Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022673.01.T01 | XP_013457204.1 | 97.872 | 376 | 6 | 1 | 1 | 374 | 51 | 426 | 0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022673.01.T01 | Q8IXS8 | 31.613 | 155 | 97 | 3 | 62 | 207 | 54 | 208 | 5.18E-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022673.01.T01 | A0A072UZE2 | 97.872 | 376 | 6 | 1 | 1 | 374 | 51 | 426 | 0.0 | 742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480022673.01 | MsG0880044523.01 | -0.828706 | 7.743650e-55 | 7.756973e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022673.01.T01 | MTR_4g094262 | 97.872 | 376 | 6 | 1 | 1 | 374 | 51 | 426 | 0.0 | 742 |
| MsG0480022673.01.T01 | MTR_3g465420 | 41.642 | 341 | 158 | 9 | 7 | 340 | 22 | 328 | 1.56e-73 | 233 |
| MsG0480022673.01.T01 | MTR_5g087660 | 41.108 | 343 | 159 | 9 | 7 | 340 | 22 | 330 | 2.15e-72 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022673.01.T01 | AT5G64090 | 61.558 | 398 | 127 | 8 | 1 | 374 | 53 | 448 | 5.33e-152 | 436 |
| MsG0480022673.01.T01 | AT5G21050 | 43.642 | 346 | 140 | 9 | 6 | 340 | 30 | 331 | 7.49e-75 | 236 |
Find 152 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTACATTGAGAATTCT+AGG | 0.209235 | 4:-75370944 | MsG0480022673.01.T01:CDS |
| TGCAGAAAACATGAGGAATT+TGG | 0.239197 | 4:-75371050 | MsG0480022673.01.T01:CDS |
| TTTGAAACGAGAAGTATTTC+AGG | 0.258251 | 4:+75370707 | None:intergenic |
| TTTGGAGATTCTTCACATTC+AGG | 0.260578 | 4:+75371013 | None:intergenic |
| GAGAAGTATTTCAGGTTTCT+TGG | 0.269172 | 4:+75370715 | None:intergenic |
| TTGAGGAGAGGGAGTGGATT+CGG | 0.282220 | 4:+75371767 | None:intergenic |
| GTGGATTCGGGAACGGGCTT+TGG | 0.286133 | 4:+75371780 | None:intergenic |
| GACGATGGAGGCACGTTTAG+TGG | 0.324049 | 4:+75371288 | None:intergenic |
| TGAGGAGAGGGAGTGGATTC+GGG | 0.342941 | 4:+75371768 | None:intergenic |
| TGCAGCCGGCTGGGCCGGTC+AGG | 0.345212 | 4:-75371191 | MsG0480022673.01.T01:CDS |
| TTTGCAGATTTGCAGCCGGC+TGG | 0.356315 | 4:-75371201 | MsG0480022673.01.T01:CDS |
| GAGGGCGGAGTAAGCGGTGG+GGG | 0.358355 | 4:+75371672 | None:intergenic |
| GGAGGATTGAGGAGAGGGAG+TGG | 0.358687 | 4:+75371761 | None:intergenic |
| AACCGGAGAGGGAGGAGGAG+AGG | 0.364067 | 4:+75371653 | None:intergenic |
| TCCCCTTTCGCAATTCCCTT+TGG | 0.370606 | 4:+75370995 | None:intergenic |
| AGATCTCACATATGCCTTCC+TGG | 0.371028 | 4:-75371237 | MsG0480022673.01.T01:CDS |
| TATTTCAGGTTTCTTGGCCT+TGG | 0.374176 | 4:+75370721 | None:intergenic |
| GAGTGAGAGAGCAGGGCGTT+CGG | 0.375623 | 4:+75371702 | None:intergenic |
| GGAGAGGGCGGAGTAAGCGG+TGG | 0.376095 | 4:+75371669 | None:intergenic |
| CCAACAGAGGGGTTAGGGTT+TGG | 0.381151 | 4:+75371352 | None:intergenic |
| AGAGAGTGGAGGTGTGGGTA+GGG | 0.383138 | 4:+75371740 | None:intergenic |
| GAGGGAGTGGATTCGGGAAC+GGG | 0.383285 | 4:+75371774 | None:intergenic |
| TGCAAGAGCTTCTCATGATT+TGG | 0.393275 | 4:-75370849 | MsG0480022673.01.T01:CDS |
| ACCAGCACGCGATTTAGTTT+CGG | 0.393843 | 4:+75371450 | None:intergenic |
| AGGGGAGAGAGTGGAGGTGT+GGG | 0.396681 | 4:+75371735 | None:intergenic |
| GGAGGAGAGGGCGGAGTAAG+CGG | 0.397490 | 4:+75371666 | None:intergenic |
| GAGGGGATCGGAGTGGGAAC+CGG | 0.401873 | 4:+75371636 | None:intergenic |
| GTCTCATTCAGCTTGATAAC+AGG | 0.402026 | 4:-75370799 | MsG0480022673.01.T01:CDS |
| ATTACACCAACAGAGGGGTT+AGG | 0.407751 | 4:+75371346 | None:intergenic |
