AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021282.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021282.01.T01 MTR_4g070720 96.786 560 18 0 1 560 1 560 0.0 1134
MsG0480021282.01.T01 MTR_3g117090 71.758 563 142 11 1 554 1 555 0.0 764
MsG0480021282.01.T01 MTR_3g117090 71.715 548 138 11 1 539 1 540 0.0 744
MsG0480021282.01.T01 MTR_6g015645 70.139 432 113 9 133 554 9 434 0.0 592
MsG0480021282.01.T01 MTR_8g076880 57.615 545 202 10 26 555 13 543 0.0 588
MsG0480021282.01.T01 MTR_3g117100 54.561 592 215 15 19 560 28 615 0.0 580
MsG0480021282.01.T01 MTR_1g022480 53.093 582 223 13 24 560 35 611 0.0 562
MsG0480021282.01.T01 MTR_1g022480 52.911 584 223 13 24 560 35 613 0.0 561
MsG0480021282.01.T01 MTR_1g022480 52.462 589 223 14 24 560 35 618 0.0 555
MsG0480021282.01.T01 MTR_4g070810 54.130 569 203 14 42 560 48 608 0.0 552
MsG0480021282.01.T01 MTR_5g021050 74.085 328 82 3 32 356 10 337 2.92e-180 517
MsG0480021282.01.T01 MTR_5g021050 44.048 84 44 2 480 560 388 471 5.01e-14 75.1
MsG0480021282.01.T01 MTR_5g021050 74.085 328 82 3 32 356 10 337 7.17e-180 516
MsG0480021282.01.T01 MTR_5g021050 43.023 86 46 2 480 562 388 473 4.21e-14 75.1
MsG0480021282.01.T01 MTR_3g112150 50.000 578 228 10 21 560 13 567 3.01e-175 508
MsG0480021282.01.T01 MTR_1g022480 52.390 502 194 11 99 560 31 527 1.49e-165 481
MsG0480021282.01.T01 MTR_7g056587 57.057 333 134 3 12 337 11 341 9.83e-135 404
MsG0480021282.01.T01 MTR_7g056587 57.057 333 134 3 12 337 19 349 1.29e-134 404
MsG0480021282.01.T01 MTR_7g056587 57.057 333 134 3 12 337 19 349 1.99e-134 404
MsG0480021282.01.T01 MTR_7g056587 57.057 333 134 3 12 337 33 363 2.62e-134 404
MsG0480021282.01.T01 MTR_4g070790 57.616 302 115 3 68 362 49 344 3.56e-125 373
MsG0480021282.01.T01 MTR_3g010190 43.918 485 232 13 16 465 16 495 2.70e-124 375
MsG0480021282.01.T01 MTR_8g071000 39.929 561 280 14 38 549 33 585 1.55e-118 363
MsG0480021282.01.T01 MTR_5g012460 43.990 416 215 6 15 416 28 439 3.47e-112 342
MsG0480021282.01.T01 MTR_7g056587 64.732 224 79 0 114 337 1 224 4.20e-111 340
MsG0480021282.01.T01 MTR_4g070780 46.110 347 157 5 74 416 36 356 1.35e-92 290
MsG0480021282.01.T01 MTR_4g070730 52.985 268 87 4 73 339 41 270 6.94e-91 285
MsG0480021282.01.T01 MTR_6g034285 53.922 102 47 0 132 233 195 296 2.90e-29 120
MsG0480021282.01.T01 MTR_3g098530 31.687 243 146 8 70 311 44 267 5.12e-21 93.6
MsG0480021282.01.T01 MTR_3g060670 29.412 221 125 5 96 303 33 235 2.60e-20 93.2
MsG0480021282.01.T01 MTR_2g027140 28.270 237 136 6 83 303 23 241 5.20e-20 91.7
MsG0480021282.01.T01 MTR_8g096180 32.143 224 133 7 89 306 42 252 1.43e-19 89.0
MsG0480021282.01.T01 MTR_8g096180 31.963 219 130 7 89 306 42 242 2.11e-19 88.6
MsG0480021282.01.T01 MTR_8g096170 32.877 219 128 7 89 306 45 245 3.29e-19 87.8
MsG0480021282.01.T01 MTR_7g070480 24.747 396 220 15 27 389 30 380 1.46e-18 89.0
MsG0480021282.01.T01 MTR_4g013300 27.876 226 140 7 96 312 125 336 4.45e-16 81.3
MsG0480021282.01.T01 MTR_8g095360 26.754 228 148 6 96 316 181 396 9.89e-16 80.5
MsG0480021282.01.T01 MTR_2g027140 29.082 196 123 4 114 303 1 186 3.46e-15 76.6
MsG0480021282.01.T01 MTR_1g032580 29.577 213 131 8 97 306 32 228 2.16e-13 70.9
MsG0480021282.01.T01 MTR_1g022185 30.047 213 123 9 99 306 48 239 2.72e-13 71.2
MsG0480021282.01.T01 MTR_3g097350 27.074 229 148 7 87 306 238 456 4.07e-11 66.2
MsG0480021282.01.T01 MTR_2g031610 26.087 230 149 8 86 306 132 349 6.01e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021282.01.T01 AT2G21540 62.007 558 187 10 1 554 1 537 0.0 672
MsG0480021282.01.T01 AT2G21540 62.007 558 187 10 1 554 1 537 0.0 672
MsG0480021282.01.T01 AT2G21540 62.007 558 187 10 1 554 1 537 0.0 672
MsG0480021282.01.T01 AT2G21540 62.007 558 187 10 1 554 1 537 0.0 672
MsG0480021282.01.T01 AT2G21540 61.360 559 183 11 1 554 1 531 0.0 665
MsG0480021282.01.T01 AT2G21540 61.360 559 183 11 1 554 1 531 0.0 665
MsG0480021282.01.T01 AT4G36490 60.517 542 183 9 26 554 8 531 0.0 647
MsG0480021282.01.T01 AT4G39180 58.304 566 200 13 1 554 1 542 0.0 646
MsG0480021282.01.T01 AT4G39180 58.304 566 199 14 1 554 1 541 0.0 642
MsG0480021282.01.T01 AT4G39180 58.304 566 199 14 1 554 1 541 0.0 642
MsG0480021282.01.T01 AT2G18180 58.965 541 192 9 27 555 13 535 0.0 624
MsG0480021282.01.T01 AT2G18180 58.965 541 192 9 27 555 13 535 0.0 624
MsG0480021282.01.T01 AT4G34580 58.076 551 201 13 19 554 7 542 0.0 613
MsG0480021282.01.T01 AT4G34580 58.076 551 201 13 19 554 7 542 0.0 613
MsG0480021282.01.T01 AT4G39170 55.709 578 208 12 19 556 28 597 0.0 591
MsG0480021282.01.T01 AT4G39170 55.440 579 208 13 19 557 28 596 0.0 583
MsG0480021282.01.T01 AT2G21520 53.220 590 223 15 19 557 32 619 0.0 572
MsG0480021282.01.T01 AT2G21520 53.220 590 223 15 19 557 32 619 0.0 572
MsG0480021282.01.T01 AT2G21520 53.220 590 223 15 19 557 28 615 0.0 572
