Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003240.01.T01 | XP_003590328.1 | 99.346 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003240.01.T01 | Q9ZSD4 | 72.587 | 259 | 71 | 0 | 27 | 285 | 30 | 288 | 6.12E-140 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003240.01.T01 | B7FI20 | 99.346 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 0.0 | 625 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180003240.01 | 0.869092 | 4.009564e-66 | 1.485764e-62 |
| MsG0080048301.01 | MsG0180003240.01 | 0.806789 | 6.934408e-50 | 3.797852e-47 |
| MsG0080048345.01 | MsG0180003240.01 | 0.851519 | 8.416417e-61 | 1.707948e-57 |
| MsG0080048347.01 | MsG0180003240.01 | 0.874523 | 6.319669e-68 | 2.853537e-64 |
| MsG0080048348.01 | MsG0180003240.01 | 0.822099 | 2.839739e-53 | 2.353792e-50 |
| MsG0080048349.01 | MsG0180003240.01 | 0.833601 | 4.856242e-56 | 5.619942e-53 |
| MsG0080048350.01 | MsG0180003240.01 | 0.828966 | 6.701990e-55 | 6.764181e-52 |
| MsG0080048352.01 | MsG0180003240.01 | 0.875722 | 2.463320e-68 | 1.162494e-64 |
| MsG0080048967.01 | MsG0180003240.01 | 0.838585 | 2.635199e-57 | 3.545633e-54 |
| MsG0180000234.01 | MsG0180003240.01 | 0.843234 | 1.588172e-58 | 2.468818e-55 |
| MsG0180000437.01 | MsG0180003240.01 | 0.820614 | 6.250905e-53 | 4.969818e-50 |
| MsG0180000930.01 | MsG0180003240.01 | 0.845268 | 4.514434e-59 | 7.482753e-56 |
| MsG0180001050.01 | MsG0180003240.01 | 0.878837 | 2.032838e-69 | 1.077113e-65 |
| MsG0180003240.01 | MsG0180003248.01 | 0.831144 | 1.971981e-55 | 2.121284e-52 |
| MsG0180003240.01 | MsG0180003249.01 | 0.804664 | 1.938026e-49 | 1.005098e-46 |
| MsG0180003240.01 | MsG0180003250.01 | 0.819271 | 1.267497e-52 | 9.708299e-50 |
| MsG0180003240.01 | MsG0180004203.01 | 0.905561 | 3.769615e-80 | 6.131499e-76 |
| MsG0180003240.01 | MsG0180004296.01 | 0.817164 | 3.800229e-52 | 2.746835e-49 |
| MsG0180003240.01 | MsG0180004328.01 | 0.861212 | 1.202604e-63 | 3.376504e-60 |
| MsG0180003240.01 | MsG0180004393.01 | 0.804500 | 2.097013e-49 | 1.082897e-46 |
| MsG0180003240.01 | MsG0180004562.01 | 0.849921 | 2.371056e-60 | 4.566742e-57 |
| MsG0180003240.01 | MsG0180005356.01 | 0.877372 | 6.625859e-69 | 3.323943e-65 |
| MsG0180003240.01 | MsG0180005357.01 | 0.869854 | 2.266399e-66 | 8.632415e-63 |
| MsG0180003240.01 | MsG0180005358.01 | 0.863025 | 3.341042e-64 | 9.984359e-61 |
| MsG0180003240.01 | MsG0180005648.01 | 0.853188 | 2.818725e-61 | 6.039665e-58 |
| MsG0180003240.01 | MsG0280006442.01 | 0.829899 | 3.975785e-55 | 4.124502e-52 |
| MsG0180003240.01 | MsG0280007216.01 | 0.819098 | 1.388176e-52 | 1.058213e-49 |
| MsG0180003240.01 | MsG0280007759.01 | 0.810085 | 1.373575e-50 | 8.203138e-48 |
| MsG0180003240.01 | MsG0280008117.01 | 0.851546 | 8.269692e-61 | 1.679692e-57 |
| MsG0180003240.01 | MsG0280008405.01 | 0.834620 | 2.697625e-56 | 3.218758e-53 |
| MsG0180003240.01 | MsG0280008601.01 | 0.842559 | 2.400870e-58 | 3.654248e-55 |
| MsG0180003240.01 | MsG0280008747.01 | 0.824495 | 7.824922e-54 | 6.942288e-51 |
| MsG0180003240.01 | MsG0280009394.01 | 0.802096 | 6.597213e-49 | 3.203614e-46 |
| MsG0180003240.01 | MsG0280010415.01 | 0.810537 | 1.097452e-50 | 6.632523e-48 |
| MsG0180003240.01 | MsG0280010802.01 | 0.847158 | 1.380538e-59 | 2.432005e-56 |
| MsG0180003240.01 | MsG0280011041.01 | 0.843214 | 1.607943e-58 | 2.497884e-55 |
| MsG0180003240.01 | MsG0280011042.01 | 0.869465 | 3.033315e-66 | 1.139645e-62 |
| MsG0180003240.01 | MsG0280011053.01 | 0.807425 | 5.087884e-50 | 2.832907e-47 |
| MsG0180003240.01 | MsG0280011165.01 | 0.813334 | 2.697829e-51 | 1.756823e-48 |
| MsG0180003240.01 | MsG0280011193.01 | 0.800986 | 1.113988e-48 | 5.260132e-46 |
| MsG0180003240.01 | MsG0280011349.01 | 0.861601 | 9.149873e-64 | 2.603402e-60 |
| MsG0180003240.01 | MsG0280011350.01 | 0.818064 | 2.382127e-52 | 1.764754e-49 |
| MsG0180003240.01 | MsG0380011613.01 | 0.914603 | 1.578861e-84 | 3.955603e-80 |
| MsG0180003240.01 | MsG0380011638.01 | 0.806844 | 6.753302e-50 | 3.704001e-47 |
| MsG0180003240.01 | MsG0380011975.01 | 0.804773 | 1.838683e-49 | 9.562969e-47 |
