCTATAGAAGGTTATA+TGG 0.365695 4:+52169768 MsG0480021019.01.T01:CDS
TGATCAGAAACAGCGGTATC+AGG 0.368328 4:-52170072 None:intergenic
TTTATATGCTTCCACATGTT+GGG 0.369926 4:+52171730 MsG0480021019.01.T01:CDS
CATATAAACAGTGGCAGGTT+AGG 0.372839 4:+52171564 MsG0480021019.01.T01:CDS
ATTGCTATTGCTGTTGCTGC+TGG 0.378194 4:-52170010 None:intergenic
GGCCTTGAGGCACGCCTTGT+CGG 0.379088 4:+52170768 MsG0480021019.01.T01:CDS
ATTAGCATTCCTGTTGTCAT+TGG 0.384143 4:-52170667 None:intergenic
CGCCTTGTCGGCGATGGTAC+TGG 0.387590 4:+52170780 MsG0480021019.01.T01:CDS
ATTTCTCAACTTCATTCTAC+TGG 0.395432 4:+52170129 MsG0480021019.01.T01:CDS
TAGTGATGGACTCAGAGATT+TGG 0.396758 4:+52170155 MsG0480021019.01.T01:CDS
ATATCTAAGGGGTGTTGATT+AGG 0.398335 4:-52169967 None:intergenic
ATCCCGGTGATCTTCAGGTT+TGG 0.401423 4:-52171044 None:intergenic
AGGAAGCTATCATATTCATT+TGG 0.404865 4:-52169679 None:intergenic
ATTATCAGAGATGTTTGATA+AGG 0.416031 4:+52170461 MsG0480021019.01.T01:CDS
AGAGAATCCGTTTGTGTTGA+AGG 0.418700 4:+52170335 MsG0480021019.01.T01:CDS
TCCATTAATTCCGAATTCAA+TGG 0.422266 4:-52171614 None:intergenic
TACTACCACTTTGGTGAAGA+AGG 0.425321 4:+52169598 MsG0480021019.01.T01:CDS
GCCACTACCTTCCCTATAGA+AGG 0.428776 4:+52169760 MsG0480021019.01.T01:CDS
GAGGCCATATAACCTTCTAT+AGG 0.431388 4:-52169772 None:intergenic
CTGCCACTGTTTATATGTCT+CGG 0.432575 4:-52171558 None:intergenic
ATGAGCTACTGAAGCAGATT+AGG 0.435797 4:+52170688 MsG0480021019.01.T01:CDS
AGGCAACATTCTTCACCCTC+TGG 0.447707 4:+52170708 MsG0480021019.01.T01:CDS
CTGTATATGCCAATGACAAC+AGG 0.450042 4:+52170658 MsG0480021019.01.T01:CDS
ACAAACGGTTACTACCACTT+TGG 0.452669 4:+52169589 MsG0480021019.01.T01:CDS
AGAATGAAACAATAGATTTG+AGG 0.453249 4:+52170610 MsG0480021019.01.T01:CDS
GGCAACATTCTTCACCCTCT+GGG 0.453926 4:+52170709 MsG0480021019.01.T01:CDS
ATGGAAAGAATCGAAGAAAC+TGG 0.455010 4:+52171095 MsG0480021019.01.T01:CDS
TTTCTTGGTGCTGATCCACT+TGG 0.458368 4:+52169730 MsG0480021019.01.T01:CDS
GTTTCTTCGATTCTTTCCAT+TGG 0.459734 4:-52171092 None:intergenic
TTCAAGAAAAGTTTAGAAGA+AGG 0.460061 4:+52170237 MsG0480021019.01.T01:CDS
AGGCCATATAACCTTCTATA+GGG 0.460382 4:-52169771 None:intergenic
ATCCACTTTGGATATGGTTA+GGG 0.463279 4:+52170308 MsG0480021019.01.T01:CDS
TTTCTACCCTTCAACACAAA+CGG 0.464697 4:-52170342 None:intergenic
CAGTCATTTGTAAGCTAAGT+GGG 0.470257 4:-52169897 None:intergenic
GTGGTAACATTGCTGTAACT+TGG 0.472903 4:-52171648 None:intergenic
AGGTTATATGGCCTCGGCGA+CGG 0.474767 4:+52169780 MsG0480021019.01.T01:CDS
GACAACAATTGGATGCTTCA+AGG 0.476004 4:+52171692 MsG0480021019.01.T01:CDS
GGGATAGAGTTCCCTTTACC+TGG 0.477006 4:+52171062 MsG0480021019.01.T01:CDS
GTAGAGATCCTCTTGGTGTT+CGG 0.479560 4:-52170825 None:intergenic
GAATGAAGTTGAGAAATAGC+AGG 0.479774 4:-52170123 None:intergenic
AAGAACAAGAAGAAGAAGCT+TGG 0.480178 4:+52170394 MsG0480021019.01.T01:CDS
AACAGCGGTATCAGGTGAAA+GGG 0.482883 4:-52170064 None:intergenic
TGCCACTGTTTATATGTCTC+GGG 0.483709 4:-52171557 None:intergenic
CCGCAGCCTCAACTCTTGAC+TGG 0.485147 4:+52170276 MsG0480021019.01.T01:CDS
GAGGAGTCACCTCCATCAAA+TGG 0.486751 4:+52170555 MsG0480021019.01.T01:CDS
CAAGCTAGTGATTTCACAAA+CGG 0.489712 4:+52169574 MsG0480021019.01.T01:CDS
TTGGCTCATTACTTTGCCAA+TGG 0.490767 4:+52170747 MsG0480021019.01.T01:CDS
TTGGACGAAAACCAGGTAAA+GGG 0.491920 4:-52171073 None:intergenic
ACAATTGGATGCTTCAAGGT+TGG 0.492282 4:+52171696 MsG0480021019.01.T01:CDS
CTTTCCATTGGACGAAAACC+AGG 0.495527 4:-52171080 None:intergenic
GAAAATGATTCCTTGCAGAA+TGG 0.503064 4:+52170519 MsG0480021019.01.T01:CDS