MsG0480021282.01.T01 AT2G18180 59.322 472 161 8 97 555 11 464 0.0 556
MsG0480021282.01.T01 AT2G18180 59.322 472 161 8 97 555 11 464 0.0 556
MsG0480021282.01.T01 AT2G16380 52.294 545 230 10 27 560 16 541 0.0 552
MsG0480021282.01.T01 AT2G16380 52.294 545 230 10 27 560 16 541 0.0 552
MsG0480021282.01.T01 AT2G18180 59.071 452 160 7 114 555 1 437 0.0 530
MsG0480021282.01.T01 AT1G19650 48.547 585 249 12 19 560 25 600 2.33e-174 506
MsG0480021282.01.T01 AT1G19650 68.405 326 99 3 19 341 25 349 4.12e-159 461
MsG0480021282.01.T01 AT2G16380 51.648 455 193 8 114 560 1 436 5.37e-157 456
MsG0480021282.01.T01 AT1G19650 48.622 508 213 9 93 560 29 528 1.37e-154 454
MsG0480021282.01.T01 AT3G24840 46.126 555 247 12 20 549 22 549 1.46e-154 455
MsG0480021282.01.T01 AT3G24840 46.126 555 247 12 20 549 22 549 1.46e-154 455
MsG0480021282.01.T01 AT3G24840 46.126 555 247 12 20 549 22 549 1.46e-154 455
MsG0480021282.01.T01 AT3G24840 46.126 555 247 12 20 549 22 549 1.46e-154 455
MsG0480021282.01.T01 AT3G24840 46.043 556 247 12 20 549 22 550 2.96e-154 454
MsG0480021282.01.T01 AT3G24840 46.043 556 247 12 20 549 22 550 2.96e-154 454
MsG0480021282.01.T01 AT3G24840 46.043 556 247 12 20 549 22 550 2.96e-154 454
MsG0480021282.01.T01 AT1G75370 67.964 334 99 2 19 344 28 361 2.85e-150 445
MsG0480021282.01.T01 AT1G75370 67.964 334 99 2 19 344 28 361 2.57e-149 444
MsG0480021282.01.T01 AT5G56160 39.184 564 314 11 21 560 15 573 1.01e-127 386
MsG0480021282.01.T01 AT5G56160 39.184 564 314 11 21 560 15 573 1.01e-127 386
MsG0480021282.01.T01 AT5G56160 54.180 323 143 4 21 338 15 337 9.86e-125 375
MsG0480021282.01.T01 AT1G55690 56.156 333 139 6 19 344 19 351 3.67e-122 373
MsG0480021282.01.T01 AT1G55690 56.156 333 139 6 19 344 19 351 3.98e-122 373
MsG0480021282.01.T01 AT1G55690 56.156 333 139 6 19 344 19 351 3.98e-122 373
MsG0480021282.01.T01 AT1G55690 56.156 333 139 6 19 344 19 351 3.98e-122 373
MsG0480021282.01.T01 AT1G55690 56.156 333 139 6 19 344 19 351 3.98e-122 373
MsG0480021282.01.T01 AT5G47510 51.331 263 128 0 72 334 27 289 3.69e-104 317
MsG0480021282.01.T01 AT5G47510 51.331 263 128 0 72 334 27 289 6.40e-104 318
MsG0480021282.01.T01 AT5G47510 51.331 263 128 0 72 334 26 288 7.53e-104 318
MsG0480021282.01.T01 AT5G47510 52.381 231 110 0 104 334 2 232 1.01e-92 287
MsG0480021282.01.T01 AT5G47730 28.631 241 157 5 72 303 7 241 1.12e-21 97.1
MsG0480021282.01.T01 AT5G47730 28.631 241 157 5 72 303 7 241 1.12e-21 97.1
MsG0480021282.01.T01 AT1G55840 28.230 209 142 3 97 303 12 214 3.40e-19 89.0
MsG0480021282.01.T01 AT1G55840 28.230 209 142 3 97 303 39 241 4.38e-19 89.0
MsG0480021282.01.T01 AT1G01630 29.644 253 151 9 57 306 17 245 3.72e-18 84.7
MsG0480021282.01.T01 AT5G47730 28.646 192 129 3 114 303 1 186 3.26e-17 82.8
MsG0480021282.01.T01 AT5G47730 28.646 192 129 3 114 303 1 186 3.26e-17 82.8
MsG0480021282.01.T01 AT1G72160 25.098 255 164 8 72 310 136 379 1.29e-16 83.2
MsG0480021282.01.T01 AT3G51670 26.271 236 146 8 96 323 84 299 3.26e-13 72.0
MsG0480021282.01.T01 AT4G09160 25.221 226 146 7 96 310 316 529 7.72e-13 71.6
MsG0480021282.01.T01 AT4G09160 25.221 226 146 7 96 310 316 529 8.21e-13 71.6
MsG0480021282.01.T01 AT4G09160 25.221 226 146 7 96 310 341 554 8.30e-13 71.6
MsG0480021282.01.T01 AT1G14820 26.923 234 152 7 93 323 27 244 8.72e-12 65.9
MsG0480021282.01.T01 AT1G14820 27.004 237 154 7 90 323 11 231 9.30e-12 65.9
MsG0480021282.01.T01 AT1G14820 27.004 237 154 7 90 323 11 231 9.30e-12 65.9

Find 134 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTATTGCTGCCTTCTTTA+AGG 0.090734 4:-56263505 None:intergenic
GAAACTACCTTCAAGATTTC+TGG 0.128425 4:-56265065 None:intergenic
CAGAATTATGGCCATGGTTT+TGG 0.149183 4:+56265782 MsG0480021282.01.T01:CDS
ACTATTGATCAACCTGTTAA+AGG 0.167552 4:+56263099 MsG0480021282.01.T01:CDS
TCAATGCTGGTTCGGGATTT+AGG 0.174214 4:+56264585 MsG0480021282.01.T01:CDS
TTGAGCAATTCCTCCATTTC+AGG 0.178864 4:-56266008 None:intergenic
AGGTCTTGAGATTGAATATT+TGG 0.201747 4:+56263455 MsG0480021282.01.T01:intron
TTTATTGAATCTCTTGTATA+TGG 0.251854 4:-56263044 None:intergenic
CTCCAATGGAGGAGGGAATT+TGG 0.273143 4:+56263865 MsG0480021282.01.T01:CDS
CAGTGAACTTCCAGAGTTCT+TGG 0.309109 4:+56264977 MsG0480021282.01.T01:intron
TTGAGGGTAATAGTTCTTCT+AGG 0.323926 4:-56263653 None:intergenic
ACAGGTTGATCAATAGTAAT+AGG 0.325672 4:-56263093 None:intergenic
TTCATCATCAATGCTGGTTC+GGG 0.333695 4:+56264578 MsG0480021282.01.T01:CDS
ACCTTCCATGCCACCTGAAA+TGG 0.343417 4:+56265995 MsG0480021282.01.T01:CDS
TAGATTTACTAACCTTTAAC+AGG 0.345398 4:-56263111 None:intergenic
GCAAGAAAACAGTACCTTCT+TGG 0.359188 4:-56266078 None:intergenic
GTGCCTTCGCCCCTTCTTGA+AGG 0.373381 4:-56263550 None:intergenic
GGTATATATTGATGGCAATA+TGG 0.374670 4:+56265878 MsG0480021282.01.T01:CDS
TGAATGACAAACAAGTATCT+TGG 0.383285 4:+56265531 MsG0480021282.01.T01:CDS
