Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015466.01.T01 | PNX99573.1 | 93.373 | 166 | 7 | 1 | 1 | 166 | 1 | 162 | 8.81E-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015466.01.T01 | Q9SP02 | 79.375 | 160 | 29 | 1 | 5 | 164 | 47 | 202 | 2.27E-91 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015466.01.T01 | A0A2K3N947 | 93.373 | 166 | 7 | 1 | 1 | 166 | 1 | 162 | 4.21e-106 | 309 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0380015466.01 | 0.816037 | 6.798718e-52 | 4.765094e-49 |
| MsG0080048817.01 | MsG0380015466.01 | 0.831937 | 1.257138e-55 | 1.384696e-52 |
| MsG0180000139.01 | MsG0380015466.01 | 0.830204 | 3.350354e-55 | 3.506270e-52 |
| MsG0180000152.01 | MsG0380015466.01 | 0.841390 | 4.892277e-58 | 7.178000e-55 |
| MsG0180000544.01 | MsG0380015466.01 | -0.803853 | 2.858428e-49 | 1.451891e-46 |
| MsG0180000614.01 | MsG0380015466.01 | 0.825807 | 3.832325e-54 | 3.530177e-51 |
| MsG0180001118.01 | MsG0380015466.01 | 0.809862 | 1.534273e-50 | 9.109804e-48 |
| MsG0180001131.01 | MsG0380015466.01 | 0.825503 | 4.523017e-54 | 4.130188e-51 |
| MsG0180001141.01 | MsG0380015466.01 | 0.827640 | 1.399505e-54 | 1.358916e-51 |
| MsG0180001153.01 | MsG0380015466.01 | 0.808468 | 3.051694e-50 | 1.746292e-47 |
| MsG0180001886.01 | MsG0380015466.01 | 0.809877 | 1.522354e-50 | 9.042861e-48 |
| MsG0180002458.01 | MsG0380015466.01 | 0.807554 | 4.777153e-50 | 2.668735e-47 |
| MsG0180002482.01 | MsG0380015466.01 | 0.829874 | 4.031889e-55 | 4.179835e-52 |
| MsG0180003124.01 | MsG0380015466.01 | 0.807264 | 5.503196e-50 | 3.051417e-47 |
| MsG0180003651.01 | MsG0380015466.01 | 0.836917 | 7.064757e-57 | 9.032060e-54 |
| MsG0180003697.01 | MsG0380015466.01 | 0.820357 | 7.157529e-53 | 5.650693e-50 |
| MsG0180003793.01 | MsG0380015466.01 | 0.811151 | 8.081534e-51 | 4.964748e-48 |
| MsG0180004398.01 | MsG0380015466.01 | 0.802127 | 6.502087e-49 | 3.159812e-46 |
| MsG0180004481.01 | MsG0380015466.01 | 0.840684 | 7.498263e-58 | 1.076229e-54 |
| MsG0180004482.01 | MsG0380015466.01 | 0.843073 | 1.753318e-58 | 2.711495e-55 |
| MsG0180004765.01 | MsG0380015466.01 | 0.811391 | 7.165732e-51 | 4.430171e-48 |
| MsG0180004854.01 | MsG0380015466.01 | 0.806440 | 8.216414e-50 | 4.459911e-47 |
| MsG0180005193.01 | MsG0380015466.01 | 0.821815 | 3.304326e-53 | 2.717108e-50 |
| MsG0180005303.01 | MsG0380015466.01 | -0.811238 | 7.738325e-51 | 4.764762e-48 |
| MsG0180005334.01 | MsG0380015466.01 | 0.827996 | 1.148965e-54 | 1.127438e-51 |
| MsG0180005424.01 | MsG0380015466.01 | 0.816170 | 6.349174e-52 | 4.466119e-49 |
| MsG0180005763.01 | MsG0380015466.01 | 0.804887 | 1.740530e-49 | 9.079897e-47 |
| MsG0180006096.01 | MsG0380015466.01 | 0.803976 | 2.695535e-49 | 1.373490e-46 |
| MsG0180006144.01 | MsG0380015466.01 | 0.848670 | 5.286410e-60 | 9.774760e-57 |
| MsG0280006406.01 | MsG0380015466.01 | 0.810061 | 1.390254e-50 | 8.297999e-48 |
| MsG0280010776.01 | MsG0380015466.01 | 0.825526 | 4.467935e-54 | 4.082516e-51 |
| MsG0280010778.01 | MsG0380015466.01 | 0.806672 | 7.341423e-50 | 4.008444e-47 |
| MsG0280011059.01 | MsG0380015466.01 | -0.815593 | 8.539291e-52 | 5.912576e-49 |
| MsG0280011304.01 | MsG0380015466.01 | 0.854100 | 1.540857e-61 | 3.403769e-58 |
| MsG0280011387.01 | MsG0380015466.01 | 0.809399 | 1.929152e-50 | 1.131511e-47 |
| MsG0280011388.01 | MsG0380015466.01 | 0.828407 | 9.148579e-55 | 9.085413e-52 |
| MsG0380011516.01 | MsG0380015466.01 | 0.811085 | 8.350083e-51 | 5.120975e-48 |
| MsG0380011581.01 | MsG0380015466.01 | 0.810516 | 1.108823e-50 | 6.697533e-48 |
| MsG0380011755.01 | MsG0380015466.01 | 0.803112 | 4.071167e-49 | 2.028732e-46 |
| MsG0380011844.01 | MsG0380015466.01 | 0.806082 | 9.777831e-50 | 5.259178e-47 |
| MsG0380012122.01 | MsG0380015466.01 | 0.839168 | 1.862312e-57 | 2.550409e-54 |
| MsG0380012566.01 | MsG0380015466.01 | 0.809294 | 2.031521e-50 | 1.188219e-47 |
| MsG0380012661.01 | MsG0380015466.01 | -0.804188 | 2.434809e-49 | 1.247339e-46 |
| MsG0380013178.01 | MsG0380015466.01 | 0.821754 | 3.412477e-53 | 2.800968e-50 |
| MsG0380015027.01 | MsG0380015466.01 | 0.837223 | 5.901106e-57 | 7.614190e-54 |
| MsG0380015216.01 | MsG0380015466.01 | 0.824744 | 6.835786e-54 | 6.109244e-51 |
| MsG0380015435.01 | MsG0380015466.01 | 0.828626 | 8.098983e-55 | 8.094107e-52 |
| MsG0380015466.01 | MsG0380016004.01 | 0.813591 | 2.369298e-51 | 1.553707e-48 |
| MsG0380015466.01 | MsG0380016191.01 | -0.806279 | 8.885096e-50 | 4.803090e-47 |