TTGGCCACTGAAAACCATAT+AGG 0.503360 4:-52170983 None:intergenic
TGGGGATGGACCACAGAGGT+TGG 0.505585 4:+52170728 MsG0480021019.01.T01:CDS
CCGGTGATCTTCAGGTTTGG+AGG 0.507786 4:-52171041 None:intergenic
TTCCCAATAACGCGATGGTA+TGG 0.510255 4:-52171171 None:intergenic
GCAGAATGGACAAGTGAAAA+CGG 0.510872 4:+52170533 MsG0480021019.01.T01:CDS
AAGGCGTGCCTCAAGGCCAT+TGG 0.511609 4:-52170763 None:intergenic
TATAGAAGGTTATATGGCCT+CGG 0.515236 4:+52169774 MsG0480021019.01.T01:CDS
CATTCTTCACCCTCTGGGGA+TGG 0.516297 4:+52170714 MsG0480021019.01.T01:CDS
ATTCATTTGGATCAGCATCA+AGG 0.522321 4:-52169666 None:intergenic
TTGGGAAACAATTCGAGTTG+AGG 0.525214 4:+52171187 MsG0480021019.01.T01:CDS
CGCCGACAAGGCGTGCCTCA+AGG 0.525318 4:-52170770 None:intergenic
CTAAACCGTGTAGCAAAGAA+TGG 0.525919 4:-52171383 None:intergenic
TCAGTCATTTGTAAGCTAAG+TGG 0.527232 4:-52169898 None:intergenic
GGATTCTTCTATTACACAGA+TGG 0.528072 4:+52170176 MsG0480021019.01.T01:CDS
GGTATGGCATTAAACTCAAA+GGG 0.528598 4:-52171155 None:intergenic
ATTGGACGAAAACCAGGTAA+AGG 0.530391 4:-52171074 None:intergenic
CATTAAACTCAAAGGGAACA+TGG 0.533197 4:-52171148 None:intergenic
TACCACGCGAAAACAAATAC+AGG 0.534979 4:+52171456 MsG0480021019.01.T01:CDS
CGAGACATATAAACAGTGGC+AGG 0.537307 4:+52171559 MsG0480021019.01.T01:CDS
CAGGTTAGGAATACAAGAGC+TGG 0.537591 4:+52171578 MsG0480021019.01.T01:CDS
CTCCCTAACCATATCCAAAG+TGG 0.538149 4:-52170310 None:intergenic
GTCAAGAGTTGAGGCTGCGG+AGG 0.544335 4:-52170273 None:intergenic
AAACAGCGGTATCAGGTGAA+AGG 0.544940 4:-52170065 None:intergenic
CACTTTGGATATGGTTAGGG+AGG 0.545160 4:+52170311 MsG0480021019.01.T01:CDS
GAGAATCCGTTTGTGTTGAA+GGG 0.545933 4:+52170336 MsG0480021019.01.T01:CDS
CTCCAGTACCATCGCCGACA+AGG 0.546196 4:-52170782 None:intergenic
AATGAAGTTGAGAAATAGCA+GGG 0.546812 4:-52170122 None:intergenic
TTAGATATTCATAACTCTGA+TGG 0.546938 4:+52169982 MsG0480021019.01.T01:CDS
CATTCTACTGGTGTTAGTGA+TGG 0.548607 4:+52170141 MsG0480021019.01.T01:CDS
GTTCATAAACCAAATCCTGA+TGG 0.550468 4:+52169843 MsG0480021019.01.T01:CDS
TCAGAGTTATGAATATCTAA+GGG 0.551258 4:-52169979 None:intergenic
TACCAAAATCAATGATATGG+AGG 0.553791 4:-52170959 None:intergenic
CTCCAAACCTGAAGATCACC+GGG 0.554977 4:+52171042 MsG0480021019.01.T01:CDS
TGGTATGGCATTAAACTCAA+AGG 0.555962 4:-52171156 None:intergenic
AGGTAAAGGGAACTCTATCC+CGG 0.560031 4:-52171060 None:intergenic
CCTCCAAACCTGAAGATCAC+CGG 0.561178 4:+52171041 MsG0480021019.01.T01:CDS
AAATCAGTGTCTTCGAGGGA+AGG 0.562271 4:-52169805 None:intergenic
GAGGCACGCCTTGTCGGCGA+TGG 0.563864 4:+52170774 MsG0480021019.01.T01:CDS
ATGAACGTTGTAGCTTGTGA+AGG 0.570356 4:+52171515 MsG0480021019.01.T01:CDS
CCAGTCAAGAGTTGAGGCTG+CGG 0.571987 4:-52170276 None:intergenic
ATTCGCCATTCTTTGCTACA+CGG 0.575217 4:+52171378 MsG0480021019.01.T01:CDS
CATATAACCTTCTATAGGGA+AGG 0.576430 4:-52169767 None:intergenic
TGGATGCTTCAAGGTTGGAA+AGG 0.577566 4:+52171701 MsG0480021019.01.T01:CDS
TCTTGGTGTTCGGAGAGGAA+TGG 0.578017 4:-52170815 None:intergenic
CTCAGCAGTAGAGATCCTCT+TGG 0.580706 4:-52170832 None:intergenic
ACCTTCTATAGGGAAGGTAG+TGG 0.581330 4:-52169761 None:intergenic
GTGATGTGAGTTGATTATGC+TGG 0.583220 4:-52171755 None:intergenic
GGGTGTTGATTAGGAGAACG+AGG 0.585085 4:-52169958 None:intergenic
TACTCCCTTCTTCACCAAAG+TGG 0.586539 4:-52169603 None:intergenic
ACTACCACTTTGGTGAAGAA+GGG 0.587510 4:+52169599 MsG0480021019.01.T01:CDS
CTTTGCTACACGGTTTAGGG+AGG 0.591419 4:+52171388 MsG0480021019.01.T01:CDS
ATGGAAGCGCTTGCAATAGT+CGG 0.593097 4:-52171129 None:intergenic