| GTGGGAACCGGAGAGGGAGG+AGG | 0.408689 | 4:+75371648 | None:intergenic |
| GAGGAGAGGAGTGAGAGAGC+AGG | 0.409039 | 4:+75371694 | None:intergenic |
| AGATTTGCAGCCGGCTGGGC+CGG | 0.409835 | 4:-75371196 | MsG0480022673.01.T01:CDS |
| GAAGTATTTCCCAAGGTAAA+GGG | 0.414455 | 4:+75370966 | None:intergenic |
| GGTAGGGAGGATTGAGGAGA+GGG | 0.420269 | 4:+75371756 | None:intergenic |
| ACCGGAGAGGGAGGAGGAGA+GGG | 0.423300 | 4:+75371654 | None:intergenic |
| ATTTAGTTTCGGCGGCGTAA+AGG | 0.427602 | 4:+75371461 | None:intergenic |
| GAGGGGAGAGAGTGGAGGTG+TGG | 0.428254 | 4:+75371734 | None:intergenic |
| ACTCCGATCCCCTCTGTCAC+TGG | 0.434403 | 4:-75371627 | MsG0480022673.01.T01:CDS |
| TCGGGAACGGGCTTTGGAAA+CGG | 0.439079 | 4:+75371786 | None:intergenic |
| AATTCTAGGACATTGTTTGA+TGG | 0.439678 | 4:-75370930 | MsG0480022673.01.T01:CDS |
| GAGAGAGTGGAGGTGTGGGT+AGG | 0.444891 | 4:+75371739 | None:intergenic |
| TTGCAGATTTGCAGCCGGCT+GGG | 0.445225 | 4:-75371200 | MsG0480022673.01.T01:CDS |
| GAGTGGAGGTGTGGGTAGGG+AGG | 0.451414 | 4:+75371743 | None:intergenic |
| TGAAGTATTTCCCAAGGTAA+AGG | 0.455787 | 4:+75370965 | None:intergenic |
| TTTAGTTTCGGCGGCGTAAA+GGG | 0.457960 | 4:+75371462 | None:intergenic |
| GCCCTCTCCTCCTCCCTCTC+CGG | 0.459105 | 4:-75371655 | MsG0480022673.01.T01:CDS |
| GGAGAAGAAGATTTACGAAT+GGG | 0.459787 | 4:+75371373 | None:intergenic |
| TCCTTCATCCCTCTTCTCTC+CGG | 0.459889 | 4:-75371553 | MsG0480022673.01.T01:CDS |
| TTACACCAACAGAGGGGTTA+GGG | 0.464256 | 4:+75371347 | None:intergenic |
| ACCGGAGAGAAGAGGGATGA+AGG | 0.465779 | 4:+75371552 | None:intergenic |
| TTGATCAAATTCTCTCCGGC+AGG | 0.467060 | 4:+75371162 | None:intergenic |
| ATTGACGGAATTGATAGATC+AGG | 0.468516 | 4:+75371406 | None:intergenic |
| ACAATCCTGACCGGCCCAGC+CGG | 0.471222 | 4:+75371186 | None:intergenic |
| TTCACCTCTTGAGATATCAA+TGG | 0.474080 | 4:+75370905 | None:intergenic |
| TCCGATCCACCTTCCCTCGC+CGG | 0.477603 | 4:-75371505 | MsG0480022673.01.T01:CDS |
| AGAGGGAGTGGATTCGGGAA+CGG | 0.478767 | 4:+75371773 | None:intergenic |
| TGAGAGTGAGGTTGAGATTG+AGG | 0.481399 | 4:-75371077 | MsG0480022673.01.T01:CDS |
| GATCGGAGTGGGAACCGGAG+AGG | 0.482566 | 4:+75371641 | None:intergenic |
| CGGAGGAATGGACACGGGAG+AGG | 0.483161 | 4:+75371524 | None:intergenic |
| AGAGGGCGGAGTAAGCGGTG+GGG | 0.484212 | 4:+75371671 | None:intergenic |
| ATTCTAGGACATTGTTTGAT+GGG | 0.484548 | 4:-75370929 | MsG0480022673.01.T01:CDS |
| GTCGGCGAGAGGGGAGAGAG+TGG | 0.488770 | 4:+75371726 | None:intergenic |
| CGATTTGATCAAATTCTCTC+CGG | 0.491376 | 4:+75371158 | None:intergenic |
| GGATAGAATCCCTTTACCTT+GGG | 0.497138 | 4:-75370975 | MsG0480022673.01.T01:CDS |
| AGGAGAGGAGTGAGAGAGCA+GGG | 0.498639 | 4:+75371695 | None:intergenic |
| AAGATTTACGAATGGGTGAA+TGG | 0.502673 | 4:+75371380 | None:intergenic |
| GGGATAGAATCCCTTTACCT+TGG | 0.502774 | 4:-75370976 | MsG0480022673.01.T01:CDS |
| GCCGGCGAGGGAAGGTGGAT+CGG | 0.505555 | 4:+75371504 | None:intergenic |
| GCAAAATTCAAGCTTGGACC+AGG | 0.507797 | 4:+75371219 | None:intergenic |
| CTCCAAAGGGAATTGCGAAA+GGG | 0.507816 | 4:-75370997 | MsG0480022673.01.T01:CDS |
| TCAGGTTTCTTGGCCTTGGT+AGG | 0.509592 | 4:+75370725 | None:intergenic |
| GGGAAGGTGGATCGGAGGAA+TGG | 0.509820 | 4:+75371512 | None:intergenic |
| ATCGGAGTGGGAACCGGAGA+GGG | 0.511741 | 4:+75371642 | None:intergenic |
| GGAGAGGGAGGAGGAGAGGG+CGG | 0.517636 | 4:+75371657 | None:intergenic |