| MsG0380015466.01 | MsG0380016505.01 | 0.814235 | 1.708159e-51 | 1.139877e-48 |
| MsG0380015466.01 | MsG0380016560.01 | 0.814053 | 1.874309e-51 | 1.244538e-48 |
| MsG0380015466.01 | MsG0380016671.01 | 0.809253 | 2.073488e-50 | 1.211428e-47 |
| MsG0380015466.01 | MsG0380016886.01 | 0.800007 | 1.763424e-48 | 8.121603e-46 |
| MsG0380015466.01 | MsG0380016910.01 | 0.813081 | 3.065139e-51 | 1.982228e-48 |
| MsG0380015466.01 | MsG0380017198.01 | 0.813644 | 2.305468e-51 | 1.514031e-48 |
| MsG0380015466.01 | MsG0380017258.01 | 0.808418 | 3.127563e-50 | 1.787373e-47 |
| MsG0380015466.01 | MsG0380017263.01 | -0.802507 | 5.429177e-49 | 2.664164e-46 |
| MsG0380015466.01 | MsG0380017461.01 | 0.834136 | 3.567672e-56 | 4.195253e-53 |
| MsG0380015466.01 | MsG0380017498.01 | 0.808609 | 2.847532e-50 | 1.635351e-47 |
| MsG0380015466.01 | MsG0380017746.01 | 0.815889 | 7.334225e-52 | 5.119231e-49 |
| MsG0380015466.01 | MsG0480018110.01 | 0.830782 | 2.419219e-55 | 2.574773e-52 |
| MsG0380015466.01 | MsG0480018124.01 | 0.811706 | 6.123491e-51 | 3.817243e-48 |
| MsG0380015466.01 | MsG0480018159.01 | 0.815592 | 8.544807e-52 | 5.916130e-49 |
| MsG0380015466.01 | MsG0480018214.01 | 0.816685 | 4.869028e-52 | 3.473368e-49 |
| MsG0380015466.01 | MsG0480018477.01 | 0.802460 | 5.550582e-49 | 2.720517e-46 |
| MsG0380015466.01 | MsG0480018894.01 | 0.805597 | 1.236495e-49 | 6.568258e-47 |
| MsG0380015466.01 | MsG0480018906.01 | 0.800160 | 1.641406e-48 | 7.588837e-46 |
| MsG0380015466.01 | MsG0480019380.01 | 0.813565 | 2.399930e-51 | 1.572684e-48 |
| MsG0380015466.01 | MsG0480020136.01 | 0.838780 | 2.345958e-57 | 3.175158e-54 |
| MsG0380015466.01 | MsG0480020874.01 | 0.807907 | 4.019066e-50 | 2.265918e-47 |
| MsG0380015466.01 | MsG0480021056.01 | 0.801128 | 1.041989e-48 | 4.937643e-46 |
| MsG0380015466.01 | MsG0480021448.01 | 0.815857 | 7.455475e-52 | 5.199330e-49 |
| MsG0380015466.01 | MsG0480021453.01 | 0.802872 | 4.564216e-49 | 2.260668e-46 |
| MsG0380015466.01 | MsG0480021768.01 | 0.803222 | 3.864583e-49 | 1.931270e-46 |
| MsG0380015466.01 | MsG0480021776.01 | -0.802206 | 6.262228e-49 | 3.049346e-46 |
| MsG0380015466.01 | MsG0480022035.01 | 0.804250 | 2.363838e-49 | 1.212865e-46 |
| MsG0380015466.01 | MsG0480022052.01 | -0.828645 | 8.014282e-55 | 8.013840e-52 |
| MsG0380015466.01 | MsG0480022222.01 | 0.827084 | 1.901994e-54 | 1.817368e-51 |
| MsG0380015466.01 | MsG0480022223.01 | 0.809850 | 1.543436e-50 | 9.161318e-48 |
| MsG0380015466.01 | MsG0480022768.01 | 0.813055 | 3.106354e-51 | 2.007486e-48 |
| MsG0380015466.01 | MsG0480022795.01 | 0.809594 | 1.751677e-50 | 1.032785e-47 |
| MsG0380015466.01 | MsG0480022877.01 | 0.813900 | 2.025105e-51 | 1.339148e-48 |
| MsG0380015466.01 | MsG0480023814.01 | 0.843673 | 1.212252e-58 | 1.910839e-55 |
| MsG0380015466.01 | MsG0580024051.01 | 0.819118 | 1.373865e-52 | 1.047880e-49 |
| MsG0380015466.01 | MsG0580024161.01 | 0.804536 | 2.061143e-49 | 1.065373e-46 |
| MsG0380015466.01 | MsG0580024390.01 | 0.814469 | 1.516112e-51 | 1.018227e-48 |
| MsG0380015466.01 | MsG0580024495.01 | 0.804657 | 1.944536e-49 | 1.008280e-46 |
| MsG0380015466.01 | MsG0580025135.01 | 0.805853 | 1.092331e-49 | 5.841282e-47 |
| MsG0380015466.01 | MsG0580025467.01 | 0.818806 | 1.617225e-52 | 1.222869e-49 |
| MsG0380015466.01 | MsG0580025756.01 | 0.833174 | 6.206704e-56 | 7.091731e-53 |
| MsG0380015466.01 | MsG0580025936.01 | 0.811774 | 5.917161e-51 | 3.695375e-48 |
| MsG0380015466.01 | MsG0580026301.01 | 0.805308 | 1.421229e-49 | 7.493850e-47 |
| MsG0380015466.01 | MsG0580026718.01 | 0.830452 | 2.914388e-55 | 3.071463e-52 |
| MsG0380015466.01 | MsG0580026777.01 | 0.823910 | 1.074189e-53 | 9.373600e-51 |
| MsG0380015466.01 | MsG0580028044.01 | 0.850237 | 1.933991e-60 | 3.763773e-57 |
| MsG0380015466.01 | MsG0580028418.01 | 0.803711 | 3.059886e-49 | 1.548414e-46 |
| MsG0380015466.01 | MsG0580028901.01 | 0.803695 | 3.083897e-49 | 1.559986e-46 |
| MsG0380015466.01 | MsG0580029279.01 | -0.802236 | 6.173170e-49 | 3.008404e-46 |
| MsG0380015466.01 | MsG0580029717.01 | 0.835036 | 2.120179e-56 | 2.561386e-53 |
| MsG0380015466.01 | MsG0580029924.01 | 0.820278 | 7.463154e-53 | 5.879127e-50 |
| MsG0380015466.01 | MsG0580029925.01 | 0.821187 | 4.614417e-53 | 3.728106e-50 |
| MsG0380015466.01 | MsG0680030350.01 | 0.837655 | 4.573540e-57 | 5.981440e-54 |
