AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022905.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022905.01.T01 MTR_5g077540 92.897 535 18 1 1 535 1 515 0.0 1000
MsG0480022905.01.T01 MTR_6g017315 30.677 251 152 7 43 277 67 311 1.72e-25 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022905.01.T01 AT2G44660 69.423 520 141 1 13 532 4 505 0.0 725
MsG0480022905.01.T01 AT5G38460 26.234 385 227 12 43 409 72 417 5.73e-25 108
MsG0480022905.01.T01 AT5G38460 26.234 385 227 12 43 409 72 417 5.73e-25 108

Find 26 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGAATTCTTACAGTTTC+TGG 0.123544 4:+78343402 None:intergenic
AACAGCTCCGGCGAGATTTC+CGG 0.279986 4:+78343434 None:intergenic
GGGTATAGATTGGGGTTTAA+TGG 0.313017 4:-78343507 MsG0480022905.01.T01:exon
GCCGGAGAATCTTCTGAATC+AGG 0.368748 4:-78343528 MsG0480022905.01.T01:exon
TCTGAATCAGGGTATAGATT+GGG 0.397866 4:-78343516 MsG0480022905.01.T01:exon
TTCTGAATCAGGGTATAGAT+TGG 0.448264 4:-78343517 MsG0480022905.01.T01:exon
CCGGCGAGATTTCCGGCGGT+TGG 0.451417 4:+78343441 None:intergenic
TTCTTACAGTTTCTGGAGAC+CGG 0.453479 4:+78343409 None:intergenic
CTCCGATCTAACTTTCGTAT+AGG 0.459878 4:+78343474 None:intergenic
TGGAGACCGGTGAACAGCTC+CGG 0.465955 4:+78343422 None:intergenic
CCCTGATTCAGAAGATTCTC+CGG 0.490689 4:+78343527 None:intergenic
ATCTCGCCGGAGCTGTTCAC+CGG 0.493623 4:-78343428 MsG0480022905.01.T01:exon
TCCATCGCCCTCGCCGTCGC+CGG 0.497946 4:-78343546 MsG0480022905.01.T01:exon
CTGAATCAGGGTATAGATTG+GGG 0.515953 4:-78343515 MsG0480022905.01.T01:exon
TCCGGCGACGGCGAGGGCGA+TGG 0.521228 4:+78343545 None:intergenic
GATCTAACTTTCGTATAGGA+AGG 0.531164 4:+78343478 None:intergenic
AGATTCTCCGGCGACGGCGA+GGG 0.542941 4:+78343539 None:intergenic
ATCTAACTTTCGTATAGGAA+GGG 0.554634 4:+78343479 None:intergenic
TTCAGAAGATTCTCCGGCGA+CGG 0.555740 4:+78343533 None:intergenic
TTCCTATACGAAAGTTAGAT+CGG 0.570716 4:-78343476 MsG0480022905.01.T01:exon
AAGATTCTCCGGCGACGGCG+AGG 0.572155 4:+78343538 None:intergenic
TCTAACTTTCGTATAGGAAG+GGG 0.588085 4:+78343480 None:intergenic
CCGGAGAATCTTCTGAATCA+GGG 0.590156 4:-78343527 MsG0480022905.01.T01:exon
CCAACCGCCGGAAATCTCGC+CGG 0.629122 4:-78343441 MsG0480022905.01.T01:exon
AGCTCCGGCGAGATTTCCGG+CGG 0.633086 4:+78343437 None:intergenic
AGACAACATCAACCAACCGC+CGG 0.645748 4:-78343453 MsG0480022905.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAGTTTAATAGAAAAA+TGG + Chr4:78342380-78342399 None:intergenic 10.0%
!!! AGATTCTTATTTTTATTTTT+GGG - Chr4:78342343-78342362 MsG0480022905.01.T01:exon 10.0%
!!! CAAATTAAATTTTCTATTTA+TGG - Chr4:78343202-78343221 MsG0480022905.01.T01:intron 10.0%
!!! GATCAAATAAATTTTTAATT+AGG + Chr4:78343302-78343321 None:intergenic 10.0%
!!! TAGATTCTTATTTTTATTTT+TGG - Chr4:78342342-78342361 MsG0480022905.01.T01:exon 10.0%
!!! TTTATTTTAATAATTGGTTA+TGG + Chr4:78342289-78342308 None:intergenic 10.0%
!!! TTTTTCTATTAAACTTTTAT+CGG - Chr4:78342380-78342399 MsG0480022905.01.T01:exon 10.0%
!! CATCTTTAACTATATAAAAA+CGG - Chr4:78338743-78338762 MsG0480022904.01.T01:CDS 15.0%
!! CCAATTATTAAAATAAAGTT+TGG - Chr4:78342292-78342311 MsG0480022905.01.T01:intron 15.0%
!! CTTCTTCAAAAAAAAAAAAT+AGG - Chr4:78341443-78341462 MsG0480022905.01.T01:CDS 15.0%
!! GATAATAACTTAAAATTAGT+TGG - Chr4:78342558-78342577 MsG0480022905.01.T01:exon 15.0%
!! GTGAAATATTATGTTATAAT+AGG - Chr4:78341303-78341322 MsG0480022905.01.T01:CDS 15.0%
!! GTGAAATATTATGTTATAAT+TGG - Chr4:78341303-78341322 MsG0480022905.01.T01:CDS 15.0%
!! TCATCATAACAAATATTTAT+CGG + Chr4:78342680-78342699 None:intergenic 15.0%
!!! ACTAATTTTAAGTTATTATC+AGG + Chr4:78342558-78342577 None:intergenic 15.0%
!!! ATATTTCTATTCTTAGAAAA+TGG + Chr4:78340907-78340926 None:intergenic 15.0%
!!! CCAAACTTTATTTTAATAAT+TGG + Chr4:78342295-78342314 None:intergenic 15.0%
!!! TATTTCTATTCTTAGAAAAT+GGG + Chr4:78340906-78340925 None:intergenic 15.0%
!!! TTTATCAATGTTTCTATTTT+TGG + Chr4:78341154-78341173 None:intergenic 15.0%
!!! TTTTACATTTTACACATTTT+TGG - Chr4:78341488-78341507 MsG0480022905.01.T01:intron 15.0%
!! AAAATATGACAGTAAATCTT+TGG + Chr4:78339146-78339165 None:intergenic 20.0%
!! AACAAATAAACAAAATACAC+AGG + Chr4:78339423-78339442 None:intergenic 20.0%
!! AAGTTAATGAGATTTAACTA+TGG + Chr4:78343166-78343185 None:intergenic 20.0%
!! AATAAAACTCAAACTCAAAT+TGG + Chr4:78338672-78338691 None:intergenic 20.0%
!! AATATAAATGTTCAAATGAC+AGG - Chr4:78341228-78341247 MsG0480022905.01.T01:intron 20.0%
!! ATCAACAAAATGAACAAAAA+TGG + Chr4:78339064-78339083 None:intergenic 20.0%