| CCAACGATCCAATGCACTCA+TGG | 0.517639 | 4:-75371816 | None:intergenic |
| CTCAAGCAATACTTGCTACA+AGG | 0.522209 | 4:-75370823 | MsG0480022673.01.T01:CDS |
| TCGAAGCCGGCGAGGGAAGG+TGG | 0.523135 | 4:+75371499 | None:intergenic |
| TTCAGCTTGATAACAGGACT+AGG | 0.524873 | 4:-75370793 | MsG0480022673.01.T01:CDS |
| GGTAGAGACCGGAGAGAAGA+GGG | 0.525777 | 4:+75371545 | None:intergenic |
| GGCGTTCGGAGTCGGCGAGA+GGG | 0.530745 | 4:+75371716 | None:intergenic |
| TAAGAGAACAGCTTCGAAGC+CGG | 0.535159 | 4:+75371486 | None:intergenic |
| GCGTTCGGAGTCGGCGAGAG+GGG | 0.539053 | 4:+75371717 | None:intergenic |
| AACAGCTTCGAAGCCGGCGA+GGG | 0.539539 | 4:+75371492 | None:intergenic |
| TGGAGAAGAAGATTTACGAA+TGG | 0.541250 | 4:+75371372 | None:intergenic |
| CTAGCTCTAAGTAATGGTAA+TGG | 0.541350 | 4:-75371118 | MsG0480022673.01.T01:CDS |
| ATGGGTGAATGGTAAATTGA+CGG | 0.542629 | 4:+75371391 | None:intergenic |
| TGTCCTAGAATTCTCAATGT+AGG | 0.546909 | 4:+75370941 | None:intergenic |
| GCCGAAACTAAATCGCGTGC+TGG | 0.554243 | 4:-75371451 | MsG0480022673.01.T01:CDS |
| AAATCTGCAAAATTCAAGCT+TGG | 0.555086 | 4:+75371213 | None:intergenic |
| GATTCCCACCATGAGTGCAT+TGG | 0.556918 | 4:+75371808 | None:intergenic |
| CCGGTCAGGATTGTCCCTGC+CGG | 0.558544 | 4:-75371177 | MsG0480022673.01.T01:CDS |
| GAGAGCAGGGCGTTCGGAGT+CGG | 0.561359 | 4:+75371708 | None:intergenic |
| GAGAGGGCGGAGTAAGCGGT+GGG | 0.563795 | 4:+75371670 | None:intergenic |
| ACAGCAAGGTGAGGTTCAAG+AGG | 0.564282 | 4:+75371316 | None:intergenic |
| GGGCGTTCGGAGTCGGCGAG+AGG | 0.565682 | 4:+75371715 | None:intergenic |
| ATCGTAAAGCCAGTGACAGA+GGG | 0.566114 | 4:+75371618 | None:intergenic |
| GTGACAGAGGGGATCGGAGT+GGG | 0.567025 | 4:+75371630 | None:intergenic |
| GGAGGTGAGGATCGGAGGAG+AGG | 0.569307 | 4:+75371590 | None:intergenic |
| GCTTCGAAGCCGGCGAGGGA+AGG | 0.569888 | 4:+75371496 | None:intergenic |
| AATGGTAATGGTAATAGCAA+TGG | 0.576027 | 4:-75371106 | MsG0480022673.01.T01:CDS |
| GGAGTGGGAACCGGAGAGGG+AGG | 0.576514 | 4:+75371645 | None:intergenic |
| CCAAACCCTAACCCCTCTGT+TGG | 0.577505 | 4:-75371352 | MsG0480022673.01.T01:CDS |
| AACGAGACGGAGGTGAGGAT+CGG | 0.577923 | 4:+75371582 | None:intergenic |
| TCTCCAAAGGGAATTGCGAA+AGG | 0.578727 | 4:-75370998 | MsG0480022673.01.T01:CDS |
| AATACTCTAGCTCTAAGTAA+TGG | 0.582264 | 4:-75371124 | MsG0480022673.01.T01:CDS |
| GACACGGGAGAGGTAGAGAC+CGG | 0.583950 | 4:+75371534 | None:intergenic |
| GTGGATCGGAGGAATGGACA+CGG | 0.585026 | 4:+75371518 | None:intergenic |
| GAATGTGAAGAATCTCCAAA+GGG | 0.585737 | 4:-75371010 | MsG0480022673.01.T01:CDS |
| AAGCCAGTGACAGAGGGGAT+CGG | 0.586908 | 4:+75371624 | None:intergenic |
| GGCGAGAGGGGAGAGAGTGG+AGG | 0.586934 | 4:+75371729 | None:intergenic |
| AGGTAGAGACCGGAGAGAAG+AGG | 0.587874 | 4:+75371544 | None:intergenic |
| GAGACGGAGGTGAGGATCGG+AGG | 0.588928 | 4:+75371585 | None:intergenic |
| AGAGAAGAGGGATGAAGGAG+AGG | 0.590308 | 4:+75371557 | None:intergenic |
| TTAGAGCTAGAGTATTGTTG+AGG | 0.595108 | 4:+75371131 | None:intergenic |
| GGCGAGGGAAGGTGGATCGG+AGG | 0.595709 | 4:+75371507 | None:intergenic |
| TTGACGGAATTGATAGATCA+GGG | 0.596835 | 4:+75371407 | None:intergenic |
| TCCAAAGGGAATTGCGAAAG+GGG | 0.598466 | 4:-75370996 | MsG0480022673.01.T01:CDS |
| GGGTAGGGAGGATTGAGGAG+AGG | 0.599122 | 4:+75371755 | None:intergenic |
| TCAGGGATAGTAACAAGAAG+AGG | 0.600520 | 4:+75371424 | None:intergenic |