AGAAGGGGCGAAGGCACAAC+AGG 0.395434 4:+56263556 MsG0480021282.01.T01:CDS
GGTAACAATGTATGCAAGAA+TGG 0.412286 4:+56265738 MsG0480021282.01.T01:CDS
CCCAACCTTTCTATGTAAAC+AGG 0.413197 4:-56264098 None:intergenic
AGTGAACTTCCAGAGTTCTT+GGG 0.420010 4:+56264978 MsG0480021282.01.T01:intron
TGATCAAAGCACAACTATCT+TGG 0.420976 4:+56264250 MsG0480021282.01.T01:CDS
GTTCATCATCAATGCTGGTT+CGG 0.428392 4:+56264577 MsG0480021282.01.T01:CDS
CAACTCCATGTGTTCCTTGA+GGG 0.429365 4:-56264061 None:intergenic
ACTGATGCAAGTAACGACTA+TGG 0.432973 4:+56264139 MsG0480021282.01.T01:CDS
AATCGATACAGAAGAGTTGC+AGG 0.433152 4:+56263602 MsG0480021282.01.T01:CDS
GTTCAAACATTCCTTCAAGA+AGG 0.436645 4:+56263539 MsG0480021282.01.T01:CDS
TTACATAGAAAGGTTGGGTT+TGG 0.438060 4:+56264103 MsG0480021282.01.T01:CDS
ATCAGTACAAAATGATCAAA+AGG 0.448986 4:+56265559 MsG0480021282.01.T01:CDS
TCGAGGTGGTCTTGGGATCA+AGG 0.450087 4:-56264634 None:intergenic
GGTAACTCGGTATATATTGA+TGG 0.451076 4:+56265870 MsG0480021282.01.T01:CDS
TCCATTTCAGGTGGCATGGA+AGG 0.453045 4:-56265996 None:intergenic
TGATTTCAAGCAACTTGCTC+TGG 0.456669 4:-56264791 None:intergenic
CGTTGATGTGCAGATTGCTT+TGG 0.457244 4:+56265717 MsG0480021282.01.T01:intron
GAAGACCTGTTTACATAGAA+AGG 0.458189 4:+56264093 MsG0480021282.01.T01:CDS
GAATGACAAACAAGTATCTT+GGG 0.458886 4:+56265532 MsG0480021282.01.T01:CDS
ACCTGTTTACATAGAAAGGT+TGG 0.459238 4:+56264097 MsG0480021282.01.T01:CDS
CCTGTTTACATAGAAAGGTT+GGG 0.459264 4:+56264098 MsG0480021282.01.T01:CDS
CAAGGGCTTCAGAAGATTGA+TGG 0.460929 4:+56264442 MsG0480021282.01.T01:CDS
GATGATGAACATACGGTTCA+AGG 0.463960 4:-56264564 None:intergenic
GTACATGGTACTTAAGATAT+CGG 0.465167 4:-56264163 None:intergenic
CACCAAATTCCCTCCTCCAT+TGG 0.472756 4:-56263867 None:intergenic
CATCAATCTTCTGAAGCCCT+TGG 0.481135 4:-56264441 None:intergenic
TTCAAACATTCCTTCAAGAA+GGG 0.481510 4:+56263540 MsG0480021282.01.T01:CDS
CTAATTGATGATCAGGTCCT+AGG 0.481730 4:+56264759 MsG0480021282.01.T01:intron
AGGAACACATGGAGTTGATA+AGG 0.483607 4:+56264067 MsG0480021282.01.T01:CDS
ATTTGATACATACCACTCCT+TGG 0.486645 4:-56264277 None:intergenic
TTTGCTGCAATTGAACAAGC+AGG 0.492349 4:-56264218 None:intergenic
ATGACTGCAATTGCATTGTA+TGG 0.496484 4:+56265849 MsG0480021282.01.T01:CDS
ACACGTGAGGGTTCAATTGT+GGG 0.501983 4:+56262975 MsG0480021282.01.T01:five_prime_UTR
AACCATGGCCATAATTCTGC+CGG 0.506924 4:-56265778 None:intergenic
TTCCGGCAGAATTATGGCCA+TGG 0.507474 4:+56265776 MsG0480021282.01.T01:CDS
AAGATTTCTGGATCATTCCA+TGG 0.509508 4:-56265053 None:intergenic
TGCTCTGGTATTTGTTACCT+AGG 0.510194 4:-56264776 None:intergenic
TGCTTGAAATCATCGATGCC+AGG 0.510523 4:+56264802 MsG0480021282.01.T01:CDS
TACACGTGAGGGTTCAATTG+TGG 0.510837 4:+56262974 MsG0480021282.01.T01:five_prime_UTR
TTCCTCCATTTCAGGTGGCA+TGG 0.511464 4:-56266000 None:intergenic
GAAAACTTTATCCGAAGTTG+AGG 0.528688 4:+56265203 MsG0480021282.01.T01:CDS
GATGAAAAGAGAACAAGGCT+TGG 0.532278 4:+56263480 MsG0480021282.01.T01:CDS
ATTCACCTTCTCTTCTAGAT+CGG 0.535193 4:-56265958 None:intergenic
TCTTGAGATTGAATATTTGG+AGG 0.535896 4:+56263458 MsG0480021282.01.T01:CDS
AGAGTTGGCTACAGCCAAGA+AGG 0.536487 4:+56266064 MsG0480021282.01.T01:CDS
TGCATATCAGTTCGACACCT+TGG 0.542514 4:+56265502 MsG0480021282.01.T01:CDS
CAGATATGCTCCAATGGAGG+AGG 0.542666 4:+56263857 MsG0480021282.01.T01:CDS
ATCATGTGTGACACTATGTC+TGG 0.544111 4:+56263069 MsG0480021282.01.T01:exon
ATGATCATCATATGATGCTA+AGG 0.545044 4:+56263682 MsG0480021282.01.T01:CDS
ATGAATTAGATGGTTCAAAA+CGG 0.546710 4:+56265162 MsG0480021282.01.T01:intron
CGTATGTTCATCATCAATGC+TGG 0.547791 4:+56264572 MsG0480021282.01.T01:CDS
GTGAACTTCCAGAGTTCTTG+GGG 0.551248 4:+56264979 MsG0480021282.01.T01:intron
ACAAGCAGGCATCTTAACAT+TGG 0.553424 4:-56264204 None:intergenic
TGGTTGCATGCTTTCTGACA+AGG 0.554475 4:+56265028 MsG0480021282.01.T01:CDS
TTTGTCATTCATTGAGACCA+AGG 0.554617 4:-56265519 None:intergenic
TCTAAACCGTGTCGATACAC+TGG 0.555753 4:+56266037 MsG0480021282.01.T01:CDS
ATTTGGTGCCGATACTATCA+TGG 0.556047 4:+56263882 MsG0480021282.01.T01:CDS
GAATGATCCAGAAATCTTGA+AGG 0.557107 4:+56265058 MsG0480021282.01.T01:CDS
CATTTCCGTTGATGATCACA+TGG 0.558838 4:+56265917 MsG0480021282.01.T01:CDS
TCTTCTCAAACTCTCGTACA+TGG 0.560760 4:-56264178 None:intergenic
CGATACACTGGAGCAAGAGT+TGG 0.564279 4:+56266049 MsG0480021282.01.T01:CDS
TCAACTCCATGTGTTCCTTG+AGG 0.566578 4:-56264062 None:intergenic
TGCTTTCTGACAAGGGACCA+TGG 0.567626 4:+56265036 MsG0480021282.01.T01:CDS
TACTACCCTCAAGGAACACA+TGG 0.568354 4:+56264056 MsG0480021282.01.T01:CDS
AATGTAGATTCTTGAGAGCA+AGG 0.568501 4:+56263800 MsG0480021282.01.T01:intron
TTCCATGCCACCTGAAATGG+AGG 0.574584 4:+56265998 MsG0480021282.01.T01:CDS
CAGCATTGATGATGAACATA+CGG 0.574837 4:-56264571 None:intergenic
TGATCATCAACGGAAATGAC+AGG 0.575643 4:-56265912 None:intergenic