| MsG0380015466.01 | MsG0680030882.01 | 0.819038 | 1.432278e-52 | 1.090095e-49 |
| MsG0380015466.01 | MsG0680031333.01 | -0.811886 | 5.593317e-51 | 3.503434e-48 |
| MsG0380015466.01 | MsG0680031628.01 | 0.840943 | 6.412772e-58 | 9.278305e-55 |
| MsG0380015466.01 | MsG0680031967.01 | 0.804321 | 2.284616e-49 | 1.174417e-46 |
| MsG0380015466.01 | MsG0680034230.01 | 0.809015 | 2.331806e-50 | 1.353642e-47 |
| MsG0380015466.01 | MsG0680035704.01 | 0.841100 | 5.832497e-58 | 8.479358e-55 |
| MsG0380015466.01 | MsG0680035765.01 | 0.810508 | 1.113131e-50 | 6.722236e-48 |
| MsG0380015466.01 | MsG0780036190.01 | 0.811674 | 6.221851e-51 | 3.875091e-48 |
| MsG0380015466.01 | MsG0780036486.01 | 0.807058 | 6.083408e-50 | 3.355040e-47 |
| MsG0380015466.01 | MsG0780036705.01 | 0.805497 | 1.297609e-49 | 6.875236e-47 |
| MsG0380015466.01 | MsG0780036964.01 | 0.840962 | 6.337742e-58 | 9.175314e-55 |
| MsG0380015466.01 | MsG0780036965.01 | 0.823530 | 1.318310e-53 | 1.138034e-50 |
| MsG0380015466.01 | MsG0780037093.01 | 0.818922 | 1.522108e-52 | 1.154810e-49 |
| MsG0380015466.01 | MsG0780038400.01 | 0.824953 | 6.103341e-54 | 5.487086e-51 |
| MsG0380015466.01 | MsG0780040057.01 | 0.812104 | 5.014056e-51 | 3.159378e-48 |
| MsG0380015466.01 | MsG0780040596.01 | 0.816441 | 5.521733e-52 | 3.912697e-49 |
| MsG0380015466.01 | MsG0780040858.01 | 0.818147 | 2.281219e-52 | 1.693884e-49 |
| MsG0380015466.01 | MsG0780041016.01 | 0.808192 | 3.494014e-50 | 1.985009e-47 |
| MsG0380015466.01 | MsG0780041137.01 | 0.839167 | 1.862658e-57 | 2.550825e-54 |
| MsG0380015466.01 | MsG0780041223.01 | 0.812862 | 3.423618e-51 | 2.201081e-48 |
| MsG0380015466.01 | MsG0780041402.01 | 0.810711 | 1.006190e-50 | 6.109718e-48 |
| MsG0380015466.01 | MsG0780041507.01 | 0.800290 | 1.544455e-48 | 7.164669e-46 |
| MsG0380015466.01 | MsG0780041692.01 | 0.818667 | 1.739287e-52 | 1.310122e-49 |
| MsG0380015466.01 | MsG0880042128.01 | 0.813736 | 2.200489e-51 | 1.448703e-48 |
| MsG0380015466.01 | MsG0880042129.01 | 0.839930 | 1.179898e-57 | 1.654436e-54 |
| MsG0380015466.01 | MsG0880043905.01 | 0.805531 | 1.276451e-49 | 6.769021e-47 |
| MsG0380015466.01 | MsG0880044394.01 | 0.811518 | 6.724644e-51 | 4.171589e-48 |
| MsG0380015466.01 | MsG0880044416.01 | 0.819697 | 1.013716e-52 | 7.857346e-50 |
| MsG0380015466.01 | MsG0880044728.01 | 0.808390 | 3.170964e-50 | 1.810856e-47 |
| MsG0380015466.01 | MsG0880045124.01 | 0.802516 | 5.406465e-49 | 2.653524e-46 |
| MsG0380015466.01 | MsG0880045362.01 | 0.802270 | 6.074403e-49 | 2.962893e-46 |
| MsG0380015466.01 | MsG0880045765.01 | 0.805786 | 1.128256e-49 | 6.022854e-47 |
| MsG0380015466.01 | MsG0880046126.01 | 0.838161 | 3.390105e-57 | 4.502010e-54 |
| MsG0380015466.01 | MsG0880046620.01 | 0.825424 | 4.723537e-54 | 4.303483e-51 |
| MsG0380015466.01 | MsG0880047427.01 | 0.827695 | 1.357107e-54 | 1.319919e-51 |
| MsG0380015466.01 | MsG0880047448.01 | 0.826589 | 2.496540e-54 | 2.351279e-51 |
| MsG0280006993.01 | MsG0380015466.01 | 0.826161 | 3.156775e-54 | 2.937312e-51 |
| MsG0280007164.01 | MsG0380015466.01 | 0.812398 | 4.326328e-51 | 2.747979e-48 |
| MsG0280007193.01 | MsG0380015466.01 | -0.808233 | 3.425755e-50 | 1.948243e-47 |
| MsG0280007222.01 | MsG0380015466.01 | 0.800467 | 1.421723e-48 | 6.624623e-46 |
| MsG0280007763.01 | MsG0380015466.01 | 0.801189 | 1.012427e-48 | 4.804776e-46 |
| MsG0280008182.01 | MsG0380015466.01 | 0.801081 | 1.065199e-48 | 5.041660e-46 |
| MsG0280008429.01 | MsG0380015466.01 | 0.822227 | 2.651511e-53 | 2.205988e-50 |
| MsG0280010013.01 | MsG0380015466.01 | 0.800527 | 1.382110e-48 | 6.449968e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380015466.01 | MsG0380018047.01 | PPI |
| MsG0780041153.01 | MsG0380015466.01 | PPI |
| MsG0380015466.01 | MsG0280006841.01 | PPI |
| MsG0380015466.01 | MsG0780041153.01 | PPI |
| MsG0280006841.01 | MsG0380015466.01 | PPI |
| MsG0480021461.01 | MsG0380015466.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015466.01.T01 | MTR_3g070500 | 93.750 | 160 | 6 | 1 | 7 | 166 | 78 | 233 | 2.62e-105 | 301 |
| MsG0380015466.01.T01 | MTR_3g463900 | 81.132 | 159 | 26 | 1 | 6 | 164 | 47 | 201 | 5.81e-93 | 268 |
| MsG0380015466.01.T01 | MTR_7g116340 | 66.871 | 163 | 48 | 2 | 4 | 165 | 15 | 172 | 4.23e-75 | 222 |
| MsG0380015466.01.T01 | MTR_3g070500 | 92.174 | 115 | 5 | 1 | 7 | 121 | 78 | 188 | 2.22e-72 | 216 |
| MsG0380015466.01.T01 | MTR_4g075290 | 63.750 | 160 | 54 | 1 | 6 | 165 | 17 | 172 | 1.11e-71 | 214 |
