Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022848.01.T01 | RHN42283.1 | 94.62 | 316 | 14 | 2 | 1 | 316 | 1 | 313 | 0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022848.01.T01 | Q9LS48 | 59.441 | 286 | 112 | 2 | 30 | 315 | 33 | 314 | 3.34E-109 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022848.01.T01 | A0A396GP52 | 94.620 | 316 | 14 | 2 | 1 | 316 | 1 | 313 | 0.0 | 567 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780040867.01 | MsG0480022848.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022848.01.T01 | MTR_7g100328 | 32.317 | 328 | 173 | 8 | 4 | 301 | 20 | 328 | 2.83e-44 | 155 |
| MsG0480022848.01.T01 | MTR_3g095070 | 39.583 | 192 | 116 | 0 | 110 | 301 | 115 | 306 | 8.05e-43 | 150 |
| MsG0480022848.01.T01 | MTR_1g067600 | 28.881 | 277 | 178 | 6 | 41 | 301 | 61 | 334 | 2.87e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022848.01.T01 | AT3G18420 | 59.441 | 286 | 112 | 2 | 30 | 315 | 33 | 314 | 3.41e-110 | 323 |
| MsG0480022848.01.T01 | AT4G39470 | 33.014 | 209 | 139 | 1 | 93 | 301 | 107 | 314 | 3.61e-41 | 146 |
| MsG0480022848.01.T01 | AT3G53560 | 40.741 | 189 | 107 | 2 | 108 | 293 | 119 | 305 | 4.89e-40 | 143 |
| MsG0480022848.01.T01 | AT5G02590 | 33.916 | 286 | 165 | 6 | 28 | 301 | 38 | 311 | 7.10e-40 | 142 |
| MsG0480022848.01.T01 | AT2G37400 | 35.833 | 240 | 144 | 4 | 57 | 293 | 73 | 305 | 7.96e-40 | 142 |
| MsG0480022848.01.T01 | AT3G53560 | 40.741 | 189 | 107 | 2 | 108 | 293 | 167 | 353 | 1.00e-39 | 144 |
| MsG0480022848.01.T01 | AT3G09490 | 30.769 | 195 | 130 | 2 | 102 | 293 | 96 | 288 | 3.65e-26 | 106 |
Find 85 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGTGATGGTGGGATTA+AGG | 0.192163 | 4:+77519390 | None:intergenic |
| AATTTCCACTCTGTTTCTTC+TGG | 0.249137 | 4:+77518987 | None:intergenic |
| CGGAATAACGTCTCCCTTAT+CGG | 0.263551 | 4:-77519129 | MsG0480022848.01.T01:CDS |
| CCATCAACCTCAAATTTCTT+AGG | 0.268921 | 4:+77518561 | None:intergenic |
| TTGTCAAGGATCAAAGATTT+TGG | 0.273449 | 4:-77518522 | MsG0480022848.01.T01:CDS |
| ATGGAGAAAGAGGGTGAATT+GGG | 0.273975 | 4:+77519419 | None:intergenic |
| TTTGAGGTGGTGCAGGATGG+GGG | 0.304462 | 4:+77519295 | None:intergenic |
| GAAGAATGTTGATGAAGCTT+TGG | 0.327821 | 4:-77518715 | MsG0480022848.01.T01:CDS |
| CCTAAGAAATTTGAGGTTGA+TGG | 0.346694 | 4:-77518561 | MsG0480022848.01.T01:CDS |
| GATGGAGAAAGAGGGTGAAT+TGG | 0.350227 | 4:+77519418 | None:intergenic |
| GGAACAGTTTGCTAAGTATA+AGG | 0.351979 | 4:-77518592 | MsG0480022848.01.T01:CDS |
| GTTGGTGATGGTGGGATTAA+GGG | 0.358194 | 4:+77519391 | None:intergenic |
| AGTTGCAGTGGAAGACAATA+AGG | 0.362038 | 4:-77518790 | MsG0480022848.01.T01:CDS |
