AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021461.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021461.01.T01 MTR_4g073650 87.892 223 9 1 1 205 1 223 1.51e-138 386
MsG0480021461.01.T01 MTR_3g463900 66.242 157 52 1 41 197 47 202 3.26e-72 218
MsG0480021461.01.T01 MTR_3g070500 63.694 157 56 1 40 196 76 231 1.10e-67 207
MsG0480021461.01.T01 MTR_7g116340 57.051 156 66 1 41 196 17 171 1.23e-59 184
MsG0480021461.01.T01 MTR_4g075290 57.051 156 66 1 41 196 17 171 1.56e-58 182
MsG0480021461.01.T01 MTR_1g085560 57.862 159 59 2 40 197 97 248 7.58e-58 183
MsG0480021461.01.T01 MTR_8g079690 58.974 156 63 1 42 196 18 173 2.81e-57 184
MsG0480021461.01.T01 MTR_3g117750 57.419 155 65 1 42 196 26 179 6.40e-57 178
MsG0480021461.01.T01 MTR_4g086760 56.790 162 69 1 42 202 18 179 1.51e-56 181
MsG0480021461.01.T01 MTR_4g086760 56.790 162 69 1 42 202 18 179 2.08e-56 182
MsG0480021461.01.T01 MTR_4g086760 56.790 162 69 1 42 202 18 179 2.25e-56 182
MsG0480021461.01.T01 MTR_1g117010 55.769 156 62 1 42 197 94 242 8.43e-55 175
MsG0480021461.01.T01 MTR_1g117010 55.769 156 62 1 42 197 94 242 8.43e-55 175
MsG0480021461.01.T01 MTR_7g110980 53.797 158 66 1 40 197 108 258 2.00e-54 174
MsG0480021461.01.T01 MTR_7g095750 57.862 159 65 2 43 200 22 179 1.15e-53 181
MsG0480021461.01.T01 MTR_3g070500 65.487 113 39 0 40 152 76 188 1.32e-49 160
MsG0480021461.01.T01 MTR_8g040180 49.045 157 77 2 41 196 31 185 3.11e-47 154
MsG0480021461.01.T01 MTR_3g107660 47.403 154 79 2 43 195 25 177 3.29e-36 134
MsG0480021461.01.T01 MTR_1g011980 49.351 154 75 3 43 195 22 173 3.97e-36 134
MsG0480021461.01.T01 MTR_3g070500 61.111 90 35 0 40 129 76 165 3.16e-34 120
MsG0480021461.01.T01 MTR_3g070500 63.529 85 31 0 40 124 76 160 3.72e-34 119
MsG0480021461.01.T01 MTR_2g085075 42.593 162 80 4 39 199 468 617 2.53e-32 122
MsG0480021461.01.T01 MTR_7g105220 41.353 133 66 3 39 170 16 137 8.90e-28 103
MsG0480021461.01.T01 MTR_8g036015 44.526 137 64 4 39 174 7 132 1.37e-27 102
MsG0480021461.01.T01 MTR_2g023120 40.645 155 75 6 21 173 3 142 4.32e-26 105
MsG0480021461.01.T01 MTR_5g015500 41.830 153 77 4 39 190 311 452 6.10e-26 104
MsG0480021461.01.T01 MTR_5g015500 41.830 153 77 4 39 190 351 492 7.60e-26 104
MsG0480021461.01.T01 MTR_3g085705 40.678 118 58 2 67 184 20 125 1.95e-21 85.9
MsG0480021461.01.T01 MTR_6g084140 33.951 162 87 4 38 190 23 173 1.67e-19 86.3
MsG0480021461.01.T01 MTR_6g084140 34.568 162 86 5 38 190 6 156 4.03e-19 85.1
MsG0480021461.01.T01 MTR_8g442420 33.951 162 87 5 38 190 6 156 6.05e-18 81.6
MsG0480021461.01.T01 MTR_2g461260 28.736 174 85 7 39 188 89 247 2.82e-12 64.7
MsG0480021461.01.T01 MTR_1g094065 33.775 151 72 7 31 174 76 205 4.14e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021461.01.T01 AT4G34960 72.646 223 42 3 1 204 1 223 1.81e-108 310
MsG0480021461.01.T01 AT2G29960 68.354 158 49 1 40 197 44 200 3.59e-74 223
MsG0480021461.01.T01 AT2G29960 68.354 158 49 1 40 197 44 200 3.59e-74 223
MsG0480021461.01.T01 AT4G34960 67.836 171 36 3 1 152 1 171 1.23e-71 215
MsG0480021461.01.T01 AT5G58710 63.924 158 56 1 40 197 47 203 2.63e-70 213
MsG0480021461.01.T01 AT2G29960 64.557 158 45 2 40 197 44 190 1.68e-67 205
MsG0480021461.01.T01 AT3G55920 61.392 158 60 1 39 196 70 226 8.32e-65 200
MsG0480021461.01.T01 AT5G13120 58.125 160 60 1 41 200 102 254 1.13e-61 192
MsG0480021461.01.T01 AT2G21130 60.256 156 61 1 41 196 18 172 1.27e-61 190
MsG0480021461.01.T01 AT5G13120 58.125 160 60 1 41 200 106 258 1.29e-61 192
MsG0480021461.01.T01 AT3G56070 57.051 156 66 1 41 196 17 171 1.29e-60 187
MsG0480021461.01.T01 AT3G56070 57.051 156 66 1 41 196 17 171 1.29e-60 187
MsG0480021461.01.T01 AT4G38740 57.692 156 65 1 41 196 17 171 1.43e-60 187
MsG0480021461.01.T01 AT2G15790 60.127 158 62 1 42 198 18 175 2.91e-59 190
MsG0480021461.01.T01 AT4G34870 56.962 158 67 1 39 196 15 171 5.66e-59 183
MsG0480021461.01.T01 AT2G16600 56.688 157 67 1 40 196 17 172 1.16e-57 180
MsG0480021461.01.T01 AT3G62030 55.414 157 63 1 41 197 107 256 5.22e-56 178
MsG0480021461.01.T01 AT3G62030 55.414 157 63 1 41 197 108 257 5.37e-56 178
MsG0480021461.01.T01 AT3G62030 55.414 157 63 1 41 197 161 310 1.49e-55 179
MsG0480021461.01.T01 AT3G63400 56.774 155 65 2 43 196 22 175 7.10e-52 171
MsG0480021461.01.T01 AT3G63400 56.774 155 65 2 43 196 22 175 4.20e-50 171
MsG0480021461.01.T01 AT3G63400 56.774 155 65 2 43 196 22 175 4.20e-50 171