TTACTTTGCCAATGGCCTTG+AGG 0.593344 4:+52170755 MsG0480021019.01.T01:CDS
ATTGATTTGGATCAGCCTCA+AGG 0.595193 4:-52169699 None:intergenic
AAACAAATACAGGATGCTGA+TGG 0.598030 4:+52171466 MsG0480021019.01.T01:CDS
CTCTGTGGTCCATCCCCAGA+GGG 0.598960 4:-52170723 None:intergenic
TTTCACTTGTCCATTCTGCA+AGG 0.603209 4:-52170529 None:intergenic
ACCAAAATCAATGATATGGA+GGG 0.610467 4:-52170958 None:intergenic
ATACAGGATGCTGATGGAGA+GGG 0.620955 4:+52171472 MsG0480021019.01.T01:CDS
AAGCTAAGTGGGTCATAGAA+CGG 0.623038 4:-52169886 None:intergenic
ATTGTTTCCCAATAACGCGA+TGG 0.623674 4:-52171176 None:intergenic
GTCTTCCCTCCATTTGATGG+AGG 0.626646 4:-52170564 None:intergenic
GAGTCACCTCCATCAAATGG+AGG 0.628730 4:+52170558 MsG0480021019.01.T01:CDS
TCAAAACCAGTCAAGAGTTG+AGG 0.630836 4:-52170282 None:intergenic
AATACAGGATGCTGATGGAG+AGG 0.637418 4:+52171471 MsG0480021019.01.T01:CDS
ATTCCTCTCCGAACACCAAG+AGG 0.643154 4:+52170817 MsG0480021019.01.T01:CDS
AGTCACCTCCATCAAATGGA+GGG 0.643984 4:+52170559 MsG0480021019.01.T01:CDS
CCTCTGTGGTCCATCCCCAG+AGG 0.644825 4:-52170724 None:intergenic
GCAACATTCTTCACCCTCTG+GGG 0.646104 4:+52170710 MsG0480021019.01.T01:CDS
TTATGCTGGCACCCAACATG+TGG 0.647174 4:-52171741 None:intergenic
AAGGTTTAGAGAGAGTTGAG+AGG 0.649221 4:+52171534 MsG0480021019.01.T01:CDS
AAGACTCGTCGTAAGAAACA+AGG 0.649427 4:+52170582 MsG0480021019.01.T01:CDS
ACAGCGGTATCAGGTGAAAG+GGG 0.655960 4:-52170063 None:intergenic
GATCCTCTTGGTGTTCGGAG+AGG 0.659641 4:-52170820 None:intergenic
AGCTATTAGTGCTATTGACG+AGG 0.669842 4:+52170434 MsG0480021019.01.T01:CDS
CAATAGCAATAGCAGCGTCG+AGG 0.672364 4:+52170023 MsG0480021019.01.T01:CDS
CAGAGTTATGAATATCTAAG+GGG 0.672632 4:-52169978 None:intergenic
TGAATATGATAGCTTCCTTG+AGG 0.674292 4:+52169684 MsG0480021019.01.T01:CDS
TTTGTGAAATCACTAGCTTG+AGG 0.676421 4:-52169571 None:intergenic
AGCAAACAGTCCTAGAAATG+CGG 0.677440 4:+52171289 MsG0480021019.01.T01:CDS
ATGAAGTTGAGAAATAGCAG+GGG 0.678292 4:-52170121 None:intergenic
AAGTAATGAGCCAACCTCTG+TGG 0.682694 4:-52170738 None:intergenic
GAGGGAAGGATCCGTCGCCG+AGG 0.685761 4:-52169791 None:intergenic
TCTTAAAATCAAGAGCAATG+AGG 0.688807 4:+52171211 MsG0480021019.01.T01:CDS
GTAGTGGCTGCAAAGCCAAG+TGG 0.693207 4:-52169745 None:intergenic
GGCCCGAGACATATAAACAG+TGG 0.698214 4:+52171555 MsG0480021019.01.T01:CDS
CTGATGGAGAGGGAAAGTAT+CGG 0.714910 4:+52171482 MsG0480021019.01.T01:CDS
ATTAACATGATCAGAAACAG+CGG 0.729969 4:-52170079 None:intergenic
TGGTGAAGAAGGGAGTACAG+TGG 0.749828 4:+52169609 MsG0480021019.01.T01:CDS
GAATGGACAAGTGAAAACGG+AGG 0.763230 4:+52170536 MsG0480021019.01.T01:CDS
CCTCTGGGGATGGACCACAG+AGG 0.797161 4:+52170724 MsG0480021019.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAAAAACTTTATAAGTAT+TGG - Chr4:52171005-52171024 None:intergenic 15.0%
!! GATGAGATTTAAGAATTTAT+TGG + Chr4:52171253-52171272 MsG0480021019.01.T01:CDS 20.0%
!!! TTCTAAACTTTTCTTGAATA+GGG - Chr4:52170235-52170254 None:intergenic 20.0%
! AATCAATATGATAGCTTTCT+TGG + Chr4:52169715-52169734 MsG0480021019.01.T01:CDS 25.0%
! AGAATGAAACAATAGATTTG+AGG + Chr4:52170610-52170629 MsG0480021019.01.T01:CDS 25.0%
! ATCAGAGTTATGAATATCTA+AGG - Chr4:52169983-52170002 None:intergenic 25.0%
! ATTATCAGAGATGTTTGATA+AGG + Chr4:52170461-52170480 MsG0480021019.01.T01:CDS 25.0%
! TCAGAGTTATGAATATCTAA+GGG - Chr4:52169982-52170001 None:intergenic 25.0%
! TTAGATATTCATAACTCTGA+TGG + Chr4:52169982-52170001 MsG0480021019.01.T01:CDS 25.0%
! TTCAAGAAAAGTTTAGAAGA+AGG + Chr4:52170237-52170256 MsG0480021019.01.T01:CDS 25.0%