| MsG0180003240.01 | MsG0380012654.01 | 0.836840 | 7.393385e-57 | 9.430262e-54 |
| MsG0180003240.01 | MsG0380013278.01 | 0.805586 | 1.242969e-49 | 6.601013e-47 |
| MsG0180003240.01 | MsG0380013300.01 | 0.867497 | 1.309915e-65 | 4.583086e-62 |
| MsG0180003240.01 | MsG0380013449.01 | 0.860628 | 1.809672e-63 | 4.978753e-60 |
| MsG0180003240.01 | MsG0380013452.01 | 0.877796 | 4.712075e-69 | 2.400929e-65 |
| MsG0180003240.01 | MsG0380013458.01 | 0.859404 | 4.233018e-63 | 1.116807e-59 |
| MsG0180003240.01 | MsG0380014920.01 | 0.802332 | 5.899329e-49 | 2.882100e-46 |
| MsG0180003240.01 | MsG0380015459.01 | 0.820107 | 8.169363e-53 | 6.405918e-50 |
| MsG0180003240.01 | MsG0380015489.01 | 0.818788 | 1.632766e-52 | 1.234048e-49 |
| MsG0180003240.01 | MsG0380016020.01 | 0.872429 | 3.201171e-67 | 1.339293e-63 |
| MsG0180003240.01 | MsG0380016086.01 | 0.815502 | 8.945615e-52 | 6.178697e-49 |
| MsG0180003240.01 | MsG0380016839.01 | 0.805350 | 1.393016e-49 | 7.353032e-47 |
| MsG0180003240.01 | MsG0380017122.01 | 0.862306 | 5.562480e-64 | 1.621463e-60 |
| MsG0180003240.01 | MsG0380017151.01 | 0.866398 | 2.936558e-65 | 9.883179e-62 |
| MsG0180003240.01 | MsG0380017386.01 | 0.862601 | 4.515669e-64 | 1.329889e-60 |
| MsG0180003240.01 | MsG0380017690.01 | 0.863319 | 2.710178e-64 | 8.182283e-61 |
| MsG0180003240.01 | MsG0380017754.01 | 0.847369 | 1.208175e-59 | 2.142679e-56 |
| MsG0180003240.01 | MsG0380017766.01 | 0.823526 | 1.320883e-53 | 1.140156e-50 |
| MsG0180003240.01 | MsG0380018026.01 | 0.800585 | 1.345051e-48 | 6.286326e-46 |
| MsG0180003240.01 | MsG0480018768.01 | 0.871179 | 8.322990e-67 | 3.325496e-63 |
| MsG0180003240.01 | MsG0480018807.01 | 0.869064 | 4.094789e-66 | 1.515725e-62 |
| MsG0180003240.01 | MsG0480019105.01 | 0.840608 | 7.847103e-58 | 1.123643e-54 |
| MsG0180003240.01 | MsG0480019894.01 | 0.836660 | 8.216642e-57 | 1.042285e-53 |
| MsG0180003240.01 | MsG0480020219.01 | 0.800789 | 1.222126e-48 | 5.741200e-46 |
| MsG0180003240.01 | MsG0480020497.01 | 0.848400 | 6.279030e-60 | 1.150895e-56 |
| MsG0180003240.01 | MsG0480020857.01 | 0.811575 | 6.536602e-51 | 4.060833e-48 |
| MsG0180003240.01 | MsG0480021019.01 | 0.805108 | 1.565278e-49 | 8.211198e-47 |
| MsG0180003240.01 | MsG0480021131.01 | 0.800511 | 1.392471e-48 | 6.495720e-46 |
| MsG0180003240.01 | MsG0480021135.01 | 0.818319 | 2.086185e-52 | 1.556446e-49 |
| MsG0180003240.01 | MsG0480021697.01 | 0.857843 | 1.238241e-62 | 3.097996e-59 |
| MsG0180003240.01 | MsG0480022125.01 | 0.823881 | 1.090801e-53 | 9.511120e-51 |
| MsG0180003240.01 | MsG0480022309.01 | 0.850777 | 1.363480e-60 | 2.700557e-57 |
| MsG0180003240.01 | MsG0480022310.01 | 0.827922 | 1.197257e-54 | 1.172213e-51 |
| MsG0180003240.01 | MsG0480022351.01 | 0.806394 | 8.404422e-50 | 4.556393e-47 |
| MsG0180003240.01 | MsG0480022515.01 | 0.822412 | 2.402575e-53 | 2.009550e-50 |
| MsG0180003240.01 | MsG0480022638.01 | 0.828656 | 7.964839e-55 | 7.967059e-52 |
| MsG0180003240.01 | MsG0480022680.01 | 0.839555 | 1.477605e-57 | 2.047647e-54 |
| MsG0180003240.01 | MsG0480022735.01 | 0.805901 | 1.066991e-49 | 5.712624e-47 |
| MsG0180003240.01 | MsG0480022736.01 | 0.847264 | 1.290940e-59 | 2.281717e-56 |
| MsG0180003240.01 | MsG0480023102.01 | 0.801920 | 7.169883e-49 | 3.466066e-46 |
| MsG0180003240.01 | MsG0480023107.01 | 0.813240 | 2.829579e-51 | 1.837737e-48 |
| MsG0180003240.01 | MsG0480023252.01 | 0.862889 | 3.679721e-64 | 1.094805e-60 |
| MsG0180003240.01 | MsG0480023286.01 | 0.863258 | 2.829877e-64 | 8.525794e-61 |
| MsG0180003240.01 | MsG0480023349.01 | 0.902445 | 9.625134e-79 | 1.363272e-74 |
| MsG0180003240.01 | MsG0480023819.01 | 0.806628 | 7.500451e-50 | 4.090579e-47 |
| MsG0180003240.01 | MsG0480023921.01 | 0.826175 | 3.133446e-54 | 2.916751e-51 |
| MsG0180003240.01 | MsG0580024218.01 | 0.812174 | 4.841738e-51 | 3.056655e-48 |
| MsG0180003240.01 | MsG0580024408.01 | 0.845174 | 4.786439e-59 | 7.909039e-56 |
| MsG0180003240.01 | MsG0580024415.01 | 0.805234 | 1.472826e-49 | 7.751337e-47 |
| MsG0180003240.01 | MsG0580024990.01 | 0.828460 | 8.879141e-55 | 8.831601e-52 |
| MsG0180003240.01 | MsG0580025095.01 | 0.823211 | 1.564747e-53 | 1.338680e-50 |