MsG0480021461.01.T01 AT3G63400 56.774 155 65 2 43 196 22 175 4.20e-50 171
MsG0480021461.01.T01 AT2G38730 47.134 157 80 2 41 196 45 199 1.45e-44 147
MsG0480021461.01.T01 AT2G16600 49.045 157 57 2 40 196 17 150 1.10e-42 141
MsG0480021461.01.T01 AT4G32420 48.366 153 77 2 44 195 23 174 1.78e-36 135
MsG0480021461.01.T01 AT4G32420 48.366 153 77 2 44 195 23 174 1.78e-36 135
MsG0480021461.01.T01 AT4G32420 48.366 153 77 2 44 195 23 174 1.78e-36 135
MsG0480021461.01.T01 AT4G32420 48.366 153 77 2 44 195 23 174 1.78e-36 135
MsG0480021461.01.T01 AT4G32420 50.000 132 65 1 44 174 23 154 2.53e-35 132
MsG0480021461.01.T01 AT3G22920 45.283 159 76 5 41 196 17 167 2.18e-33 119
MsG0480021461.01.T01 AT3G44600 41.975 162 81 4 39 199 482 631 2.23e-31 120
MsG0480021461.01.T01 AT2G36130 42.105 133 65 3 39 170 16 137 9.99e-29 105
MsG0480021461.01.T01 AT1G01940 45.255 137 63 4 39 174 7 132 2.36e-28 104
MsG0480021461.01.T01 AT4G33060 45.312 128 57 4 39 164 19 135 9.22e-28 109
MsG0480021461.01.T01 AT5G67530 42.308 156 78 4 39 193 350 494 2.97e-27 108
MsG0480021461.01.T01 AT1G53720 33.951 162 87 5 38 190 6 156 1.26e-18 82.8
MsG0480021461.01.T01 AT1G53720 34.568 162 86 6 38 190 6 156 6.90e-18 81.6
MsG0480021461.01.T01 AT5G35100 32.298 161 69 7 39 173 83 229 6.06e-11 60.8
MsG0480021461.01.T01 AT5G35100 32.298 161 69 7 39 173 83 229 6.06e-11 60.8

Find 65 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTCCAGACGAGAATTTC+AGG 0.190065 4:+58135849 MsG0480021461.01.T01:CDS
CGCATTCTCTGCTTCTAAAT+TGG 0.208778 4:+58133194 MsG0480021461.01.T01:CDS
ACTTTGTTAGAACATGATTC+TGG 0.251503 4:+58136479 MsG0480021461.01.T01:three_prime_UTR
GTCCAACCAAATCATTGTTT+TGG 0.287921 4:-58136458 None:intergenic
CCATTTCATCGGATAGTATC+TGG 0.290312 4:+58135758 MsG0480021461.01.T01:CDS
CATTGCTTCAGTACAGTATT+TGG 0.299307 4:-58133097 None:intergenic
CTTCCTCGGTTTCCCACTAT+AGG 0.329905 4:-58136357 None:intergenic
CGATTACCAAAACAATGATT+TGG 0.339136 4:+58136452 MsG0480021461.01.T01:three_prime_UTR
AGGATCGTGATTGGATTATA+TGG 0.372648 4:+58135249 MsG0480021461.01.T01:CDS
AACTGTGAACCGTTGGAATC+AGG 0.372964 4:-58136063 None:intergenic
GATTGCAGGCGTTGTCTCTA+TGG 0.374529 4:+58136029 MsG0480021461.01.T01:intron
TCCTCGTCCCACTTGCTCTT+CGG 0.389846 4:-58136410 None:intergenic
CCAGATACTATCCGATGAAA+TGG 0.402366 4:-58135758 None:intergenic
CACTTTGAAGTTGCAGTGCC+TGG 0.403504 4:-58136678 None:intergenic
GTGTATACTTTCTCAAATCA+TGG 0.406177 4:+58136532 MsG0480021461.01.T01:three_prime_UTR
CGAAACTTTGTTATTCTCCA+TGG 0.429189 4:-58133047 None:intergenic
GTTGTCTCTATGGCTAATTC+AGG 0.429788 4:+58136039 MsG0480021461.01.T01:CDS
TACAAATTTGATAGGTTGGA+TGG 0.436162 4:+58136263 MsG0480021461.01.T01:intron
TACCAAAACAATGATTTGGT+TGG 0.439351 4:+58136456 MsG0480021461.01.T01:three_prime_UTR
GGGTCAAGATGTAGCACGTT+TGG 0.440530 4:-58136571 None:intergenic
CTTTGTTAGAACATGATTCT+GGG 0.446354 4:+58136480 MsG0480021461.01.T01:three_prime_UTR
AAAGCATCCGAATCTATTTA+CGG 0.448536 4:+58135821 MsG0480021461.01.T01:CDS
TCTGCAGGTAGGATCGTGAT+TGG 0.453737 4:+58135240 MsG0480021461.01.T01:CDS
AGAGAACAAGGAGGAGAATG+AGG 0.453892 4:-58133155 None:intergenic
GGTGTAAAACTTCATTATAA+AGG 0.459312 4:+58135731 MsG0480021461.01.T01:CDS
TTAATCCTGAAATTCTCGTC+TGG 0.460676 4:-58135854 None:intergenic
CCATATTGTGTAGGGGAGAA+AGG 0.471502 4:+58135695 MsG0480021461.01.T01:intron
AAGGTAGTGATTGCGGACTC+TGG 0.481336 4:+58136380 MsG0480021461.01.T01:CDS
AGGATTAAACATTCTCATGC+TGG 0.482834 4:+58135869 MsG0480021461.01.T01:CDS
TGTCAACATTGAAAAGGTAA+AGG 0.485245 4:-58133004 None:intergenic
CGGTATGCAATAACTTCTGC+AGG 0.499826 4:+58135225 MsG0480021461.01.T01:CDS
CTCCATGGAAGGTAGCTTAG+TGG 0.505850 4:-58133032 None:intergenic
TCCATGGAAGGTAGCTTAGT+GGG 0.507399 4:-58133031 None:intergenic
GCAATCACTACCTTCTTCCT+CGG 0.508012 4:-58136371 None:intergenic
GGTGCCACCGTAAATAGATT+CGG 0.518595 4:-58135828 None:intergenic
GATACCGTATTTGCAATTGA+AGG 0.526063 4:+58136323 MsG0480021461.01.T01:CDS
GGTTTGTGTCAACATTGAAA+AGG 0.528130 4:-58133010 None:intergenic
ACCCACTAAGCTACCTTCCA+TGG 0.533470 4:+58133030 MsG0480021461.01.T01:five_prime_UTR
GTTTCAAATCATGATTCGAT+AGG 0.539089 4:+58136502 MsG0480021461.01.T01:three_prime_UTR
TGGCAAGGTTGTTCAAGGCA+TGG 0.547061 4:+58136301 MsG0480021461.01.T01:CDS
ATACCGTATTTGCAATTGAA+GGG 0.553217 4:+58136324 MsG0480021461.01.T01:CDS
CCTGAAATTCTCGTCTGGAA+AGG 0.563449 4:-58135849 None:intergenic