| CGGTGGTGGTTCGGCTCTGG+CGG | 0.363919 | 4:+77519205 | None:intergenic |
| TGGTGGTTCGGCTCTGGCGG+GGG | 0.367612 | 4:+77519208 | None:intergenic |
| CGATAAGGGAGACGTTATTC+CGG | 0.375327 | 4:+77519130 | None:intergenic |
| TGCAAGGTTAACAATCGAAA+TGG | 0.400291 | 4:-77518958 | MsG0480022848.01.T01:CDS |
| AGAAGGGGTGTTGGTGATGG+TGG | 0.403554 | 4:+77519382 | None:intergenic |
| GGTGGTGGTTCGGCTCTGGC+GGG | 0.413351 | 4:+77519206 | None:intergenic |
| AAATAAGGTCTAAAATCATT+AGG | 0.416811 | 4:+77518663 | None:intergenic |
| AAGAATGTTGATGAAGCTTT+GGG | 0.419777 | 4:-77518714 | MsG0480022848.01.T01:CDS |
| GAATGTAAATGCGGCGGTGG+TGG | 0.423436 | 4:+77519238 | None:intergenic |
| GTGGTGGTTCGGCTCTGGCG+GGG | 0.426501 | 4:+77519207 | None:intergenic |
| AGAGGGTGAATTGGGGATAG+TGG | 0.430807 | 4:+77519427 | None:intergenic |
| TAAAGACTTCAGAGCTTCAA+TGG | 0.439651 | 4:+77519082 | None:intergenic |
| GGGAAATTGAGAAGGGGTGT+TGG | 0.443788 | 4:+77519373 | None:intergenic |
| GGTGAGTGTCGGTGGTGGTT+CGG | 0.445769 | 4:+77519196 | None:intergenic |
| TGTCGGTGGTGGTTCGGCTC+TGG | 0.446518 | 4:+77519202 | None:intergenic |
| AATCTTTGATCCTTGACAAA+GGG | 0.446878 | 4:+77518526 | None:intergenic |
| GTTGGAAGATTGAGCTTTGA+CGG | 0.447194 | 4:+77519319 | None:intergenic |
| AAGGGATGTGAAGTTGATAA+TGG | 0.450821 | 4:-77518757 | MsG0480022848.01.T01:CDS |
| CGTTTCGAGGAATTCCGATA+AGG | 0.451133 | 4:+77519115 | None:intergenic |
| TGAAGAGTGCTGCTCCGGCT+AGG | 0.454190 | 4:+77519270 | None:intergenic |
| GAAGGGGTGTTGGTGATGGT+GGG | 0.461310 | 4:+77519383 | None:intergenic |
| TGGATTCATTGTTCGTTTCG+AGG | 0.468784 | 4:+77519102 | None:intergenic |
| TTGATGGACCGTTGCGGAGA+AGG | 0.474318 | 4:-77518849 | MsG0480022848.01.T01:CDS |
| GTTTCGAGGAATTCCGATAA+GGG | 0.474777 | 4:+77519116 | None:intergenic |
| CACCACCTCAAAACCCTAGC+CGG | 0.480396 | 4:-77519284 | MsG0480022848.01.T01:CDS |
| GGTGGCGTATAGAGCGGAGA+GGG | 0.481627 | 4:+77519351 | None:intergenic |
| AAGGGATGGGATGGAGAAAG+AGG | 0.491840 | 4:+77519409 | None:intergenic |
| GAAGAGTGCTGCTCCGGCTA+GGG | 0.492410 | 4:+77519271 | None:intergenic |
| AAATGCGGCGGTGGTGGTTG+CGG | 0.501949 | 4:+77519244 | None:intergenic |
| TGAAGCTTTGGGTCTGTATG+AGG | 0.504935 | 4:-77518703 | MsG0480022848.01.T01:CDS |
| CTAAGAAATTTGAGGTTGAT+GGG | 0.506673 | 4:-77518560 | MsG0480022848.01.T01:CDS |
| TGATGGACCGTTGCGGAGAA+GGG | 0.506719 | 4:-77518848 | MsG0480022848.01.T01:CDS |
| GGCAGTGAAGAGTGCTGCTC+CGG | 0.515486 | 4:+77519265 | None:intergenic |
| GTCAGTTTCGTCGATGACTT+CGG | 0.516090 | 4:+77519175 | None:intergenic |
| GCAAGGTTAACAATCGAAAT+GGG | 0.519589 | 4:-77518957 | MsG0480022848.01.T01:CDS |