| MsG0180003240.01 | MsG0580025180.01 | 0.823985 | 1.031141e-53 | 9.016642e-51 |
| MsG0180003240.01 | MsG0580025683.01 | 0.877449 | 6.230537e-69 | 3.134321e-65 |
| MsG0180003240.01 | MsG0580025870.01 | 0.833566 | 4.953800e-56 | 5.726807e-53 |
| MsG0180003240.01 | MsG0580025876.01 | 0.853255 | 2.697274e-61 | 5.792523e-58 |
| MsG0180003240.01 | MsG0580027073.01 | 0.834456 | 2.965931e-56 | 3.521897e-53 |
| MsG0180003240.01 | MsG0580027227.01 | 0.843767 | 1.144513e-58 | 1.809174e-55 |
| MsG0180003240.01 | MsG0580027646.01 | 0.820371 | 7.105301e-53 | 5.611800e-50 |
| MsG0180003240.01 | MsG0580028560.01 | 0.806306 | 8.771816e-50 | 4.745019e-47 |
| MsG0180003240.01 | MsG0580028999.01 | 0.816292 | 5.963209e-52 | 4.208843e-49 |
| MsG0180003240.01 | MsG0580029555.01 | 0.900018 | 1.113800e-77 | 1.413067e-73 |
| MsG0180003240.01 | MsG0580029626.01 | 0.869466 | 3.031587e-66 | 1.139040e-62 |
| MsG0180003240.01 | MsG0580030133.01 | 0.858110 | 1.031179e-62 | 2.602989e-59 |
| MsG0180003240.01 | MsG0580030135.01 | 0.835531 | 1.589282e-56 | 1.948810e-53 |
| MsG0180003240.01 | MsG0680030336.01 | 0.826569 | 2.524503e-54 | 2.376315e-51 |
| MsG0180003240.01 | MsG0680030559.01 | 0.805352 | 1.391663e-49 | 7.346240e-47 |
| MsG0180003240.01 | MsG0680031429.01 | 0.869456 | 3.055950e-66 | 1.147800e-62 |
| MsG0180003240.01 | MsG0680032944.01 | 0.803652 | 3.147885e-49 | 1.590551e-46 |
| MsG0180003240.01 | MsG0680034919.01 | 0.811212 | 7.838023e-51 | 4.823022e-48 |
| MsG0180003240.01 | MsG0680035496.01 | 0.845282 | 4.475051e-59 | 7.420678e-56 |
| MsG0180003240.01 | MsG0680035841.01 | 0.829375 | 5.330805e-55 | 5.446521e-52 |
| MsG0180003240.01 | MsG0780036661.01 | 0.829470 | 5.057570e-55 | 5.180950e-52 |
| MsG0180003240.01 | MsG0780036946.01 | 0.815095 | 1.101643e-51 | 7.523844e-49 |
| MsG0180003240.01 | MsG0780036959.01 | 0.822066 | 2.889469e-53 | 2.392745e-50 |
| MsG0180003240.01 | MsG0780037943.01 | 0.829157 | 6.023979e-55 | 6.114784e-52 |
| MsG0180003240.01 | MsG0780038545.01 | 0.804686 | 1.917629e-49 | 9.950944e-47 |
| MsG0180003240.01 | MsG0780038622.01 | 0.827528 | 1.488805e-54 | 1.440993e-51 |
| MsG0180003240.01 | MsG0780038625.01 | 0.818419 | 1.979275e-52 | 1.480925e-49 |
| MsG0180003240.01 | MsG0780038939.01 | 0.813621 | 2.333331e-51 | 1.531364e-48 |
| MsG0180003240.01 | MsG0780039190.01 | 0.822492 | 2.301194e-53 | 1.929083e-50 |
| MsG0180003240.01 | MsG0780039334.01 | 0.909008 | 9.150823e-82 | 1.744869e-77 |
| MsG0180003240.01 | MsG0780039576.01 | 0.841124 | 5.746616e-58 | 8.361011e-55 |
| MsG0180003240.01 | MsG0780039665.01 | 0.817163 | 3.801841e-52 | 2.747936e-49 |
| MsG0180003240.01 | MsG0780039968.01 | 0.912059 | 3.005005e-83 | 6.630161e-79 |
| MsG0180003240.01 | MsG0780040181.01 | 0.840693 | 7.457445e-58 | 1.070718e-54 |
| MsG0180003240.01 | MsG0780040480.01 | 0.822735 | 2.020594e-53 | 1.705688e-50 |
| MsG0180003240.01 | MsG0780041133.01 | 0.826374 | 2.810037e-54 | 2.630598e-51 |
| MsG0180003240.01 | MsG0780041177.01 | 0.808063 | 3.723673e-50 | 2.108135e-47 |
| MsG0180003240.01 | MsG0780041299.01 | 0.844704 | 6.411983e-59 | 1.043822e-55 |
| MsG0180003240.01 | MsG0780041316.01 | 0.820919 | 5.318360e-53 | 4.264858e-50 |
| MsG0180003240.01 | MsG0780041556.01 | 0.862769 | 4.007113e-64 | 1.187276e-60 |
| MsG0180003240.01 | MsG0780041574.01 | 0.879362 | 1.326168e-69 | 7.169506e-66 |
| MsG0180003240.01 | MsG0880042740.01 | 0.840844 | 6.807804e-58 | 9.820429e-55 |
| MsG0180003240.01 | MsG0880042810.01 | 0.835964 | 1.234993e-56 | 1.534173e-53 |
| MsG0180003240.01 | MsG0880043588.01 | 0.800318 | 1.524527e-48 | 7.077261e-46 |
| MsG0180003240.01 | MsG0880043824.01 | 0.820865 | 5.473333e-53 | 4.382645e-50 |
| MsG0180003240.01 | MsG0880043828.01 | 0.816110 | 6.546669e-52 | 4.597463e-49 |
| MsG0180003240.01 | MsG0880044669.01 | 0.852360 | 4.858655e-61 | 1.012705e-57 |
| MsG0180003240.01 | MsG0880045677.01 | 0.836133 | 1.118669e-56 | 1.396957e-53 |
| MsG0180003240.01 | MsG0880046429.01 | 0.859361 | 4.362432e-63 | 1.149198e-59 |
| MsG0180003240.01 | MsG0880046996.01 | 0.833968 | 3.930676e-56 | 4.599723e-53 |