! TTTGTTCAGTCAATTGTTAA+TGG + Chr4:52171347-52171366 MsG0480021019.01.T01:CDS 25.0%
!! AAGTATGCAAACTTTTTGAA+AGG - Chr4:52170894-52170913 None:intergenic 25.0%
!! AAGTTTTTATCAGATAGAGA+AGG + Chr4:52171014-52171033 MsG0480021019.01.T01:CDS 25.0%
!! AGAAAGCTATCATATTGATT+TGG - Chr4:52169715-52169734 None:intergenic 25.0%
!! CTTCTAAACTTTTCTTGAAT+AGG - Chr4:52170236-52170255 None:intergenic 25.0%
!! GAATCATTTTCATTGCATAA+TGG - Chr4:52170510-52170529 None:intergenic 25.0%
!! TTTTTGATGTAGACAACAAT+TGG + Chr4:52171681-52171700 MsG0480021019.01.T01:CDS 25.0%
!!! ATTGATTTTGGTATCCTATA+TGG + Chr4:52170969-52170988 MsG0480021019.01.T01:CDS 25.0%
AATGAAGTTGAGAAATAGCA+GGG - Chr4:52170125-52170144 None:intergenic 30.0%
ACCAAAATCAATGATATGGA+GGG - Chr4:52170961-52170980 None:intergenic 30.0%
AGGAAGCTATCATATTCATT+TGG - Chr4:52169682-52169701 None:intergenic 30.0%
ATTAACATGATCAGAAACAG+CGG - Chr4:52170082-52170101 None:intergenic 30.0%
ATTGACTGAACAAAAATAGC+AGG - Chr4:52171341-52171360 None:intergenic 30.0%
ATTTCTCAACTTCATTCTAC+TGG + Chr4:52170129-52170148 MsG0480021019.01.T01:CDS 30.0%
CAGAGTTATGAATATCTAAG+GGG - Chr4:52169981-52170000 None:intergenic 30.0%
CATCAAAAACAAAGTCTTTG+TGG - Chr4:52171670-52171689 None:intergenic 30.0%
GGATACCAAAATCAATGATA+TGG - Chr4:52170965-52170984 None:intergenic 30.0%
TACCAAAATCAATGATATGG+AGG - Chr4:52170962-52170981 None:intergenic 30.0%
TCCATTAATTCCGAATTCAA+TGG - Chr4:52171617-52171636 None:intergenic 30.0%
TCCATTGAATTCGGAATTAA+TGG + Chr4:52171613-52171632 MsG0480021019.01.T01:CDS 30.0%
TCTTAAAATCAAGAGCAATG+AGG + Chr4:52171211-52171230 MsG0480021019.01.T01:CDS 30.0%
TTTATATGCTTCCACATGTT+GGG + Chr4:52171730-52171749 MsG0480021019.01.T01:CDS 30.0%
! AGGAAGCTATCATATTGATT+TGG - Chr4:52169649-52169668 None:intergenic 30.0%
! CGGAATTAATGGACAAATTT+AGG + Chr4:52171624-52171643 MsG0480021019.01.T01:CDS 30.0%
! TTTTATATGCTTCCACATGT+TGG + Chr4:52171729-52171748 MsG0480021019.01.T01:CDS 30.0%
! TTTTTATCAGATAGAGAAGG+TGG + Chr4:52171017-52171036 MsG0480021019.01.T01:CDS 30.0%
AAACAAATACAGGATGCTGA+TGG + Chr4:52171466-52171485 MsG0480021019.01.T01:CDS 35.0%
AAGAACAAGAAGAAGAAGCT+TGG + Chr4:52170394-52170413 MsG0480021019.01.T01:CDS 35.0%
AGGCCATATAACCTTCTATA+GGG - Chr4:52169774-52169793 None:intergenic 35.0%
ATCCACTTTGGATATGGTTA+GGG + Chr4:52170308-52170327 MsG0480021019.01.T01:CDS 35.0%
ATGAAGTTGAGAAATAGCAG+GGG - Chr4:52170124-52170143 None:intergenic 35.0%
ATGGAAAGAATCGAAGAAAC+TGG + Chr4:52171095-52171114 MsG0480021019.01.T01:CDS 35.0%
ATTAGCATTCCTGTTGTCAT+TGG - Chr4:52170670-52170689 None:intergenic 35.0%
ATTCATTTGGATCAGCATCA+AGG - Chr4:52169669-52169688 None:intergenic 35.0%
ATTCTTTGCTACACGGTTTA+GGG + Chr4:52171385-52171404 MsG0480021019.01.T01:CDS 35.0%
CAAACAGCTTCCATTGAATT+CGG + Chr4:52171604-52171623 MsG0480021019.01.T01:CDS 35.0%
CAAGCTAGTGATTTCACAAA+CGG + Chr4:52169574-52169593 MsG0480021019.01.T01:CDS 35.0%
CAGTCATTTGTAAGCTAAGT+GGG - Chr4:52169900-52169919 None:intergenic 35.0%
CATATAACCTTCTATAGGGA+AGG - Chr4:52169770-52169789 None:intergenic 35.0%
CATTAAACTCAAAGGGAACA+TGG - Chr4:52171151-52171170 None:intergenic 35.0%
CTTCCCTATAGAAGGTTATA+TGG + Chr4:52169768-52169787 MsG0480021019.01.T01:CDS 35.0%
GAAAATGATTCCTTGCAGAA+TGG + Chr4:52170519-52170538 MsG0480021019.01.T01:CDS 35.0%
GAATGAAGTTGAGAAATAGC+AGG - Chr4:52170126-52170145 None:intergenic 35.0%
GGATTCTTCTATTACACAGA+TGG + Chr4:52170176-52170195 MsG0480021019.01.T01:CDS 35.0%