!! ATCACTTTAATAAGATCATA+AGG + Chr4:78342443-78342462 None:intergenic 20.0%
!! ATTCATATCAAGTAATAACT+TGG + Chr4:78343269-78343288 None:intergenic 20.0%
!! GAAGAAAAAGATAACATTAT+AGG + Chr4:78342169-78342188 None:intergenic 20.0%
!! TAAGTATATAACATGTATTG+AGG + Chr4:78338545-78338564 None:intergenic 20.0%
!! TATGTTTGCATAAAATAGTT+AGG + Chr4:78338593-78338612 None:intergenic 20.0%
!! TTGTTAATTGCTAAATAGAA+AGG - Chr4:78340642-78340661 MsG0480022905.01.T01:intron 20.0%
!!! AGTTAAATCTCATTAACTTT+TGG - Chr4:78343167-78343186 MsG0480022905.01.T01:intron 20.0%
!!! CTCATAAGGTTATTTAATTT+AGG + Chr4:78340152-78340171 None:intergenic 20.0%
!!! CTTTAACTTGACAATTTTTA+TGG - Chr4:78342317-78342336 MsG0480022905.01.T01:intron 20.0%
!!! TGTATTTTGTTTATTTGTTG+AGG - Chr4:78339424-78339443 MsG0480022904.01.T01:intron 20.0%
!!! TTAATTTAGGTTTGTTGTTA+TGG + Chr4:78340139-78340158 None:intergenic 20.0%
!!! TTTGAGTTTTATTTTTGTCA+GGG - Chr4:78338679-78338698 MsG0480022905.01.T01:exon 20.0%
! AAAATTCAATCTGTATGACT+TGG + Chr4:78340837-78340856 None:intergenic 25.0%
! AACTACCTTTAGATTCAAAT+TGG + Chr4:78342942-78342961 None:intergenic 25.0%
! AATAAGATCATAAGGAAAGA+TGG + Chr4:78342435-78342454 None:intergenic 25.0%
! AATACAAGAATCTAACAAGA+AGG + Chr4:78340289-78340308 None:intergenic 25.0%
! AATGGGAATAAGAAAGTTTA+GGG + Chr4:78342243-78342262 None:intergenic 25.0%
! ATACAAGAATCTAACAAGAA+GGG + Chr4:78340288-78340307 None:intergenic 25.0%
! ATATAGAACACCCAAAAATT+TGG + Chr4:78340461-78340480 None:intergenic 25.0%
! ATATCAAGTAATAACTTGGT+CGG + Chr4:78343265-78343284 None:intergenic 25.0%
! CAACATTATAGTAGGAATAT+AGG + Chr4:78343389-78343408 None:intergenic 25.0%
! CATTCGTGAAACATTATAAT+TGG - Chr4:78341006-78341025 MsG0480022905.01.T01:intron 25.0%
! CTATAGCTAGACATATAATT+AGG - Chr4:78343358-78343377 MsG0480022905.01.T01:intron 25.0%
! CTATATTCCTACTATAATGT+TGG - Chr4:78343387-78343406 MsG0480022905.01.T01:intron 25.0%
! CTTTAAACATTTATTTGCAG+TGG - Chr4:78339392-78339411 MsG0480022904.01.T01:intron 25.0%
! TAGTGCAAGAATTTAGAAAT+GGG + Chr4:78339626-78339645 None:intergenic 25.0%
! TATAGAACACCCAAAAATTT+GGG + Chr4:78340460-78340479 None:intergenic 25.0%
! TCAAGCATAATAAACGATTA+AGG - Chr4:78342623-78342642 MsG0480022905.01.T01:exon 25.0%
! TCCTATTTATACTTGAAATC+AGG + Chr4:78339930-78339949 None:intergenic 25.0%
! TTAGTGCAAGAATTTAGAAA+TGG + Chr4:78339627-78339646 None:intergenic 25.0%
! TTATAGACTTACTAGGAATT+TGG - Chr4:78339191-78339210 MsG0480022904.01.T01:intron 25.0%
! TTTGAATTATAGCTCGAATA+CGG - Chr4:78339110-78339129 MsG0480022904.01.T01:intron 25.0%
!! AATACAATGGATTTCTCATT+GGG - Chr4:78339292-78339311 MsG0480022904.01.T01:intron 25.0%
!! ACCTGATTTCAAGTATAAAT+AGG - Chr4:78339926-78339945 MsG0480022904.01.T01:CDS 25.0%
!! ATTCTATTCTTTTGCAAGAA+GGG + Chr4:78340714-78340733 None:intergenic 25.0%
!! CTTTTACATATTCCAATCAA+TGG - Chr4:78338565-78338584 MsG0480022905.01.T01:exon 25.0%
!! TATTCTATTCTTTTGCAAGA+AGG + Chr4:78340715-78340734 None:intergenic 25.0%
!! TGAAAAGTATAATTGCTTCT+TGG + Chr4:78342653-78342672 None:intergenic 25.0%
!! TGTCATGCAATAATTTTATC+TGG + Chr4:78340183-78340202 None:intergenic 25.0%
!!! AGGAATAATGGTTTTGTTAT+TGG - Chr4:78342976-78342995 MsG0480022905.01.T01:exon 25.0%
!!! ATTAACTTTTGGTTTGTTTG+TGG - Chr4:78343178-78343197 MsG0480022905.01.T01:intron 25.0%
!!! CATTACTTTTTGTTGTCAAT+AGG - Chr4:78342110-78342129 MsG0480022905.01.T01:intron 25.0%
!!! GTTTGAGTTTTATTTTTGTC+AGG - Chr4:78338678-78338697 MsG0480022905.01.T01:exon 25.0%
AAAGATGAGTTAACCCAATT+TGG + Chr4:78338730-78338749 None:intergenic 30.0%
AACGTCAATTGAAAAGATCT+CGG + Chr4:78341764-78341783 None:intergenic 30.0%
AATAGTTAGGAACCATTGAT+TGG + Chr4:78338580-78338599 None:intergenic 30.0%
AATCCCTATGTGAAATGATA+TGG - Chr4:78339796-78339815 MsG0480022904.01.T01:CDS 30.0%
AGTAATGCCAACATTATAGT+AGG + Chr4:78343397-78343416 None:intergenic 30.0%
AGTATACAGAGATCAACATA+AGG + Chr4:78343101-78343120 None:intergenic 30.0%
AGTGCAAGAATTTAGAAATG+GGG + Chr4:78339625-78339644 None:intergenic 30.0%
ATAGAACACCCAAAAATTTG+GGG + Chr4:78340459-78340478 None:intergenic 30.0%
ATCGGATGATTCTTATTACT+TGG - Chr4:78342398-78342417 MsG0480022905.01.T01:exon 30.0%
ATCTAAAGGTAGTTTAAGTG+CGG - Chr4:78342948-78342967 MsG0480022905.01.T01:exon 30.0%
ATCTAACTTTCGTATAGGAA+GGG + Chr4:78338382-78338401 None:intergenic 30.0%
ATCTGGATACATAACTCATA+AGG + Chr4:78340166-78340185 None:intergenic 30.0%
ATGATGAGTGAGAATGTTTA+TGG - Chr4:78342693-78342712 MsG0480022905.01.T01:exon 30.0%