TCAAACATTCCTTCAAGAAG+GGG 0.577257 4:+56263541 MsG0480021282.01.T01:CDS
TGTTGGTGACAAATAGGTGT+AGG 0.580923 4:+56262951 None:intergenic
GTTCTAAAATACTACCCTCA+AGG 0.581819 4:+56264047 MsG0480021282.01.T01:CDS
GAAGCTCCACTTGCCTAGCA+AGG 0.584248 4:-56266183 None:intergenic
GGTTGCATGCTTTCTGACAA+GGG 0.584666 4:+56265029 MsG0480021282.01.T01:CDS
CATGACCGATCTAGAAGAGA+AGG 0.585875 4:+56265953 MsG0480021282.01.T01:CDS
AGCAATTCCTCCATTTCAGG+TGG 0.586975 4:-56266005 None:intergenic
AAATACCTCCATGATAGTAT+CGG 0.587094 4:-56263890 None:intergenic
ACACATGGAGTTGATAAGGA+TGG 0.589217 4:+56264071 MsG0480021282.01.T01:CDS
AGACGAAGGAGTGTGTCAAA+AGG 0.590474 4:+56265242 MsG0480021282.01.T01:CDS
CACTTGATGATGCCCTTGCT+AGG 0.595315 4:+56266170 MsG0480021282.01.T01:CDS
AATTGCATTGTATGGTAACT+CGG 0.595923 4:+56265857 MsG0480021282.01.T01:CDS
GGTGGTCTTGGGATCAAGGA+AGG 0.597891 4:-56264630 None:intergenic
GCTGCAAGAGATCTCATCCA+AGG 0.597936 4:+56264424 MsG0480021282.01.T01:CDS
AAAACAATCGTCGAAGACGA+AGG 0.598967 4:+56265228 MsG0480021282.01.T01:CDS
AAGGCTTGGATCCTTAAAGA+AGG 0.599891 4:+56263494 MsG0480021282.01.T01:CDS
TAGAGCCATGTGATCATCAA+CGG 0.599949 4:-56265922 None:intergenic
AACTTACTTCTGCTATAGCA+TGG 0.605936 4:-56265394 None:intergenic
AAGCTCCACTTGCCTAGCAA+GGG 0.609549 4:-56266182 None:intergenic
ACAACTATCTTGGATGTCCA+AGG 0.610723 4:+56264260 MsG0480021282.01.T01:CDS
CTCTTGTATATGGTTACACA+AGG 0.612027 4:-56263034 None:intergenic
TGACGTTCATCCGCATGACA+CGG 0.612693 4:+56265811 MsG0480021282.01.T01:CDS
CTGCAAGAGATCTCATCCAA+GGG 0.614690 4:+56264425 MsG0480021282.01.T01:CDS
ATTCCTTCAAGAAGGGGCGA+AGG 0.615207 4:+56263547 MsG0480021282.01.T01:CDS
TGTGGGCAGATATGCTCCAA+TGG 0.615883 4:+56263851 MsG0480021282.01.T01:CDS
CAACAAAGAATACGTTCTCG+AGG 0.621800 4:+56265364 MsG0480021282.01.T01:CDS
TGGAGGATGAAAAGAGAACA+AGG 0.626518 4:+56263475 MsG0480021282.01.T01:CDS
ACGGTGAAGCAAAATGCAGA+AGG 0.628053 4:+56265181 MsG0480021282.01.T01:CDS
TTGGTATACTCCGTGTCATG+CGG 0.646880 4:-56265821 None:intergenic
CTTGCTCCAGTGTATCGACA+CGG 0.648033 4:-56266043 None:intergenic
TATCTTGGATGTCCAAGGAG+TGG 0.654369 4:+56264265 MsG0480021282.01.T01:CDS
ACTTGTACTTGTGCAGACAA+AGG 0.654424 4:+56265005 MsG0480021282.01.T01:CDS
CGTCATGATTCCCAAAACCA+TGG 0.657898 4:-56265793 None:intergenic
AGATATGCTCCAATGGAGGA+GGG 0.660017 4:+56263858 MsG0480021282.01.T01:CDS
CAAAGAATACGTTCTCGAGG+AGG 0.660775 4:+56265367 MsG0480021282.01.T01:CDS
TGACAAACAAGTATCTTGGG+AGG 0.664438 4:+56265535 MsG0480021282.01.T01:CDS
TGATGCCCTTGCTAGGCAAG+TGG 0.666904 4:+56266177 MsG0480021282.01.T01:CDS
AATAGGTGTAGGTACACGTG+AGG 0.672749 4:+56262962 None:intergenic
GAACTTCCAGAGTTCTTGGG+GGG 0.675384 4:+56264981 MsG0480021282.01.T01:CDS
GGGCAGATATGCTCCAATGG+AGG 0.678590 4:+56263854 MsG0480021282.01.T01:CDS
CAGGGTTATATCTGTCATCG+AGG 0.687126 4:+56263575 MsG0480021282.01.T01:CDS
TGAACTTCCAGAGTTCTTGG+GGG 0.688265 4:+56264980 MsG0480021282.01.T01:CDS
ATAGGTGTAGGTACACGTGA+GGG 0.709115 4:+56262963 None:intergenic
TGTACTTGTGCAGACAAAGG+TGG 0.715199 4:+56265008 MsG0480021282.01.T01:CDS
GAAGGGGCGAAGGCACAACA+GGG 0.715484 4:+56263557 MsG0480021282.01.T01:CDS
TGATGGTGACAACTATCCTG+AGG 0.717578 4:+56264459 MsG0480021282.01.T01:CDS
TGGTGCCGATACTATCATGG+AGG 0.741681 4:+56263885 MsG0480021282.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATGTTCAAATTTA+AGG - Chr4:56263293-56263312 None:intergenic 10.0%
!!! ATTTATTTGTTCCTTTTTAT+TGG + Chr4:56266140-56266159 MsG0480021282.01.T01:intron 15.0%
!!! TTTTAATTTATGCAAAAAAC+AGG + Chr4:56263435-56263454 MsG0480021282.01.T01:intron 15.0%
!! AAGAAAAAAGAAGAAAAAGT+TGG + Chr4:56266221-56266240 MsG0480021282.01.T01:CDS 20.0%
!! GAATATCATAAGAAAAAGAA+AGG - Chr4:56265328-56265347 None:intergenic 20.0%
!! GTATTAGAATATGAAATTTC+AGG + Chr4:56263267-56263286 MsG0480021282.01.T01:intron 20.0%
!! TGACTAACATAAATTTCTTT+CGG + Chr4:56263987-56264006 MsG0480021282.01.T01:intron 20.0%
!! TTTATTGAATCTCTTGTATA+TGG - Chr4:56263047-56263066 None:intergenic 20.0%
!!! TCTTTTTCTTATGATATTCA+GGG + Chr4:56265329-56265348 MsG0480021282.01.T01:intron 20.0%
!!! TTCTTTTTCTTATGATATTC+AGG + Chr4:56265328-56265347 MsG0480021282.01.T01:intron 20.0%
! ATCAGTACAAAATGATCAAA+AGG + Chr4:56265559-56265578 MsG0480021282.01.T01:CDS 25.0%
! ATGAATTAGATGGTTCAAAA+CGG + Chr4:56265162-56265181 MsG0480021282.01.T01:intron 25.0%
! CTGATCATCAATTAGTAATA+TGG - Chr4:56264754-56264773 None:intergenic 25.0%
! TAAAGAAGAAAATATAGACC+TGG - Chr4:56264823-56264842 None:intergenic 25.0%
! TACAAAATAAAAAGCTTACG+TGG - Chr4:56264664-56264683 None:intergenic 25.0%
! TAGATTTACTAACCTTTAAC+AGG - Chr4:56263114-56263133 None:intergenic 25.0%
! TATTCGTATTATGTGACATA+TGG - Chr4:56264914-56264933 None:intergenic 25.0%
! TCTTGAAACTATAAAGAAGT+AGG - Chr4:56265278-56265297 None:intergenic 25.0%
! TGAAAAAACAAAGCAAATGT+GGG + Chr4:56263834-56263853 MsG0480021282.01.T01:CDS 25.0%