GGTATGGCATTAAACTCAAA+GGG - Chr4:52171158-52171177 None:intergenic 35.0%
GTTCATAAACCAAATCCTGA+TGG + Chr4:52169843-52169862 MsG0480021019.01.T01:CDS 35.0%
GTTTCTTCGATTCTTTCCAT+TGG - Chr4:52171095-52171114 None:intergenic 35.0%
TATAGAAGGTTATATGGCCT+CGG + Chr4:52169774-52169793 MsG0480021019.01.T01:CDS 35.0%
TCAGTCATTTGTAAGCTAAG+TGG - Chr4:52169901-52169920 None:intergenic 35.0%
TGAAAAATCAGTGTCTTCGA+GGG - Chr4:52169812-52169831 None:intergenic 35.0%
TGAATATGATAGCTTCCTTG+AGG + Chr4:52169684-52169703 MsG0480021019.01.T01:CDS 35.0%
TGAATCATCCACTTTGGATA+TGG + Chr4:52170302-52170321 MsG0480021019.01.T01:CDS 35.0%
TGGTATGGCATTAAACTCAA+AGG - Chr4:52171159-52171178 None:intergenic 35.0%
TTTCTACCCTTCAACACAAA+CGG - Chr4:52170345-52170364 None:intergenic 35.0%
! CATTTTCTTCCATCAGGATT+TGG - Chr4:52169855-52169874 None:intergenic 35.0%
! GATAAGGTTTTGCTTGATGT+GGG + Chr4:52170477-52170496 MsG0480021019.01.T01:CDS 35.0%
! GATCAACATTTTCTTCCATC+AGG - Chr4:52169861-52169880 None:intergenic 35.0%
! GTATCCTATATGGTTTTCAG+TGG + Chr4:52170979-52170998 MsG0480021019.01.T01:CDS 35.0%
! TGATAAGGTTTTGCTTGATG+TGG + Chr4:52170476-52170495 MsG0480021019.01.T01:CDS 35.0%
! TTTGTGAAATCACTAGCTTG+AGG - Chr4:52169574-52169593 None:intergenic 35.0%
!! ATATCTAAGGGGTGTTGATT+AGG - Chr4:52169970-52169989 None:intergenic 35.0%
!!! ACCCTCCATATCATTGATTT+TGG + Chr4:52170957-52170976 MsG0480021019.01.T01:CDS 35.0%
!!! GACACTGATTTTTCAGATAC+TGG + Chr4:52169817-52169836 MsG0480021019.01.T01:CDS 35.0%
!!! TGGTTTTGAATCATCCACTT+TGG + Chr4:52170296-52170315 MsG0480021019.01.T01:CDS 35.0%
AAATGCAGAACCGCATTTCT+AGG - Chr4:52171302-52171321 None:intergenic 40.0%
AAGACTCGTCGTAAGAAACA+AGG + Chr4:52170582-52170601 MsG0480021019.01.T01:CDS 40.0%
AAGCTAAGTGGGTCATAGAA+CGG - Chr4:52169889-52169908 None:intergenic 40.0%
AAGGTTTAGAGAGAGTTGAG+AGG + Chr4:52171534-52171553 MsG0480021019.01.T01:CDS 40.0%
ACAAACGGTTACTACCACTT+TGG + Chr4:52169589-52169608 MsG0480021019.01.T01:CDS 40.0%
ACAATTGGATGCTTCAAGGT+TGG + Chr4:52171696-52171715 MsG0480021019.01.T01:CDS 40.0%
ACTACCACTTTGGTGAAGAA+GGG + Chr4:52169599-52169618 MsG0480021019.01.T01:CDS 40.0%
AGAGAATCCGTTTGTGTTGA+AGG + Chr4:52170335-52170354 MsG0480021019.01.T01:CDS 40.0%
AGCAAACAGTCCTAGAAATG+CGG + Chr4:52171289-52171308 MsG0480021019.01.T01:CDS 40.0%
ATGAGCTACTGAAGCAGATT+AGG + Chr4:52170688-52170707 MsG0480021019.01.T01:CDS 40.0%
ATTCGCCATTCTTTGCTACA+CGG + Chr4:52171378-52171397 MsG0480021019.01.T01:CDS 40.0%
ATTGGACGAAAACCAGGTAA+AGG - Chr4:52171077-52171096 None:intergenic 40.0%
ATTGTTTCCCAATAACGCGA+TGG - Chr4:52171179-52171198 None:intergenic 40.0%
CATATAAACAGTGGCAGGTT+AGG + Chr4:52171564-52171583 MsG0480021019.01.T01:CDS 40.0%
CATCCACTTTGGATATGGTT+AGG + Chr4:52170307-52170326 MsG0480021019.01.T01:CDS 40.0%
CATTCTTTGCTACACGGTTT+AGG + Chr4:52171384-52171403 MsG0480021019.01.T01:CDS 40.0%
CTAAACCGTGTAGCAAAGAA+TGG - Chr4:52171386-52171405 None:intergenic 40.0%
CTGAAAAATCAGTGTCTTCG+AGG - Chr4:52169813-52169832 None:intergenic 40.0%
CTGCCACTGTTTATATGTCT+CGG - Chr4:52171561-52171580 None:intergenic 40.0%
CTGTATATGCCAATGACAAC+AGG + Chr4:52170658-52170677 MsG0480021019.01.T01:CDS 40.0%
GACAACAATTGGATGCTTCA+AGG + Chr4:52171692-52171711 MsG0480021019.01.T01:CDS 40.0%
GAGAATCCGTTTGTGTTGAA+GGG + Chr4:52170336-52170355 MsG0480021019.01.T01:CDS 40.0%
GAGGCCATATAACCTTCTAT+AGG - Chr4:52169775-52169794 None:intergenic 40.0%
GCAGAATGGACAAGTGAAAA+CGG + Chr4:52170533-52170552 MsG0480021019.01.T01:CDS 40.0%