| MsG0380015466.01.T01 | MTR_3g117750 | 65.409 | 159 | 51 | 1 | 7 | 165 | 26 | 180 | 1.04e-70 | 212 |
| MsG0380015466.01.T01 | MTR_4g073650 | 59.748 | 159 | 59 | 2 | 7 | 164 | 60 | 214 | 2.64e-62 | 192 |
| MsG0380015466.01.T01 | MTR_1g085560 | 60.494 | 162 | 51 | 3 | 5 | 164 | 97 | 247 | 7.22e-62 | 191 |
| MsG0380015466.01.T01 | MTR_7g095750 | 60.870 | 161 | 58 | 2 | 8 | 167 | 22 | 178 | 4.57e-61 | 199 |
| MsG0380015466.01.T01 | MTR_7g110980 | 59.748 | 159 | 52 | 2 | 7 | 164 | 110 | 257 | 4.16e-60 | 187 |
| MsG0380015466.01.T01 | MTR_1g117010 | 59.119 | 159 | 53 | 3 | 7 | 164 | 94 | 241 | 6.57e-59 | 184 |
| MsG0380015466.01.T01 | MTR_1g117010 | 59.119 | 159 | 53 | 3 | 7 | 164 | 94 | 241 | 6.57e-59 | 184 |
| MsG0380015466.01.T01 | MTR_8g040180 | 54.601 | 163 | 66 | 4 | 4 | 164 | 29 | 185 | 2.02e-55 | 173 |
| MsG0380015466.01.T01 | MTR_8g079690 | 55.215 | 163 | 67 | 3 | 6 | 166 | 17 | 175 | 9.52e-54 | 174 |
| MsG0380015466.01.T01 | MTR_4g086760 | 55.000 | 160 | 68 | 2 | 6 | 164 | 17 | 173 | 2.95e-53 | 171 |
| MsG0380015466.01.T01 | MTR_4g086760 | 55.000 | 160 | 68 | 2 | 6 | 164 | 17 | 173 | 4.96e-53 | 171 |
| MsG0380015466.01.T01 | MTR_4g086760 | 55.000 | 160 | 68 | 2 | 6 | 164 | 17 | 173 | 6.55e-53 | 172 |
| MsG0380015466.01.T01 | MTR_3g070500 | 90.000 | 90 | 5 | 1 | 7 | 96 | 78 | 163 | 3.21e-52 | 164 |
| MsG0380015466.01.T01 | MTR_3g070500 | 89.888 | 89 | 5 | 1 | 7 | 95 | 78 | 162 | 1.05e-51 | 163 |
| MsG0380015466.01.T01 | MTR_1g011980 | 53.205 | 156 | 69 | 2 | 8 | 163 | 22 | 173 | 1.87e-41 | 147 |
| MsG0380015466.01.T01 | MTR_3g107660 | 51.266 | 158 | 70 | 2 | 8 | 163 | 25 | 177 | 3.18e-41 | 147 |
| MsG0380015466.01.T01 | MTR_2g085075 | 46.795 | 156 | 66 | 5 | 7 | 160 | 471 | 611 | 1.18e-34 | 127 |
| MsG0380015466.01.T01 | MTR_7g105220 | 43.871 | 155 | 70 | 4 | 7 | 159 | 19 | 158 | 1.73e-32 | 114 |
| MsG0380015466.01.T01 | MTR_8g036015 | 46.897 | 145 | 61 | 3 | 7 | 150 | 10 | 139 | 5.93e-32 | 112 |
| MsG0380015466.01.T01 | MTR_3g085705 | 52.427 | 103 | 44 | 3 | 50 | 152 | 27 | 124 | 5.95e-30 | 106 |
| MsG0380015466.01.T01 | MTR_5g015500 | 45.652 | 138 | 59 | 3 | 7 | 143 | 314 | 436 | 6.70e-27 | 105 |
| MsG0380015466.01.T01 | MTR_5g015500 | 45.652 | 138 | 59 | 3 | 7 | 143 | 354 | 476 | 9.44e-27 | 105 |
| MsG0380015466.01.T01 | MTR_2g023120 | 41.558 | 154 | 63 | 7 | 7 | 152 | 22 | 156 | 3.75e-21 | 89.7 |
| MsG0380015466.01.T01 | MTR_6g084140 | 36.420 | 162 | 78 | 7 | 7 | 158 | 27 | 173 | 9.03e-19 | 82.8 |
| MsG0380015466.01.T01 | MTR_6g084140 | 36.420 | 162 | 78 | 7 | 7 | 158 | 10 | 156 | 1.19e-18 | 82.4 |
| MsG0380015466.01.T01 | MTR_8g442420 | 35.802 | 162 | 79 | 7 | 7 | 158 | 10 | 156 | 2.06e-17 | 79.0 |
| MsG0380015466.01.T01 | MTR_2g461260 | 28.750 | 160 | 78 | 7 | 7 | 144 | 92 | 237 | 9.49e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015466.01.T01 | AT5G58710 | 79.375 | 160 | 29 | 1 | 5 | 164 | 47 | 202 | 2.32e-92 | 267 |
| MsG0380015466.01.T01 | AT2G29960 | 80.000 | 160 | 28 | 1 | 5 | 164 | 44 | 199 | 2.49e-91 | 265 |
| MsG0380015466.01.T01 | AT2G29960 | 80.000 | 160 | 28 | 1 | 5 | 164 | 44 | 199 | 2.49e-91 | 265 |
| MsG0380015466.01.T01 | AT3G55920 | 74.375 | 160 | 37 | 1 | 6 | 165 | 72 | 227 | 9.33e-85 | 249 |
| MsG0380015466.01.T01 | AT2G29960 | 75.000 | 160 | 26 | 2 | 5 | 164 | 44 | 189 | 6.62e-82 | 240 |
| MsG0380015466.01.T01 | AT2G21130 | 66.460 | 161 | 50 | 1 | 6 | 166 | 18 | 174 | 2.08e-75 | 223 |
| MsG0380015466.01.T01 | AT3G56070 | 66.258 | 163 | 51 | 1 | 4 | 166 | 15 | 173 | 2.95e-74 | 220 |
| MsG0380015466.01.T01 | AT3G56070 | 66.258 | 163 | 51 | 1 | 4 | 166 | 15 | 173 | 2.95e-74 | 220 |
| MsG0380015466.01.T01 | AT4G38740 | 65.000 | 160 | 52 | 1 | 6 | 165 | 17 | 172 | 1.49e-73 | 218 |
| MsG0380015466.01.T01 | AT2G16600 | 65.432 | 162 | 50 | 2 | 5 | 165 | 17 | 173 | 1.87e-73 | 218 |
| MsG0380015466.01.T01 | AT4G34870 | 64.780 | 159 | 52 | 1 | 7 | 165 | 18 | 172 | 6.71e-69 | 206 |
| MsG0380015466.01.T01 | AT4G34960 | 60.377 | 159 | 58 | 2 | 7 | 164 | 61 | 215 | 1.19e-64 | 197 |
| MsG0380015466.01.T01 | AT5G13120 | 59.375 | 160 | 53 | 3 | 6 | 164 | 102 | 250 | 1.51e-62 | 193 |
| MsG0380015466.01.T01 | AT5G13120 | 59.375 | 160 | 53 | 3 | 6 | 164 | 106 | 254 | 1.70e-62 | 193 |
| MsG0380015466.01.T01 | AT3G62030 | 60.625 | 160 | 51 | 2 | 6 | 164 | 107 | 255 | 2.44e-62 | 193 |
| MsG0380015466.01.T01 | AT3G62030 | 60.625 | 160 | 51 | 2 | 6 | 164 | 108 | 256 | 2.57e-62 | 193 |