| TGAATGTGAAGAATCTCCAA+AGG | 0.603961 | 4:-75371011 | MsG0480022673.01.T01:CDS |
| CGATCCAATGCACTCATGGT+GGG | 0.607575 | 4:-75371812 | None:intergenic |
| GGTGTGGGTAGGGAGGATTG+AGG | 0.612037 | 4:+75371750 | None:intergenic |
| GTAGGTTGAAGTATTTCCCA+AGG | 0.612616 | 4:+75370959 | None:intergenic |
| TGATCAAATTCTCTCCGGCA+GGG | 0.613280 | 4:+75371163 | None:intergenic |
| ACGATCCAATGCACTCATGG+TGG | 0.613584 | 4:-75371813 | None:intergenic |
| TCAGCTTGATAACAGGACTA+GGG | 0.615276 | 4:-75370792 | MsG0480022673.01.T01:CDS |
| CCGGCAGGGACAATCCTGAC+CGG | 0.615983 | 4:+75371177 | None:intergenic |
| CAATGGTGATGGTGAGAGTG+AGG | 0.619509 | 4:-75371089 | MsG0480022673.01.T01:CDS |
| AATTCAAGCTTGGACCAGGA+AGG | 0.619875 | 4:+75371223 | None:intergenic |
| ACTAAACGTGCCTCCATCGT+CGG | 0.619926 | 4:-75371286 | MsG0480022673.01.T01:CDS |
| GCAAGGTGAGGTTCAAGAGG+AGG | 0.620856 | 4:+75371319 | None:intergenic |
| TGGATCGGAGGAATGGACAC+GGG | 0.622587 | 4:+75371519 | None:intergenic |
| AGGAAGTTGCAGAAAACATG+AGG | 0.628039 | 4:-75371057 | MsG0480022673.01.T01:CDS |
| GAACAGCTTCGAAGCCGGCG+AGG | 0.633358 | 4:+75371491 | None:intergenic |
| GGGTCCATTGATATCTCAAG+AGG | 0.633836 | 4:-75370909 | MsG0480022673.01.T01:CDS |
| AGGACAACGAGACGGAGGTG+AGG | 0.633838 | 4:+75371577 | None:intergenic |
| AAATGTCAACACACCTACCA+AGG | 0.636053 | 4:-75370738 | MsG0480022673.01.T01:CDS |
| TATCGTAAAGCCAGTGACAG+AGG | 0.636361 | 4:+75371617 | None:intergenic |
| TGAAGGAGAGGACAACGAGA+CGG | 0.637200 | 4:+75371569 | None:intergenic |
| AGCACGCGATTTAGTTTCGG+CGG | 0.638043 | 4:+75371453 | None:intergenic |
| AAGAGCAACACCGACGATGG+AGG | 0.638909 | 4:+75371276 | None:intergenic |
| ATGAAGAGCAACACCGACGA+TGG | 0.640506 | 4:+75371273 | None:intergenic |
| GTGGATTTAACAGCAAGGTG+AGG | 0.642292 | 4:+75371307 | None:intergenic |
| AATGGTAATAGCAATGGTGA+TGG | 0.661917 | 4:-75371100 | MsG0480022673.01.T01:CDS |
| GGTGAAATTACACCAACAGA+GGG | 0.665624 | 4:+75371340 | None:intergenic |
| AGGTGAAATTACACCAACAG+AGG | 0.674395 | 4:+75371339 | None:intergenic |
| GTTTAGTGGATTTAACAGCA+AGG | 0.679823 | 4:+75371302 | None:intergenic |
| AGTGACAGAGGGGATCGGAG+TGG | 0.681146 | 4:+75371629 | None:intergenic |
| AGGAGAGGACAACGAGACGG+AGG | 0.707772 | 4:+75371572 | None:intergenic |
| TCGTAAAGCCAGTGACAGAG+GGG | 0.717842 | 4:+75371619 | None:intergenic |
| CTTGTAGCAAGTATTGCTTG+AGG | 0.724073 | 4:+75370824 | None:intergenic |
| GTGAAATTACACCAACAGAG+GGG | 0.754147 | 4:+75371341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATCTGCAAAATTCAAGCT+TGG | + | Chr4:75371298-75371317 | None:intergenic | 30.0% | |
| !! | AATACTCTAGCTCTAAGTAA+TGG | - | Chr4:75371384-75371403 | MsG0480022673.01.T01:CDS | 30.0% |
| !! | AATGGTAATGGTAATAGCAA+TGG | - | Chr4:75371402-75371421 | MsG0480022673.01.T01:CDS | 30.0% |
| !! | AATTCTAGGACATTGTTTGA+TGG | - | Chr4:75371578-75371597 | MsG0480022673.01.T01:CDS | 30.0% |
| !! | ATTCTAGGACATTGTTTGAT+GGG | - | Chr4:75371579-75371598 | MsG0480022673.01.T01:CDS | 30.0% |
| !! | TTTGAAACGAGAAGTATTTC+AGG | + | Chr4:75371804-75371823 | None:intergenic | 30.0% |
| AAGATTTACGAATGGGTGAA+TGG | + | Chr4:75371131-75371150 | None:intergenic | 35.0% | |
| AATGGTAATAGCAATGGTGA+TGG | - | Chr4:75371408-75371427 | MsG0480022673.01.T01:CDS | 35.0% | |
| ATGGGTGAATGGTAAATTGA+CGG | + | Chr4:75371120-75371139 | None:intergenic | 35.0% | |