TAATGAAAATTGAGAGAACA+AGG 0.563578 4:-58133167 None:intergenic
GAGAGATACCGAAGAGCAAG+TGG 0.564077 4:+58136402 MsG0480021461.01.T01:CDS
ATAAAGGAACACCATTTCAT+CGG 0.570046 4:+58135747 MsG0480021461.01.T01:CDS
GGAGATATTGTTCATCGTGA+TGG 0.573728 4:+58135797 MsG0480021461.01.T01:CDS
ACCGAAGAGCAAGTGGGACG+AGG 0.574878 4:+58136409 MsG0480021461.01.T01:CDS
TACCGTATTTGCAATTGAAG+GGG 0.577885 4:+58136325 MsG0480021461.01.T01:CDS
TAGTGGGAAACCGAGGAAGA+AGG 0.584123 4:+58136361 MsG0480021461.01.T01:CDS
ACTTTGTTATTCTCCATGGA+AGG 0.591692 4:-58133043 None:intergenic
GAGAAAGGCGAGAGTGCAAG+TGG 0.602323 4:+58135710 MsG0480021461.01.T01:CDS
GGGGAGCTGGAACCTATAGT+GGG 0.603118 4:+58136345 MsG0480021461.01.T01:CDS
TTACCACAGTGAAGGCCAGT+TGG 0.614315 4:+58136091 MsG0480021461.01.T01:CDS
ATGCAATAACTTCTGCAGGT+AGG 0.633515 4:+58135229 MsG0480021461.01.T01:CDS
AATTCAGGACCTGATTCCAA+CGG 0.636612 4:+58136054 MsG0480021461.01.T01:CDS
TCTATATTACAATATTAACC+AGG 0.638594 4:+58136660 MsG0480021461.01.T01:three_prime_UTR
GAGGAAGAAGGTAGTGATTG+CGG 0.640776 4:+58136373 MsG0480021461.01.T01:CDS
AGGAGGAGAATGAGGAATCG+AGG 0.641912 4:-58133147 None:intergenic
ACCGTATTTGCAATTGAAGG+GGG 0.647013 4:+58136326 MsG0480021461.01.T01:CDS
TGAAAATTGAGAGAACAAGG+AGG 0.658859 4:-58133164 None:intergenic
GAACCTATAGTGGGAAACCG+AGG 0.686763 4:+58136354 MsG0480021461.01.T01:CDS
AGAGATACCGAAGAGCAAGT+GGG 0.699903 4:+58136403 MsG0480021461.01.T01:CDS
GATTGGATTATATGGCCAAG+TGG 0.703755 4:+58135257 MsG0480021461.01.T01:CDS
TTACCAACTGGCCTTCACTG+TGG 0.710194 4:-58136094 None:intergenic
GCATCCGAATCTATTTACGG+TGG 0.747499 4:+58135824 MsG0480021461.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAGTATTTCATTTTATT+AGG + Chr4:58135912-58135931 MsG0480021461.01.T01:intron 10.0%
!! AATTTCATTACAAATTTGAT+AGG + Chr4:58136255-58136274 MsG0480021461.01.T01:intron 15.0%
!!! AGTTTTTGATATTCTTATTA+AGG + Chr4:58133562-58133581 MsG0480021461.01.T01:intron 15.0%
!!! GAAACCAAATATAATAATTT+TGG + Chr4:58134625-58134644 MsG0480021461.01.T01:intron 15.0%
!!! TTTCCTTTTTACTATTAATA+AGG + Chr4:58135200-58135219 MsG0480021461.01.T01:intron 15.0%
!! AAAAAGAAGAAAAAGTTGTT+AGG - Chr4:58135061-58135080 None:intergenic 20.0%
!! ACTGCAATATATATACAAAA+GGG - Chr4:58133233-58133252 None:intergenic 20.0%
!! ATATTTAATGAACAACATGA+AGG - Chr4:58135632-58135651 None:intergenic 20.0%
!! CTCAAAAATGACAAAAAAAA+TGG - Chr4:58135962-58135981 None:intergenic 20.0%
!! TAAAAGAACCTTACTATATT+AGG - Chr4:58134756-58134775 None:intergenic 20.0%
!! TCTATATTACAATATTAACC+AGG + Chr4:58136660-58136679 MsG0480021461.01.T01:three_prime_UTR 20.0%
!! TGCTCCAAAATTATTATATT+TGG - Chr4:58134632-58134651 None:intergenic 20.0%
!! TTAAACTTAAAAGAATGAGT+CGG - Chr4:58134722-58134741 None:intergenic 20.0%
!! TTTATGTTTCTTCTATTGTA+AGG - Chr4:58135346-58135365 None:intergenic 20.0%
!! TTTGATATTCTTATTAAGGT+GGG + Chr4:58133566-58133585 MsG0480021461.01.T01:intron 20.0%
!!! AATTTTGAACAATTTAGACT+CGG + Chr4:58136140-58136159 MsG0480021461.01.T01:intron 20.0%
!!! AGAAGTATGAAATTAGTTAA+TGG + Chr4:58133603-58133622 MsG0480021461.01.T01:intron 20.0%
!!! ATCAGACTCTTATTTATATT+TGG + Chr4:58134603-58134622 MsG0480021461.01.T01:intron 20.0%
!!! CATTTTTTTTGTCATTTTTG+AGG + Chr4:58135960-58135979 MsG0480021461.01.T01:intron 20.0%
!!! GAATTTCATTGATCATTTTT+TGG - Chr4:58136763-58136782 None:intergenic 20.0%
!!! GATAGATTGATAATAGTTTA+AGG + Chr4:58134332-58134351 MsG0480021461.01.T01:intron 20.0%
!!! TCATTTTTTGGTTACAAAAA+TGG - Chr4:58136751-58136770 None:intergenic 20.0%
!!! TTACAATCTACCAATTTTTT+GGG - Chr4:58136595-58136614 None:intergenic 20.0%
!!! TTTTGATATTCTTATTAAGG+TGG + Chr4:58133565-58133584 MsG0480021461.01.T01:intron 20.0%
!!! TTTTTACTATTAATAAGGTG+CGG + Chr4:58135205-58135224 MsG0480021461.01.T01:intron 20.0%
! AAAACTCTATGTGTAATTTC+AGG - Chr4:58135002-58135021 None:intergenic 25.0%
! AAAGTGATGAAGTAAGATAA+AGG + Chr4:58134211-58134230 MsG0480021461.01.T01:intron 25.0%
! AAATGACAAAAAAAATGGTG+AGG - Chr4:58135957-58135976 None:intergenic 25.0%
! AACTTAAGAAAGTAATGCAA+GGG - Chr4:58133422-58133441 None:intergenic 25.0%
! AAGTGATGAAGTAAGATAAA+GGG + Chr4:58134212-58134231 MsG0480021461.01.T01:intron 25.0%
! AATTGTTTCCAGCTTATTAT+GGG + Chr4:58134547-58134566 MsG0480021461.01.T01:intron 25.0%
! ATATATACAAAAGGGTCATA+AGG - Chr4:58133225-58133244 None:intergenic 25.0%