ATTAAAGTGATCTTCACACA+AGG - Chr4:78342452-78342471 MsG0480022905.01.T01:exon 30.0%
ATTGAGAAGATATATCTGGT+TGG - Chr4:78343003-78343022 MsG0480022905.01.T01:exon 30.0%
CAAACTACTCATTATGTGTT+TGG + Chr4:78343504-78343523 None:intergenic 30.0%
CAATGAGAAATCCATTGTAT+TGG + Chr4:78339293-78339312 None:intergenic 30.0%
CAATGGGAATAAGAAAGTTT+AGG + Chr4:78342244-78342263 None:intergenic 30.0%
CAGAACCATTATAAATGTCA+CGG + Chr4:78341907-78341926 None:intergenic 30.0%
CCAAAAAAATCAATTATGCG+AGG + Chr4:78340352-78340371 None:intergenic 30.0%
CGAAGATATGAAAGTTGTTT+GGG - Chr4:78340081-78340100 MsG0480022905.01.T01:intron 30.0%
CTACCATATCATTTCACATA+GGG + Chr4:78339802-78339821 None:intergenic 30.0%
CTTGATTGAGAAGATATATC+TGG - Chr4:78342999-78343018 MsG0480022905.01.T01:exon 30.0%
GAAGATATGAAAGTTGTTTG+GGG - Chr4:78340082-78340101 MsG0480022905.01.T01:intron 30.0%
GATATGGTAGATGAATGTTA+AGG - Chr4:78339812-78339831 MsG0480022904.01.T01:CDS 30.0%
GTATAATTCCATAGAACTTG+AGG + Chr4:78343339-78343358 None:intergenic 30.0%
GTATACAGAGATCAACATAA+GGG + Chr4:78343100-78343119 None:intergenic 30.0%
TACTATAATGTTGGCATTAC+TGG - Chr4:78343396-78343415 MsG0480022905.01.T01:intron 30.0%
TATAACATCTCGATCTTGTT+GGG + Chr4:78341208-78341227 None:intergenic 30.0%
TATACAGAGATCAACATAAG+GGG + Chr4:78343099-78343118 None:intergenic 30.0%
TATTCTTAGAAAATGGGATG+AGG + Chr4:78340900-78340919 None:intergenic 30.0%
TCGAAGATATGAAAGTTGTT+TGG - Chr4:78340080-78340099 MsG0480022905.01.T01:intron 30.0%
TCGTGAAACATTATAATTGG+TGG - Chr4:78341009-78341028 MsG0480022905.01.T01:intron 30.0%
TCTACCATATCATTTCACAT+AGG + Chr4:78339803-78339822 None:intergenic 30.0%
TCTTGTAGTTGTAGAGATAT+GGG - Chr4:78343026-78343045 MsG0480022905.01.T01:exon 30.0%
TTAAAGTGATCTTCACACAA+GGG - Chr4:78342453-78342472 MsG0480022905.01.T01:exon 30.0%
TTATAACATCTCGATCTTGT+TGG + Chr4:78341209-78341228 None:intergenic 30.0%
TTCCTATACGAAAGTTAGAT+CGG - Chr4:78338382-78338401 MsG0480022905.01.T01:exon 30.0%
TTCTATATCATGTCAGACAA+AGG - Chr4:78340473-78340492 MsG0480022905.01.T01:intron 30.0%
TTTATACTTGAAATCAGGTC+AGG + Chr4:78339925-78339944 None:intergenic 30.0%
! AAAATTCTGAAGGACCAAAT+TGG - Chr4:78338713-78338732 MsG0480022904.01.T01:CDS 30.0%
! AAAGGAAAAAAAAGCACACA+AGG - Chr4:78340660-78340679 MsG0480022905.01.T01:intron 30.0%
! AAATTCTGAAGGACCAAATT+GGG - Chr4:78338714-78338733 MsG0480022904.01.T01:CDS 30.0%
! AAGGAAAAAAAAGCACACAA+GGG - Chr4:78340661-78340680 MsG0480022905.01.T01:intron 30.0%
! ATACCTGTGGTTTTCTTTTT+GGG - Chr4:78342006-78342025 MsG0480022905.01.T01:intron 30.0%
! CAATACAATGGATTTCTCAT+TGG - Chr4:78339291-78339310 MsG0480022904.01.T01:intron 30.0%
! CTGATTTGTCTCTTCTTTAT+GGG - Chr4:78339166-78339185 MsG0480022904.01.T01:intron 30.0%
! CTTCCTGAAAAAAGTTTTAC+AGG - Chr4:78339658-78339677 MsG0480022904.01.T01:intron 30.0%
! GAAAAGGAGAACTTTTATAC+AGG + Chr4:78338893-78338912 None:intergenic 30.0%
! GTTGATTTCACTTTCGTATT+TGG - Chr4:78339320-78339339 MsG0480022904.01.T01:intron 30.0%
! TAGTTACTGAGCTTGATTTT+TGG - Chr4:78341115-78341134 MsG0480022905.01.T01:intron 30.0%
! TATACCTGTGGTTTTCTTTT+TGG - Chr4:78342005-78342024 MsG0480022905.01.T01:intron 30.0%
! TCTGATTTGTCTCTTCTTTA+TGG - Chr4:78339165-78339184 MsG0480022904.01.T01:intron 30.0%
! TGATTTGTCTCTTCTTTATG+GGG - Chr4:78339167-78339186 MsG0480022904.01.T01:intron 30.0%
! TTCTATTCTTTTGCAAGAAG+GGG + Chr4:78340713-78340732 None:intergenic 30.0%
! TTTAGTCGACTCTTGATTAT+GGG - Chr4:78339477-78339496 MsG0480022904.01.T01:intron 30.0%
!! AGCAACAACAGAATTTTGAT+AGG + Chr4:78342823-78342842 None:intergenic 30.0%
!! TCTTCGAACATTTATTTCTG+TGG + Chr4:78340067-78340086 None:intergenic 30.0%
!!! ACTCCTGTAAAACTTTTTTC+AGG + Chr4:78339664-78339683 None:intergenic 30.0%
!!! CATATTTTGATGTTGAACTG+TGG + Chr4:78340985-78341004 None:intergenic 30.0%
!!! CCTCGCATAATTGATTTTTT+TGG - Chr4:78340349-78340368 MsG0480022905.01.T01:intron 30.0%
!!! TATTTTGAGTTACCAACTCT+CGG + Chr4:78340961-78340980 None:intergenic 30.0%
AAACAAGGGAGAAAATGGTA+TGG + Chr4:78339707-78339726 None:intergenic 35.0%
AAATACACAACATTCCAGCA+TGG - Chr4:78338786-78338805 MsG0480022904.01.T01:CDS 35.0%
AATACACAACATTCCAGCAT+GGG - Chr4:78338787-78338806 MsG0480022904.01.T01:CDS 35.0%
ACCATTATAAATGTCACGGA+TGG + Chr4:78341903-78341922 None:intergenic 35.0%
AGTTACATCATGACACTCTA+TGG - Chr4:78339842-78339861 MsG0480022904.01.T01:CDS 35.0%
ATAACATCTCGATCTTGTTG+GGG + Chr4:78341207-78341226 None:intergenic 35.0%
ATAAGTTTGAATCCTTCTGC+TGG - Chr4:78343451-78343470 MsG0480022905.01.T01:exon 35.0%