| ATTGACGGAATTGATAGATC+AGG | + | Chr4:75371105-75371124 | None:intergenic | 35.0% | |
| CAACCTACATTGAGAATTCT+AGG | - | Chr4:75371564-75371583 | MsG0480022673.01.T01:CDS | 35.0% | |
| CGATTTGATCAAATTCTCTC+CGG | + | Chr4:75371353-75371372 | None:intergenic | 35.0% | |
| GAATGTGAAGAATCTCCAAA+GGG | - | Chr4:75371498-75371517 | MsG0480022673.01.T01:CDS | 35.0% | |
| GGAGAAGAAGATTTACGAAT+GGG | + | Chr4:75371138-75371157 | None:intergenic | 35.0% | |
| TGAATGTGAAGAATCTCCAA+AGG | - | Chr4:75371497-75371516 | MsG0480022673.01.T01:CDS | 35.0% | |
| TGCAGAAAACATGAGGAATT+TGG | - | Chr4:75371458-75371477 | MsG0480022673.01.T01:CDS | 35.0% | |
| TGGAGAAGAAGATTTACGAA+TGG | + | Chr4:75371139-75371158 | None:intergenic | 35.0% | |
| TGTCCTAGAATTCTCAATGT+AGG | + | Chr4:75371570-75371589 | None:intergenic | 35.0% | |
| TTCACCTCTTGAGATATCAA+TGG | + | Chr4:75371606-75371625 | None:intergenic | 35.0% | |
| TTGACGGAATTGATAGATCA+GGG | + | Chr4:75371104-75371123 | None:intergenic | 35.0% | |
| TTTGGAGATTCTTCACATTC+AGG | + | Chr4:75371498-75371517 | None:intergenic | 35.0% | |
| ! | GAAGTATTTCCCAAGGTAAA+GGG | + | Chr4:75371545-75371564 | None:intergenic | 35.0% |
| ! | TGAAGTATTTCCCAAGGTAA+AGG | + | Chr4:75371546-75371565 | None:intergenic | 35.0% |
| !! | CTAGCTCTAAGTAATGGTAA+TGG | - | Chr4:75371390-75371409 | MsG0480022673.01.T01:CDS | 35.0% |
| !! | GAGAAGTATTTCAGGTTTCT+TGG | + | Chr4:75371796-75371815 | None:intergenic | 35.0% |
| !! | GTTTAGTGGATTTAACAGCA+AGG | + | Chr4:75371209-75371228 | None:intergenic | 35.0% |
| !! | TTAGAGCTAGAGTATTGTTG+AGG | + | Chr4:75371380-75371399 | None:intergenic | 35.0% |
| AAATGTCAACACACCTACCA+AGG | - | Chr4:75371770-75371789 | MsG0480022673.01.T01:CDS | 40.0% | |
| AGGAAGTTGCAGAAAACATG+AGG | - | Chr4:75371451-75371470 | MsG0480022673.01.T01:CDS | 40.0% | |
| AGGTGAAATTACACCAACAG+AGG | + | Chr4:75371172-75371191 | None:intergenic | 40.0% | |
| GGATAGAATCCCTTTACCTT+GGG | - | Chr4:75371533-75371552 | MsG0480022673.01.T01:CDS | 40.0% | |
| GGTGAAATTACACCAACAGA+GGG | + | Chr4:75371171-75371190 | None:intergenic | 40.0% | |
| GTGAAATTACACCAACAGAG+GGG | + | Chr4:75371170-75371189 | None:intergenic | 40.0% | |
| TCAGGGATAGTAACAAGAAG+AGG | + | Chr4:75371087-75371106 | None:intergenic | 40.0% | |
| TGCAAGAGCTTCTCATGATT+TGG | - | Chr4:75371659-75371678 | MsG0480022673.01.T01:CDS | 40.0% | |
| ! | CTCAAGCAATACTTGCTACA+AGG | - | Chr4:75371685-75371704 | MsG0480022673.01.T01:CDS | 40.0% |
| ! | CTTGTAGCAAGTATTGCTTG+AGG | + | Chr4:75371687-75371706 | None:intergenic | 40.0% |
| ! | GAATTTTGCAGATTTGCAGC+CGG | - | Chr4:75371303-75371322 | MsG0480022673.01.T01:CDS | 40.0% |
| ! | GTAGGTTGAAGTATTTCCCA+AGG | + | Chr4:75371552-75371571 | None:intergenic | 40.0% |
| ! | GTCTCATTCAGCTTGATAAC+AGG | - | Chr4:75371709-75371728 | MsG0480022673.01.T01:CDS | 40.0% |
| ! | TCAGCTTGATAACAGGACTA+GGG | - | Chr4:75371716-75371735 | MsG0480022673.01.T01:CDS | 40.0% |
| ! | TTCAGCTTGATAACAGGACT+AGG | - | Chr4:75371715-75371734 | MsG0480022673.01.T01:CDS | 40.0% |
| !! | GAAAGATGCTGCTTCTTTTG+CGG | - | Chr4:75371623-75371642 | MsG0480022673.01.T01:CDS | 40.0% |
| !! | TATTTCAGGTTTCTTGGCCT+TGG | + | Chr4:75371790-75371809 | None:intergenic | 40.0% |
| AATTCAAGCTTGGACCAGGA+AGG | + | Chr4:75371288-75371307 | None:intergenic | 45.0% | |
| AGATCTCACATATGCCTTCC+TGG | - | Chr4:75371271-75371290 | MsG0480022673.01.T01:CDS | 45.0% | |