| TTGAGAAGGGGTGTTGGTGA+TGG | 0.521864 | 4:+77519379 | None:intergenic |
| GGGGAATGTAAATGCGGCGG+TGG | 0.527417 | 4:+77519235 | None:intergenic |
| CGTTATTCCGGCGTCGGTGT+CGG | 0.527964 | 4:+77519142 | None:intergenic |
| AAAGCGCTTCGAAGGAAAGC+GGG | 0.530830 | 4:+77518886 | None:intergenic |
| GGTGGGATTAAGGGATGGGA+TGG | 0.533649 | 4:+77519400 | None:intergenic |
| GAGCTTTGACGGTGATTCGA+CGG | 0.534374 | 4:+77519330 | None:intergenic |
| ATTGTCACCTAAGAAATTTG+AGG | 0.539157 | 4:-77518568 | MsG0480022848.01.T01:CDS |
| TGGAGAAAGAGGGTGAATTG+GGG | 0.546028 | 4:+77519420 | None:intergenic |
| TGATAAGAATGATGAAGCTA+AGG | 0.546275 | 4:-77518613 | MsG0480022848.01.T01:CDS |
| TGATGGTGGGATTAAGGGAT+GGG | 0.549120 | 4:+77519396 | None:intergenic |
| AGGGATGGGATGGAGAAAGA+GGG | 0.553586 | 4:+77519410 | None:intergenic |
| ATTGGGGATAGTGGAAATCA+TGG | 0.563605 | 4:+77519436 | None:intergenic |
| GTGATGGTGGGATTAAGGGA+TGG | 0.565738 | 4:+77519395 | None:intergenic |
| ATTTGAGAACCCCTTTGTCA+AGG | 0.570886 | 4:-77518536 | MsG0480022848.01.T01:CDS |
| ATCTTTGATCCTTGACAAAG+GGG | 0.572521 | 4:+77518527 | None:intergenic |
| CAGCTTCCCCTTCTCCGCAA+CGG | 0.578857 | 4:+77518841 | None:intergenic |
| AAATCTTTGATCCTTGACAA+AGG | 0.582789 | 4:+77518525 | None:intergenic |
| GTTGTCACCGACACCGACGC+CGG | 0.583227 | 4:-77519149 | MsG0480022848.01.T01:CDS |
| TCGATGACTTCGGTGAGTGT+CGG | 0.588546 | 4:+77519185 | None:intergenic |
| AGATGCTCTTAGAGTTGCAG+TGG | 0.595633 | 4:-77518802 | MsG0480022848.01.T01:CDS |
| CTTCAGCAGAAACTCGAACT+CGG | 0.597767 | 4:-77519059 | MsG0480022848.01.T01:CDS |
| GGAAGCGGGGAATGTAAATG+CGG | 0.598799 | 4:+77519229 | None:intergenic |
| GATGGACCGTTGCGGAGAAG+GGG | 0.602730 | 4:-77518847 | MsG0480022848.01.T01:CDS |
| ACTTCGGTGAGTGTCGGTGG+TGG | 0.606002 | 4:+77519191 | None:intergenic |
| TGGCGTATAGAGCGGAGAGG+GGG | 0.606568 | 4:+77519353 | None:intergenic |
| GGGAGACGTTATTCCGGCGT+CGG | 0.617229 | 4:+77519136 | None:intergenic |
| ATGACTTCGGTGAGTGTCGG+TGG | 0.636946 | 4:+77519188 | None:intergenic |
| GTGGCGTATAGAGCGGAGAG+GGG | 0.641767 | 4:+77519352 | None:intergenic |
| AAAAGCGCTTCGAAGGAAAG+CGG | 0.644206 | 4:+77518885 | None:intergenic |
| AAGGGGAAGCTGTAATTGAG+AGG | 0.645304 | 4:-77518830 | MsG0480022848.01.T01:CDS |
| AGTGGAAATTCATCGCTGCA+AGG | 0.647296 | 4:-77518974 | MsG0480022848.01.T01:CDS |
| CTTTGACGGTGATTCGACGG+TGG | 0.663599 | 4:+77519333 | None:intergenic |
| AGCGGGGAATGTAAATGCGG+CGG | 0.663854 | 4:+77519232 | None:intergenic |
| TTCGACGGTGGCGTATAGAG+CGG | 0.680327 | 4:+77519345 | None:intergenic |