| MsG0180003240.01 | MsG0880047256.01 | 0.816331 | 5.844183e-52 | 4.129151e-49 |
| MsG0180003240.01 | MsG0880047486.01 | 0.818146 | 2.282177e-52 | 1.694570e-49 |
| MsG0180003240.01 | MsG0880047665.01 | 0.858298 | 9.070973e-63 | 2.304472e-59 |
| MsG0180003240.01 | MsG0880047747.01 | 0.883213 | 5.426361e-71 | 3.408818e-67 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003240.01.T01 | MTR_1g056550 | 99.346 | 306 | 2 | 0 | 1 | 306 | 1 | 306 | 0.0 | 625 |
| MsG0180003240.01.T01 | MTR_7g106420 | 69.686 | 287 | 74 | 2 | 1 | 287 | 1 | 274 | 5.49e-145 | 410 |
| MsG0180003240.01.T01 | MTR_1g056560 | 66.212 | 293 | 91 | 3 | 1 | 287 | 1 | 291 | 4.80e-140 | 399 |
| MsG0180003240.01.T01 | MTR_2g012270 | 55.082 | 305 | 127 | 2 | 1 | 304 | 1 | 296 | 3.52e-128 | 367 |
| MsG0180003240.01.T01 | MTR_4g090900 | 59.028 | 288 | 109 | 3 | 1 | 287 | 1 | 280 | 1.33e-122 | 353 |
| MsG0180003240.01.T01 | MTR_5g012010 | 43.581 | 296 | 156 | 3 | 1 | 285 | 1 | 296 | 1.66e-86 | 262 |
| MsG0180003240.01.T01 | MTR_6g028140 | 44.637 | 289 | 149 | 3 | 1 | 287 | 1 | 280 | 3.68e-80 | 245 |
| MsG0180003240.01.T01 | MTR_2g088700 | 42.434 | 304 | 171 | 2 | 1 | 303 | 1 | 301 | 1.16e-78 | 242 |
| MsG0180003240.01.T01 | MTR_2g088700 | 42.308 | 286 | 161 | 2 | 1 | 285 | 1 | 283 | 3.13e-73 | 228 |
| MsG0180003240.01.T01 | MTR_5g020670 | 40.000 | 285 | 159 | 4 | 1 | 283 | 1 | 275 | 3.20e-62 | 199 |
| MsG0180003240.01.T01 | MTR_8g073900 | 31.361 | 169 | 92 | 3 | 1 | 168 | 1 | 146 | 4.24e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003240.01.T01 | AT3G11820 | 72.587 | 259 | 71 | 0 | 27 | 285 | 30 | 288 | 6.24e-141 | 401 |
| MsG0180003240.01.T01 | AT3G11820 | 73.152 | 257 | 69 | 0 | 29 | 285 | 1 | 257 | 1.23e-140 | 399 |
| MsG0180003240.01.T01 | AT1G61290 | 55.814 | 301 | 125 | 1 | 1 | 301 | 1 | 293 | 4.05e-126 | 362 |
| MsG0180003240.01.T01 | AT1G61290 | 55.814 | 301 | 125 | 1 | 1 | 301 | 1 | 293 | 4.05e-126 | 362 |
| MsG0180003240.01.T01 | AT1G11250 | 57.491 | 287 | 109 | 1 | 1 | 287 | 1 | 274 | 3.23e-122 | 352 |
| MsG0180003240.01.T01 | AT3G52400 | 62.199 | 291 | 104 | 3 | 1 | 287 | 1 | 289 | 2.58e-120 | 349 |
| MsG0180003240.01.T01 | AT4G03330 | 53.268 | 306 | 134 | 2 | 1 | 304 | 1 | 299 | 3.01e-111 | 325 |
| MsG0180003240.01.T01 | AT3G03800 | 44.948 | 287 | 148 | 4 | 1 | 285 | 1 | 279 | 2.16e-79 | 243 |
| MsG0180003240.01.T01 | AT3G03800 | 44.948 | 287 | 148 | 4 | 1 | 285 | 1 | 279 | 2.16e-79 | 243 |
| MsG0180003240.01.T01 | AT1G08560 | 43.003 | 293 | 152 | 5 | 1 | 285 | 1 | 286 | 4.57e-78 | 240 |
| MsG0180003240.01.T01 | AT5G08080 | 46.316 | 285 | 146 | 2 | 1 | 285 | 1 | 278 | 1.35e-72 | 226 |
| MsG0180003240.01.T01 | AT5G08080 | 46.316 | 285 | 146 | 2 | 1 | 285 | 1 | 278 | 1.35e-72 | 226 |
| MsG0180003240.01.T01 | AT5G08080 | 44.595 | 296 | 146 | 4 | 1 | 285 | 1 | 289 | 1.16e-70 | 221 |
| MsG0180003240.01.T01 | AT2G18260 | 35.606 | 264 | 163 | 2 | 40 | 303 | 46 | 302 | 3.14e-57 | 187 |
| MsG0180003240.01.T01 | AT2G18260 | 35.606 | 264 | 163 | 2 | 40 | 303 | 46 | 302 | 3.14e-57 | 187 |
| MsG0180003240.01.T01 | AT5G08080 | 42.995 | 207 | 111 | 2 | 1 | 207 | 1 | 200 | 4.02e-38 | 135 |
| MsG0180003240.01.T01 | AT5G08080 | 42.995 | 207 | 111 | 2 | 1 | 207 | 1 | 200 | 4.02e-38 | 135 |
Find 75 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCCTCTCTTGAATTTCT+TGG | 0.088352 | 1:+58931201 | None:intergenic |
| GGAGCTTCACCAAGTGTTTA+TGG | 0.187321 | 1:-58931147 | MsG0180003240.01.T01:CDS |
| AGCCACGTCAGCATCCATTT+TGG | 0.265957 | 1:+58932417 | None:intergenic |
| TGTTTGCTCTTCCTTGTTGC+TGG | 0.276634 | 1:+58931237 | None:intergenic |
| CAGAGGATATTTGTTGTCTA+AGG | 0.290767 | 1:+58932218 | None:intergenic |
| TCCACTTTCTGCTATTCATT+TGG | 0.309384 | 1:+58931006 | None:intergenic |
| GAAAGATATTCGCTCCAAAA+TGG | 0.314196 | 1:-58932431 | MsG0180003240.01.T01:CDS |
| GTTTATGGACATGTCTGTTT+TGG | 0.324253 | 1:-58931132 | MsG0180003240.01.T01:CDS |
| TCCTCTCATGGGAGACTCTA+AGG | 0.337274 | 1:+58932482 | None:intergenic |
| AATATGAATGATTTATTCTC+TGG | 0.376169 | 1:-58932676 | MsG0180003240.01.T01:CDS |
| TGGTTTGAGGAAGAAGCTTA+AGG | 0.379675 | 1:-58932263 | MsG0180003240.01.T01:CDS |