| ATCGTAAAGCCAGTGACAGA+GGG | + | Chr4:75370893-75370912 | None:intergenic | 45.0% | |
| ATTACACCAACAGAGGGGTT+AGG | + | Chr4:75371165-75371184 | None:intergenic | 45.0% | |
| CTCCAAAGGGAATTGCGAAA+GGG | - | Chr4:75371511-75371530 | MsG0480022673.01.T01:CDS | 45.0% | |
| GCAAAATTCAAGCTTGGACC+AGG | + | Chr4:75371292-75371311 | None:intergenic | 45.0% | |
| GGGATAGAATCCCTTTACCT+TGG | - | Chr4:75371532-75371551 | MsG0480022673.01.T01:CDS | 45.0% | |
| GGGTCCATTGATATCTCAAG+AGG | - | Chr4:75371599-75371618 | MsG0480022673.01.T01:CDS | 45.0% | |
| GTGGATTTAACAGCAAGGTG+AGG | + | Chr4:75371204-75371223 | None:intergenic | 45.0% | |
| TAAGAGAACAGCTTCGAAGC+CGG | + | Chr4:75371025-75371044 | None:intergenic | 45.0% | |
| TATCGTAAAGCCAGTGACAG+AGG | + | Chr4:75370894-75370913 | None:intergenic | 45.0% | |
| TCCAAAGGGAATTGCGAAAG+GGG | - | Chr4:75371512-75371531 | MsG0480022673.01.T01:CDS | 45.0% | |
| TCTCCAAAGGGAATTGCGAA+AGG | - | Chr4:75371510-75371529 | MsG0480022673.01.T01:CDS | 45.0% | |
| TGAGAGTGAGGTTGAGATTG+AGG | - | Chr4:75371431-75371450 | MsG0480022673.01.T01:CDS | 45.0% | |
| TGATCAAATTCTCTCCGGCA+GGG | + | Chr4:75371348-75371367 | None:intergenic | 45.0% | |
| TTACACCAACAGAGGGGTTA+GGG | + | Chr4:75371164-75371183 | None:intergenic | 45.0% | |
| TTGATCAAATTCTCTCCGGC+AGG | + | Chr4:75371349-75371368 | None:intergenic | 45.0% | |
| ! | ACCAGCACGCGATTTAGTTT+CGG | + | Chr4:75371061-75371080 | None:intergenic | 45.0% |
| ! | ATTTAGTTTCGGCGGCGTAA+AGG | + | Chr4:75371050-75371069 | None:intergenic | 45.0% |
| ! | TTTAGTTTCGGCGGCGTAAA+GGG | + | Chr4:75371049-75371068 | None:intergenic | 45.0% |
| !! | ATGCTGCTTCTTTTGCGGTT+AGG | - | Chr4:75371628-75371647 | MsG0480022673.01.T01:CDS | 45.0% |
| ACAGCAAGGTGAGGTTCAAG+AGG | + | Chr4:75371195-75371214 | None:intergenic | 50.0% | |
| ACTAAACGTGCCTCCATCGT+CGG | - | Chr4:75371222-75371241 | MsG0480022673.01.T01:CDS | 50.0% | |
| AGAGAAGAGGGATGAAGGAG+AGG | + | Chr4:75370954-75370973 | None:intergenic | 50.0% | |
| ATGAAGAGCAACACCGACGA+TGG | + | Chr4:75371238-75371257 | None:intergenic | 50.0% | |
| TCCCCTTTCGCAATTCCCTT+TGG | + | Chr4:75371516-75371535 | None:intergenic | 50.0% | |
| TCCTTCATCCCTCTTCTCTC+CGG | - | Chr4:75370955-75370974 | MsG0480022673.01.T01:CDS | 50.0% | |
| TCGTAAAGCCAGTGACAGAG+GGG | + | Chr4:75370892-75370911 | None:intergenic | 50.0% | |
| TGAAGGAGAGGACAACGAGA+CGG | + | Chr4:75370942-75370961 | None:intergenic | 50.0% | |
| ! | AGCACGCGATTTAGTTTCGG+CGG | + | Chr4:75371058-75371077 | None:intergenic | 50.0% |
| ! | TTGAGGAGAGGGAGTGGATT+CGG | + | Chr4:75370744-75370763 | None:intergenic | 50.0% |
| !! | CAATGGTGATGGTGAGAGTG+AGG | - | Chr4:75371419-75371438 | MsG0480022673.01.T01:CDS | 50.0% |
| !! | TCAGGTTTCTTGGCCTTGGT+AGG | + | Chr4:75371786-75371805 | None:intergenic | 50.0% |
| AACGAGACGGAGGTGAGGAT+CGG | + | Chr4:75370929-75370948 | None:intergenic | 55.0% | |
| AAGAGCAACACCGACGATGG+AGG | + | Chr4:75371235-75371254 | None:intergenic | 55.0% | |
| AAGCCAGTGACAGAGGGGAT+CGG | + | Chr4:75370887-75370906 | None:intergenic | 55.0% | |
| ACCGGAGAGAAGAGGGATGA+AGG | + | Chr4:75370959-75370978 | None:intergenic | 55.0% | |
| AGGAGAGGAGTGAGAGAGCA+GGG | + | Chr4:75370816-75370835 | None:intergenic | 55.0% | |
| AGGTAGAGACCGGAGAGAAG+AGG | + | Chr4:75370967-75370986 | None:intergenic | 55.0% | |