ATATCATATGCGTATACCTG+TGG - Chr4:78341993-78342012 MsG0480022905.01.T01:intron 35.0%
ATCACTTCTTAACATAAGCC+TGG + Chr4:78341280-78341299 None:intergenic 35.0%
ATCCAACGATTGTTTCCATT+TGG - Chr4:78340407-78340426 MsG0480022905.01.T01:intron 35.0%
ATCCATCTAGTAATCCTTTG+TGG + Chr4:78341975-78341994 None:intergenic 35.0%
ATGGGGTTTATAGACTTACT+AGG - Chr4:78339184-78339203 MsG0480022904.01.T01:intron 35.0%
CATGTGCATTTCCAATACAA+TGG - Chr4:78339279-78339298 MsG0480022904.01.T01:intron 35.0%
CATTGTATTGGAAATGCACA+TGG + Chr4:78339281-78339300 None:intergenic 35.0%
CGTTCGAAATATGCAAAGAA+CGG + Chr4:78339033-78339052 None:intergenic 35.0%
CTTGAAAAGACAAGGAGATA+AGG + Chr4:78341934-78341953 None:intergenic 35.0%
CTTGTAGTTGTAGAGATATG+GGG - Chr4:78343027-78343046 MsG0480022905.01.T01:exon 35.0%
GAAGGAATTCTTACAGTTTC+TGG + Chr4:78338459-78338478 None:intergenic 35.0%
GACGTCAATTGAATAGATCT+CGG + Chr4:78341530-78341549 None:intergenic 35.0%
GATCTAACTTTCGTATAGGA+AGG + Chr4:78338383-78338402 None:intergenic 35.0%
GATTTCACTTTCGTATTTGG+AGG - Chr4:78339323-78339342 MsG0480022904.01.T01:intron 35.0%
GCAGATCAAATTCACACAAA+AGG + Chr4:78343553-78343572 None:intergenic 35.0%
GGGGAAACAACATCAAATAT+GGG + Chr4:78339605-78339624 None:intergenic 35.0%
GTCTTGTAGTTGTAGAGATA+TGG - Chr4:78343025-78343044 MsG0480022905.01.T01:exon 35.0%
GTGCAAGAATTTAGAAATGG+GGG + Chr4:78339624-78339643 None:intergenic 35.0%
GTTACATCATGACACTCTAT+GGG - Chr4:78339843-78339862 MsG0480022904.01.T01:CDS 35.0%
TAAGTTTGAATCCTTCTGCT+GGG - Chr4:78343452-78343471 MsG0480022905.01.T01:exon 35.0%
TAGTGGAAAAAGAGAATAGC+AGG + Chr4:78342779-78342798 None:intergenic 35.0%
TATAATTCAAACCCTCCTGA+AGG + Chr4:78339101-78339120 None:intergenic 35.0%
TCATATTTACCTGTCCAAGA+TGG + Chr4:78339548-78339567 None:intergenic 35.0%
TCCATCCGTGACATTTATAA+TGG - Chr4:78341899-78341918 MsG0480022905.01.T01:intron 35.0%
TCTAACTTTCGTATAGGAAG+GGG + Chr4:78338381-78338400 None:intergenic 35.0%
TCTGAATCAGGGTATAGATT+GGG - Chr4:78338342-78338361 MsG0480022905.01.T01:exon 35.0%
TGTAATGTCTGAGTTTGAGT+TGG - Chr4:78342517-78342536 MsG0480022905.01.T01:exon 35.0%
TTCTGAATCAGGGTATAGAT+TGG - Chr4:78338341-78338360 MsG0480022905.01.T01:exon 35.0%
! AAAGCAGAGGGTGTAAAAAT+TGG + Chr4:78343053-78343072 None:intergenic 35.0%
! AAGTAATGTTTTGCATCCTC+CGG + Chr4:78342098-78342117 None:intergenic 35.0%
! AAGTTCAGCAGTTTTCACTA+AGG - Chr4:78339997-78340016 MsG0480022905.01.T01:intron 35.0%
! AGAACTTGGTAGCTCAAAAT+GGG - Chr4:78341252-78341271 MsG0480022905.01.T01:intron 35.0%
! ATTGGTCTGACATTTCGATA+CGG + Chr4:78338654-78338673 None:intergenic 35.0%
! ATTTGTTGAGGCACTATTGT+TGG - Chr4:78339436-78339455 MsG0480022904.01.T01:intron 35.0%
! ATTTTTACACCCTCTGCTTT+TGG - Chr4:78343053-78343072 MsG0480022905.01.T01:exon 35.0%
! CGAGAAAGCAAAAGTTGATT+TGG - Chr4:78339217-78339236 MsG0480022904.01.T01:intron 35.0%
! CTTATCTCCTTGTCTTTTCA+AGG - Chr4:78341932-78341951 MsG0480022905.01.T01:intron 35.0%
! CTTTAGTCGACTCTTGATTA+TGG - Chr4:78339476-78339495 MsG0480022904.01.T01:intron 35.0%
! GCGTGCTTTTCATTAGTATT+AGG - Chr4:78340759-78340778 MsG0480022905.01.T01:intron 35.0%
! GCTTTTTGTCATTCAAGTAC+AGG - Chr4:78341601-78341620 MsG0480022905.01.T01:intron 35.0%
! GTATTGATGTCTTGTGAAGA+GGG - Chr4:78342475-78342494 MsG0480022905.01.T01:exon 35.0%
! TAAACCCAAGTTTTCTGAGT+AGG + Chr4:78340508-78340527 None:intergenic 35.0%
! TCTTTTTCCACTACTCTTTG+AGG - Chr4:78342786-78342805 MsG0480022905.01.T01:exon 35.0%
! TGAAAAGCACGCAGTAAATA+AGG + Chr4:78340751-78340770 None:intergenic 35.0%
! TGGTCCACTATTAAAAGCAT+CGG + Chr4:78339261-78339280 None:intergenic 35.0%
! TTTGTTGAGGCACTATTGTT+GGG - Chr4:78339437-78339456 MsG0480022904.01.T01:intron 35.0%
!! TGATTTGGTCGTTGGTTATT+TGG - Chr4:78339232-78339251 MsG0480022904.01.T01:intron 35.0%
!! TTCTTCACTCCATTTTGATG+TGG - Chr4:78342842-78342861 MsG0480022905.01.T01:exon 35.0%
!! TTTTTACACCCTCTGCTTTT+GGG - Chr4:78343054-78343073 MsG0480022905.01.T01:exon 35.0%
AAAATAGTGCACCTTCAGGA+GGG - Chr4:78339087-78339106 MsG0480022904.01.T01:CDS 40.0%
AAAGCCAGACCACATCAAAA+TGG + Chr4:78342854-78342873 None:intergenic 40.0%
AACGATTGTTTCCATTTGGC+AGG - Chr4:78340411-78340430 MsG0480022905.01.T01:intron 40.0%
AAGGTCTCTTGTGAATGTGT+GGG - Chr4:78340016-78340035 MsG0480022905.01.T01:intron 40.0%
AAGTCTGTACTACGGTAAGA+CGG + Chr4:78338916-78338935 None:intergenic 40.0%
AATTCCATAGAACTTGAGGC+AGG + Chr4:78343335-78343354 None:intergenic 40.0%
ACCCGATATCCACAAAACAA+GGG + Chr4:78339721-78339740 None:intergenic 40.0%