! ATGATCTAATAGAAATGTGA+TGG + Chr4:58134188-58134207 MsG0480021461.01.T01:intron 25.0%
! ATTATCTGATTGGAAATGTA+TGG + Chr4:58134855-58134874 MsG0480021461.01.T01:intron 25.0%
! CAAAATCACTCTCTTAAATA+AGG + Chr4:58134059-58134078 MsG0480021461.01.T01:intron 25.0%
! GAACTAAGAAAATGTATTAG+AGG + Chr4:58133937-58133956 MsG0480021461.01.T01:intron 25.0%
! GACTGCAATATATATACAAA+AGG - Chr4:58133234-58133253 None:intergenic 25.0%
! GCACCTTATTAATAGTAAAA+AGG - Chr4:58135206-58135225 None:intergenic 25.0%
! GGTGTAAAACTTCATTATAA+AGG + Chr4:58135731-58135750 MsG0480021461.01.T01:CDS 25.0%
! TAAACTTCGAGTGTTAAAAT+TGG - Chr4:58134816-58134835 None:intergenic 25.0%
! TAATGAAAATTGAGAGAACA+AGG - Chr4:58133170-58133189 None:intergenic 25.0%
! TAATTGTTTCCAGCTTATTA+TGG + Chr4:58134546-58134565 MsG0480021461.01.T01:intron 25.0%
! TATATACAAAAGGGTCATAA+GGG - Chr4:58133224-58133243 None:intergenic 25.0%
! TATATATATTGCAGTCATTG+TGG + Chr4:58133238-58133257 MsG0480021461.01.T01:intron 25.0%
! TCACATTTCTATTAGATCAT+AGG - Chr4:58134188-58134207 None:intergenic 25.0%
! TCATTACAAATTTGATAGGT+TGG + Chr4:58136259-58136278 MsG0480021461.01.T01:intron 25.0%
!! AAACTGCAATTTTTATTGAC+TGG + Chr4:58135536-58135555 MsG0480021461.01.T01:intron 25.0%
!! AATCATAGTTTCAACTTTTG+AGG - Chr4:58133789-58133808 None:intergenic 25.0%
!! AATGTATTAGAGGATGATTT+TGG + Chr4:58133947-58133966 MsG0480021461.01.T01:intron 25.0%
!! AATTACACATAGAGTTTTCT+TGG + Chr4:58135004-58135023 MsG0480021461.01.T01:intron 25.0%
!! ACACAATGTTTGTTAGAAAA+AGG + Chr4:58135119-58135138 MsG0480021461.01.T01:intron 25.0%
!! TTTTTCTAACAAACATTGTG+TGG - Chr4:58135120-58135139 None:intergenic 25.0%
!!! AAACTATGATTTTGAAAGAG+GGG + Chr4:58133798-58133817 MsG0480021461.01.T01:intron 25.0%
!!! AACACTGATTTTCTTATCAA+AGG - Chr4:58135378-58135397 None:intergenic 25.0%
!!! ACACTGATTTTCTTATCAAA+GGG - Chr4:58135377-58135396 None:intergenic 25.0%
!!! GAAACTATGATTTTGAAAGA+GGG + Chr4:58133797-58133816 MsG0480021461.01.T01:intron 25.0%
!!! GTTACAATCTACCAATTTTT+TGG - Chr4:58136596-58136615 None:intergenic 25.0%
!!! TAATGGATTCAAACTTACAA+CGG + Chr4:58133620-58133639 MsG0480021461.01.T01:intron 25.0%
!!! TACAATCTACCAATTTTTTG+GGG - Chr4:58136594-58136613 None:intergenic 25.0%
!!! TATTGTTGTTGATTTGATGA+TGG + Chr4:58133352-58133371 MsG0480021461.01.T01:intron 25.0%
!!! TGAAACTATGATTTTGAAAG+AGG + Chr4:58133796-58133815 MsG0480021461.01.T01:intron 25.0%
!!! TGTCATTGGTTTTGTATTTT+TGG + Chr4:58135298-58135317 MsG0480021461.01.T01:intron 25.0%
AATACATAATCTCCCTAAGT+TGG + Chr4:58133912-58133931 MsG0480021461.01.T01:intron 30.0%
AATCACTCTCTTAAATAAGG+TGG + Chr4:58134062-58134081 MsG0480021461.01.T01:intron 30.0%
ACCTTACTATATTAGGAATG+TGG - Chr4:58134749-58134768 None:intergenic 30.0%
ACTCTTGTGTATTATCTGAT+TGG + Chr4:58134845-58134864 MsG0480021461.01.T01:intron 30.0%
ACTTTGTTAGAACATGATTC+TGG + Chr4:58136479-58136498 MsG0480021461.01.T01:three_prime_UTR 30.0%
ATAAAGGAACACCATTTCAT+CGG + Chr4:58135747-58135766 MsG0480021461.01.T01:CDS 30.0%
ATACATAATCTCCCTAAGTT+GGG + Chr4:58133913-58133932 MsG0480021461.01.T01:intron 30.0%
ATACCGTATTTGCAATTGAA+GGG + Chr4:58136324-58136343 MsG0480021461.01.T01:CDS 30.0%
ATGCTTAACGATTATAGCTA+TGG + Chr4:58134162-58134181 MsG0480021461.01.T01:intron 30.0%
CAACTTAAGAAAGTAATGCA+AGG - Chr4:58133423-58133442 None:intergenic 30.0%
CAATGTCAATGTTGTTAAGT+TGG + Chr4:58133474-58133493 MsG0480021461.01.T01:intron 30.0%
CGATTACCAAAACAATGATT+TGG + Chr4:58136452-58136471 MsG0480021461.01.T01:three_prime_UTR 30.0%
CTTTGTTAGAACATGATTCT+GGG + Chr4:58136480-58136499 MsG0480021461.01.T01:three_prime_UTR 30.0%
GAAAAGGTAAAGGAAAAAGT+GGG - Chr4:58132997-58133016 None:intergenic 30.0%
GATAACATGAATAGTGATGA+TGG - Chr4:58136235-58136254 None:intergenic 30.0%
GATATTGATAAACAGCGTTT+AGG + Chr4:58135032-58135051 MsG0480021461.01.T01:intron 30.0%
GTGATTAGATAGTTTGAAGA+CGG + Chr4:58133729-58133748 MsG0480021461.01.T01:intron 30.0%
GTGTATACTTTCTCAAATCA+TGG + Chr4:58136532-58136551 MsG0480021461.01.T01:three_prime_UTR 30.0%
GTTTCAAATCATGATTCGAT+AGG + Chr4:58136502-58136521 MsG0480021461.01.T01:three_prime_UTR 30.0%
TAGACTCATTCTGTAATCAA+AGG - Chr4:58134489-58134508 None:intergenic 30.0%
TAGTTTAGGGATCAAATTGA+TGG + Chr4:58134405-58134424 MsG0480021461.01.T01:intron 30.0%
TGAAAAGGTAAAGGAAAAAG+TGG - Chr4:58132998-58133017 None:intergenic 30.0%