| CCAAACCCTAACCCCTCTGT+TGG | - | Chr4:75371156-75371175 | MsG0480022673.01.T01:CDS | 55.0% | |
| CCAACAGAGGGGTTAGGGTT+TGG | + | Chr4:75371159-75371178 | None:intergenic | 55.0% | |
| GCAAGGTGAGGTTCAAGAGG+AGG | + | Chr4:75371192-75371211 | None:intergenic | 55.0% | |
| GCCGAAACTAAATCGCGTGC+TGG | - | Chr4:75371057-75371076 | MsG0480022673.01.T01:CDS | 55.0% | |
| GGTAGAGACCGGAGAGAAGA+GGG | + | Chr4:75370966-75370985 | None:intergenic | 55.0% | |
| GGTAGGGAGGATTGAGGAGA+GGG | + | Chr4:75370755-75370774 | None:intergenic | 55.0% | |
| GTGGATCGGAGGAATGGACA+CGG | + | Chr4:75370993-75371012 | None:intergenic | 55.0% | |
| TGGATCGGAGGAATGGACAC+GGG | + | Chr4:75370992-75371011 | None:intergenic | 55.0% | |
| TTGCAGATTTGCAGCCGGCT+GGG | - | Chr4:75371308-75371327 | MsG0480022673.01.T01:CDS | 55.0% | |
| TTTGCAGATTTGCAGCCGGC+TGG | - | Chr4:75371307-75371326 | MsG0480022673.01.T01:CDS | 55.0% | |
| ! | AGAGAGTGGAGGTGTGGGTA+GGG | + | Chr4:75370771-75370790 | None:intergenic | 55.0% |
| ! | AGAGGGAGTGGATTCGGGAA+CGG | + | Chr4:75370738-75370757 | None:intergenic | 55.0% |
| ! | GACGATGGAGGCACGTTTAG+TGG | + | Chr4:75371223-75371242 | None:intergenic | 55.0% |
| ! | TGAGGAGAGGGAGTGGATTC+GGG | + | Chr4:75370743-75370762 | None:intergenic | 55.0% |
| !! | TCGGGAACGGGCTTTGGAAA+CGG | + | Chr4:75370725-75370744 | None:intergenic | 55.0% |
| AACAGCTTCGAAGCCGGCGA+GGG | + | Chr4:75371019-75371038 | None:intergenic | 60.0% | |
| ACTCCGATCCCCTCTGTCAC+TGG | - | Chr4:75370881-75370900 | MsG0480022673.01.T01:CDS | 60.0% | |
| AGGACAACGAGACGGAGGTG+AGG | + | Chr4:75370934-75370953 | None:intergenic | 60.0% | |
| AGGAGAGGACAACGAGACGG+AGG | + | Chr4:75370939-75370958 | None:intergenic | 60.0% | |
| AGTGACAGAGGGGATCGGAG+TGG | + | Chr4:75370882-75370901 | None:intergenic | 60.0% | |
| ATCGGAGTGGGAACCGGAGA+GGG | + | Chr4:75370869-75370888 | None:intergenic | 60.0% | |
| GACACGGGAGAGGTAGAGAC+CGG | + | Chr4:75370977-75370996 | None:intergenic | 60.0% | |
| GAGGAGAGGAGTGAGAGAGC+AGG | + | Chr4:75370817-75370836 | None:intergenic | 60.0% | |
| GGAGGATTGAGGAGAGGGAG+TGG | + | Chr4:75370750-75370769 | None:intergenic | 60.0% | |
| GGGAAGGTGGATCGGAGGAA+TGG | + | Chr4:75370999-75371018 | None:intergenic | 60.0% | |
| GGGTAGGGAGGATTGAGGAG+AGG | + | Chr4:75370756-75370775 | None:intergenic | 60.0% | |
| GGTGTGGGTAGGGAGGATTG+AGG | + | Chr4:75370761-75370780 | None:intergenic | 60.0% | |
| GTGACAGAGGGGATCGGAGT+GGG | + | Chr4:75370881-75370900 | None:intergenic | 60.0% | |
| ! | AGGGGAGAGAGTGGAGGTGT+GGG | + | Chr4:75370776-75370795 | None:intergenic | 60.0% |
| ! | GAGAGAGTGGAGGTGTGGGT+AGG | + | Chr4:75370772-75370791 | None:intergenic | 60.0% |
| ! | GAGGGAGTGGATTCGGGAAC+GGG | + | Chr4:75370737-75370756 | None:intergenic | 60.0% |
| ! | GAGTGAGAGAGCAGGGCGTT+CGG | + | Chr4:75370809-75370828 | None:intergenic | 60.0% |
| ! | GTGGATTCGGGAACGGGCTT+TGG | + | Chr4:75370731-75370750 | None:intergenic | 60.0% |
| AACCGGAGAGGGAGGAGGAG+AGG | + | Chr4:75370858-75370877 | None:intergenic | 65.0% | |
| ACAATCCTGACCGGCCCAGC+CGG | + | Chr4:75371325-75371344 | None:intergenic | 65.0% | |
| ACCGGAGAGGGAGGAGGAGA+GGG | + | Chr4:75370857-75370876 | None:intergenic | 65.0% | |
| AGAGGGCGGAGTAAGCGGTG+GGG | + | Chr4:75370840-75370859 | None:intergenic | 65.0% | |
| AGATTTGCAGCCGGCTGGGC+CGG | - | Chr4:75371312-75371331 | MsG0480022673.01.T01:CDS | 65.0% | |