ACCTGTCCAAGATGGAAAAA+CGG + Chr4:78339540-78339559 None:intergenic 40.0%
ACGATTGTTTCCATTTGGCA+GGG - Chr4:78340412-78340431 MsG0480022905.01.T01:intron 40.0%
AGGCGAGTGGAATTACAAAA+TGG + Chr4:78342058-78342077 None:intergenic 40.0%
AGGTAGTAGAAAACCCACTT+GGG - Chr4:78341323-78341342 MsG0480022905.01.T01:CDS 40.0%
ATCTCTGTATACTGTGCTCT+GGG - Chr4:78343108-78343127 MsG0480022905.01.T01:exon 40.0%
ATGTTGGCATTACTGGCAAA+AGG - Chr4:78343403-78343422 MsG0480022905.01.T01:intron 40.0%
ATTCAAGTACAGGCAGAACT+TGG - Chr4:78341611-78341630 MsG0480022905.01.T01:intron 40.0%
ATTCCATAGAACTTGAGGCA+GGG + Chr4:78343334-78343353 None:intergenic 40.0%
CAAAGTCGGTAGTTGACAAT+TGG + Chr4:78340235-78340254 None:intergenic 40.0%
CAATTGAACAGCAACATCTC+AGG + Chr4:78341091-78341110 None:intergenic 40.0%
CATGACACTCTATGGGAATA+AGG - Chr4:78339850-78339869 MsG0480022904.01.T01:CDS 40.0%
CATTAACCAGTCATCAAGCT+CGG + Chr4:78341558-78341577 None:intergenic 40.0%
CCACAAAACAAGGGAGAAAA+TGG + Chr4:78339712-78339731 None:intergenic 40.0%
CCTTCCTACTCAGAAAACTT+GGG - Chr4:78340501-78340520 MsG0480022905.01.T01:intron 40.0%
CGCTACAGAAGAAAATGTGA+AGG + Chr4:78338477-78338496 None:intergenic 40.0%
CTCCGATCTAACTTTCGTAT+AGG + Chr4:78338387-78338406 None:intergenic 40.0%
CTGAATCAGGGTATAGATTG+GGG - Chr4:78338343-78338362 MsG0480022905.01.T01:exon 40.0%
GAATTATAGCTCGAATACGG+CGG - Chr4:78339113-78339132 MsG0480022904.01.T01:intron 40.0%
GCTCACACAAAGAAAAAAGC+TGG - Chr4:78342916-78342935 MsG0480022905.01.T01:exon 40.0%
GCTGGCCAATTTGAATCTAA+AGG - Chr4:78342934-78342953 MsG0480022905.01.T01:exon 40.0%
GGATCATGTACTCTTGGATA+TGG - Chr4:78343130-78343149 MsG0480022905.01.T01:exon 40.0%
GGGGGAAACAACATCAAATA+TGG + Chr4:78339606-78339625 None:intergenic 40.0%
GGGTATAGATTGGGGTTTAA+TGG - Chr4:78338351-78338370 MsG0480022905.01.T01:exon 40.0%
GTGTGAATTTGATCTGCTGA+CGG - Chr4:78343556-78343575 MsG0480022905.01.T01:exon 40.0%
TAAAATAGTGCACCTTCAGG+AGG - Chr4:78339086-78339105 MsG0480022904.01.T01:CDS 40.0%
TAAGGTCTCTTGTGAATGTG+TGG - Chr4:78340015-78340034 MsG0480022905.01.T01:intron 40.0%
TACCCGATATCCACAAAACA+AGG + Chr4:78339722-78339741 None:intergenic 40.0%
TAGGTAGTAGAAAACCCACT+TGG - Chr4:78341322-78341341 MsG0480022905.01.T01:CDS 40.0%
TCACTTTCGTATTTGGAGGA+AGG - Chr4:78339327-78339346 MsG0480022904.01.T01:intron 40.0%
TCCTAAAATAGTGCACCTTC+AGG - Chr4:78339083-78339102 MsG0480022904.01.T01:CDS 40.0%
TCGAAATATGCAAAGAACGG+CGG + Chr4:78339030-78339049 None:intergenic 40.0%
TGAAAACTGCTGAACTTGCA+GGG + Chr4:78339994-78340013 None:intergenic 40.0%
TGCCAAATGGAAACAATCGT+TGG + Chr4:78340412-78340431 None:intergenic 40.0%
TGTTGGCATTACTGGCAAAA+GGG - Chr4:78343404-78343423 MsG0480022905.01.T01:intron 40.0%
TGTTGGGGTGGAATTGTAAA+AGG - Chr4:78339453-78339472 MsG0480022904.01.T01:intron 40.0%
TTACCGTAGTACAGACTTTG+AGG - Chr4:78338918-78338937 MsG0480022904.01.T01:CDS 40.0%
TTCAAATGACAGGCAGAACT+TGG - Chr4:78341238-78341257 MsG0480022905.01.T01:intron 40.0%
TTCCAAGCCTTGAAAAGACA+AGG + Chr4:78341942-78341961 None:intergenic 40.0%
TTCGTATTTGGAGGAAGGAA+GGG - Chr4:78339332-78339351 MsG0480022904.01.T01:intron 40.0%
TTTCGTATTTGGAGGAAGGA+AGG - Chr4:78339331-78339350 MsG0480022904.01.T01:intron 40.0%
TTTGTGGATATCGGGTATGT+CGG - Chr4:78339725-78339744 MsG0480022904.01.T01:intron 40.0%
! AGTAATGTTTTGCATCCTCC+GGG + Chr4:78342097-78342116 None:intergenic 40.0%
! ATACTGGGCCCCAAATTTTT+GGG - Chr4:78340448-78340467 MsG0480022905.01.T01:intron 40.0%
! ATTCTCACCGGTGTCAATTT+AGG - Chr4:78341407-78341426 MsG0480022905.01.T01:CDS 40.0%
! CAGAACTTGGTAGCTCAAAA+TGG - Chr4:78341251-78341270 MsG0480022905.01.T01:intron 40.0%
! GTCACCGATGCTTTTAATAG+TGG - Chr4:78339254-78339273 MsG0480022904.01.T01:intron 40.0%
! TAGTTTCTCTTTTCCCATGC+TGG + Chr4:78338803-78338822 None:intergenic 40.0%
! TCAAAGTACCACTGTGAAAG+AGG + Chr4:78338979-78338998 None:intergenic 40.0%
! TCTACCTCGGGTAAGTTTTA+CGG - Chr4:78340592-78340611 MsG0480022905.01.T01:intron 40.0%
! TTCAGCACAGTTTTACGACA+GGG - Chr4:78342873-78342892 MsG0480022905.01.T01:exon 40.0%
! TTCTTACAGTTTCTGGAGAC+CGG + Chr4:78338452-78338471 None:intergenic 40.0%
! TTGTTGAGGCACTATTGTTG+GGG - Chr4:78339438-78339457 MsG0480022904.01.T01:intron 40.0%
! TTTCAGCACAGTTTTACGAC+AGG - Chr4:78342872-78342891 MsG0480022905.01.T01:exon 40.0%
!! CAATCTGTATGACTTGGTCA+TGG + Chr4:78340831-78340850 None:intergenic 40.0%
!! GCAAAAGTTGATTTGGTCGT+TGG - Chr4:78339224-78339243 MsG0480022904.01.T01:intron 40.0%