| ACACCAGTTTGTGCGGTATT+CGG | 0.383825 | 1:+58932580 | None:intergenic |
| TTTCTCTCGGTTCCGTAACT+CGG | 0.405483 | 1:-58932650 | MsG0180003240.01.T01:CDS |
| CACTGGACCGGGTTCGTCCT+CGG | 0.407499 | 1:-58932311 | MsG0180003240.01.T01:CDS |
| GAAGGGTCTTGCTCCTCTCA+TGG | 0.411456 | 1:+58932470 | None:intergenic |
| TCAATCACAAGGTGAACAAT+TGG | 0.420883 | 1:-58931108 | MsG0180003240.01.T01:CDS |
| CAAACTCCTACTAGCCTCAT+TGG | 0.425618 | 1:+58932339 | None:intergenic |
| AGTAGGAGTTTGCCTGGCAC+TGG | 0.429966 | 1:-58932328 | MsG0180003240.01.T01:CDS |
| TCACAGCTTTCGCGCTGTGA+AGG | 0.430417 | 1:+58932452 | None:intergenic |
| CACAGCTTTCGCGCTGTGAA+GGG | 0.436831 | 1:+58932453 | None:intergenic |
| GAGTTTGCCTGGCACTGGAC+CGG | 0.438012 | 1:-58932323 | MsG0180003240.01.T01:CDS |
| GACGAACCCGGTCCAGTGCC+AGG | 0.441064 | 1:+58932316 | None:intergenic |
| ATCACATGGTGGTGGTTGTC+CGG | 0.452462 | 1:+58932616 | None:intergenic |
| TATTCTCTGGCTCTTTCTCT+CGG | 0.459600 | 1:-58932663 | MsG0180003240.01.T01:CDS |
| TCGCCGAATACCGCACAAAC+TGG | 0.464585 | 1:-58932583 | MsG0180003240.01.T01:CDS |
| AGTTTGCCTGGCACTGGACC+GGG | 0.494865 | 1:-58932322 | MsG0180003240.01.T01:CDS |
| CGTAGATACTATACTGTCAC+TGG | 0.499164 | 1:-58932175 | MsG0180003240.01.T01:CDS |
| AAGGGTCTTGCTCCTCTCAT+GGG | 0.499489 | 1:+58932471 | None:intergenic |
| TCCTACTAGCCTCATTGGAC+CGG | 0.514248 | 1:+58932344 | None:intergenic |
| CGTGCTAATTCGTATGTAAG+AGG | 0.516664 | 1:-58931062 | MsG0180003240.01.T01:CDS |
| CTCCAAAATGGATGCTGACG+TGG | 0.519276 | 1:-58932419 | MsG0180003240.01.T01:CDS |
| GTCCGGTCCGAGGACGAACC+CGG | 0.520586 | 1:+58932304 | None:intergenic |
| GACCGGGTTCGTCCTCGGAC+CGG | 0.520941 | 1:-58932306 | MsG0180003240.01.T01:CDS |
| TCCTAGCAACATGCAACTGT+TGG | 0.522312 | 1:+58931033 | None:intergenic |
| GAGGCTAGTAGGAGTTTGCC+TGG | 0.523433 | 1:-58932334 | MsG0180003240.01.T01:CDS |
| ACCGGTCCAATGAGGCTAGT+AGG | 0.527254 | 1:-58932345 | MsG0180003240.01.T01:CDS |
| TACAGTTTCTCTATATTCAG+AGG | 0.527444 | 1:+58932201 | None:intergenic |
| GAAGAAGCTTAAGGATTCCA+TGG | 0.529595 | 1:-58932254 | MsG0180003240.01.T01:CDS |
| GCGAAACTTGATCCGAGTTA+CGG | 0.530081 | 1:+58932638 | None:intergenic |
| AATAATGAGGAGAATTATGA+TGG | 0.530230 | 1:+58930974 | None:intergenic |
| ACCGGTCAAGTGCCTCGAGC+CGG | 0.535814 | 1:+58932362 | None:intergenic |
| AGAGATAGAGAGAAATCTCA+TGG | 0.536636 | 1:-58931168 | MsG0180003240.01.T01:CDS |
| CTAATTCGTATGTAAGAGGT+GGG | 0.546081 | 1:-58931058 | MsG0180003240.01.T01:CDS |
| TCCGGCTCGAGGCACTTGAC+CGG | 0.547953 | 1:-58932363 | MsG0180003240.01.T01:CDS |
| GTTGATCTCCTCATTTCCAC+TGG | 0.557952 | 1:-58932130 | MsG0180003240.01.T01:intron |
| TATACATACCAGTGGAAATG+AGG | 0.558156 | 1:+58932122 | None:intergenic |
| AAGGTTGTTAAAGCTATCCA+TGG | 0.560718 | 1:+58932237 | None:intergenic |
| ACCAAATGAATAGCAGAAAG+TGG | 0.561512 | 1:-58931007 | MsG0180003240.01.T01:CDS |
| ACAAGGAAGAGCAAACATCA+TGG | 0.570164 | 1:-58931231 | MsG0180003240.01.T01:CDS |
| AGAAGTCGAAGGTGTTAAAG+AGG | 0.570794 | 1:-58932536 | MsG0180003240.01.T01:CDS |
| CAGACATGTCCATAAACACT+TGG | 0.571715 | 1:+58931138 | None:intergenic |
| GCTAATTCGTATGTAAGAGG+TGG | 0.577773 | 1:-58931059 | MsG0180003240.01.T01:CDS |
| TCCAACAGTTGCATGTTGCT+AGG | 0.578150 | 1:-58931034 | MsG0180003240.01.T01:CDS |
| CATCTGTGGTGAGTGGTTTG+AGG | 0.587043 | 1:-58932276 | MsG0180003240.01.T01:CDS |
| TCACCACAGATGTTCTAGTC+CGG | 0.594304 | 1:+58932287 | None:intergenic |
| AAGCTAAACTTGTTAAACTC+CGG | 0.596720 | 1:-58932381 | MsG0180003240.01.T01:CDS |
| GCCTTAGAGTCTCCCATGAG+AGG | 0.597298 | 1:-58932483 | MsG0180003240.01.T01:CDS |
| ACATTTCGATCACATGGTGG+TGG | 0.613048 | 1:+58932608 | None:intergenic |
| AAATTCTTTGAAGAAGTCGA+AGG | 0.621972 | 1:-58932547 | MsG0180003240.01.T01:CDS |
| GCGATGACATTTCGATCACA+TGG | 0.624896 | 1:+58932602 | None:intergenic |
| AGGTGTTAAAGAGGAACTGA+AGG | 0.625874 | 1:-58932527 | MsG0180003240.01.T01:CDS |
| TAACTCGGATCAAGTTTCGC+CGG | 0.635043 | 1:-58932635 | MsG0180003240.01.T01:CDS |
| CTATGATCAAGATAATAATG+AGG | 0.639529 | 1:+58930961 | None:intergenic |
| ACGAATTAGCACGTGCCACG+TGG | 0.646541 | 1:+58931072 | None:intergenic |