TGTAAAAAGGATTGAGTTAG+TGG + Chr4:58133848-58133867 MsG0480021461.01.T01:intron 30.0%
TGTCAACATTGAAAAGGTAA+AGG - Chr4:58133007-58133026 None:intergenic 30.0%
TTCCATATCAACTGCATATT+GGG + Chr4:58134911-58134930 MsG0480021461.01.T01:intron 30.0%
TTGATATGGAAATCAAAGGT+GGG - Chr4:58134902-58134921 None:intergenic 30.0%
TTTCCATATCAACTGCATAT+TGG + Chr4:58134910-58134929 MsG0480021461.01.T01:intron 30.0%
! AAAGCATCCGAATCTATTTA+CGG + Chr4:58135821-58135840 MsG0480021461.01.T01:CDS 30.0%
! CAAAACAGAAAAGAGTATGA+TGG - Chr4:58134290-58134309 None:intergenic 30.0%
! TACAAATTTGATAGGTTGGA+TGG + Chr4:58136263-58136282 MsG0480021461.01.T01:intron 30.0%
! TGTTTGTTAGAAAAAGGATG+AGG + Chr4:58135125-58135144 MsG0480021461.01.T01:intron 30.0%
! TTAAGAGAGTGATTTTGTAG+AGG - Chr4:58134056-58134075 None:intergenic 30.0%
! TTTTCTTGGAGGAATTTTCA+GGG - Chr4:58133691-58133710 None:intergenic 30.0%
!! TAAACTTGCTTCTTTTGTTG+TGG + Chr4:58134676-58134695 MsG0480021461.01.T01:intron 30.0%
!! TACCAAAACAATGATTTGGT+TGG + Chr4:58136456-58136475 MsG0480021461.01.T01:three_prime_UTR 30.0%
!!! AATCATTGTTTTGGTAATCG+TGG - Chr4:58136452-58136471 None:intergenic 30.0%
!!! TGAATATGATGGGTTGATTT+TGG - Chr4:58134515-58134534 None:intergenic 30.0%
AAAAACTGTGGGTATGTCAT+TGG + Chr4:58135284-58135303 MsG0480021461.01.T01:intron 35.0%
AAAAGGATTGAGTTAGTGGA+AGG + Chr4:58133852-58133871 MsG0480021461.01.T01:intron 35.0%
AAAGAAAAACTGTGAACCGT+TGG - Chr4:58136073-58136092 None:intergenic 35.0%
AAAGGATTGAGTTAGTGGAA+GGG + Chr4:58133853-58133872 MsG0480021461.01.T01:intron 35.0%
AATGTATCTTCCTACATGAC+AGG - Chr4:58136194-58136213 None:intergenic 35.0%
AATTAGTGCATGGACCAAAT+GGG - Chr4:58135666-58135685 None:intergenic 35.0%
ACATCTTGACCCCAAAAAAT+TGG + Chr4:58136582-58136601 MsG0480021461.01.T01:three_prime_UTR 35.0%
ACTATCTAATCACTGCAATG+TGG - Chr4:58133722-58133741 None:intergenic 35.0%
AGGATCGTGATTGGATTATA+TGG + Chr4:58135249-58135268 MsG0480021461.01.T01:CDS 35.0%
AGGATTAAACATTCTCATGC+TGG + Chr4:58135869-58135888 MsG0480021461.01.T01:CDS 35.0%
AGGCGCATACAAAATATAGT+GGG - Chr4:58134781-58134800 None:intergenic 35.0%
AGTGCAAACAGTGAATATGA+TGG - Chr4:58134526-58134545 None:intergenic 35.0%
ATGTATGTCGCAATAGCAAT+TGG - Chr4:58135092-58135111 None:intergenic 35.0%
ATTTGGTCCATGCACTAATT+AGG + Chr4:58135666-58135685 MsG0480021461.01.T01:intron 35.0%
CATTGCTTCAGTACAGTATT+TGG - Chr4:58133100-58133119 None:intergenic 35.0%
CTGAAAATTCCTCCAAGAAA+AGG + Chr4:58133690-58133709 MsG0480021461.01.T01:intron 35.0%
GATACCGTATTTGCAATTGA+AGG + Chr4:58136323-58136342 MsG0480021461.01.T01:CDS 35.0%
GCCACATTCCTAATATAGTA+AGG + Chr4:58134745-58134764 MsG0480021461.01.T01:intron 35.0%
GGTTTGTGTCAACATTGAAA+AGG - Chr4:58133013-58133032 None:intergenic 35.0%
GTAAAAACATTGTAGTCCCT+GGG + Chr4:58134435-58134454 MsG0480021461.01.T01:intron 35.0%
GTGCAAACAGTGAATATGAT+GGG - Chr4:58134525-58134544 None:intergenic 35.0%
GTTGATATGGAAATCAAAGG+TGG - Chr4:58134903-58134922 None:intergenic 35.0%
TAATTAGTGCATGGACCAAA+TGG - Chr4:58135667-58135686 None:intergenic 35.0%
TACATAATCTCCCTAAGTTG+GGG + Chr4:58133914-58133933 MsG0480021461.01.T01:intron 35.0%
TACCGTATTTGCAATTGAAG+GGG + Chr4:58136325-58136344 MsG0480021461.01.T01:CDS 35.0%
TATTAATCTATCCCCCCATT+TGG + Chr4:58135649-58135668 MsG0480021461.01.T01:intron 35.0%
TGAAAATTGAGAGAACAAGG+AGG - Chr4:58133167-58133186 None:intergenic 35.0%
TGACAAAGTAACTTACCAAC+TGG - Chr4:58136109-58136128 None:intergenic 35.0%
TTAATCCTGAAATTCTCGTC+TGG - Chr4:58135857-58135876 None:intergenic 35.0%
TTGACATTGTCAGTTGAGTT+AGG - Chr4:58133463-58133482 None:intergenic 35.0%
! AAAACTTGCTCTATGATTGC+AGG + Chr4:58136015-58136034 MsG0480021461.01.T01:intron 35.0%
! AACCCAATATGCAGTTGATA+TGG - Chr4:58134916-58134935 None:intergenic 35.0%
! AATGACATACCCACAGTTTT+TGG - Chr4:58135285-58135304 None:intergenic 35.0%
! CTTTTCTTGGAGGAATTTTC+AGG - Chr4:58133692-58133711 None:intergenic 35.0%
! GATAAAGGGTTAGAAGTGTA+TGG + Chr4:58134226-58134245 MsG0480021461.01.T01:intron 35.0%
! GCAGTTGATATGGAAATCAA+AGG - Chr4:58134906-58134925 None:intergenic 35.0%
! GTCCAACCAAATCATTGTTT+TGG - Chr4:58136461-58136480 None:intergenic 35.0%
! GTGATTTTGTAGAGGATGAT+TGG - Chr4:58134048-58134067 None:intergenic 35.0%
! GTTTTTCTTTACCACAGTGA+AGG + Chr4:58136083-58136102 MsG0480021461.01.T01:CDS 35.0%
! TGGTGTGTAACAATTTGCTT+GGG + Chr4:58135889-58135908 MsG0480021461.01.T01:intron 35.0%