GTGGTAACATTGCTGTAACT+TGG - Chr4:52171651-52171670 None:intergenic 40.0%
TACCACGCGAAAACAAATAC+AGG + Chr4:52171456-52171475 MsG0480021019.01.T01:CDS 40.0%
TACTACCACTTTGGTGAAGA+AGG + Chr4:52169598-52169617 MsG0480021019.01.T01:CDS 40.0%
TCAAAACCAGTCAAGAGTTG+AGG - Chr4:52170285-52170304 None:intergenic 40.0%
TGCCACTGTTTATATGTCTC+GGG - Chr4:52171560-52171579 None:intergenic 40.0%
TTGGACGAAAACCAGGTAAA+GGG - Chr4:52171076-52171095 None:intergenic 40.0%
TTGGCCACTGAAAACCATAT+AGG - Chr4:52170986-52171005 None:intergenic 40.0%
TTGGCTCATTACTTTGCCAA+TGG + Chr4:52170747-52170766 MsG0480021019.01.T01:CDS 40.0%
TTTCACTTGTCCATTCTGCA+AGG - Chr4:52170532-52170551 None:intergenic 40.0%
! AGCTATTAGTGCTATTGACG+AGG + Chr4:52170434-52170453 MsG0480021019.01.T01:CDS 40.0%
! ATGAACGTTGTAGCTTGTGA+AGG + Chr4:52171515-52171534 MsG0480021019.01.T01:CDS 40.0%
! CATTCTACTGGTGTTAGTGA+TGG + Chr4:52170141-52170160 MsG0480021019.01.T01:CDS 40.0%
! TCACTAGCTTGAGGAAAGTT+TGG - Chr4:52169565-52169584 None:intergenic 40.0%
!! ATCCTGTATTTGTTTTCGCG+TGG - Chr4:52171461-52171480 None:intergenic 40.0%
!! ATTGATTTGGATCAGCCTCA+AGG - Chr4:52169702-52169721 None:intergenic 40.0%
!! TAGTGATGGACTCAGAGATT+TGG + Chr4:52170155-52170174 MsG0480021019.01.T01:CDS 40.0%
!! TTGGGAAACAATTCGAGTTG+AGG + Chr4:52171187-52171206 MsG0480021019.01.T01:CDS 40.0%
!! TTTACCTGGTTTTCGTCCAA+TGG + Chr4:52171076-52171095 MsG0480021019.01.T01:CDS 40.0%
AAACAGCGGTATCAGGTGAA+AGG - Chr4:52170068-52170087 None:intergenic 45.0%
AAATCAGTGTCTTCGAGGGA+AGG - Chr4:52169808-52169827 None:intergenic 45.0%
AACAGCGGTATCAGGTGAAA+GGG - Chr4:52170067-52170086 None:intergenic 45.0%
AAGTAATGAGCCAACCTCTG+TGG - Chr4:52170741-52170760 None:intergenic 45.0%
AATACAGGATGCTGATGGAG+AGG + Chr4:52171471-52171490 MsG0480021019.01.T01:CDS 45.0%
ACCTTCTATAGGGAAGGTAG+TGG - Chr4:52169764-52169783 None:intergenic 45.0%
AGGTAAAGGGAACTCTATCC+CGG - Chr4:52171063-52171082 None:intergenic 45.0%
AGTCACCTCCATCAAATGGA+GGG + Chr4:52170559-52170578 MsG0480021019.01.T01:CDS 45.0%
ATACAGGATGCTGATGGAGA+GGG + Chr4:52171472-52171491 MsG0480021019.01.T01:CDS 45.0%
ATGCCATACCATCGCGTTAT+TGG + Chr4:52171168-52171187 MsG0480021019.01.T01:CDS 45.0%
CACTTTGGATATGGTTAGGG+AGG + Chr4:52170311-52170330 MsG0480021019.01.T01:CDS 45.0%
CAGGTTAGGAATACAAGAGC+TGG + Chr4:52171578-52171597 MsG0480021019.01.T01:CDS 45.0%
CGAGACATATAAACAGTGGC+AGG + Chr4:52171559-52171578 MsG0480021019.01.T01:CDS 45.0%
CTCCCTAACCATATCCAAAG+TGG - Chr4:52170313-52170332 None:intergenic 45.0%
CTTTCCATTGGACGAAAACC+AGG - Chr4:52171083-52171102 None:intergenic 45.0%
GAATGGACAAGTGAAAACGG+AGG + Chr4:52170536-52170555 MsG0480021019.01.T01:CDS 45.0%
TACTCCCTTCTTCACCAAAG+TGG - Chr4:52169606-52169625 None:intergenic 45.0%
TGATCAGAAACAGCGGTATC+AGG - Chr4:52170075-52170094 None:intergenic 45.0%
TGCCATACCATCGCGTTATT+GGG + Chr4:52171169-52171188 MsG0480021019.01.T01:CDS 45.0%
TGGATGCTTCAAGGTTGGAA+AGG + Chr4:52171701-52171720 MsG0480021019.01.T01:CDS 45.0%
TTCCCAATAACGCGATGGTA+TGG - Chr4:52171174-52171193 None:intergenic 45.0%
! ATTGCTATTGCTGTTGCTGC+TGG - Chr4:52170013-52170032 None:intergenic 45.0%
! CTGATGGAGAGGGAAAGTAT+CGG + Chr4:52171482-52171501 MsG0480021019.01.T01:CDS 45.0%
! TTACTTTGCCAATGGCCTTG+AGG + Chr4:52170755-52170774 MsG0480021019.01.T01:CDS 45.0%
!! ATGGAAGCGCTTGCAATAGT+CGG - Chr4:52171132-52171151 None:intergenic 45.0%
!! GTAGAGATCCTCTTGGTGTT+CGG - Chr4:52170828-52170847 None:intergenic 45.0%