| GGCACTTGACCGGTCCAATG+AGG | 0.650152 | 1:-58932353 | MsG0180003240.01.T01:CDS |
| CAATCCAAGAAATTCAAGAG+AGG | 0.658855 | 1:-58931205 | MsG0180003240.01.T01:CDS |
| AAGATGAACACCAGTTTGTG+CGG | 0.660335 | 1:+58932573 | None:intergenic |
| ACTTGTTAAACTCCGGCTCG+AGG | 0.660615 | 1:-58932374 | MsG0180003240.01.T01:CDS |
| ACTAGAACATCTGTGGTGAG+TGG | 0.667098 | 1:-58932283 | MsG0180003240.01.T01:CDS |
| AGTGGAAATGAGGAGATCAA+CGG | 0.679065 | 1:+58932132 | None:intergenic |
| GGACCGGACTAGAACATCTG+TGG | 0.682428 | 1:-58932290 | MsG0180003240.01.T01:CDS |
| AGATGTTCTAGTCCGGTCCG+AGG | 0.692794 | 1:+58932294 | None:intergenic |
| TAATTCGTATGTAAGAGGTG+GGG | 0.706870 | 1:-58931057 | MsG0180003240.01.T01:CDS |
| ATGACATTTCGATCACATGG+TGG | 0.719906 | 1:+58932605 | None:intergenic |
| GGATAATATTGAAAGCCACG+TGG | 0.768363 | 1:-58931087 | MsG0180003240.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACATATATAAGTATAT+TGG | + | Chr1:58932155-58932174 | None:intergenic | 10.0% |
| !! | TTAAATTTCATAAAGATTTA+TGG | + | Chr1:58931705-58931724 | None:intergenic | 10.0% |
| !! | AATAAAAAGAAACTTAAGTA+TGG | + | Chr1:58932123-58932142 | None:intergenic | 15.0% |
| !!! | ATACATTTTAATAATTCATG+TGG | - | Chr1:58931583-58931602 | MsG0180003240.01.T01:intron | 15.0% |
| !!! | TACTTGATTCATTTATTTTT+AGG | + | Chr1:58932081-58932100 | None:intergenic | 15.0% |
| !!! | TGTAGATTAATCTATTTTTA+AGG | - | Chr1:58931666-58931685 | MsG0180003240.01.T01:intron | 15.0% |
| !!! | AATGGTTTTAGATTCAAATT+CGG | + | Chr1:58932010-58932029 | None:intergenic | 20.0% |
| !!! | ATCTTAGTTAATTTTCTTTC+CGG | - | Chr1:58931862-58931881 | MsG0180003240.01.T01:intron | 20.0% |
| !!! | ATTTTAATAATTCATGTGGA+AGG | - | Chr1:58931587-58931606 | MsG0180003240.01.T01:intron | 20.0% |
| !!! | ATTTTTATTTCAGAATCGAA+AGG | + | Chr1:58931774-58931793 | None:intergenic | 20.0% |
| !!! | TTGAAGTGAAAGTTTTTAAT+AGG | - | Chr1:58932224-58932243 | MsG0180003240.01.T01:CDS | 20.0% |
| !!! | TTTTTATTTCAGAATCGAAA+GGG | + | Chr1:58931773-58931792 | None:intergenic | 20.0% |
| ! | AAAAAAGAAACCATATACTC+TGG | + | Chr1:58932188-58932207 | None:intergenic | 25.0% |
| ! | AACTTACACATACAACTAAA+TGG | + | Chr1:58932028-58932047 | None:intergenic | 25.0% |
| ! | AATAATGAGGAGAATTATGA+TGG | + | Chr1:58932637-58932656 | None:intergenic | 25.0% |
| ! | CTATGATCAAGATAATAATG+AGG | + | Chr1:58932650-58932669 | None:intergenic | 25.0% |
| ! | TGTATAAAATCCAGAGTATA+TGG | - | Chr1:58932175-58932194 | MsG0180003240.01.T01:CDS | 25.0% |
| !! | AAGTGAAAGTTTTTAATAGG+AGG | - | Chr1:58932227-58932246 | MsG0180003240.01.T01:CDS | 25.0% |
| !! | ACATCTTTTTAATGTACCAT+AGG | - | Chr1:58932318-58932337 | MsG0180003240.01.T01:CDS | 25.0% |
| !! | GTGATAATGTTGATATTGTT+AGG | - | Chr1:58931970-58931989 | MsG0180003240.01.T01:intron | 25.0% |
| AAAAACCCAAAGTTGTATGA+AGG | + | Chr1:58931838-58931857 | None:intergenic | 30.0% | |
| AAATGTTTCACTTTCACCTA+TGG | + | Chr1:58932337-58932356 | None:intergenic | 30.0% | |
| ATGTACCTTCATACAACTTT+GGG | - | Chr1:58931830-58931849 | MsG0180003240.01.T01:intron | 30.0% | |
| TAATGTTGATATTGTTAGGC+TGG | - | Chr1:58931974-58931993 | MsG0180003240.01.T01:intron | 30.0% | |
| TACAGTTTCTCTATATTCAG+AGG | + | Chr1:58931410-58931429 | None:intergenic | 30.0% | |
| TCAAACAGAGTAATTTGATC+CGG | + | Chr1:58931884-58931903 | None:intergenic | 30.0% | |
| TGATGATATATACATACCAG+TGG | + | Chr1:58931497-58931516 | None:intergenic | 30.0% | |
| TTAGATTCAAATTCGGTTGA+AGG | + | Chr1:58932003-58932022 | None:intergenic | 30.0% | |
| TTGTATGTGTAAGTTTCAGA+TGG | - | Chr1:58932033-58932052 | MsG0180003240.01.T01:intron | 30.0% | |
| ! | AAATTCTTTGAAGAAGTCGA+AGG | - | Chr1:58931061-58931080 | MsG0180003240.01.T01:CDS | 30.0% |
| ! | TGAAAGTTTTTAATAGGAGG+TGG | - | Chr1:58932230-58932249 | MsG0180003240.01.T01:CDS | 30.0% |
| !! | AAGCTAAACTTGTTAAACTC+CGG | - | Chr1:58931227-58931246 | MsG0180003240.01.T01:CDS | 30.0% |
| AAGGTTGTTAAAGCTATCCA+TGG | + | Chr1:58931374-58931393 | None:intergenic | 35.0% | |
| ACCAAATGAATAGCAGAAAG+TGG | - | Chr1:58932601-58932620 | MsG0180003240.01.T01:CDS | 35.0% | |