| AGTAAGCGGTGGGGGAGGAG+AGG | + | Chr4:75370831-75370850 | None:intergenic | 65.0% | |
| CCGGCAGGGACAATCCTGAC+CGG | + | Chr4:75371334-75371353 | None:intergenic | 65.0% | |
| CCGGTCAGGATTGTCCCTGC+CGG | - | Chr4:75371331-75371350 | MsG0480022673.01.T01:CDS | 65.0% | |
| CGGAGGAATGGACACGGGAG+AGG | + | Chr4:75370987-75371006 | None:intergenic | 65.0% | |
| GAACAGCTTCGAAGCCGGCG+AGG | + | Chr4:75371020-75371039 | None:intergenic | 65.0% | |
| GAGACGGAGGTGAGGATCGG+AGG | + | Chr4:75370926-75370945 | None:intergenic | 65.0% | |
| GAGAGGGCGGAGTAAGCGGT+GGG | + | Chr4:75370841-75370860 | None:intergenic | 65.0% | |
| GAGGGGAGAGAGTGGAGGTG+TGG | + | Chr4:75370777-75370796 | None:intergenic | 65.0% | |
| GAGGGGATCGGAGTGGGAAC+CGG | + | Chr4:75370875-75370894 | None:intergenic | 65.0% | |
| GATCGGAGTGGGAACCGGAG+AGG | + | Chr4:75370870-75370889 | None:intergenic | 65.0% | |
| GGAGGAGAGGGCGGAGTAAG+CGG | + | Chr4:75370845-75370864 | None:intergenic | 65.0% | |
| GGAGGTGAGGATCGGAGGAG+AGG | + | Chr4:75370921-75370940 | None:intergenic | 65.0% | |
| TCCGATCCACCTTCCCTCGC+CGG | - | Chr4:75371003-75371022 | MsG0480022673.01.T01:CDS | 65.0% | |
| ! | GAGAGCAGGGCGTTCGGAGT+CGG | + | Chr4:75370803-75370822 | None:intergenic | 65.0% |
| ! | GAGTGGAGGTGTGGGTAGGG+AGG | + | Chr4:75370768-75370787 | None:intergenic | 65.0% |
| GAGGGCGGAGTAAGCGGTGG+GGG | + | Chr4:75370839-75370858 | None:intergenic | 70.0% | |
| GCCCTCTCCTCCTCCCTCTC+CGG | - | Chr4:75370853-75370872 | MsG0480022673.01.T01:CDS | 70.0% | |
| GCCGGCGAGGGAAGGTGGAT+CGG | + | Chr4:75371007-75371026 | None:intergenic | 70.0% | |
| GCGTTCGGAGTCGGCGAGAG+GGG | + | Chr4:75370794-75370813 | None:intergenic | 70.0% | |
| GCTTCGAAGCCGGCGAGGGA+AGG | + | Chr4:75371015-75371034 | None:intergenic | 70.0% | |
| GGAGAGGGAGGAGGAGAGGG+CGG | + | Chr4:75370854-75370873 | None:intergenic | 70.0% | |
| GGAGAGGGCGGAGTAAGCGG+TGG | + | Chr4:75370842-75370861 | None:intergenic | 70.0% | |
| GGAGTGGGAACCGGAGAGGG+AGG | + | Chr4:75370866-75370885 | None:intergenic | 70.0% | |
| GGCGAGAGGGGAGAGAGTGG+AGG | + | Chr4:75370782-75370801 | None:intergenic | 70.0% | |
| GGCGAGGGAAGGTGGATCGG+AGG | + | Chr4:75371004-75371023 | None:intergenic | 70.0% | |
| GGCGTTCGGAGTCGGCGAGA+GGG | + | Chr4:75370795-75370814 | None:intergenic | 70.0% | |
| GTCGGCGAGAGGGGAGAGAG+TGG | + | Chr4:75370785-75370804 | None:intergenic | 70.0% | |
| GTGGGAACCGGAGAGGGAGG+AGG | + | Chr4:75370863-75370882 | None:intergenic | 70.0% | |
| TCGAAGCCGGCGAGGGAAGG+TGG | + | Chr4:75371012-75371031 | None:intergenic | 70.0% | |
| GGCGGAGTAAGCGGTGGGGG+AGG | + | Chr4:75370836-75370855 | None:intergenic | 75.0% | |
| GGGCGTTCGGAGTCGGCGAG+AGG | + | Chr4:75370796-75370815 | None:intergenic | 75.0% | |
| ! | TGCAGCCGGCTGGGCCGGTC+AGG | - | Chr4:75371317-75371336 | MsG0480022673.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 75370703 | 75371827 | 75370703 | ID=MsG0480022673.01;Name=MsG0480022673.01 |
| Chr4 | mRNA | 75370703 | 75371827 | 75370703 | ID=MsG0480022673.01.T01;Parent=MsG0480022673.01;Name=MsG0480022673.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|374 |
| Chr4 | exon | 75370703 | 75371827 | 75370703 | ID=MsG0480022673.01.T01:exon:3228;Parent=MsG0480022673.01.T01 |
| Chr4 | CDS | 75370703 | 75371827 | 75370703 | ID=MsG0480022673.01.T01:cds;Parent=MsG0480022673.01.T01 |
| Gene Sequence |
| Protein sequence |