| MsG0380015466.01.T01 | AT3G62030 | 60.625 | 160 | 51 | 2 | 6 | 164 | 161 | 309 | 1.09e-61 | 193 |
| MsG0380015466.01.T01 | AT3G63400 | 60.248 | 161 | 59 | 2 | 8 | 167 | 22 | 178 | 6.89e-60 | 191 |
| MsG0380015466.01.T01 | AT3G63400 | 60.248 | 161 | 59 | 2 | 8 | 167 | 22 | 178 | 3.42e-58 | 191 |
| MsG0380015466.01.T01 | AT3G63400 | 60.248 | 161 | 59 | 2 | 8 | 167 | 22 | 178 | 3.42e-58 | 191 |
| MsG0380015466.01.T01 | AT3G63400 | 60.248 | 161 | 59 | 2 | 8 | 167 | 22 | 178 | 3.42e-58 | 191 |
| MsG0380015466.01.T01 | AT2G15790 | 59.006 | 161 | 60 | 3 | 6 | 164 | 17 | 173 | 4.22e-56 | 180 |
| MsG0380015466.01.T01 | AT2G38730 | 55.828 | 163 | 64 | 3 | 4 | 164 | 43 | 199 | 2.77e-55 | 173 |
| MsG0380015466.01.T01 | AT2G16600 | 54.321 | 162 | 46 | 3 | 5 | 165 | 17 | 151 | 4.65e-52 | 163 |
| MsG0380015466.01.T01 | AT4G34960 | 62.609 | 115 | 39 | 1 | 7 | 121 | 61 | 171 | 1.42e-47 | 152 |
| MsG0380015466.01.T01 | AT4G32420 | 48.718 | 156 | 75 | 2 | 9 | 163 | 23 | 174 | 5.19e-38 | 138 |
| MsG0380015466.01.T01 | AT4G32420 | 48.718 | 156 | 75 | 2 | 9 | 163 | 23 | 174 | 5.19e-38 | 138 |
| MsG0380015466.01.T01 | AT4G32420 | 48.718 | 156 | 75 | 2 | 9 | 163 | 23 | 174 | 5.19e-38 | 138 |
| MsG0380015466.01.T01 | AT4G32420 | 48.718 | 156 | 75 | 2 | 9 | 163 | 23 | 174 | 5.19e-38 | 138 |
| MsG0380015466.01.T01 | AT3G22920 | 45.783 | 166 | 72 | 7 | 6 | 166 | 17 | 169 | 9.52e-36 | 124 |
| MsG0380015466.01.T01 | AT4G32420 | 49.645 | 141 | 66 | 2 | 9 | 148 | 23 | 159 | 9.47e-35 | 128 |
| MsG0380015466.01.T01 | AT3G44600 | 46.795 | 156 | 66 | 5 | 7 | 160 | 485 | 625 | 2.97e-34 | 127 |
| MsG0380015466.01.T01 | AT2G36130 | 46.853 | 143 | 59 | 4 | 19 | 159 | 31 | 158 | 1.84e-33 | 116 |
| MsG0380015466.01.T01 | AT1G01940 | 48.551 | 138 | 55 | 3 | 7 | 143 | 10 | 132 | 1.30e-32 | 114 |
| MsG0380015466.01.T01 | AT5G67530 | 41.401 | 157 | 75 | 4 | 7 | 161 | 353 | 494 | 6.10e-27 | 106 |
| MsG0380015466.01.T01 | AT4G33060 | 44.531 | 128 | 54 | 4 | 7 | 132 | 22 | 134 | 4.92e-25 | 100 |
| MsG0380015466.01.T01 | AT1G53720 | 35.185 | 162 | 80 | 7 | 7 | 158 | 10 | 156 | 2.00e-18 | 81.3 |
| MsG0380015466.01.T01 | AT1G53720 | 35.185 | 162 | 80 | 7 | 7 | 158 | 10 | 156 | 1.96e-17 | 79.0 |
Find 55 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACAAAATTTGCGGATTAC+AGG | 0.253431 | 3:-70578793 | MsG0380015466.01.T01:three_prime_UTR |
| TACTTATCAATGGCAAATTC+TGG | 0.262047 | 3:-70579354 | MsG0380015466.01.T01:CDS |
| ATTGAACAGAATCACATTTC+AGG | 0.278675 | 3:-70579680 | MsG0380015466.01.T01:intron |
| AATACCAAGCTTCATGGTTC+AGG | 0.307705 | 3:-70579595 | MsG0380015466.01.T01:CDS |
| AGAGGTGGAGAATCAATTTA+TGG | 0.308670 | 3:-70579546 | MsG0380015466.01.T01:CDS |
| AAAATGACGTTTCTTGCTTC+AGG | 0.313364 | 3:-70579937 | MsG0380015466.01.T01:CDS |
| GTATTCGGCAAGGTACTTTC+TGG | 0.319080 | 3:-70578962 | MsG0380015466.01.T01:CDS |
| GGGAAGCCTCTTCATTATAA+AGG | 0.323018 | 3:-70579636 | MsG0380015466.01.T01:CDS |
| TCTAAATTGGTCTTGCTAAA+GGG | 0.337350 | 3:-70578722 | MsG0380015466.01.T01:three_prime_UTR |
| TTCTAAATTGGTCTTGCTAA+AGG | 0.358280 | 3:-70578723 | MsG0380015466.01.T01:three_prime_UTR |
| TAATATGACAACCGTACGTT+TGG | 0.368386 | 3:+70578889 | None:intergenic |
| ACTATATTCTTGTAACCATT+AGG | 0.386796 | 3:+70578596 | None:intergenic |
| GATGGACGCCATGTTGTATT+CGG | 0.407292 | 3:-70578977 | MsG0380015466.01.T01:CDS |
| TAGGATAATACCAAGCTTCA+TGG | 0.419916 | 3:-70579601 | MsG0380015466.01.T01:CDS |
| AACTTCAAGCTGAAGCATAC+TGG | 0.421126 | 3:-70579504 | MsG0380015466.01.T01:CDS |
| TGCTTCAGGCCGCATAGTCA+TGG | 0.428023 | 3:-70579923 | MsG0380015466.01.T01:CDS |
| AATCACATTTCAGGAGAGAA+AGG | 0.447009 | 3:-70579671 | MsG0380015466.01.T01:CDS |
| GGAAGCCTCTTCATTATAAA+GGG | 0.457025 | 3:-70579635 | MsG0380015466.01.T01:CDS |
| AAGTAAATGAACAAAATTTG+CGG | 0.458182 | 3:-70578801 | MsG0380015466.01.T01:three_prime_UTR |
| CGGCAAGGTACTTTCTGGTA+TGG | 0.459775 | 3:-70578957 | MsG0380015466.01.T01:CDS |
| TCGGTACTGTGGTCCCAAAA+AGG | 0.462738 | 3:+70579899 | None:intergenic |
| CTAAATTGGTCTTGCTAAAG+GGG | 0.471631 | 3:-70578721 | MsG0380015466.01.T01:three_prime_UTR |
| AATATGACAACCGTACGTTT+GGG | 0.483233 | 3:+70578890 | None:intergenic |
| AACTTCCGTGCACTTTGTAC+AGG | 0.492063 | 3:-70579779 | MsG0380015466.01.T01:intron |
| ACTTATCAATGGCAAATTCT+GGG | 0.503353 | 3:-70579353 | MsG0380015466.01.T01:CDS |