| AGAGATAGAGAGAAATCTCA+TGG | - | Chr1:58932440-58932459 | MsG0180003240.01.T01:CDS | 35.0% | |
| ATCACTTGAGCTGAATCTTA+TGG | + | Chr1:58931955-58931974 | None:intergenic | 35.0% | |
| CAATCCAAGAAATTCAAGAG+AGG | - | Chr1:58932403-58932422 | MsG0180003240.01.T01:CDS | 35.0% | |
| CATGTACCTTCATACAACTT+TGG | - | Chr1:58931829-58931848 | MsG0180003240.01.T01:intron | 35.0% | |
| CTAATTCGTATGTAAGAGGT+GGG | - | Chr1:58932550-58932569 | MsG0180003240.01.T01:CDS | 35.0% | |
| GAAAGATATTCGCTCCAAAA+TGG | - | Chr1:58931177-58931196 | MsG0180003240.01.T01:CDS | 35.0% | |
| TAATTCGTATGTAAGAGGTG+GGG | - | Chr1:58932551-58932570 | MsG0180003240.01.T01:CDS | 35.0% | |
| TATACATACCAGTGGAAATG+AGG | + | Chr1:58931489-58931508 | None:intergenic | 35.0% | |
| TCAATCACAAGGTGAACAAT+TGG | - | Chr1:58932500-58932519 | MsG0180003240.01.T01:CDS | 35.0% | |
| TCCACTTTCTGCTATTCATT+TGG | + | Chr1:58932605-58932624 | None:intergenic | 35.0% | |
| TGAAAAGGAAAGAGAAGAGA+GGG | - | Chr1:58931614-58931633 | MsG0180003240.01.T01:intron | 35.0% | |
| TTGAAAAGGAAAGAGAAGAG+AGG | - | Chr1:58931613-58931632 | MsG0180003240.01.T01:intron | 35.0% | |
| ! | CAAAGTTGTATGAAGGTACA+TGG | + | Chr1:58931831-58931850 | None:intergenic | 35.0% |
| ! | GTTTATGGACATGTCTGTTT+TGG | - | Chr1:58932476-58932495 | MsG0180003240.01.T01:CDS | 35.0% |
| !! | CAGAGGATATTTGTTGTCTA+AGG | + | Chr1:58931393-58931412 | None:intergenic | 35.0% |
| !! | CATGTGGAAGGATTTTGAAA+AGG | - | Chr1:58931599-58931618 | MsG0180003240.01.T01:intron | 35.0% |
| !! | TGAAGGTACATGGAGAATTT+TGG | + | Chr1:58931821-58931840 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGGTTCAATCACA+AGG | - | Chr1:58932489-58932508 | MsG0180003240.01.T01:CDS | 35.0% |
| AAGATGAACACCAGTTTGTG+CGG | + | Chr1:58931038-58931057 | None:intergenic | 40.0% | |
| ACAAGGAAGAGCAAACATCA+TGG | - | Chr1:58932377-58932396 | MsG0180003240.01.T01:CDS | 40.0% | |
| AGGTGTTAAAGAGGAACTGA+AGG | - | Chr1:58931081-58931100 | MsG0180003240.01.T01:CDS | 40.0% | |
| AGTGGAAATGAGGAGATCAA+CGG | + | Chr1:58931479-58931498 | None:intergenic | 40.0% | |
| ATGACATTTCGATCACATGG+TGG | + | Chr1:58931006-58931025 | None:intergenic | 40.0% | |
| CAAAAAGCAATCCAGCAACA+AGG | - | Chr1:58932360-58932379 | MsG0180003240.01.T01:CDS | 40.0% | |
| CAGACATGTCCATAAACACT+TGG | + | Chr1:58932473-58932492 | None:intergenic | 40.0% | |
| CATGCCTCTCTTGAATTTCT+TGG | + | Chr1:58932410-58932429 | None:intergenic | 40.0% | |
| CGTAGATACTATACTGTCAC+TGG | - | Chr1:58931433-58931452 | MsG0180003240.01.T01:intron | 40.0% | |
| CGTGCTAATTCGTATGTAAG+AGG | - | Chr1:58932546-58932565 | MsG0180003240.01.T01:CDS | 40.0% | |
| GAAGAAGCTTAAGGATTCCA+TGG | - | Chr1:58931354-58931373 | MsG0180003240.01.T01:intron | 40.0% | |
| GCTAATTCGTATGTAAGAGG+TGG | - | Chr1:58932549-58932568 | MsG0180003240.01.T01:CDS | 40.0% | |
| GGATAATATTGAAAGCCACG+TGG | - | Chr1:58932521-58932540 | MsG0180003240.01.T01:CDS | 40.0% | |
| GGTGTTTACCACTTCGTTTA+CGG | - | Chr1:58932054-58932073 | MsG0180003240.01.T01:intron | 40.0% | |
| TGGTTTGAGGAAGAAGCTTA+AGG | - | Chr1:58931345-58931364 | MsG0180003240.01.T01:intron | 40.0% | |
| ! | AGGTACATGGAGAATTTTGG+AGG | + | Chr1:58931818-58931837 | None:intergenic | 40.0% |
| !! | AGAAGTCGAAGGTGTTAAAG+AGG | - | Chr1:58931072-58931091 | MsG0180003240.01.T01:CDS | 40.0% |
| !! | AGATCAACGGTTTTGTCATC+AGG | + | Chr1:58931466-58931485 | None:intergenic | 40.0% |
| !! | TATTCTCTGGCTCTTTCTCT+CGG | - | Chr1:58930945-58930964 | MsG0180003240.01.T01:CDS | 40.0% |
| !! | TTTTAGGTCCGTAAACGAAG+TGG | + | Chr1:58932065-58932084 | None:intergenic | 40.0% |
| ACACCAGTTTGTGCGGTATT+CGG | + | Chr1:58931031-58931050 | None:intergenic | 45.0% | |
| ACATTTCGATCACATGGTGG+TGG | + | Chr1:58931003-58931022 | None:intergenic | 45.0% | |
| ACTAGAACATCTGTGGTGAG+TGG | - | Chr1:58931325-58931344 | MsG0180003240.01.T01:intron | 45.0% | |
| GCGAAACTTGATCCGAGTTA+CGG | + | Chr1:58930973-58930992 | None:intergenic | 45.0% | |
| GCGATGACATTTCGATCACA+TGG | + | Chr1:58931009-58931028 | None:intergenic | 45.0% | |
| GGAGCTTCACCAAGTGTTTA+TGG | - | Chr1:58932461-58932480 | MsG0180003240.01.T01:CDS | 45.0% | |