!! AAGAGGGGTATCTATACTTT+AGG + Chr4:58133813-58133832 MsG0480021461.01.T01:intron 35.0%
!! ACTTTGTTATTCTCCATGGA+AGG - Chr4:58133046-58133065 None:intergenic 35.0%
!! CGAAACTTTGTTATTCTCCA+TGG - Chr4:58133050-58133069 None:intergenic 35.0%
!! GATGATGGATGAATCTGTTA+TGG + Chr4:58133367-58133386 MsG0480021461.01.T01:intron 35.0%
!! TTTGCCTTTTCTGATGATGT+AGG + Chr4:58134953-58134972 MsG0480021461.01.T01:intron 35.0%
!!! AATTTTAGAGCTTTGTGCAC+AGG + Chr4:58135578-58135597 MsG0480021461.01.T01:CDS 35.0%
!!! AGTATCTGGTTTTGTGATTC+AGG + Chr4:58135772-58135791 MsG0480021461.01.T01:CDS 35.0%
!!! AGTTTCAACTTTTGAGGCAT+AGG - Chr4:58133783-58133802 None:intergenic 35.0%
!!! GTATCTGGTTTTGTGATTCA+GGG + Chr4:58135773-58135792 MsG0480021461.01.T01:CDS 35.0%
!!! TGTTTTGGTAATCGTGGTTT+TGG - Chr4:58136446-58136465 None:intergenic 35.0%
AAGTTGTGTGAGTGTCTGTA+AGG + Chr4:58133437-58133456 MsG0480021461.01.T01:intron 40.0%
AATTCAGGACCTGATTCCAA+CGG + Chr4:58136054-58136073 MsG0480021461.01.T01:CDS 40.0%
ACCGTATTTGCAATTGAAGG+GGG + Chr4:58136326-58136345 MsG0480021461.01.T01:CDS 40.0%
AGAAGAGAGAGCAGTAGTTT+AGG + Chr4:58134391-58134410 MsG0480021461.01.T01:intron 40.0%
AGGAAATGCCCATAATAAGC+TGG - Chr4:58134558-58134577 None:intergenic 40.0%
AGTCATTGTGGATCTGATCT+GGG + Chr4:58133250-58133269 MsG0480021461.01.T01:intron 40.0%
ATGCAATAACTTCTGCAGGT+AGG + Chr4:58135229-58135248 MsG0480021461.01.T01:CDS 40.0%
ATTAGTGCATGGACCAAATG+GGG - Chr4:58135665-58135684 None:intergenic 40.0%
CAACCTTGCCAAAAACAACA+TGG - Chr4:58136292-58136311 None:intergenic 40.0%
CAAGTGGTACCAAAAACTGT+GGG + Chr4:58135273-58135292 MsG0480021461.01.T01:CDS 40.0%
CAGGCGCATACAAAATATAG+TGG - Chr4:58134782-58134801 None:intergenic 40.0%
CCAGATACTATCCGATGAAA+TGG - Chr4:58135761-58135780 None:intergenic 40.0%
CCATTTCATCGGATAGTATC+TGG + Chr4:58135758-58135777 MsG0480021461.01.T01:CDS 40.0%
CGCATTCTCTGCTTCTAAAT+TGG + Chr4:58133194-58133213 MsG0480021461.01.T01:CDS 40.0%
CGTAAAAACATTGTAGTCCC+TGG + Chr4:58134434-58134453 MsG0480021461.01.T01:intron 40.0%
GAACACTCCTAATTAGTGCA+TGG - Chr4:58135676-58135695 None:intergenic 40.0%
GAAGAGAGAGCAGTAGTTTA+GGG + Chr4:58134392-58134411 MsG0480021461.01.T01:intron 40.0%
GAGTGTTCCATATTGTGTAG+GGG + Chr4:58135688-58135707 MsG0480021461.01.T01:intron 40.0%
GATTGGATTATATGGCCAAG+TGG + Chr4:58135257-58135276 MsG0480021461.01.T01:CDS 40.0%
GGAGATATTGTTCATCGTGA+TGG + Chr4:58135797-58135816 MsG0480021461.01.T01:CDS 40.0%
GGCGCATACAAAATATAGTG+GGG - Chr4:58134780-58134799 None:intergenic 40.0%
GTTGTCTCTATGGCTAATTC+AGG + Chr4:58136039-58136058 MsG0480021461.01.T01:CDS 40.0%
TAGAAGGATGTGGCATCAAA+CGG + Chr4:58134253-58134272 MsG0480021461.01.T01:intron 40.0%
TCCCCCTTCAATTGCAAATA+CGG - Chr4:58136330-58136349 None:intergenic 40.0%
TCTCTCAGCTTTCTCATCAA+CGG + Chr4:58135457-58135476 MsG0480021461.01.T01:intron 40.0%
TCTGCCTACATCATCAGAAA+AGG - Chr4:58134960-58134979 None:intergenic 40.0%
TTATCATTTACTCGAGCTCC+TGG - Chr4:58133657-58133676 None:intergenic 40.0%
TTCTTAGTTCCCCCAACTTA+GGG - Chr4:58133927-58133946 None:intergenic 40.0%
TTTCTTAGTTCCCCCAACTT+AGG - Chr4:58133928-58133947 None:intergenic 40.0%
! AAAATTGGTGCTCTTAACGC+AGG - Chr4:58134801-58134820 None:intergenic 40.0%
! ACATAATCTCCCTAAGTTGG+GGG + Chr4:58133915-58133934 MsG0480021461.01.T01:intron 40.0%
! AGAAGTGTATGGCTAGTAGA+AGG + Chr4:58134237-58134256 MsG0480021461.01.T01:intron 40.0%
! ATGTGGCAATGTCCTTTTCT+TGG - Chr4:58133705-58133724 None:intergenic 40.0%
! CTGGTGTGTAACAATTTGCT+TGG + Chr4:58135888-58135907 MsG0480021461.01.T01:intron 40.0%
! GCTCGAGTAAATGATAATGC+AGG + Chr4:58133660-58133679 MsG0480021461.01.T01:intron 40.0%
! GGAGTGTTCCATATTGTGTA+GGG + Chr4:58135687-58135706 MsG0480021461.01.T01:intron 40.0%
! GGGGTATCTATACTTTAGGA+CGG + Chr4:58133817-58133836 MsG0480021461.01.T01:intron 40.0%
!! ACTTGCTTCTTTTGTTGTGG+TGG + Chr4:58134679-58134698 MsG0480021461.01.T01:intron 40.0%
!! AGGAGTGTTCCATATTGTGT+AGG + Chr4:58135686-58135705 MsG0480021461.01.T01:intron 40.0%
!! ATCTATACTTTAGGACGGGA+GGG + Chr4:58133822-58133841 MsG0480021461.01.T01:intron 40.0%
!! GGGTATCTATACTTTAGGAC+GGG + Chr4:58133818-58133837 MsG0480021461.01.T01:intron 40.0%
!! TATCTATACTTTAGGACGGG+AGG + Chr4:58133821-58133840 MsG0480021461.01.T01:intron 40.0%
!! TCACAAAACCTCTAAGATGC+AGG - Chr4:58134578-58134597 None:intergenic 40.0%
!!! AGACCATGTTGTTTTTGGCA+AGG + Chr4:58136286-58136305 MsG0480021461.01.T01:CDS 40.0%