!! TTTCTTGGTGCTGATCCACT+TGG + Chr4:52169730-52169749 MsG0480021019.01.T01:CDS 45.0%
ACAGCGGTATCAGGTGAAAG+GGG - Chr4:52170066-52170085 None:intergenic 50.0%
ACTCTATCCCGGTGATCTTC+AGG - Chr4:52171052-52171071 None:intergenic 50.0%
AGGCAACATTCTTCACCCTC+TGG + Chr4:52170708-52170727 MsG0480021019.01.T01:CDS 50.0%
ATTCCTCTCCGAACACCAAG+AGG + Chr4:52170817-52170836 MsG0480021019.01.T01:CDS 50.0%
CAATAGCAATAGCAGCGTCG+AGG + Chr4:52170023-52170042 MsG0480021019.01.T01:CDS 50.0%
CCTCCAAACCTGAAGATCAC+CGG + Chr4:52171041-52171060 MsG0480021019.01.T01:CDS 50.0%
CGAGTCTTCCCTCCATTTGA+TGG - Chr4:52170570-52170589 None:intergenic 50.0%
CTCAGCAGTAGAGATCCTCT+TGG - Chr4:52170835-52170854 None:intergenic 50.0%
CTCCAAACCTGAAGATCACC+GGG + Chr4:52171042-52171061 MsG0480021019.01.T01:CDS 50.0%
CTTTGCTACACGGTTTAGGG+AGG + Chr4:52171388-52171407 MsG0480021019.01.T01:CDS 50.0%
GAGGAGTCACCTCCATCAAA+TGG + Chr4:52170555-52170574 MsG0480021019.01.T01:CDS 50.0%
GAGTCACCTCCATCAAATGG+AGG + Chr4:52170558-52170577 MsG0480021019.01.T01:CDS 50.0%
GCAACATTCTTCACCCTCTG+GGG + Chr4:52170710-52170729 MsG0480021019.01.T01:CDS 50.0%
GCCACTACCTTCCCTATAGA+AGG + Chr4:52169760-52169779 MsG0480021019.01.T01:CDS 50.0%
GGCAACATTCTTCACCCTCT+GGG + Chr4:52170709-52170728 MsG0480021019.01.T01:CDS 50.0%
GGCCCGAGACATATAAACAG+TGG + Chr4:52171555-52171574 MsG0480021019.01.T01:CDS 50.0%
GGGATAGAGTTCCCTTTACC+TGG + Chr4:52171062-52171081 MsG0480021019.01.T01:CDS 50.0%
GTCTTCCCTCCATTTGATGG+AGG - Chr4:52170567-52170586 None:intergenic 50.0%
TTATGCTGGCACCCAACATG+TGG - Chr4:52171744-52171763 None:intergenic 50.0%
! ATCCCGGTGATCTTCAGGTT+TGG - Chr4:52171047-52171066 None:intergenic 50.0%
! TGGTGAAGAAGGGAGTACAG+TGG + Chr4:52169609-52169628 MsG0480021019.01.T01:CDS 50.0%
!! GGGTGTTGATTAGGAGAACG+AGG - Chr4:52169961-52169980 None:intergenic 50.0%
!! TCTTGGTGTTCGGAGAGGAA+TGG - Chr4:52170818-52170837 None:intergenic 50.0%
AGGTTATATGGCCTCGGCGA+CGG + Chr4:52169780-52169799 MsG0480021019.01.T01:CDS 55.0%
CCAGTCAAGAGTTGAGGCTG+CGG - Chr4:52170279-52170298 None:intergenic 55.0%
GTAGTGGCTGCAAAGCCAAG+TGG - Chr4:52169748-52169767 None:intergenic 55.0%
! CATTCTTCACCCTCTGGGGA+TGG + Chr4:52170714-52170733 MsG0480021019.01.T01:CDS 55.0%
! CCGGTGATCTTCAGGTTTGG+AGG - Chr4:52171044-52171063 None:intergenic 55.0%
!! GATCCTCTTGGTGTTCGGAG+AGG - Chr4:52170823-52170842 None:intergenic 55.0%
AAGGCGTGCCTCAAGGCCAT+TGG - Chr4:52170766-52170785 None:intergenic 60.0%
CCGCAGCCTCAACTCTTGAC+TGG + Chr4:52170276-52170295 MsG0480021019.01.T01:CDS 60.0%
CTCCAGTACCATCGCCGACA+AGG - Chr4:52170785-52170804 None:intergenic 60.0%
CTCTGTGGTCCATCCCCAGA+GGG - Chr4:52170726-52170745 None:intergenic 60.0%
GTCAAGAGTTGAGGCTGCGG+AGG - Chr4:52170276-52170295 None:intergenic 60.0%
TGGGGATGGACCACAGAGGT+TGG + Chr4:52170728-52170747 MsG0480021019.01.T01:CDS 60.0%
CCTCTGTGGTCCATCCCCAG+AGG - Chr4:52170727-52170746 None:intergenic 65.0%
CGCCTTGTCGGCGATGGTAC+TGG + Chr4:52170780-52170799 MsG0480021019.01.T01:CDS 65.0%
GGCCTTGAGGCACGCCTTGT+CGG + Chr4:52170768-52170787 MsG0480021019.01.T01:CDS 65.0%
! CCTCTGGGGATGGACCACAG+AGG + Chr4:52170724-52170743 MsG0480021019.01.T01:CDS 65.0%
CGCCGACAAGGCGTGCCTCA+AGG - Chr4:52170773-52170792 None:intergenic 70.0%
GAGGCACGCCTTGTCGGCGA+TGG + Chr4:52170774-52170793 MsG0480021019.01.T01:CDS 70.0%
GAGGGAAGGATCCGTCGCCG+AGG - Chr4:52169794-52169813 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 52169556 52171763 52169556 ID=MsG0480021019.01;Name=MsG0480021019.01