| TGCAACCAGAAGAAACAGAG+TGG | 0.703961 | 4:-77518992 | MsG0480022848.01.T01:CDS |
| TTCGTCGTAGAAACTTCGCG+CGG | 0.730895 | 4:+77518923 | None:intergenic |
| CGGTGGCGTATAGAGCGGAG+AGG | 0.737918 | 4:+77519350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAGGTCTAAAATCATT+AGG | + | Chr4:77519280-77519299 | None:intergenic | 20.0% |
| !!! | ATTTTAGACCTTATTTTTGC+AGG | - | Chr4:77519284-77519303 | MsG0480022848.01.T01:CDS | 25.0% |
| !!! | TTTTAGACCTTATTTTTGCA+GGG | - | Chr4:77519285-77519304 | MsG0480022848.01.T01:CDS | 25.0% |
| AAATCTTTGATCCTTGACAA+AGG | + | Chr4:77519418-77519437 | None:intergenic | 30.0% | |
| AATCTTTGATCCTTGACAAA+GGG | + | Chr4:77519417-77519436 | None:intergenic | 30.0% | |
| ACAATAAGGAAAAAGAAGCA+AGG | - | Chr4:77519164-77519183 | MsG0480022848.01.T01:CDS | 30.0% | |
| ATTGTCACCTAAGAAATTTG+AGG | - | Chr4:77519372-77519391 | MsG0480022848.01.T01:CDS | 30.0% | |
| CAATAAGGAAAAAGAAGCAA+GGG | - | Chr4:77519165-77519184 | MsG0480022848.01.T01:CDS | 30.0% | |
| TGATAAGAATGATGAAGCTA+AGG | - | Chr4:77519327-77519346 | MsG0480022848.01.T01:CDS | 30.0% | |
| ! | AAGAATGTTGATGAAGCTTT+GGG | - | Chr4:77519226-77519245 | MsG0480022848.01.T01:CDS | 30.0% |
| ! | CTAAGAAATTTGAGGTTGAT+GGG | - | Chr4:77519380-77519399 | MsG0480022848.01.T01:CDS | 30.0% |
| ! | TTGTCAAGGATCAAAGATTT+TGG | - | Chr4:77519418-77519437 | MsG0480022848.01.T01:CDS | 30.0% |
| !!! | TTTAGACCTTATTTTTGCAG+GGG | - | Chr4:77519286-77519305 | MsG0480022848.01.T01:CDS | 30.0% |
| ATCATTCCCCTGCAAAAATA+AGG | + | Chr4:77519295-77519314 | None:intergenic | 35.0% | |
| ATCTTTGATCCTTGACAAAG+GGG | + | Chr4:77519416-77519435 | None:intergenic | 35.0% | |
| CCATCAACCTCAAATTTCTT+AGG | + | Chr4:77519382-77519401 | None:intergenic | 35.0% | |
| GCAAGGTTAACAATCGAAAT+GGG | - | Chr4:77518983-77519002 | MsG0480022848.01.T01:CDS | 35.0% | |
| TAAAGACTTCAGAGCTTCAA+TGG | + | Chr4:77518861-77518880 | None:intergenic | 35.0% | |
| TGCAAGGTTAACAATCGAAA+TGG | - | Chr4:77518982-77519001 | MsG0480022848.01.T01:CDS | 35.0% | |
| ! | AATTTCCACTCTGTTTCTTC+TGG | + | Chr4:77518956-77518975 | None:intergenic | 35.0% |
| ! | CCTAAGAAATTTGAGGTTGA+TGG | - | Chr4:77519379-77519398 | MsG0480022848.01.T01:CDS | 35.0% |
| ! | GAAGAATGTTGATGAAGCTT+TGG | - | Chr4:77519225-77519244 | MsG0480022848.01.T01:CDS | 35.0% |
| !! | AAGGGATGTGAAGTTGATAA+TGG | - | Chr4:77519183-77519202 | MsG0480022848.01.T01:CDS | 35.0% |
| !! | GGAACAGTTTGCTAAGTATA+AGG | - | Chr4:77519348-77519367 | MsG0480022848.01.T01:CDS | 35.0% |
| AGTTGCAGTGGAAGACAATA+AGG | - | Chr4:77519150-77519169 | MsG0480022848.01.T01:CDS | 40.0% | |
| ATGGAGAAAGAGGGTGAATT+GGG | + | Chr4:77518524-77518543 | None:intergenic | 40.0% | |