!!! GATGGAGACCATGTTGTTTT+TGG + Chr4:58136281-58136300 MsG0480021461.01.T01:CDS 40.0%
!!! GTTTTTGGCAAGGTTGTTCA+AGG + Chr4:58136296-58136315 MsG0480021461.01.T01:CDS 40.0%
AAACAGAGCCTTCGGTTTCA+AGG + Chr4:58134129-58134148 MsG0480021461.01.T01:intron 45.0%
AACTGTGAACCGTTGGAATC+AGG - Chr4:58136066-58136085 None:intergenic 45.0%
ACAACGGTGAAGTGTAAACC+AGG + Chr4:58133636-58133655 MsG0480021461.01.T01:intron 45.0%
AGAGAACAAGGAGGAGAATG+AGG - Chr4:58133158-58133177 None:intergenic 45.0%
AGAGATACCGAAGAGCAAGT+GGG + Chr4:58136403-58136422 MsG0480021461.01.T01:CDS 45.0%
CAGTCATTGTGGATCTGATC+TGG + Chr4:58133249-58133268 MsG0480021461.01.T01:intron 45.0%
CCAAGTGGTACCAAAAACTG+TGG + Chr4:58135272-58135291 MsG0480021461.01.T01:CDS 45.0%
CCATATTGTGTAGGGGAGAA+AGG + Chr4:58135695-58135714 MsG0480021461.01.T01:intron 45.0%
CCTGAAATTCTCGTCTGGAA+AGG - Chr4:58135852-58135871 None:intergenic 45.0%
CCTTTCCAGACGAGAATTTC+AGG + Chr4:58135849-58135868 MsG0480021461.01.T01:CDS 45.0%
CCTTTCTCCCCTACACAATA+TGG - Chr4:58135698-58135717 None:intergenic 45.0%
CGGTATGCAATAACTTCTGC+AGG + Chr4:58135225-58135244 MsG0480021461.01.T01:CDS 45.0%
GAGGAAGAAGGTAGTGATTG+CGG + Chr4:58136373-58136392 MsG0480021461.01.T01:CDS 45.0%
GATTGAGTTAGTGGAAGGGA+TGG + Chr4:58133857-58133876 MsG0480021461.01.T01:intron 45.0%
GCAATCACTACCTTCTTCCT+CGG - Chr4:58136374-58136393 None:intergenic 45.0%
GCATCCGAATCTATTTACGG+TGG + Chr4:58135824-58135843 MsG0480021461.01.T01:CDS 45.0%
GGCAGATGAGAAAACAGAAG+AGG + Chr4:58134974-58134993 MsG0480021461.01.T01:intron 45.0%
GTATGGCTAGTAGAAGGATG+TGG + Chr4:58134243-58134262 MsG0480021461.01.T01:intron 45.0%
TCCATGGAAGGTAGCTTAGT+GGG - Chr4:58133034-58133053 None:intergenic 45.0%
TGAAACCGAAGGCTCTGTTT+GGG - Chr4:58134129-58134148 None:intergenic 45.0%
TGACTGATAGCCTGTCATGT+AGG + Chr4:58136181-58136200 MsG0480021461.01.T01:intron 45.0%
TTAGTGCATGGACCAAATGG+GGG - Chr4:58135664-58135683 None:intergenic 45.0%
TTGAAACCGAAGGCTCTGTT+TGG - Chr4:58134130-58134149 None:intergenic 45.0%
! GGTGCCACCGTAAATAGATT+CGG - Chr4:58135831-58135850 None:intergenic 45.0%
! TAAGTTGGACCCCTTCACTT+GGG + Chr4:58133489-58133508 MsG0480021461.01.T01:intron 45.0%
! TGGCAATGTCCTTTTCTTGG+AGG - Chr4:58133702-58133721 None:intergenic 45.0%
!! TTAAGTTGGACCCCTTCACT+TGG + Chr4:58133488-58133507 MsG0480021461.01.T01:intron 45.0%
!! TTGGAGGAATTTTCAGGGCA+TGG - Chr4:58133686-58133705 None:intergenic 45.0%
!!! CCACAGTTTTTGGTACCACT+TGG - Chr4:58135275-58135294 None:intergenic 45.0%
!!! TCTGGTTTTGTGATTCAGGG+TGG + Chr4:58135776-58135795 MsG0480021461.01.T01:CDS 45.0%
AAGGTAGTGATTGCGGACTC+TGG + Chr4:58136380-58136399 MsG0480021461.01.T01:CDS 50.0%
ACCCACTAAGCTACCTTCCA+TGG + Chr4:58133030-58133049 MsG0480021461.01.T01:five_prime_UTR 50.0%
AGGAGGAGAATGAGGAATCG+AGG - Chr4:58133150-58133169 None:intergenic 50.0%
CTCCATGGAAGGTAGCTTAG+TGG - Chr4:58133035-58133054 None:intergenic 50.0%
CTTCCTCGGTTTCCCACTAT+AGG - Chr4:58136360-58136379 None:intergenic 50.0%
CTTGCTTGCCTTGAAACCGA+AGG - Chr4:58134140-58134159 None:intergenic 50.0%
GAGAGATACCGAAGAGCAAG+TGG + Chr4:58136402-58136421 MsG0480021461.01.T01:CDS 50.0%
GAGTTAGTGGAAGGGATGGA+GGG + Chr4:58133861-58133880 MsG0480021461.01.T01:intron 50.0%
GGGCATTTCCTGCATCTTAG+AGG + Chr4:58134567-58134586 MsG0480021461.01.T01:intron 50.0%
GGGTCAAGATGTAGCACGTT+TGG - Chr4:58136574-58136593 None:intergenic 50.0%
TAGTGCATGGACCAAATGGG+GGG - Chr4:58135663-58135682 None:intergenic 50.0%
TAGTGGGAAACCGAGGAAGA+AGG + Chr4:58136361-58136380 MsG0480021461.01.T01:CDS 50.0%
TCTGCAGGTAGGATCGTGAT+TGG + Chr4:58135240-58135259 MsG0480021461.01.T01:CDS 50.0%
TGAGTTAGTGGAAGGGATGG+AGG + Chr4:58133860-58133879 MsG0480021461.01.T01:intron 50.0%
TGGCAAGGTTGTTCAAGGCA+TGG + Chr4:58136301-58136320 MsG0480021461.01.T01:CDS 50.0%
TTACCACAGTGAAGGCCAGT+TGG + Chr4:58136091-58136110 MsG0480021461.01.T01:CDS 50.0%
TTTGCAATTGAAGGGGGAGC+TGG + Chr4:58136332-58136351 MsG0480021461.01.T01:CDS 50.0%
! GAACCTATAGTGGGAAACCG+AGG + Chr4:58136354-58136373 MsG0480021461.01.T01:CDS 50.0%
! GACGGGAGGGCTTTGTAAAA+AGG + Chr4:58133835-58133854 MsG0480021461.01.T01:intron 50.0%
! GATTGCAGGCGTTGTCTCTA+TGG + Chr4:58136029-58136048 MsG0480021461.01.T01:intron 50.0%
!! CACTTTGAAGTTGCAGTGCC+TGG - Chr4:58136681-58136700 None:intergenic 50.0%
!! TTACCAACTGGCCTTCACTG+TGG - Chr4:58136097-58136116 None:intergenic 50.0%