| AAGCTGAAGCATACTGGTCC+AGG | 0.505316 | 3:-70579498 | MsG0380015466.01.T01:intron |
| TGAAGCTTGGTATTATCCTA+TGG | 0.510024 | 3:+70579604 | None:intergenic |
| ATCACATTTCAGGAGAGAAA+GGG | 0.524567 | 3:-70579670 | MsG0380015466.01.T01:CDS |
| GGTGATTTCACCAGTGGTGA+TGG | 0.524961 | 3:-70579570 | MsG0380015466.01.T01:CDS |
| ATTGTCAGGGTACTTATCAA+TGG | 0.528733 | 3:-70579364 | MsG0380015466.01.T01:intron |
| GCACTCCCTTTATAATGAAG+AGG | 0.531709 | 3:+70579630 | None:intergenic |
| ATACCAAGCTTCATGGTTCA+GGG | 0.533844 | 3:-70579594 | MsG0380015466.01.T01:CDS |
| GCTTCAGGCCGCATAGTCAT+GGG | 0.541140 | 3:-70579922 | MsG0380015466.01.T01:CDS |
| CAGGGTGGTGATTTCACCAG+TGG | 0.551230 | 3:-70579576 | MsG0380015466.01.T01:CDS |
| TCCACCTCTTCCATCACCAC+TGG | 0.551323 | 3:+70579560 | None:intergenic |
| TTGGTCTTGCTAAAGGGGAA+AGG | 0.552536 | 3:-70578716 | MsG0380015466.01.T01:three_prime_UTR |
| CGGTTGTCATATTAGACAGT+GGG | 0.555823 | 3:-70578880 | MsG0380015466.01.T01:CDS |
| CCACCCTGAACCATGAAGCT+TGG | 0.568403 | 3:+70579591 | None:intergenic |
| AAAATAGTCTTGAAATTCAG+AGG | 0.576402 | 3:+70578631 | None:intergenic |
| ACCAGTGGTGATGGAAGAGG+TGG | 0.583192 | 3:-70579561 | MsG0380015466.01.T01:CDS |
| GAAGCAGAAGGAAGTGAAAG+TGG | 0.583276 | 3:-70578917 | MsG0380015466.01.T01:CDS |
| ATAAAGGGAGTGCATTCCAT+AGG | 0.597730 | 3:-70579620 | MsG0380015466.01.T01:CDS |
| TTGTACAAGATTGAAGCAGA+AGG | 0.601264 | 3:-70578929 | MsG0380015466.01.T01:CDS |
| CATTTCAGGAGAGAAAGGGT+TGG | 0.604920 | 3:-70579666 | MsG0380015466.01.T01:CDS |
| AGCTACCTGTACAAAGTGCA+CGG | 0.605969 | 3:+70579774 | None:intergenic |
| AAGTGGCTCTCCCAAACGTA+CGG | 0.616615 | 3:-70578900 | MsG0380015466.01.T01:CDS |
| TTCACCAGTGGTGATGGAAG+AGG | 0.616816 | 3:-70579564 | MsG0380015466.01.T01:CDS |
| ACCACAGTACCGAAAACTGC+AGG | 0.618835 | 3:-70579889 | MsG0380015466.01.T01:intron |
| AATTCTGGGCAAGATACCAA+TGG | 0.655747 | 3:-70579339 | MsG0380015466.01.T01:CDS |
| ACGCCATGTTGTATTCGGCA+AGG | 0.658256 | 3:-70578972 | MsG0380015466.01.T01:CDS |
| ACGGTTGTCATATTAGACAG+TGG | 0.685203 | 3:-70578881 | MsG0380015466.01.T01:CDS |
| TTAATGGTAAAGTATACACA+TGG | 0.700938 | 3:+70578822 | None:intergenic |
| GTACCTTGCCGAATACAACA+TGG | 0.711169 | 3:+70578969 | None:intergenic |
| GGTTGTCATATTAGACAGTG+GGG | 0.725680 | 3:-70578879 | MsG0380015466.01.T01:CDS |
| CCAAGCTTCATGGTTCAGGG+TGG | 0.734538 | 3:-70579591 | MsG0380015466.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTATTTTCCTAA+TGG | - | Chr3:70579907-70579926 | MsG0380015466.01.T01:CDS | 10.0% |
| !! | CATTGTTTATAATATTTGAA+AGG | + | Chr3:70579348-70579367 | None:intergenic | 15.0% |
| !!! | AATTTTGTTCATTTACTTAA+TGG | + | Chr3:70579715-70579734 | None:intergenic | 15.0% |
| !!! | ATATTTATTTACACATGTTT+TGG | - | Chr3:70578667-70578686 | MsG0380015466.01.T01:three_prime_UTR | 15.0% |
| !! | AAGTAAATGAACAAAATTTG+CGG | - | Chr3:70579717-70579736 | MsG0380015466.01.T01:intron | 20.0% |
| !!! | AACATTATCTTGTTTATAGA+TGG | + | Chr3:70579092-70579111 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTCTTTTCTAAAT+TGG | - | Chr3:70579783-70579802 | MsG0380015466.01.T01:CDS | 20.0% |
| ! | ACTATATTCTTGTAACCATT+AGG | + | Chr3:70579925-70579944 | None:intergenic | 25.0% |
| ! | GATTGATCCTAAATTATAGT+TGG | + | Chr3:70578789-70578808 | None:intergenic | 25.0% |
| ! | TATATTCCATTGTTTACACA+TGG | - | Chr3:70579295-70579314 | MsG0380015466.01.T01:intron | 25.0% |
| ! | TTAATGGTAAAGTATACACA+TGG | + | Chr3:70579699-70579718 | None:intergenic | 25.0% |
| !! | AAAATAGTCTTGAAATTCAG+AGG | + | Chr3:70579890-70579909 | None:intergenic | 25.0% |
| AAAACATATGGATGCATGTT+AGG | + | Chr3:70579510-70579529 | None:intergenic | 30.0% | |
| ACTTATCAATGGCAAATTCT+GGG | - | Chr3:70579165-70579184 | MsG0380015466.01.T01:intron | 30.0% | |
| ATTGAACAGAATCACATTTC+AGG | - | Chr3:70578838-70578857 | MsG0380015466.01.T01:three_prime_UTR | 30.0% | |
| GGATCAATCTTGAAATTTCT+AGG | - | Chr3:70578800-70578819 | MsG0380015466.01.T01:three_prime_UTR | 30.0% | |
| TAACAACAGTAAAAACTAGC+TGG | - | Chr3:70579216-70579235 | MsG0380015466.01.T01:intron | 30.0% | |
| TACTTATCAATGGCAAATTC+TGG | - | Chr3:70579164-70579183 | MsG0380015466.01.T01:intron | 30.0% | |
| TAGGTTGTGAGATTAAAGAA+AGG | + | Chr3:70579491-70579510 | None:intergenic | 30.0% | |
| ! | TAAAGGGGAAAGGATTTTAA+GGG | - | Chr3:70579812-70579831 | MsG0380015466.01.T01:intron | 30.0% |
| ! | TTTGGTTTCATGTGAAAATC+TGG | - | Chr3:70578685-70578704 | MsG0380015466.01.T01:three_prime_UTR | 30.0% |