| ATTTGAGAACCCCTTTGTCA+AGG | - | Chr4:77519404-77519423 | MsG0480022848.01.T01:CDS | 40.0% | |
| GTTTCGAGGAATTCCGATAA+GGG | + | Chr4:77518827-77518846 | None:intergenic | 40.0% | |
| TGGATTCATTGTTCGTTTCG+AGG | + | Chr4:77518841-77518860 | None:intergenic | 40.0% | |
| ! | GCAACGAGATCAAGTTTTTG+AGG | + | Chr4:77518931-77518950 | None:intergenic | 40.0% |
| ! | GTTGGAAGATTGAGCTTTGA+CGG | + | Chr4:77518624-77518643 | None:intergenic | 40.0% |
| ! | TTTCGAAAACGCGCTTTTGA+TGG | - | Chr4:77519075-77519094 | MsG0480022848.01.T01:CDS | 40.0% |
| AAGGGGAAGCTGTAATTGAG+AGG | - | Chr4:77519110-77519129 | MsG0480022848.01.T01:CDS | 45.0% | |
| AGATGCTCTTAGAGTTGCAG+TGG | - | Chr4:77519138-77519157 | MsG0480022848.01.T01:CDS | 45.0% | |
| AGTGGAAATTCATCGCTGCA+AGG | - | Chr4:77518966-77518985 | MsG0480022848.01.T01:CDS | 45.0% | |
| CGATAAGGGAGACGTTATTC+CGG | + | Chr4:77518813-77518832 | None:intergenic | 45.0% | |
| CGGAATAACGTCTCCCTTAT+CGG | - | Chr4:77518811-77518830 | MsG0480022848.01.T01:CDS | 45.0% | |
| CGTTTCGAGGAATTCCGATA+AGG | + | Chr4:77518828-77518847 | None:intergenic | 45.0% | |
| CTTCAGCAGAAACTCGAACT+CGG | - | Chr4:77518881-77518900 | MsG0480022848.01.T01:CDS | 45.0% | |
| GATGGAGAAAGAGGGTGAAT+TGG | + | Chr4:77518525-77518544 | None:intergenic | 45.0% | |
| GTCAGTTTCGTCGATGACTT+CGG | + | Chr4:77518768-77518787 | None:intergenic | 45.0% | |
| TGCAACCAGAAGAAACAGAG+TGG | - | Chr4:77518948-77518967 | MsG0480022848.01.T01:CDS | 45.0% | |
| TGGAGAAAGAGGGTGAATTG+GGG | + | Chr4:77518523-77518542 | None:intergenic | 45.0% | |
| !! | AAAAGCGCTTCGAAGGAAAG+CGG | + | Chr4:77519058-77519077 | None:intergenic | 45.0% |
| !! | GTTGGTGATGGTGGGATTAA+GGG | + | Chr4:77518552-77518571 | None:intergenic | 45.0% |
| !! | TGAAGCTTTGGGTCTGTATG+AGG | - | Chr4:77519237-77519256 | MsG0480022848.01.T01:CDS | 45.0% |
| !! | TGATGGTGGGATTAAGGGAT+GGG | + | Chr4:77518547-77518566 | None:intergenic | 45.0% |
| !! | TGTTGGTGATGGTGGGATTA+AGG | + | Chr4:77518553-77518572 | None:intergenic | 45.0% |
| !!! | GTTTTCGAAAAGCGCTTCGA+AGG | + | Chr4:77519065-77519084 | None:intergenic | 45.0% |
| AAGGGATGGGATGGAGAAAG+AGG | + | Chr4:77518534-77518553 | None:intergenic | 50.0% | |
| AGAGGGTGAATTGGGGATAG+TGG | + | Chr4:77518516-77518535 | None:intergenic | 50.0% | |
| AGGGATGGGATGGAGAAAGA+GGG | + | Chr4:77518533-77518552 | None:intergenic | 50.0% | |
| GAGAGGGGGAAATTGAGAAG+GGG | + | Chr4:77518576-77518595 | None:intergenic | 50.0% | |
| GGAAGCGGGGAATGTAAATG+CGG | + | Chr4:77518714-77518733 | None:intergenic | 50.0% | |
| GGAGAGGGGGAAATTGAGAA+GGG | + | Chr4:77518577-77518596 | None:intergenic | 50.0% | |