! TTGAAAAAACAAAGCAAATG+TGG + Chr4:56263833-56263852 MsG0480021282.01.T01:CDS 25.0%
! TTTAAGAAATTGACCATGAA+AGG - Chr4:56263163-56263182 None:intergenic 25.0%
!! CATATTACTAATTGATGATC+AGG + Chr4:56264752-56264771 MsG0480021282.01.T01:intron 25.0%
!! GGATTTAGAAATCAATTTTC+CGG + Chr4:56265759-56265778 MsG0480021282.01.T01:CDS 25.0%
!! TCTTTACTGTGTTGATAAAA+TGG - Chr4:56265664-56265683 None:intergenic 25.0%
!!! AATTTCTTTCGGTTTTGTTA+AGG + Chr4:56263998-56264017 MsG0480021282.01.T01:intron 25.0%
!!! ATTTAACTCCTTGTGTTTTT+TGG + Chr4:56264949-56264968 MsG0480021282.01.T01:intron 25.0%
!!! TTTAACTCCTTGTGTTTTTT+GGG + Chr4:56264950-56264969 MsG0480021282.01.T01:intron 25.0%
!!! TTTTTTCCTGATGAATTAGA+TGG + Chr4:56265152-56265171 MsG0480021282.01.T01:intron 25.0%
!!! TTTTTTTATGTATGAAGCTG+AGG + Chr4:56263308-56263327 MsG0480021282.01.T01:intron 25.0%
AAATACCTCCATGATAGTAT+CGG - Chr4:56263893-56263912 None:intergenic 30.0%
AAATCTTGAAGGTAGTTTCA+CGG + Chr4:56265069-56265088 MsG0480021282.01.T01:intron 30.0%
AACTGTCTAATCAAAGCATA+AGG - Chr4:56263747-56263766 None:intergenic 30.0%
AATTGCATTGTATGGTAACT+CGG + Chr4:56265857-56265876 MsG0480021282.01.T01:CDS 30.0%
ACTATTGATCAACCTGTTAA+AGG + Chr4:56263099-56263118 MsG0480021282.01.T01:CDS 30.0%
AGGTCTTGAGATTGAATATT+TGG + Chr4:56263455-56263474 MsG0480021282.01.T01:intron 30.0%
ATGATCATCATATGATGCTA+AGG + Chr4:56263682-56263701 MsG0480021282.01.T01:CDS 30.0%
ATTTACTGTATGAGTCTCAA+GGG - Chr4:56263711-56263730 None:intergenic 30.0%
GAATGACAAACAAGTATCTT+GGG + Chr4:56265532-56265551 MsG0480021282.01.T01:CDS 30.0%
GTACATGGTACTTAAGATAT+CGG - Chr4:56264166-56264185 None:intergenic 30.0%
TAAGTACTTACTGTATAGCA+TGG + Chr4:56264372-56264391 MsG0480021282.01.T01:intron 30.0%
TATTTACTGTATGAGTCTCA+AGG - Chr4:56263712-56263731 None:intergenic 30.0%
TCTTGAGATTGAATATTTGG+AGG + Chr4:56263458-56263477 MsG0480021282.01.T01:CDS 30.0%
TGAAAAGAAAAGTGGAACTA+AGG - Chr4:56264538-56264557 None:intergenic 30.0%
TGAATGACAAACAAGTATCT+TGG + Chr4:56265531-56265550 MsG0480021282.01.T01:CDS 30.0%
TTCAAACATTCCTTCAAGAA+GGG + Chr4:56263540-56263559 MsG0480021282.01.T01:CDS 30.0%
TTTGAACCATCTAATTCATC+AGG - Chr4:56265161-56265180 None:intergenic 30.0%
! ATAGTTTCAAGAGCATAGTT+TGG + Chr4:56265286-56265305 MsG0480021282.01.T01:intron 30.0%
! ATGATGATCATCATGTTTTG+AGG - Chr4:56263673-56263692 None:intergenic 30.0%
! GGTATATATTGATGGCAATA+TGG + Chr4:56265878-56265897 MsG0480021282.01.T01:CDS 30.0%
! TGTTAAGGATTTTGAATTCG+AGG + Chr4:56264013-56264032 MsG0480021282.01.T01:intron 30.0%
! TGTTCCTTTTTATTGGCATT+AGG + Chr4:56266147-56266166 MsG0480021282.01.T01:intron 30.0%
!! AAAGAAGAAAAAGTTGGTAG+AGG + Chr4:56266227-56266246 MsG0480021282.01.T01:CDS 30.0%
!! ACAGGTTGATCAATAGTAAT+AGG - Chr4:56263096-56263115 None:intergenic 30.0%
!! TGATGATCATCATGTTTTGA+GGG - Chr4:56263672-56263691 None:intergenic 30.0%
AAATTGACCATGAAAGGCAA+AGG - Chr4:56263157-56263176 None:intergenic 35.0%
AACTTACTTCTGCTATAGCA+TGG - Chr4:56265397-56265416 None:intergenic 35.0%
AATGTAGATTCTTGAGAGCA+AGG + Chr4:56263800-56263819 MsG0480021282.01.T01:intron 35.0%
ACCTGTTTACATAGAAAGGT+TGG + Chr4:56264097-56264116 MsG0480021282.01.T01:CDS 35.0%
ACTTATTGCTGCCTTCTTTA+AGG - Chr4:56263508-56263527 None:intergenic 35.0%
AGTGCCTAATGCCAATAAAA+AGG - Chr4:56266154-56266173 None:intergenic 35.0%
ATGACTGCAATTGCATTGTA+TGG + Chr4:56265849-56265868 MsG0480021282.01.T01:CDS 35.0%
ATTCACCTTCTCTTCTAGAT+CGG - Chr4:56265961-56265980 None:intergenic 35.0%
ATTTGATACATACCACTCCT+TGG - Chr4:56264280-56264299 None:intergenic 35.0%
CCTGTTTACATAGAAAGGTT+GGG + Chr4:56264098-56264117 MsG0480021282.01.T01:CDS 35.0%
CGTATTATGTGACATATGGA+TGG - Chr4:56264910-56264929 None:intergenic 35.0%
CTCTTGTATATGGTTACACA+AGG - Chr4:56263037-56263056 None:intergenic 35.0%
CTGTTAACCCAAAAAACACA+AGG - Chr4:56264960-56264979 None:intergenic 35.0%
GAAAACTTTATCCGAAGTTG+AGG + Chr4:56265203-56265222 MsG0480021282.01.T01:CDS 35.0%
GAAACTACCTTCAAGATTTC+TGG - Chr4:56265068-56265087 None:intergenic 35.0%
GAAGACCTGTTTACATAGAA+AGG + Chr4:56264093-56264112 MsG0480021282.01.T01:CDS 35.0%
GAATGATCCAGAAATCTTGA+AGG + Chr4:56265058-56265077 MsG0480021282.01.T01:CDS 35.0%
GGACTGTATGAAAAGAAAAG+TGG - Chr4:56264546-56264565 None:intergenic 35.0%
GGTAACAATGTATGCAAGAA+TGG + Chr4:56265738-56265757 MsG0480021282.01.T01:CDS 35.0%
GGTAACTCGGTATATATTGA+TGG + Chr4:56265870-56265889 MsG0480021282.01.T01:CDS 35.0%
GTAGGTAAAAATAGTACCTC+AGG - Chr4:56264478-56264497 None:intergenic 35.0%
GTTCAAACATTCCTTCAAGA+AGG + Chr4:56263539-56263558 MsG0480021282.01.T01:CDS 35.0%
TCAAACATTCCTTCAAGAAG+GGG + Chr4:56263541-56263560 MsG0480021282.01.T01:CDS 35.0%
TGATCAAAGCACAACTATCT+TGG + Chr4:56264250-56264269 MsG0480021282.01.T01:CDS 35.0%
TTACATAGAAAGGTTGGGTT+TGG + Chr4:56264103-56264122 MsG0480021282.01.T01:CDS 35.0%