Chr4 mRNA 52169556 52171763 52169556 ID=MsG0480021019.01.T01;Parent=MsG0480021019.01;Name=MsG0480021019.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|735
Chr4 exon 52169556 52171763 52169556 ID=MsG0480021019.01.T01:exon:28478;Parent=MsG0480021019.01.T01
Chr4 CDS 52169556 52171763 52169556 ID=MsG0480021019.01.T01:cds;Parent=MsG0480021019.01.T01
Gene Sequence

>MsG0480021019.01.T01

ATGGATCCAAACTTTCCTCAAGCTAGTGATTTCACAAACGGTTACTACCACTTTGGTGAAGAAGGGAGTACAGTGGTCTCTGAGTTTGATCCAAATCAATATGATAGCTTCCTTGATGCTGATCCAAATGAATATGATAGCTTCCTTGAGGCTGATCCAAATCAATATGATAGCTTTCTTGGTGCTGATCCACTTGGCTTTGCAGCCACTACCTTCCCTATAGAAGGTTATATGGCCTCGGCGACGGATCCTTCCCTCGAAGACACTGATTTTTCAGATACTGGTAAGTTCATAAACCAAATCCTGATGGAAGAAAATGTTGATCAGAGACCGTTCTATGACCCACTTAGCTTACAAATGACTGAAAAATCATTCTATGATGCTCTTTTACACACAAATAAACCTCGTTCTCCTAATCAACACCCCTTAGATATTCATAACTCTGATGGCACAACCAGCAGCAACAGCAATAGCAATAGCAGCGTCGAGGATTCTCGAGAGTTAAAACCCCTTTCACCTGATACCGCTGTTTCTGATCATGTTAATCATGTTTTTCAGTTTAATTCCCCTGCTATTTCTCAACTTCATTCTACTGGTGTTAGTGATGGACTCAGAGATTTGGATTCTTCTATTACACAGATGGCACAAAACATTTTCAGTGATGTAGATTCTGTTTCCCTATTCAAGAAAAGTTTAGAAGAAGGCAACAAGTTTCTTCCTCCGCAGCCTCAACTCTTGACTGGTTTTGAATCATCCACTTTGGATATGGTTAGGGAGGAAGAGAATCCGTTTGTGTTGAAGGGTAGAAAGAATCACAAGCGCGAAGAAAGTTTTAGTCAAGAACAAGAAGAAGAAGCTTGGAGAAGTAGCAAGCAATCAGCTATTAGTGCTATTGACGAGGATGAATTATCAGAGATGTTTGATAAGGTTTTGCTTGATGTGGGACATTTGCCATTATGCAATGAAAATGATTCCTTGCAGAATGGACAAGTGAAAACGGAGGAGTCACCTCCATCAAATGGAGGGAAGACTCGTCGTAAGAAACAAGGCAAGAAGAATGAAACAATAGATTTGAGGAATCTTCTGCTTATGTGTTCACAATCTGTATATGCCAATGACAACAGGAATGCTAATGAGCTACTGAAGCAGATTAGGCAACATTCTTCACCCTCTGGGGATGGACCACAGAGGTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCCTTGTCGGCGATGGTACTGGAGCACAAACATTCCATTCCTCTCCGAACACCAAGAGGATCTCTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTACTAGTCCTTTCAAAAAGTTTGCATACTTCTTTGCAAATAAGATGATTATGAAAGCTTCTGCAAATGCTGAAACCCTCCATATCATTGATTTTGGTATCCTATATGGTTTTCAGTGGCCAATACTTATAAAGTTTTTATCAGATAGAGAAGGTGGACCTCCAAACCTGAAGATCACCGGGATAGAGTTCCCTTTACCTGGTTTTCGTCCAATGGAAAGAATCGAAGAAACTGGTCGTCGTCTTGCCGACTATTGCAAGCGCTTCCATGTTCCCTTTGAGTTTAATGCCATACCATCGCGTTATTGGGAAACAATTCGAGTTGAGGATCTTAAAATCAAGAGCAATGAGGTTGTTGTTGTGAACTCTTTGATGAGATTTAAGAATTTATTGGATGAAAGTATTGAAGCAAACAGTCCTAGAAATGCGGTTCTGCATTTAATCAGAAAGATAAATCCTGCTATTTTTGTTCAGTCAATTGTTAATGGATCATATAATTCGCCATTCTTTGCTACACGGTTTAGGGAGGCGCTGTTTCATTTTTCTGCTCTTTATGATATGTTTGACACTGTCATACCACGCGAAAACAAATACAGGATGCTGATGGAGAGGGAAAGTATCGGTAGAGAAGCTATGAACGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCCGAGACATATAAACAGTGGCAGGTTAGGAATACAAGAGCTGGTTTCAAACAGCTTCCATTGAATTCGGAATTAATGGACAAATTTAGGACCAAGTTACAGCAATGTTACCACAAAGACTTTGTTTTTGATGTAGACAACAATTGGATGCTTCAAGGTTGGAAAGGACGCATTTTATATGCTTCCACATGTTGGGTGCCAGCATAA
Protein sequence

>MsG0480021019.01.T01

MDPNFPQASDFTNGYYHFGEEGSTVVSEFDPNQYDSFLDADPNEYDSFLEADPNQYDSFLGADPLGFAATTFPIEGYMASATDPSLEDTDFSDTGKFINQILMEENVDQRPFYDPLSLQMTEKSFYDALLHTNKPRSPNQHPLDIHNSDGTTSSNSNSNSSVEDSRELKPLSPDTAVSDHVNHVFQFNSPAISQLHSTGVSDGLRDLDSSITQMAQNIFSDVDSVSLFKKSLEEGNKFLPPQPQLLTGFESSTLDMVREEENPFVLKGRKNHKREESFSQEQEEEAWRSSKQSAISAIDEDELSEMFDKVLLDVGHLPLCNENDSLQNGQVKTEESPPSNGGKTRRKKQGKKNETIDLRNLLLMCSQSVYANDNRNANELLKQIRQHSSPSGDGPQRLAHYFANGLEARLVGDGTGAQTFHSSPNTKRISTAEFLKAYQVHLSTSPFKKFAYFFANKMIMKASANAETLHIIDFGILYGFQWPILIKFLSDREGGPPNLKITGIEFPLPGFRPMERIEETGRRLADYCKRFHVPFEFNAIPSRYWETIRVEDLKIKSNEVVVVNSLMRFKNLLDESIEANSPRNAVLHLIRKINPAIFVQSIVNGSYNSPFFATRFREALFHFSALYDMFDTVIPRENKYRMLMERESIGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLNSELMDKFRTKLQQCYHKDFVFDVDNNWMLQGWKGRILYASTCWVPA*