| GTTGATCTCCTCATTTCCAC+TGG | - | Chr1:58931478-58931497 | MsG0180003240.01.T01:intron | 45.0% | |
| TAACTCGGATCAAGTTTCGC+CGG | - | Chr1:58930973-58930992 | MsG0180003240.01.T01:CDS | 45.0% | |
| TCACCACAGATGTTCTAGTC+CGG | + | Chr1:58931324-58931343 | None:intergenic | 45.0% | |
| TCCAACAGTTGCATGTTGCT+AGG | - | Chr1:58932574-58932593 | MsG0180003240.01.T01:CDS | 45.0% | |
| TCCTAGCAACATGCAACTGT+TGG | + | Chr1:58932578-58932597 | None:intergenic | 45.0% | |
| TGTTTGCTCTTCCTTGTTGC+TGG | + | Chr1:58932374-58932393 | None:intergenic | 45.0% | |
| TTTCTCTCGGTTCCGTAACT+CGG | - | Chr1:58930958-58930977 | MsG0180003240.01.T01:CDS | 45.0% | |
| ! | CAAACTCCTACTAGCCTCAT+TGG | + | Chr1:58931272-58931291 | None:intergenic | 45.0% |
| AAGGGTCTTGCTCCTCTCAT+GGG | + | Chr1:58931140-58931159 | None:intergenic | 50.0% | |
| CATCTGTGGTGAGTGGTTTG+AGG | - | Chr1:58931332-58931351 | MsG0180003240.01.T01:intron | 50.0% | |
| CTCCAAAATGGATGCTGACG+TGG | - | Chr1:58931189-58931208 | MsG0180003240.01.T01:CDS | 50.0% | |
| TCCTCTCATGGGAGACTCTA+AGG | + | Chr1:58931129-58931148 | None:intergenic | 50.0% | |
| ! | ACTTGTTAAACTCCGGCTCG+AGG | - | Chr1:58931234-58931253 | MsG0180003240.01.T01:CDS | 50.0% |
| ! | AGCCACGTCAGCATCCATTT+TGG | + | Chr1:58931194-58931213 | None:intergenic | 50.0% |
| ! | TCCTACTAGCCTCATTGGAC+CGG | + | Chr1:58931267-58931286 | None:intergenic | 50.0% |
| !! | ATCACATGGTGGTGGTTGTC+CGG | + | Chr1:58930995-58931014 | None:intergenic | 50.0% |
| ACCGGTCCAATGAGGCTAGT+AGG | - | Chr1:58931263-58931282 | MsG0180003240.01.T01:CDS | 55.0% | |
| ACGAATTAGCACGTGCCACG+TGG | + | Chr1:58932539-58932558 | None:intergenic | 55.0% | |
| AGATGTTCTAGTCCGGTCCG+AGG | + | Chr1:58931317-58931336 | None:intergenic | 55.0% | |
| AGTAGGAGTTTGCCTGGCAC+TGG | - | Chr1:58931280-58931299 | MsG0180003240.01.T01:intron | 55.0% | |
| CACAGCTTTCGCGCTGTGAA+GGG | + | Chr1:58931158-58931177 | None:intergenic | 55.0% | |
| GAAGGGTCTTGCTCCTCTCA+TGG | + | Chr1:58931141-58931160 | None:intergenic | 55.0% | |
| GAGGCTAGTAGGAGTTTGCC+TGG | - | Chr1:58931274-58931293 | MsG0180003240.01.T01:intron | 55.0% | |
| GCCTTAGAGTCTCCCATGAG+AGG | - | Chr1:58931125-58931144 | MsG0180003240.01.T01:CDS | 55.0% | |
| TCACAGCTTTCGCGCTGTGA+AGG | + | Chr1:58931159-58931178 | None:intergenic | 55.0% | |
| TCGCCGAATACCGCACAAAC+TGG | - | Chr1:58931025-58931044 | MsG0180003240.01.T01:CDS | 55.0% | |
| ! | GGACCGGACTAGAACATCTG+TGG | - | Chr1:58931318-58931337 | MsG0180003240.01.T01:intron | 55.0% |
| GGCACTTGACCGGTCCAATG+AGG | - | Chr1:58931255-58931274 | MsG0180003240.01.T01:CDS | 60.0% | |
| ! | AGTTTGCCTGGCACTGGACC+GGG | - | Chr1:58931286-58931305 | MsG0180003240.01.T01:intron | 60.0% |
| ! | GAGTTTGCCTGGCACTGGAC+CGG | - | Chr1:58931285-58931304 | MsG0180003240.01.T01:intron | 60.0% |
| ACCGGTCAAGTGCCTCGAGC+CGG | + | Chr1:58931249-58931268 | None:intergenic | 65.0% | |
| CACTGGACCGGGTTCGTCCT+CGG | - | Chr1:58931297-58931316 | MsG0180003240.01.T01:intron | 65.0% | |
| ! | TCCGGCTCGAGGCACTTGAC+CGG | - | Chr1:58931245-58931264 | MsG0180003240.01.T01:CDS | 65.0% |
| GACCGGGTTCGTCCTCGGAC+CGG | - | Chr1:58931302-58931321 | MsG0180003240.01.T01:intron | 70.0% | |
| GACGAACCCGGTCCAGTGCC+AGG | + | Chr1:58931295-58931314 | None:intergenic | 70.0% | |
| GTCCGGTCCGAGGACGAACC+CGG | + | Chr1:58931307-58931326 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 58930935 | 58932695 | 58930935 | ID=MsG0180003240.01;Name=MsG0180003240.01 |
| Chr1 | mRNA | 58930935 | 58932695 | 58930935 | ID=MsG0180003240.01.T01;Parent=MsG0180003240.01;Name=MsG0180003240.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|306 |
| Chr1 | exon | 58932131 | 58932695 | 58932131 | ID=MsG0180003240.01.T01:exon:49085;Parent=MsG0180003240.01.T01 |
| Chr1 | exon | 58930935 | 58931290 | 58930935 | ID=MsG0180003240.01.T01:exon:49084;Parent=MsG0180003240.01.T01 |
| Chr1 | CDS | 58932131 | 58932695 | 58932131 | ID=MsG0180003240.01.T01:cds;Parent=MsG0180003240.01.T01 |
| Chr1 | CDS | 58930935 | 58931290 | 58930935 | ID=MsG0180003240.01.T01:cds;Parent=MsG0180003240.01.T01 |
| Gene Sequence |
| Protein sequence |