| TCGATGACTTCGGTGAGTGT+CGG | + | Chr4:77518758-77518777 | None:intergenic | 50.0% | |
| TTCGTCGTAGAAACTTCGCG+CGG | + | Chr4:77519020-77519039 | None:intergenic | 50.0% | |
| ! | AAAGCGCTTCGAAGGAAAGC+GGG | + | Chr4:77519057-77519076 | None:intergenic | 50.0% |
| ! | GAGCTTTGACGGTGATTCGA+CGG | + | Chr4:77518613-77518632 | None:intergenic | 50.0% |
| ! | GGGAAATTGAGAAGGGGTGT+TGG | + | Chr4:77518570-77518589 | None:intergenic | 50.0% |
| !! | GTGATGGTGGGATTAAGGGA+TGG | + | Chr4:77518548-77518567 | None:intergenic | 50.0% |
| !! | TTGAGAAGGGGTGTTGGTGA+TGG | + | Chr4:77518564-77518583 | None:intergenic | 50.0% |
| !!! | GTTTTGAGGTGGTGCAGGAT+GGG | + | Chr4:77518650-77518669 | None:intergenic | 50.0% |
| !!! | TTTTGAGGTGGTGCAGGATG+GGG | + | Chr4:77518649-77518668 | None:intergenic | 50.0% |
| AGCGGGGAATGTAAATGCGG+CGG | + | Chr4:77518711-77518730 | None:intergenic | 55.0% | |
| CACCACCTCAAAACCCTAGC+CGG | - | Chr4:77518656-77518675 | MsG0480022848.01.T01:CDS | 55.0% | |
| CGGAGAGGGGGAAATTGAGA+AGG | + | Chr4:77518578-77518597 | None:intergenic | 55.0% | |
| CTTTGACGGTGATTCGACGG+TGG | + | Chr4:77518610-77518629 | None:intergenic | 55.0% | |
| GAATGTAAATGCGGCGGTGG+TGG | + | Chr4:77518705-77518724 | None:intergenic | 55.0% | |
| GGTGGGATTAAGGGATGGGA+TGG | + | Chr4:77518543-77518562 | None:intergenic | 55.0% | |
| TTCGACGGTGGCGTATAGAG+CGG | + | Chr4:77518598-77518617 | None:intergenic | 55.0% | |
| ! | TGATGGACCGTTGCGGAGAA+GGG | - | Chr4:77519092-77519111 | MsG0480022848.01.T01:CDS | 55.0% |
| ! | TTGATGGACCGTTGCGGAGA+AGG | - | Chr4:77519091-77519110 | MsG0480022848.01.T01:CDS | 55.0% |
| ! | TTTGAGGTGGTGCAGGATGG+GGG | + | Chr4:77518648-77518667 | None:intergenic | 55.0% |
| !! | AGAAGGGGTGTTGGTGATGG+TGG | + | Chr4:77518561-77518580 | None:intergenic | 55.0% |
| !! | ATGACTTCGGTGAGTGTCGG+TGG | + | Chr4:77518755-77518774 | None:intergenic | 55.0% |
| !! | GAAGGGGTGTTGGTGATGGT+GGG | + | Chr4:77518560-77518579 | None:intergenic | 55.0% |
| !! | GCGCTTTTGATGGACCGTTG+CGG | - | Chr4:77519085-77519104 | MsG0480022848.01.T01:CDS | 55.0% |
| !!! | CTAGGGTTTTGAGGTGGTGC+AGG | + | Chr4:77518655-77518674 | None:intergenic | 55.0% |
| !!! | GGTTTTGAGGTGGTGCAGGA+TGG | + | Chr4:77518651-77518670 | None:intergenic | 55.0% |
| CAGCTTCCCCTTCTCCGCAA+CGG | + | Chr4:77519102-77519121 | None:intergenic | 60.0% | |
| GATGGACCGTTGCGGAGAAG+GGG | - | Chr4:77519093-77519112 | MsG0480022848.01.T01:CDS | 60.0% | |
| GGGAGACGTTATTCCGGCGT+CGG | + | Chr4:77518807-77518826 | None:intergenic | 60.0% | |
| GGGGAATGTAAATGCGGCGG+TGG | + | Chr4:77518708-77518727 | None:intergenic | 60.0% | |