!! GGTATTGATGTCTTGTGAAG+AGG - Chr4:78342474-78342493 MsG0480022905.01.T01:exon 40.0%
!! TCCTGAAGGTGCACTATTTT+AGG + Chr4:78339087-78339106 None:intergenic 40.0%
!!! CCATTTTCTCCCTTGTTTTG+TGG - Chr4:78339709-78339728 MsG0480022904.01.T01:intron 40.0%
!!! CTCCCTTGTTTTGTGGATAT+CGG - Chr4:78339716-78339735 MsG0480022904.01.T01:intron 40.0%
!!! TCCCTTGTTTTGTGGATATC+GGG - Chr4:78339717-78339736 MsG0480022904.01.T01:intron 40.0%
ACCCGAGGTAGAACACTAAA+AGG + Chr4:78340584-78340603 None:intergenic 45.0%
AGCTTATCACCCAAAAGCAG+AGG + Chr4:78343066-78343085 None:intergenic 45.0%
AGGTAGAACACTAAAAGGGG+AGG + Chr4:78340579-78340598 None:intergenic 45.0%
AGTACCACTGTGAAAGAGGA+AGG + Chr4:78338975-78338994 None:intergenic 45.0%
AGTAGAAAACCCACTTGGGT+TGG - Chr4:78341327-78341346 MsG0480022905.01.T01:CDS 45.0%
AGTCTGTACTACGGTAAGAC+GGG + Chr4:78338915-78338934 None:intergenic 45.0%
AGTGCGGATGTGAGGAATAA+TGG - Chr4:78342964-78342983 MsG0480022905.01.T01:exon 45.0%
ATCTTGCTCATCAGAGCATG+TGG + Chr4:78339761-78339780 None:intergenic 45.0%
ATGACCGTAAAACTTACCCG+AGG + Chr4:78340599-78340618 None:intergenic 45.0%
ATGGAAAAACGGCCCAAATG+CGG + Chr4:78339529-78339548 None:intergenic 45.0%
ATTCCCTTCCTCTTTCACAG+TGG - Chr4:78338968-78338987 MsG0480022904.01.T01:CDS 45.0%
CAGTGTTTGCATCCGCATTT+GGG - Chr4:78339514-78339533 MsG0480022904.01.T01:intron 45.0%
CCACCCAAAAAGAAAACCAC+AGG + Chr4:78342012-78342031 None:intergenic 45.0%
CCCGAGGTAGAACACTAAAA+GGG + Chr4:78340583-78340602 None:intergenic 45.0%
CCCTGATTCAGAAGATTCTC+CGG + Chr4:78338334-78338353 None:intergenic 45.0%
CCGAGGTAGAACACTAAAAG+GGG + Chr4:78340582-78340601 None:intergenic 45.0%
CCGGAGAATCTTCTGAATCA+GGG - Chr4:78338331-78338350 MsG0480022905.01.T01:exon 45.0%
CGAAATATGCAAAGAACGGC+GGG + Chr4:78339029-78339048 None:intergenic 45.0%
CGATTGTTTCCATTTGGCAG+GGG - Chr4:78340413-78340432 MsG0480022905.01.T01:intron 45.0%
CGTGCTGGAGAAAATTCTGA+AGG - Chr4:78338703-78338722 MsG0480022904.01.T01:CDS 45.0%
GATCTCTGTATACTGTGCTC+TGG - Chr4:78343107-78343126 MsG0480022905.01.T01:exon 45.0%
GATTGTTTCCATTTGGCAGG+GGG - Chr4:78340414-78340433 MsG0480022905.01.T01:intron 45.0%
GCACCTCAAAGTCTGTACTA+CGG + Chr4:78338924-78338943 None:intergenic 45.0%
GCCTTCCTACTCAGAAAACT+TGG - Chr4:78340500-78340519 MsG0480022905.01.T01:intron 45.0%
GCTTATCACCCAAAAGCAGA+GGG + Chr4:78343065-78343084 None:intergenic 45.0%
GGCCACAAAGGATTACTAGA+TGG - Chr4:78341970-78341989 MsG0480022905.01.T01:intron 45.0%
GTACCACTGTGAAAGAGGAA+GGG + Chr4:78338974-78338993 None:intergenic 45.0%
GTAGTTTAAGTGCGGATGTG+AGG - Chr4:78342956-78342975 MsG0480022905.01.T01:exon 45.0%
GTGAAAACTGCTGAACTTGC+AGG + Chr4:78339995-78340014 None:intergenic 45.0%
GTTGGCATTACTGGCAAAAG+GGG - Chr4:78343405-78343424 MsG0480022905.01.T01:intron 45.0%
TACTACGGTAAGACGGGAAA+AGG + Chr4:78338909-78338928 None:intergenic 45.0%
TAGCGCACCTAAATTGACAC+CGG + Chr4:78341417-78341436 None:intergenic 45.0%
TCAAGGCTTGGAAGAATCCA+CGG - Chr4:78341949-78341968 MsG0480022905.01.T01:intron 45.0%
TCTCTGTATACTGTGCTCTG+GGG - Chr4:78343109-78343128 MsG0480022905.01.T01:exon 45.0%
TCTTGTGCCTCAAAGAGTAG+TGG + Chr4:78342796-78342815 None:intergenic 45.0%
TTCCATAGAACTTGAGGCAG+GGG + Chr4:78343333-78343352 None:intergenic 45.0%
! AGTCGACTCTTGATTATGGG+AGG - Chr4:78339480-78339499 MsG0480022904.01.T01:intron 45.0%
! CATACTGGGCCCCAAATTTT+TGG - Chr4:78340447-78340466 MsG0480022905.01.T01:intron 45.0%
! CCCAAGTTTTCTGAGTAGGA+AGG + Chr4:78340504-78340523 None:intergenic 45.0%
! CCCCTTTTAGTGTTCTACCT+CGG - Chr4:78340579-78340598 MsG0480022905.01.T01:intron 45.0%
! CCCTTTTAGTGTTCTACCTC+GGG - Chr4:78340580-78340599 MsG0480022905.01.T01:intron 45.0%
! GAGGAAGGAAGGGATTTGTT+AGG - Chr4:78339342-78339361 MsG0480022904.01.T01:intron 45.0%
! GTAATGTTTTGCATCCTCCG+GGG + Chr4:78342096-78342115 None:intergenic 45.0%
! TCGCAACTGAGCTTGATAAC+TGG - Chr4:78341783-78341802 MsG0480022905.01.T01:intron 45.0%
!! AACCACCAGAGAGTCGTTTT+CGG + Chr4:78338856-78338875 None:intergenic 45.0%
!! CACTCCATTTTGATGTGGTC+TGG - Chr4:78342847-78342866 MsG0480022905.01.T01:exon 45.0%
!! CCTGTGGTTTTCTTTTTGGG+TGG - Chr4:78342009-78342028 MsG0480022905.01.T01:intron 45.0%
!! CTCCTTGTCTTTTCAAGGCT+TGG - Chr4:78341937-78341956 MsG0480022905.01.T01:intron 45.0%
!! GAAGGAAGGGATTTGTTAGG+TGG - Chr4:78339345-78339364 MsG0480022904.01.T01:intron 45.0%
!! TATTTTTGTCAGGGACGTGC+TGG - Chr4:78338688-78338707 MsG0480022905.01.T01:exon 45.0%
!!! TTTGGGCCGTTTTTCCATCT+TGG - Chr4:78339531-78339550 MsG0480022904.01.T01:intron 45.0%