TTGAGGGTAATAGTTCTTCT+AGG - Chr4:56263656-56263675 None:intergenic 35.0%
TTTGTCATTCATTGAGACCA+AGG - Chr4:56265522-56265541 None:intergenic 35.0%
! AAGATTTCTGGATCATTCCA+TGG - Chr4:56265056-56265075 None:intergenic 35.0%
! AGAATTATGGCCATGGTTTT+GGG + Chr4:56265783-56265802 MsG0480021282.01.T01:CDS 35.0%
! GATTGTTTTCTCCTCAACTT+CGG - Chr4:56265217-56265236 None:intergenic 35.0%
! TCAATTTTCCGGCAGAATTA+TGG + Chr4:56265770-56265789 MsG0480021282.01.T01:CDS 35.0%
! TTTTACCTACTCGAGCATAT+TGG + Chr4:56264488-56264507 MsG0480021282.01.T01:intron 35.0%
!! CAGCATTGATGATGAACATA+CGG - Chr4:56264574-56264593 None:intergenic 35.0%
!! GTTCTAAAATACTACCCTCA+AGG + Chr4:56264047-56264066 MsG0480021282.01.T01:CDS 35.0%
!!! GCAATTGCAGTCATTTTTGT+TGG - Chr4:56265843-56265862 None:intergenic 35.0%
AAAACAATCGTCGAAGACGA+AGG + Chr4:56265228-56265247 MsG0480021282.01.T01:CDS 40.0%
AAGGCTTGGATCCTTAAAGA+AGG + Chr4:56263494-56263513 MsG0480021282.01.T01:CDS 40.0%
AATCGATACAGAAGAGTTGC+AGG + Chr4:56263602-56263621 MsG0480021282.01.T01:CDS 40.0%
ACAACTATCTTGGATGTCCA+AGG + Chr4:56264260-56264279 MsG0480021282.01.T01:CDS 40.0%
ACAAGCAGGCATCTTAACAT+TGG - Chr4:56264207-56264226 None:intergenic 40.0%
ACTGATGCAAGTAACGACTA+TGG + Chr4:56264139-56264158 MsG0480021282.01.T01:CDS 40.0%
ACTGTATAGCATGGTTGATC+AGG + Chr4:56264381-56264400 MsG0480021282.01.T01:intron 40.0%
ACTTGTACTTGTGCAGACAA+AGG + Chr4:56265005-56265024 MsG0480021282.01.T01:CDS 40.0%
AGTGAACTTCCAGAGTTCTT+GGG + Chr4:56264978-56264997 MsG0480021282.01.T01:intron 40.0%
ATCATGTGTGACACTATGTC+TGG + Chr4:56263069-56263088 MsG0480021282.01.T01:exon 40.0%
CAAAGCAATCTGCACATCAA+CGG - Chr4:56265719-56265738 None:intergenic 40.0%
CAACAAAGAATACGTTCTCG+AGG + Chr4:56265364-56265383 MsG0480021282.01.T01:CDS 40.0%
CATTACACCTTTGCCTTTCA+TGG + Chr4:56263147-56263166 MsG0480021282.01.T01:intron 40.0%
CCCAACCTTTCTATGTAAAC+AGG - Chr4:56264101-56264120 None:intergenic 40.0%
CCTGCAAAATTGAAAGTGAG+TGG - Chr4:56265466-56265485 None:intergenic 40.0%
CGTATGTTCATCATCAATGC+TGG + Chr4:56264572-56264591 MsG0480021282.01.T01:CDS 40.0%
CTGTATAGCATGGTTGATCA+GGG + Chr4:56264382-56264401 MsG0480021282.01.T01:intron 40.0%
GATGAAAAGAGAACAAGGCT+TGG + Chr4:56263480-56263499 MsG0480021282.01.T01:CDS 40.0%
GATGATGAACATACGGTTCA+AGG - Chr4:56264567-56264586 None:intergenic 40.0%
GCAAGAAAACAGTACCTTCT+TGG - Chr4:56266081-56266100 None:intergenic 40.0%
TAGAGCCATGTGATCATCAA+CGG - Chr4:56265925-56265944 None:intergenic 40.0%
TCTTCTCAAACTCTCGTACA+TGG - Chr4:56264181-56264200 None:intergenic 40.0%
TGACAAACAAGTATCTTGGG+AGG + Chr4:56265535-56265554 MsG0480021282.01.T01:CDS 40.0%
TGATCATCAACGGAAATGAC+AGG - Chr4:56265915-56265934 None:intergenic 40.0%
TGGAGGATGAAAAGAGAACA+AGG + Chr4:56263475-56263494 MsG0480021282.01.T01:CDS 40.0%
TTGAACCAATATGCTCGAGT+AGG - Chr4:56264496-56264515 None:intergenic 40.0%
TTGAGCAATTCCTCCATTTC+AGG - Chr4:56266011-56266030 None:intergenic 40.0%
TTTGCTGCAATTGAACAAGC+AGG - Chr4:56264221-56264240 None:intergenic 40.0%
! AAAGCTTACGTGGATTTTCG+AGG - Chr4:56264654-56264673 None:intergenic 40.0%
! CAGAATTATGGCCATGGTTT+TGG + Chr4:56265782-56265801 MsG0480021282.01.T01:CDS 40.0%
! CCACTCACTTTCAATTTTGC+AGG + Chr4:56265463-56265482 MsG0480021282.01.T01:intron 40.0%
! CTAATTGATGATCAGGTCCT+AGG + Chr4:56264759-56264778 MsG0480021282.01.T01:intron 40.0%
! GTTCATCATCAATGCTGGTT+CGG + Chr4:56264577-56264596 MsG0480021282.01.T01:CDS 40.0%
! TGATTTCAAGCAACTTGCTC+TGG - Chr4:56264794-56264813 None:intergenic 40.0%
! TGCTCTGGTATTTGTTACCT+AGG - Chr4:56264779-56264798 None:intergenic 40.0%
!! ACACATGGAGTTGATAAGGA+TGG + Chr4:56264071-56264090 MsG0480021282.01.T01:CDS 40.0%
!! AGGAACACATGGAGTTGATA+AGG + Chr4:56264067-56264086 MsG0480021282.01.T01:CDS 40.0%
!! ATTTGGTGCCGATACTATCA+TGG + Chr4:56263882-56263901 MsG0480021282.01.T01:CDS 40.0%
!! CATTTCCGTTGATGATCACA+TGG + Chr4:56265917-56265936 MsG0480021282.01.T01:CDS 40.0%
!! GTTCGGGATTTAGGATTTTG+TGG + Chr4:56264594-56264613 MsG0480021282.01.T01:CDS 40.0%
!! TTCATCATCAATGCTGGTTC+GGG + Chr4:56264578-56264597 MsG0480021282.01.T01:CDS 40.0%
AACCATGGCCATAATTCTGC+CGG - Chr4:56265781-56265800 None:intergenic 45.0%
ACACGTGAGGGTTCAATTGT+GGG + Chr4:56262975-56262994 MsG0480021282.01.T01:five_prime_UTR 45.0%
ACGGTGAAGCAAAATGCAGA+AGG + Chr4:56265181-56265200 MsG0480021282.01.T01:CDS 45.0%
AGATATGCTCCAATGGAGGA+GGG + Chr4:56263858-56263877 MsG0480021282.01.T01:CDS 45.0%
AGCAATTCCTCCATTTCAGG+TGG - Chr4:56266008-56266027 None:intergenic 45.0%
CAAAGAATACGTTCTCGAGG+AGG + Chr4:56265367-56265386 MsG0480021282.01.T01:CDS 45.0%
CAACTCCATGTGTTCCTTGA+GGG - Chr4:56264064-56264083 None:intergenic 45.0%
CAAGGGCTTCAGAAGATTGA+TGG + Chr4:56264442-56264461 MsG0480021282.01.T01:CDS 45.0%
CAGGGTTATATCTGTCATCG+AGG + Chr4:56263575-56263594 MsG0480021282.01.T01:CDS 45.0%