| GGTGGCGTATAGAGCGGAGA+GGG | + | Chr4:77518592-77518611 | None:intergenic | 60.0% | |
| GTGGCGTATAGAGCGGAGAG+GGG | + | Chr4:77518591-77518610 | None:intergenic | 60.0% | |
| TGGCGTATAGAGCGGAGAGG+GGG | + | Chr4:77518590-77518609 | None:intergenic | 60.0% | |
| ! | AAATGCGGCGGTGGTGGTTG+CGG | + | Chr4:77518699-77518718 | None:intergenic | 60.0% |
| ! | CTGCTCCGGCTAGGGTTTTG+AGG | + | Chr4:77518664-77518683 | None:intergenic | 60.0% |
| !! | ACTTCGGTGAGTGTCGGTGG+TGG | + | Chr4:77518752-77518771 | None:intergenic | 60.0% |
| !! | CGTTATTCCGGCGTCGGTGT+CGG | + | Chr4:77518801-77518820 | None:intergenic | 60.0% |
| !! | GAAGAGTGCTGCTCCGGCTA+GGG | + | Chr4:77518672-77518691 | None:intergenic | 60.0% |
| !! | GGCAGTGAAGAGTGCTGCTC+CGG | + | Chr4:77518678-77518697 | None:intergenic | 60.0% |
| !! | GGTGAGTGTCGGTGGTGGTT+CGG | + | Chr4:77518747-77518766 | None:intergenic | 60.0% |
| !! | TGAAGAGTGCTGCTCCGGCT+AGG | + | Chr4:77518673-77518692 | None:intergenic | 60.0% |
| !!! | CTCCGGCTAGGGTTTTGAGG+TGG | + | Chr4:77518661-77518680 | None:intergenic | 60.0% |
| CGGTGGCGTATAGAGCGGAG+AGG | + | Chr4:77518593-77518612 | None:intergenic | 65.0% | |
| GTGGTGCAGGATGGGGGAGT+TGG | + | Chr4:77518642-77518661 | None:intergenic | 65.0% | |
| GTTGTCACCGACACCGACGC+CGG | - | Chr4:77518791-77518810 | MsG0480022848.01.T01:CDS | 65.0% | |
| ! | TGTCGGTGGTGGTTCGGCTC+TGG | + | Chr4:77518741-77518760 | None:intergenic | 65.0% |
| ! | CGGTGGTGGTTCGGCTCTGG+CGG | + | Chr4:77518738-77518757 | None:intergenic | 70.0% |
| ! | GGTGGTGGTTCGGCTCTGGC+GGG | + | Chr4:77518737-77518756 | None:intergenic | 70.0% |
| ! | GTGGTGGTTCGGCTCTGGCG+GGG | + | Chr4:77518736-77518755 | None:intergenic | 70.0% |
| ! | TGGTGGTTCGGCTCTGGCGG+GGG | + | Chr4:77518735-77518754 | None:intergenic | 70.0% |
| ! | TTCGGCTCTGGCGGGGGAAG+CGG | + | Chr4:77518729-77518748 | None:intergenic | 70.0% |
| ! | TCGGCTCTGGCGGGGGAAGC+GGG | + | Chr4:77518728-77518747 | None:intergenic | 75.0% |
| !! | CGGCTCTGGCGGGGGAAGCG+GGG | + | Chr4:77518727-77518746 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 77518506 | 77519456 | 77518506 | ID=MsG0480022848.01;Name=MsG0480022848.01 |
| Chr4 | mRNA | 77518506 | 77519456 | 77518506 | ID=MsG0480022848.01.T01;Parent=MsG0480022848.01;Name=MsG0480022848.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|316 |
| Chr4 | exon | 77518506 | 77519456 | 77518506 | ID=MsG0480022848.01.T01:exon:11088;Parent=MsG0480022848.01.T01 |
| Chr4 | CDS | 77518506 | 77519456 | 77518506 | ID=MsG0480022848.01.T01:cds;Parent=MsG0480022848.01.T01 |
| Gene Sequence |
| Protein sequence |