| !! | TCTAAATTGGTCTTGCTAAA+GGG | - | Chr3:70579796-70579815 | MsG0380015466.01.T01:intron | 30.0% |
| !! | TTCTAAATTGGTCTTGCTAA+AGG | - | Chr3:70579795-70579814 | MsG0380015466.01.T01:intron | 30.0% |
| AATATGACAACCGTACGTTT+GGG | + | Chr3:70579631-70579650 | None:intergenic | 35.0% | |
| AATCACATTTCAGGAGAGAA+AGG | - | Chr3:70578847-70578866 | MsG0380015466.01.T01:exon | 35.0% | |
| AGAGGTGGAGAATCAATTTA+TGG | - | Chr3:70578972-70578991 | MsG0380015466.01.T01:CDS | 35.0% | |
| ATCACATTTCAGGAGAGAAA+GGG | - | Chr3:70578848-70578867 | MsG0380015466.01.T01:exon | 35.0% | |
| ATGGTGAATCATAGTTGGAA+AGG | - | Chr3:70579314-70579333 | MsG0380015466.01.T01:CDS | 35.0% | |
| CTTTAAATGCAGATGAGTGA+AGG | - | Chr3:70579375-70579394 | MsG0380015466.01.T01:intron | 35.0% | |
| GACAATCATTCAAAGGTGAA+AGG | + | Chr3:70579140-70579159 | None:intergenic | 35.0% | |
| GATTCACCATGTGTAAACAA+TGG | + | Chr3:70579304-70579323 | None:intergenic | 35.0% | |
| GGAAGCCTCTTCATTATAAA+GGG | - | Chr3:70578883-70578902 | MsG0380015466.01.T01:CDS | 35.0% | |
| GGAGCAACCAACTATAATTT+AGG | - | Chr3:70578779-70578798 | MsG0380015466.01.T01:three_prime_UTR | 35.0% | |
| TAATATGACAACCGTACGTT+TGG | + | Chr3:70579632-70579651 | None:intergenic | 35.0% | |
| TACACATGGTGAATCATAGT+TGG | - | Chr3:70579309-70579328 | MsG0380015466.01.T01:CDS | 35.0% | |
| TAGGATAATACCAAGCTTCA+TGG | - | Chr3:70578917-70578936 | MsG0380015466.01.T01:CDS | 35.0% | |
| TATAGATGGATACACATGCA+TGG | + | Chr3:70579078-70579097 | None:intergenic | 35.0% | |
| TATGAAAAACTGTGAGCCAT+TGG | + | Chr3:70579198-70579217 | None:intergenic | 35.0% | |
| TCACCTTTGAATGATTGTCA+GGG | - | Chr3:70579141-70579160 | MsG0380015466.01.T01:intron | 35.0% | |
| TGAAGCTTGGTATTATCCTA+TGG | + | Chr3:70578917-70578936 | None:intergenic | 35.0% | |
| TTCACCTTTGAATGATTGTC+AGG | - | Chr3:70579140-70579159 | MsG0380015466.01.T01:intron | 35.0% | |
| TTGTACAAGATTGAAGCAGA+AGG | - | Chr3:70579589-70579608 | MsG0380015466.01.T01:CDS | 35.0% | |
| ! | ACATGCATCCATATGTTTTC+TGG | - | Chr3:70579511-70579530 | MsG0380015466.01.T01:CDS | 35.0% |
| ! | ATTGTCAGGGTACTTATCAA+TGG | - | Chr3:70579154-70579173 | MsG0380015466.01.T01:intron | 35.0% |
| ! | CTAAAGGGGAAAGGATTTTA+AGG | - | Chr3:70579811-70579830 | MsG0380015466.01.T01:intron | 35.0% |
| ! | GAACAAAATTTGCGGATTAC+AGG | - | Chr3:70579725-70579744 | MsG0380015466.01.T01:intron | 35.0% |
| !! | CTAAATTGGTCTTGCTAAAG+GGG | - | Chr3:70579797-70579816 | MsG0380015466.01.T01:intron | 35.0% |
| AACTTCAAGCTGAAGCATAC+TGG | - | Chr3:70579014-70579033 | MsG0380015466.01.T01:intron | 40.0% | |
| AATACCAAGCTTCATGGTTC+AGG | - | Chr3:70578923-70578942 | MsG0380015466.01.T01:CDS | 40.0% | |
| AATTCTGGGCAAGATACCAA+TGG | - | Chr3:70579179-70579198 | MsG0380015466.01.T01:intron | 40.0% | |
| ACGGTTGTCATATTAGACAG+TGG | - | Chr3:70579637-70579656 | MsG0380015466.01.T01:CDS | 40.0% | |
| AGAGAAAGGGTTGGAAAAAG+TGG | - | Chr3:70578861-70578880 | MsG0380015466.01.T01:exon | 40.0% | |
| ATACCAAGCTTCATGGTTCA+GGG | - | Chr3:70578924-70578943 | MsG0380015466.01.T01:CDS | 40.0% | |
| CAATAGCACATAATCTCACC+TGG | + | Chr3:70579041-70579060 | None:intergenic | 40.0% | |
| CGGTTGTCATATTAGACAGT+GGG | - | Chr3:70579638-70579657 | MsG0380015466.01.T01:CDS | 40.0% | |
| GAGAAAGGGTTGGAAAAAGT+GGG | - | Chr3:70578862-70578881 | MsG0380015466.01.T01:CDS | 40.0% | |
| GCACTCCCTTTATAATGAAG+AGG | + | Chr3:70578891-70578910 | None:intergenic | 40.0% | |
| GGGAAGCCTCTTCATTATAA+AGG | - | Chr3:70578882-70578901 | MsG0380015466.01.T01:CDS | 40.0% | |
| GGTTGTCATATTAGACAGTG+GGG | - | Chr3:70579639-70579658 | MsG0380015466.01.T01:CDS | 40.0% | |
| GTACCCTGACAATCATTCAA+AGG | + | Chr3:70579147-70579166 | None:intergenic | 40.0% | |
| ! | ACGGAAGTTTTCTGCACAAA+AGG | + | Chr3:70578728-70578747 | None:intergenic | 40.0% |
| ! | ATAAAGGGAGTGCATTCCAT+AGG | - | Chr3:70578898-70578917 | MsG0380015466.01.T01:CDS | 40.0% |
| ! | CAGGTAGCTTTGCTTTGAAT+TGG | - | Chr3:70578758-70578777 | MsG0380015466.01.T01:three_prime_UTR | 40.0% |
| ! | CATAGCATACCTGCAGTTTT+CGG | + | Chr3:70578641-70578660 | None:intergenic | 40.0% |
| ! | CGGAAGTTTTCTGCACAAAA+GGG | + | Chr3:70578727-70578746 | None:intergenic | 40.0% |
| ! | GCATCCATATGTTTTCTGGA+AGG | - | Chr3:70579515-70579534 | MsG0380015466.01.T01:CDS | 40.0% |
| AACTTCCGTGCACTTTGTAC+AGG | - | Chr3:70578739-70578758 | MsG0380015466.01.T01:three_prime_UTR | 45.0% | |