CAGTGAACTTCCAGAGTTCT+TGG + Chr4:56264977-56264996 MsG0480021282.01.T01:intron 45.0%
CATGACCGATCTAGAAGAGA+AGG + Chr4:56265953-56265972 MsG0480021282.01.T01:CDS 45.0%
CGTCATGATTCCCAAAACCA+TGG - Chr4:56265796-56265815 None:intergenic 45.0%
CGTTGATGTGCAGATTGCTT+TGG + Chr4:56265717-56265736 MsG0480021282.01.T01:intron 45.0%
CTGCAAGAGATCTCATCCAA+GGG + Chr4:56264425-56264444 MsG0480021282.01.T01:CDS 45.0%
GGTTGCATGCTTTCTGACAA+GGG + Chr4:56265029-56265048 MsG0480021282.01.T01:CDS 45.0%
GTGAACTTCCAGAGTTCTTG+GGG + Chr4:56264979-56264998 MsG0480021282.01.T01:intron 45.0%
TACACGTGAGGGTTCAATTG+TGG + Chr4:56262974-56262993 MsG0480021282.01.T01:five_prime_UTR 45.0%
TACTACCCTCAAGGAACACA+TGG + Chr4:56264056-56264075 MsG0480021282.01.T01:CDS 45.0%
TATCTTGGATGTCCAAGGAG+TGG + Chr4:56264265-56264284 MsG0480021282.01.T01:CDS 45.0%
TCAACTCCATGTGTTCCTTG+AGG - Chr4:56264065-56264084 None:intergenic 45.0%
TGAACTTCCAGAGTTCTTGG+GGG + Chr4:56264980-56264999 MsG0480021282.01.T01:CDS 45.0%
TGCATATCAGTTCGACACCT+TGG + Chr4:56265502-56265521 MsG0480021282.01.T01:CDS 45.0%
TGCTTGAAATCATCGATGCC+AGG + Chr4:56264802-56264821 MsG0480021282.01.T01:CDS 45.0%
TGGTTGCATGCTTTCTGACA+AGG + Chr4:56265028-56265047 MsG0480021282.01.T01:CDS 45.0%
TGTACTTGTGCAGACAAAGG+TGG + Chr4:56265008-56265027 MsG0480021282.01.T01:CDS 45.0%
TTGGTATACTCCGTGTCATG+CGG - Chr4:56265824-56265843 None:intergenic 45.0%
! AGACGAAGGAGTGTGTCAAA+AGG + Chr4:56265242-56265261 MsG0480021282.01.T01:CDS 45.0%
! TCTAAACCGTGTCGATACAC+TGG + Chr4:56266037-56266056 MsG0480021282.01.T01:CDS 45.0%
! TGATGGTGACAACTATCCTG+AGG + Chr4:56264459-56264478 MsG0480021282.01.T01:CDS 45.0%
!! CATCAATCTTCTGAAGCCCT+TGG - Chr4:56264444-56264463 None:intergenic 45.0%
!! TCAATGCTGGTTCGGGATTT+AGG + Chr4:56264585-56264604 MsG0480021282.01.T01:CDS 45.0%
!! TGGATTTTCGAGGTGGTCTT+GGG - Chr4:56264644-56264663 None:intergenic 45.0%
AAGCTCCACTTGCCTAGCAA+GGG - Chr4:56266185-56266204 None:intergenic 50.0%
ACCTTCCATGCCACCTGAAA+TGG + Chr4:56265995-56266014 MsG0480021282.01.T01:CDS 50.0%
AGAGTTGGCTACAGCCAAGA+AGG + Chr4:56266064-56266083 MsG0480021282.01.T01:CDS 50.0%
ATTCCTTCAAGAAGGGGCGA+AGG + Chr4:56263547-56263566 MsG0480021282.01.T01:CDS 50.0%
CACCAAATTCCCTCCTCCAT+TGG - Chr4:56263870-56263889 None:intergenic 50.0%
CAGATATGCTCCAATGGAGG+AGG + Chr4:56263857-56263876 MsG0480021282.01.T01:CDS 50.0%
CGATACACTGGAGCAAGAGT+TGG + Chr4:56266049-56266068 MsG0480021282.01.T01:CDS 50.0%
CTCCAATGGAGGAGGGAATT+TGG + Chr4:56263865-56263884 MsG0480021282.01.T01:CDS 50.0%
GAACTTCCAGAGTTCTTGGG+GGG + Chr4:56264981-56265000 MsG0480021282.01.T01:CDS 50.0%
GCTGCAAGAGATCTCATCCA+AGG + Chr4:56264424-56264443 MsG0480021282.01.T01:CDS 50.0%
TGACGTTCATCCGCATGACA+CGG + Chr4:56265811-56265830 MsG0480021282.01.T01:CDS 50.0%
TGCTTTCTGACAAGGGACCA+TGG + Chr4:56265036-56265055 MsG0480021282.01.T01:CDS 50.0%
TGTGGGCAGATATGCTCCAA+TGG + Chr4:56263851-56263870 MsG0480021282.01.T01:CDS 50.0%
TTCCATGCCACCTGAAATGG+AGG + Chr4:56265998-56266017 MsG0480021282.01.T01:CDS 50.0%
TTCCGGCAGAATTATGGCCA+TGG + Chr4:56265776-56265795 MsG0480021282.01.T01:CDS 50.0%
! CTTGCTCCAGTGTATCGACA+CGG - Chr4:56266046-56266065 None:intergenic 50.0%
! TCCATTTCAGGTGGCATGGA+AGG - Chr4:56265999-56266018 None:intergenic 50.0%
! TTCCTCCATTTCAGGTGGCA+TGG - Chr4:56266003-56266022 None:intergenic 50.0%
!! CACTTGATGATGCCCTTGCT+AGG + Chr4:56266170-56266189 MsG0480021282.01.T01:CDS 50.0%
!! GCTTACGTGGATTTTCGAGG+TGG - Chr4:56264651-56264670 None:intergenic 50.0%
!! GTGGATTTTCGAGGTGGTCT+TGG - Chr4:56264645-56264664 None:intergenic 50.0%
!! TGGTGCCGATACTATCATGG+AGG + Chr4:56263885-56263904 MsG0480021282.01.T01:CDS 50.0%
CAAGTACCCCCCAAGAACTC+TGG - Chr4:56264990-56265009 None:intergenic 55.0%
GAAGCTCCACTTGCCTAGCA+AGG - Chr4:56266186-56266205 None:intergenic 55.0%
GGGCAGATATGCTCCAATGG+AGG + Chr4:56263854-56263873 MsG0480021282.01.T01:CDS 55.0%
TGATGCCCTTGCTAGGCAAG+TGG + Chr4:56266177-56266196 MsG0480021282.01.T01:CDS 55.0%
! GGTGGTCTTGGGATCAAGGA+AGG - Chr4:56264633-56264652 None:intergenic 55.0%
! TCGAGGTGGTCTTGGGATCA+AGG - Chr4:56264637-56264656 None:intergenic 55.0%
GTGCCTTCGCCCCTTCTTGA+AGG - Chr4:56263553-56263572 None:intergenic 60.0%
! AGAAGGGGCGAAGGCACAAC+AGG + Chr4:56263556-56263575 MsG0480021282.01.T01:CDS 60.0%
! GAAGGGGCGAAGGCACAACA+GGG + Chr4:56263557-56263576 MsG0480021282.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56262965 56266246 56262965 ID=MsG0480021282.01;Name=MsG0480021282.01
Chr4 mRNA 56262965 56266246 56262965 ID=MsG0480021282.01.T01;Parent=MsG0480021282.01;Name=MsG0480021282.01.T01;_AED=0.28;_eAED=0.29;_QI=107|1|0.92|1|1|1|13|0|562
Chr4 exon 56262965 56263120 56262965 ID=MsG0480021282.01.T01:exon:6885;Parent=MsG0480021282.01.T01