AACTCACACACGCAACTGCG+AGG - Chr4:58133516-58133535 None:intergenic 55.0%
AACTGCGAGGACCCAAGTGA+AGG - Chr4:58133503-58133522 None:intergenic 55.0%
ACCGAAGGCTCTGTTTGGGA+CGG - Chr4:58134125-58134144 None:intergenic 55.0%
ACGGAAGGCGAGGGAAAGAA+AGG - Chr4:58134106-58134125 None:intergenic 55.0%
ACTGCGAGGACCCAAGTGAA+GGG - Chr4:58133502-58133521 None:intergenic 55.0%
CTTGCAGAAATGCTCGCCCA+GGG - Chr4:58134454-58134473 None:intergenic 55.0%
GGGGAGCTGGAACCTATAGT+GGG + Chr4:58136345-58136364 MsG0480021461.01.T01:CDS 55.0%
TCCGTCCCAAACAGAGCCTT+CGG + Chr4:58134121-58134140 MsG0480021461.01.T01:intron 55.0%
TCCTCGTCCCACTTGCTCTT+CGG - Chr4:58136413-58136432 None:intergenic 55.0%
TCTTGCAGAAATGCTCGCCC+AGG - Chr4:58134455-58134474 None:intergenic 55.0%
TGGAAGGGATGGAGGGCTAT+GGG + Chr4:58133868-58133887 MsG0480021461.01.T01:intron 55.0%
! AAGGCTCTGTTTGGGACGGA+AGG - Chr4:58134121-58134140 None:intergenic 55.0%
! GAGAAAGGCGAGAGTGCAAG+TGG + Chr4:58135710-58135729 MsG0480021461.01.T01:CDS 55.0%
ACCGAAGAGCAAGTGGGACG+AGG + Chr4:58136409-58136428 MsG0480021461.01.T01:CDS 60.0%
CTGCGAGGACCCAAGTGAAG+GGG - Chr4:58133501-58133520 None:intergenic 60.0%
GGAAGGGATGGAGGGCTATG+GGG + Chr4:58133869-58133888 MsG0480021461.01.T01:intron 60.0%
GGGGGAGCTGGAACCTATAG+TGG + Chr4:58136344-58136363 MsG0480021461.01.T01:CDS 60.0%
GTGGAAGGGATGGAGGGCTA+TGG + Chr4:58133867-58133886 MsG0480021461.01.T01:intron 60.0%
! CTGTTTGGGACGGAAGGCGA+GGG - Chr4:58134115-58134134 None:intergenic 60.0%
! TCTGTTTGGGACGGAAGGCG+AGG - Chr4:58134116-58134135 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 58132992 58136785 58132992 ID=MsG0480021461.01;Name=MsG0480021461.01
Chr4 mRNA 58132992 58136785 58132992 ID=MsG0480021461.01.T01;Parent=MsG0480021461.01;Name=MsG0480021461.01.T01;_AED=0.45;_eAED=0.46;_QI=125|0.83|0.85|1|0.83|0.71|7|326|205
Chr4 exon 58132992 58133215 58132992 ID=MsG0480021461.01.T01:exon:19504;Parent=MsG0480021461.01.T01
Chr4 exon 58135222 58135294 58135222 ID=MsG0480021461.01.T01:exon:19505;Parent=MsG0480021461.01.T01
Chr4 exon 58135576 58135599 58135576 ID=MsG0480021461.01.T01:exon:19506;Parent=MsG0480021461.01.T01
Chr4 exon 58135708 58135890 58135708 ID=MsG0480021461.01.T01:exon:19507;Parent=MsG0480021461.01.T01
Chr4 exon 58136037 58136112 58136037 ID=MsG0480021461.01.T01:exon:19508;Parent=MsG0480021461.01.T01
Chr4 exon 58136277 58136726 58136277 ID=MsG0480021461.01.T01:exon:19509;Parent=MsG0480021461.01.T01
Chr4 exon 58136747 58136785 58136747 ID=MsG0480021461.01.T01:exon:19510;Parent=MsG0480021461.01.T01
Chr4 five_prime_UTR 58132992 58133116 58132992 ID=MsG0480021461.01.T01:five_prime_utr;Parent=MsG0480021461.01.T01
Chr4 CDS 58133117 58133215 58133117 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 CDS 58135222 58135294 58135222 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 CDS 58135576 58135599 58135576 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 CDS 58135708 58135890 58135708 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 CDS 58136037 58136112 58136037 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 CDS 58136277 58136439 58136277 ID=MsG0480021461.01.T01:cds;Parent=MsG0480021461.01.T01
Chr4 three_prime_UTR 58136440 58136726 58136440 ID=MsG0480021461.01.T01:three_prime_utr;Parent=MsG0480021461.01.T01
Chr4 three_prime_UTR 58136747 58136785 58136747 ID=MsG0480021461.01.T01:three_prime_utr;Parent=MsG0480021461.01.T01
Gene Sequence

>MsG0480021461.01.T01

ATGCGTAGAGAGATCGCGTTTCTCGCTCAGCCTCGATTCCTCATTCTCCTCCTTGTTCTCTCAATTTTCATTATTTTCGCATTCTCTGCTTCTAAATTGGTGCGGTATGCAATAACTTCTGCAGGTAGGATCGTGATTGGATTATATGGCCAAGTGGTACCAAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGCGAGAGTGCAAGTGGTGTAAAACTTCATTATAAAGGAACACCATTTCATCGGATAGTATCTGGTTTTGTGATTCAGGGTGGAGATATTGTTCATCGTGATGGCAAAGCATCCGAATCTATTTACGGTGGCACCTTTCCAGACGAGAATTTCAGGATTAAACATTCTCATGCTGGCGTTGTCTCTATGGCTAATTCAGGACCTGATTCCAACGGTTCACAGTTTTTCTTTACCACAGTGAAGGCCAGTTGGTTGGATGGAGACCATGTTGTTTTTGGCAAGGTTGTTCAAGGCATGGATACCGTATTTGCAATTGAAGGGGGAGCTGGAACCTATAGTGGGAAACCGAGGAAGAAGGTAGTGATTGCGGACTCTGGAGAGATACCGAAGAGCAAGTGGGACGAGGAAAGTTGA
Protein sequence

>MsG0480021461.01.T01

MRREIAFLAQPRFLILLLVLSIFIIFAFSASKLVRYAITSAGRIVIGLYGQVVPKTVENFRALCTGEKGESASGVKLHYKGTPFHRIVSGFVIQGGDIVHRDGKASESIYGGTFPDENFRIKHSHAGVVSMANSGPDSNGSQFFFTTVKASWLDGDHVVFGKVVQGMDTVFAIEGGAGTYSGKPRKKVVIADSGEIPKSKWDEES*