AGAATTGCTGACCCAGCAGA+AGG + Chr4:78343466-78343485 None:intergenic 50.0%
AGACAACATCAACCAACCGC+CGG - Chr4:78338405-78338424 MsG0480022905.01.T01:exon 50.0%
ATCTCGGAAGTCACAACAGC+TGG + Chr4:78341748-78341767 None:intergenic 50.0%
ATCTCGGAAGTTGCAACAGC+TGG + Chr4:78341514-78341533 None:intergenic 50.0%
CAGCAGCTTCATTCACTGCA+GGG - Chr4:78340540-78340559 MsG0480022905.01.T01:intron 50.0%
CGCACATGAGCATGCAAAGT+CGG + Chr4:78340249-78340268 None:intergenic 50.0%
CTAGTAATCCTTTGTGGCCG+TGG + Chr4:78341969-78341988 None:intergenic 50.0%
CTTTGTTGCAGCACAAACCC+CGG - Chr4:78342076-78342095 MsG0480022905.01.T01:intron 50.0%
GCAGTGTTTGCATCCGCATT+TGG - Chr4:78339513-78339532 MsG0480022904.01.T01:intron 50.0%
GCCGGAGAATCTTCTGAATC+AGG - Chr4:78338330-78338349 MsG0480022905.01.T01:exon 50.0%
GCTGGGTCAGCAATTCTGTA+TGG - Chr4:78343469-78343488 MsG0480022905.01.T01:exon 50.0%
GGTAGCTCAAAATGAGCACC+AGG - Chr4:78341632-78341651 MsG0480022905.01.T01:intron 50.0%
GGTCTGACATTTCGATACGG+AGG + Chr4:78338651-78338670 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCAC+CGG - Chr4:78341395-78341414 MsG0480022905.01.T01:CDS 50.0%
GTGTCAATGCCAGCCAATTG+CGG + Chr4:78338948-78338967 None:intergenic 50.0%
TGAATGAAGCTGCTGGTGTC+TGG + Chr4:78340535-78340554 None:intergenic 50.0%
TTCAGAAGATTCTCCGGCGA+CGG + Chr4:78338328-78338347 None:intergenic 50.0%
TTGCTCATCAGAGCATGTGG+AGG + Chr4:78339758-78339777 None:intergenic 50.0%
! AATTTGGGGCCCAGTATGCA+TGG + Chr4:78340445-78340464 None:intergenic 50.0%
! CAACATCTCAGGCGTTGCAA+TGG + Chr4:78341080-78341099 None:intergenic 50.0%
! CTCTGGGGATCATGTACTCT+TGG - Chr4:78343124-78343143 MsG0480022905.01.T01:exon 50.0%
! GTAATCTAGAGTCCACGGAC+TGG + Chr4:78339007-78339026 None:intergenic 50.0%
! TCATTCACTGCAGGGCTAGT+AGG - Chr4:78340548-78340567 MsG0480022905.01.T01:intron 50.0%
! TTGAGGCACTATTGTTGGGG+TGG - Chr4:78339441-78339460 MsG0480022904.01.T01:intron 50.0%
!! ACCACCAGAGAGTCGTTTTC+GGG + Chr4:78338855-78338874 None:intergenic 50.0%
!! ACTTTGAGGTGCACCGCAAT+TGG - Chr4:78338932-78338951 MsG0480022904.01.T01:CDS 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - Chr4:78341347-78341366 MsG0480022905.01.T01:CDS 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG - Chr4:78341346-78341365 MsG0480022905.01.T01:CDS 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG - Chr4:78341341-78341360 MsG0480022905.01.T01:CDS 50.0%
!!! GCCGTTTTTCCATCTTGGAC+AGG - Chr4:78339536-78339555 MsG0480022904.01.T01:intron 50.0%
AACAGCTCCGGCGAGATTTC+CGG + Chr4:78338427-78338446 None:intergenic 55.0%
ACCACTAGGCCAACCCAAGT+GGG + Chr4:78341339-78341358 None:intergenic 55.0%
ACTTTGACGAGACCAGTCCG+TGG - Chr4:78338992-78339011 MsG0480022904.01.T01:CDS 55.0%
CCAGCAGCTTCATTCACTGC+AGG - Chr4:78340539-78340558 MsG0480022905.01.T01:intron 55.0%
CCTGCAGTGAATGAAGCTGC+TGG + Chr4:78340542-78340561 None:intergenic 55.0%
CGGGGTTTGTGCTGCAACAA+AGG + Chr4:78342078-78342097 None:intergenic 55.0%
GAATCGAACCTGAGACCTCG+AGG + Chr4:78341391-78341410 None:intergenic 55.0%
GGAAGAATCCACGGCCACAA+AGG - Chr4:78341958-78341977 MsG0480022905.01.T01:intron 55.0%
GGGGCTTTGCCATGCATACT+GGG - Chr4:78340433-78340452 MsG0480022905.01.T01:intron 55.0%
GGTAGCTCAAAATGGGCACC+AGG - Chr4:78341259-78341278 MsG0480022905.01.T01:intron 55.0%
GGTCCCAAGCCAATACCACT+AGG + Chr4:78341353-78341372 None:intergenic 55.0%
GTAGCCCGAAAACGACTCTC+TGG - Chr4:78338848-78338867 MsG0480022904.01.T01:CDS 55.0%
TACCACTAGGCCAACCCAAG+TGG + Chr4:78341340-78341359 None:intergenic 55.0%
TGCCCCTGCCTCAAGTTCTA+TGG - Chr4:78343328-78343347 MsG0480022905.01.T01:intron 55.0%
TGGGTGGCATGTGCATGAGA+AGG - Chr4:78342025-78342044 MsG0480022905.01.T01:intron 55.0%
TGTGCTGCAACAAAGGCGAG+TGG + Chr4:78342071-78342090 None:intergenic 55.0%
! CTGCAACCGAGCTTGATGAC+TGG - Chr4:78341549-78341568 MsG0480022905.01.T01:intron 55.0%
! GGCGGGTAATCTAGAGTCCA+CGG + Chr4:78339012-78339031 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG - Chr4:78341353-78341372 MsG0480022905.01.T01:CDS 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - Chr4:78341354-78341373 MsG0480022905.01.T01:CDS 55.0%
ATCTCGCCGGAGCTGTTCAC+CGG - Chr4:78338430-78338449 MsG0480022905.01.T01:exon 60.0%
GCCCGAAAACGACTCTCTGG+TGG - Chr4:78338851-78338870 MsG0480022904.01.T01:CDS 60.0%
GGGGGCTTTGCCATGCATAC+TGG - Chr4:78340432-78340451 MsG0480022905.01.T01:intron 60.0%
GTCACATCGCAGCCGAGAGT+TGG - Chr4:78340946-78340965 MsG0480022905.01.T01:intron 60.0%
TCGAACCTGAGACCTCGAGG+AGG + Chr4:78341388-78341407 None:intergenic 60.0%