Chr4 exon 56263457 56263703 56263457 ID=MsG0480021282.01.T01:exon:6886;Parent=MsG0480021282.01.T01
Chr4 exon 56263807 56263906 56263807 ID=MsG0480021282.01.T01:exon:6887;Parent=MsG0480021282.01.T01
Chr4 exon 56264020 56264286 56264020 ID=MsG0480021282.01.T01:exon:6888;Parent=MsG0480021282.01.T01
Chr4 exon 56264403 56264480 56264403 ID=MsG0480021282.01.T01:exon:6889;Parent=MsG0480021282.01.T01
Chr4 exon 56264563 56264664 56264563 ID=MsG0480021282.01.T01:exon:6890;Parent=MsG0480021282.01.T01
Chr4 exon 56264774 56264823 56264774 ID=MsG0480021282.01.T01:exon:6891;Parent=MsG0480021282.01.T01
Chr4 exon 56264980 56265079 56264980 ID=MsG0480021282.01.T01:exon:6892;Parent=MsG0480021282.01.T01
Chr4 exon 56265171 56265263 56265171 ID=MsG0480021282.01.T01:exon:6893;Parent=MsG0480021282.01.T01
Chr4 exon 56265350 56265409 56265350 ID=MsG0480021282.01.T01:exon:6894;Parent=MsG0480021282.01.T01
Chr4 exon 56265485 56265593 56265485 ID=MsG0480021282.01.T01:exon:6895;Parent=MsG0480021282.01.T01
Chr4 exon 56265730 56266085 56265730 ID=MsG0480021282.01.T01:exon:6896;Parent=MsG0480021282.01.T01
Chr4 exon 56266169 56266246 56266169 ID=MsG0480021282.01.T01:exon:6897;Parent=MsG0480021282.01.T01
Chr4 five_prime_UTR 56262965 56263071 56262965 ID=MsG0480021282.01.T01:five_prime_utr;Parent=MsG0480021282.01.T01
Chr4 CDS 56263072 56263120 56263072 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56263457 56263703 56263457 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56263807 56263906 56263807 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56264020 56264286 56264020 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56264403 56264480 56264403 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56264563 56264664 56264563 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56264774 56264823 56264774 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56264980 56265079 56264980 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56265171 56265263 56265171 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56265350 56265409 56265350 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56265485 56265593 56265485 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56265730 56266085 56265730 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Chr4 CDS 56266169 56266246 56266169 ID=MsG0480021282.01.T01:cds;Parent=MsG0480021282.01.T01
Gene Sequence

>MsG0480021282.01.T01

ATGTGTGACACTATGTCTGGACCTATTACTATTGATCAACCTGTTAAAGGTCTTGAGATTGAATATTTGGAGGATGAAAAGAGAACAAGGCTTGGATCCTTAAAGAAGGCAGCAATAAGTGCATCTTCTAAGTTCAAACATTCCTTCAAGAAGGGGCGAAGGCACAACAGGGTTATATCTGTCATCGAGGATGAAATCGATACAGAAGAGTTGCAGGCAATTGACGCTTTTCGTCAAACACTTATCCTAGAAGAACTATTACCCTCAAAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAGGAAGTTTGACATTGAAAAAACAAAGCAAATGTGGGCAGATATGCTCCAATGGAGGAGGGAATTTGGTGCCGATACTATCATGGAGGATTTTGAATTCGAGGAGATAGACGAAGTTCTAAAATACTACCCTCAAGGAACACATGGAGTTGATAAGGATGGAAGACCTGTTTACATAGAAAGGTTGGGTTTGGTTGACTCAAACAAACTGATGCAAGTAACGACTATGGACCGATATCTTAAGTACCATGTACGAGAGTTTGAGAAGACATCCAATGTTAAGATGCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATCTTGGATGTCCAAGGAGTGGGTCTCAAAAGTATGAATAAAGCTGCAAGAGATCTCATCCAAGGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGTCCTTGAACCGTATGTTCATCATCAATGCTGGTTCGGGATTTAGGATTTTGTGGAACACAGTTAAGTCCTTCCTTGATCCCAAGACCACCTCGAAAATCCACGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATCGATGCCAGTGAACTTCCAGAGTTCTTGGGGGGTACTTGTACTTGTGCAGACAAAGGTGGTTGCATGCTTTCTGACAAGGGACCATGGAATGATCCAGAAATCTTGAAGATGGTTCAAAACGGTGAAGCAAAATGCAGAAGGAAAACTTTATCCGAAGTTGAGGAGAAAACAATCGTCGAAGACGAAGGAGTGTGTCAAAAGGGATGTGATTCTTTCAACAAAGAATACGTTCTCGAGGAGGCATGCCATGCTATAGCAGAAGTAGCAAAACAATGTAATGCATATCAGTTCGACACCTTGGTCTCAATGAATGACAAACAAGTATCTTGGGAGGAATCAGTACAAAATGATCAAAAGGCACTTTCTAAAAATTGCTTTGGTAACAATGTATGCAAGAATGGATTTAGAAATCAATTTTCCGGCAGAATTATGGCCATGGTTTTGGGAATCATGACGTTCATCCGCATGACACGGAGTATACCAACAAAAATGACTGCAATTGCATTGTATGGTAACTCGGTATATATTGATGGCAATATGGTGAAAGCAGCACCTGTCATTTCCGTTGATGATCACATGGCTCTAATGAAGCGCATGACCGATCTAGAAGAGAAGGTGAATATTCTCAGCATGAGACCTTCCATGCCACCTGAAATGGAGGAATTGCTCAACAGTACTCTAAACCGTGTCGATACACTGGAGCAAGAGTTGGCTACAGCCAAGAAGGCACTTGATGATGCCCTTGCTAGGCAAGTGGAGCTTCAATCACATATCGACAAAGAAAAAAGAAGAAAAAGTTGGTAG
Protein sequence

>MsG0480021282.01.T01

MCDTMSGPITIDQPVKGLEIEYLEDEKRTRLGSLKKAAISASSKFKHSFKKGRRHNRVISVIEDEIDTEELQAIDAFRQTLILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLQWRREFGADTIMEDFEFEEIDEVLKYYPQGTHGVDKDGRPVYIERLGLVDSNKLMQVTTMDRYLKYHVREFEKTSNVKMPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQGLQKIDGDNYPESLNRMFIINAGSGFRILWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEAKCRRKTLSEVEEKTIVEDEGVCQKGCDSFNKEYVLEEACHAIAEVAKQCNAYQFDTLVSMNDKQVSWEESVQNDQKALSKNCFGNNVCKNGFRNQFSGRIMAMVLGIMTFIRMTRSIPTKMTAIALYGNSVYIDGNMVKAAPVISVDDHMALMKRMTDLEEKVNILSMRPSMPPEMEELLNSTLNRVDTLEQELATAKKALDDALARQVELQSHIDKEKRRKSW*