| AGCTACCTGTACAAAGTGCA+CGG | + | Chr3:70578747-70578766 | None:intergenic | 45.0% | |
| CAAAAAGGCCCATGACTATG+CGG | + | Chr3:70578607-70578626 | None:intergenic | 45.0% | |
| CATTTCAGGAGAGAAAGGGT+TGG | - | Chr3:70578852-70578871 | MsG0380015466.01.T01:exon | 45.0% | |
| CCAGCCTTCCAGAAAACATA+TGG | + | Chr3:70579522-70579541 | None:intergenic | 45.0% | |
| GAAGCAGAAGGAAGTGAAAG+TGG | - | Chr3:70579601-70579620 | MsG0380015466.01.T01:CDS | 45.0% | |
| GATGGACGCCATGTTGTATT+CGG | - | Chr3:70579541-70579560 | MsG0380015466.01.T01:CDS | 45.0% | |
| GTACCTTGCCGAATACAACA+TGG | + | Chr3:70579552-70579571 | None:intergenic | 45.0% | |
| ! | GCATAGTCATGGGCCTTTTT+GGG | - | Chr3:70578606-70578625 | MsG0380015466.01.T01:three_prime_UTR | 45.0% |
| ! | GTATTCGGCAAGGTACTTTC+TGG | - | Chr3:70579556-70579575 | MsG0380015466.01.T01:CDS | 45.0% |
| !! | ATGTTTTCTGGAAGGCTGGA+TGG | - | Chr3:70579523-70579542 | MsG0380015466.01.T01:CDS | 45.0% |
| !! | CCATATGTTTTCTGGAAGGC+TGG | - | Chr3:70579519-70579538 | MsG0380015466.01.T01:CDS | 45.0% |
| !! | TTGGTCTTGCTAAAGGGGAA+AGG | - | Chr3:70579802-70579821 | MsG0380015466.01.T01:intron | 45.0% |
| AAGCTGAAGCATACTGGTCC+AGG | - | Chr3:70579020-70579039 | MsG0380015466.01.T01:intron | 50.0% | |
| AAGTGGCTCTCCCAAACGTA+CGG | - | Chr3:70579618-70579637 | MsG0380015466.01.T01:CDS | 50.0% | |
| ACGCCATGTTGTATTCGGCA+AGG | - | Chr3:70579546-70579565 | MsG0380015466.01.T01:CDS | 50.0% | |
| GGTGATTTCACCAGTGGTGA+TGG | - | Chr3:70578948-70578967 | MsG0380015466.01.T01:CDS | 50.0% | |
| TCGGTACTGTGGTCCCAAAA+AGG | + | Chr3:70578622-70578641 | None:intergenic | 50.0% | |
| ! | ACCACAGTACCGAAAACTGC+AGG | - | Chr3:70578629-70578648 | MsG0380015466.01.T01:three_prime_UTR | 50.0% |
| ! | ACCTGCAGTTTTCGGTACTG+TGG | + | Chr3:70578633-70578652 | None:intergenic | 50.0% |
| ! | CGCATAGTCATGGGCCTTTT+TGG | - | Chr3:70578605-70578624 | MsG0380015466.01.T01:three_prime_UTR | 50.0% |
| ! | CGGCAAGGTACTTTCTGGTA+TGG | - | Chr3:70579561-70579580 | MsG0380015466.01.T01:CDS | 50.0% |
| !! | TTCACCAGTGGTGATGGAAG+AGG | - | Chr3:70578954-70578973 | MsG0380015466.01.T01:CDS | 50.0% |
| CAGGGTGGTGATTTCACCAG+TGG | - | Chr3:70578942-70578961 | MsG0380015466.01.T01:CDS | 55.0% | |
| CCAAGCTTCATGGTTCAGGG+TGG | - | Chr3:70578927-70578946 | MsG0380015466.01.T01:CDS | 55.0% | |
| CCACCCTGAACCATGAAGCT+TGG | + | Chr3:70578930-70578949 | None:intergenic | 55.0% | |
| GCTTCAGGCCGCATAGTCAT+GGG | - | Chr3:70578596-70578615 | MsG0380015466.01.T01:three_prime_UTR | 55.0% | |
| TCCACCTCTTCCATCACCAC+TGG | + | Chr3:70578961-70578980 | None:intergenic | 55.0% | |
| TGCTTCAGGCCGCATAGTCA+TGG | - | Chr3:70578595-70578614 | MsG0380015466.01.T01:three_prime_UTR | 55.0% | |
| !! | ACCAGTGGTGATGGAAGAGG+TGG | - | Chr3:70578957-70578976 | MsG0380015466.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 70578584 | 70579956 | 70578584 | ID=MsG0380015466.01;Name=MsG0380015466.01 |
| Chr3 | mRNA | 70578584 | 70579956 | 70578584 | ID=MsG0380015466.01.T01;Parent=MsG0380015466.01;Name=MsG0380015466.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.75|0.6|1|0.75|0.8|5|278|167 |
| Chr3 | exon | 70578584 | 70579003 | 70578584 | ID=MsG0380015466.01.T01:exon:462;Parent=MsG0380015466.01.T01 |
| Chr3 | exon | 70579303 | 70579378 | 70579303 | ID=MsG0380015466.01.T01:exon:461;Parent=MsG0380015466.01.T01 |
| Chr3 | exon | 70579499 | 70579693 | 70579499 | ID=MsG0380015466.01.T01:exon:460;Parent=MsG0380015466.01.T01 |
| Chr3 | exon | 70579780 | 70579803 | 70579780 | ID=MsG0380015466.01.T01:exon:459;Parent=MsG0380015466.01.T01 |
| Chr3 | exon | 70579890 | 70579956 | 70579890 | ID=MsG0380015466.01.T01:exon:458;Parent=MsG0380015466.01.T01 |
| Chr3 | CDS | 70579890 | 70579956 | 70579890 | ID=MsG0380015466.01.T01:cds;Parent=MsG0380015466.01.T01 |
| Chr3 | CDS | 70579780 | 70579803 | 70579780 | ID=MsG0380015466.01.T01:cds;Parent=MsG0380015466.01.T01 |
| Chr3 | CDS | 70579499 | 70579693 | 70579499 | ID=MsG0380015466.01.T01:cds;Parent=MsG0380015466.01.T01 |
| Chr3 | CDS | 70579303 | 70579378 | 70579303 | ID=MsG0380015466.01.T01:cds;Parent=MsG0380015466.01.T01 |
| Chr3 | CDS | 70578862 | 70579003 | 70578862 | ID=MsG0380015466.01.T01:cds;Parent=MsG0380015466.01.T01 |
| Chr3 | three_prime_UTR | 70578584 | 70578861 | 70578584 | ID=MsG0380015466.01.T01:three_prime_utr;Parent=MsG0380015466.01.T01 |
| Gene Sequence |
| Protein sequence |