TGAGGTGCACCGCAATTGGC+TGG - Chr4:78338936-78338955 MsG0480022904.01.T01:CDS 60.0%
TGGAGACCGGTGAACAGCTC+CGG + Chr4:78338439-78338458 None:intergenic 60.0%
TGGCAAAGCCCCCTGCCAAA+TGG + Chr4:78340425-78340444 None:intergenic 60.0%
TGTTGCAGCACAAACCCCGG+AGG - Chr4:78342079-78342098 MsG0480022905.01.T01:intron 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG - Chr4:78341335-78341354 MsG0480022905.01.T01:CDS 60.0%
AAGATTCTCCGGCGACGGCG+AGG + Chr4:78338323-78338342 None:intergenic 65.0%
AGATTCTCCGGCGACGGCGA+GGG + Chr4:78338322-78338341 None:intergenic 65.0%
AGCTCCGGCGAGATTTCCGG+CGG + Chr4:78338424-78338443 None:intergenic 65.0%
CCAACCGCCGGAAATCTCGC+CGG - Chr4:78338417-78338436 MsG0480022905.01.T01:exon 65.0%
GTGCTCCTCCTCGAGGTCTC+AGG - Chr4:78341380-78341399 MsG0480022905.01.T01:CDS 65.0%
! TCGAGGAGGAGCACACTCCC+AGG + Chr4:78341374-78341393 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCTCG+AGG - Chr4:78341373-78341392 MsG0480022905.01.T01:CDS 65.0%
CCGGCGAGATTTCCGGCGGT+TGG + Chr4:78338420-78338439 None:intergenic 70.0%
TCCATCGCCCTCGCCGTCGC+CGG - Chr4:78338312-78338331 MsG0480022905.01.T01:exon 75.0%
! TCCGGCGACGGCGAGGGCGA+TGG + Chr4:78338316-78338335 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 78338272 78343608 78338272 ID=MsG0480022905.01;
Chr4 mRNA 78338272 78343608 78338272 ID=MsG0480022905.01.T01;Parent=MsG0480022905.01
Chr4 exon 78338272 78339107 78338272 ID=MsG0480022905.01.T01.exon;Parent=MsG0480022905.01.T01
Chr4 CDS 78338698 78339107 78338698 ID=MsG0480022905.01.T01.cds;Parent=MsG0480022905.01.T01
Chr4 CDS 78339749 78339986 78339749 ID=MsG0480022905.01.T01.cds;Parent=MsG0480022905.01.T01
Chr4 exon 78339749 78339986 78339749 ID=MsG0480022905.01.T01.exon;Parent=MsG0480022905.01.T01
Chr4 CDS 78341279 78341485 78341279 ID=MsG0480022905.01.T01.cds;Parent=MsG0480022905.01.T01
Chr4 exon 78341279 78341485 78341279 ID=MsG0480022905.01.T01.exon;Parent=MsG0480022905.01.T01
Chr4 CDS 78342323 78343075 78342323 ID=MsG0480022905.01.T01.cds;Parent=MsG0480022905.01.T01
Chr4 exon 78342323 78343180 78342323 ID=MsG0480022905.01.T01.exon;Parent=MsG0480022905.01.T01
Chr4 exon 78343416 78343608 78343416 ID=MsG0480022905.01.T01.exon;Parent=MsG0480022905.01.T01
Gene Sequence

>MsG0480022905.01.T01

ATGGGAAAAGAGAAACTAAGCTTCAAAGAACTCGACGAGTCTAGTAGCCCGAAAACGACTCTCTGGTGGTTTTTTCTTTTAGCTGCCTGTATAAAAGTTCTCCTTTTCCCGTCTTACCGTAGTACAGACTTTGAGGTGCACCGCAATTGGCTGGCATTGACACATTCCCTTCCTCTTTCACAGTGGTACTTTGACGAGACCAGTCCGTGGACTCTAGATTACCCGCCGTTCTTTGCATATTTCGAACGCTTTCTATCCATTTTTGTTCATTTTGTTGATCCTAAAATAGTGCACCTTCAGGAGGGTTTGAATTATAGCTCGAATACGGCGGTTTATTTCCAAAGATTTACTGTCATATTTTCTGATTTGTCTCTTCTTTATGGGGTTTATAGACTTACTAGGAATTTGGATTCGAGAAAGCAAAAGTTGATTTGGTCGTTGGTTATTTGGTCACCGATGCTTTTAATAGTGGACCATGTGCATTTCCAATACAATGGATTTCTCATTGGGATTTTGTTGATTTCACTTTCGTATTTGGAGGAAGGAAGGGATTTGTTAGGTGGCTTTGTTTTTGCTGTTCTTCTGTGCTTTAAACATTTATTTGCAGTGGCAGCGCCTGTGTATTTTGTTTATTTGTTGAGGCACTATTGTTGGGGTGGAATTGTAAAAGGCTTTAGTCGACTCTTGATTATGGGAGGTTTAGTTTCAGCAGTGTTTGCATCCGCATTTGGGCCGTTTTTCCATCTTGGACAGATACAACAAGTCATCCAACGATTGTTTCCATTTGGCAGGGGGCTTTGCCATGCATACTGGGCCCCAAATTTTTGGGTGTTCTATATCATGTCAGACAAAGGACTCGCCTTCCTACTCAGAAAACTTGGGTTTAATATCCAGACACCAGCAGCTTCATTCACTGCAGGGCTAGTAGGTGATTCCTCCCCTTTTAGTGTTCTACCTCGGATCACTCCATCCGTGACATTTATAATGGTTCTGCTTGCCTTATCTCCTTGTCTTTTCAAGGCTTGGAAGAATCCACGGCCACAAAGGATTACTAGATGGATATCATATGCGTATACCTGTGGTTTTCTTTTTGGGTGGCATGTGCATGAGAAGGCATCACTCCATTTTGTAATTCCACTCGCCTTTGTTGCAGCACAAACCCCGGAGGATGCAAAACATTACTTTTTGTTGTCAATAGTATCCTGCTATTCTCTTTTTCCACTACTCTTTGAGGCACAAGAGTATCCTATCAAAATTCTGTTGTTGCTTCTTCACTCCATTTTGATGTGGTCTGGCTTTTCAGCACAGTTTTACGACAGGGCTGAAACAAGAGTGTCAACTGCTCACACAAAGAAAAAAGCTGGCCAATTTGAATCTAAAGGTAGTTTAAGTGCGGATGTGAGGAATAATGGTTTTGTTATTGGCTTGATTGAGAAGATATATCTGGTTGGTCTTGTAGTTGTAGAGATATGGGGCCAATTTTTACACCCTCTGCTTTTGGGTGATAAGCTTGCATTTCTTCCCCTTATGTTGATCTCTGTATACTGTGCTCTGGGGATCATGTACTCTTGGATATGGCAGTTAAGATCCATAGTTAAATCTCATTAA
Protein sequence

>MsG0480022905.01.T01

MGKEKLSFKELDESSSPKTTLWWFFLLAACIKVLLFPSYRSTDFEVHRNWLALTHSLPLSQWYFDETSPWTLDYPPFFAYFERFLSIFVHFVDPKIVHLQEGLNYSSNTAVYFQRFTVIFSDLSLLYGVYRLTRNLDSRKQKLIWSLVIWSPMLLIVDHVHFQYNGFLIGILLISLSYLEEGRDLLGGFVFAVLLCFKHLFAVAAPVYFVYLLRHYCWGGIVKGFSRLLIMGGLVSAVFASAFGPFFHLGQIQQVIQRLFPFGRGLCHAYWAPNFWVFYIMSDKGLAFLLRKLGFNIQTPAASFTAGLVGDSSPFSVLPRITPSVTFIMVLLALSPCLFKAWKNPRPQRITRWISYAYTCGFLFGWHVHEKASLHFVIPLAFVAAQTPEDAKHYFLLSIVSCYSLFPLLFEAQEYPIKILLLLLHSILMWSGFSAQFYDRAETRVSTAHTKKKAGQFESKGSLSADVRNNGFVIGLIEKIYLVGLVVVEIWGQFLHPLLLGDKLAFLPLMLISVYCALGIMYSWIWQLRSIVKSH*