Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022917.01.T01 | XP_013446511.1 | 86.076 | 553 | 47 | 4 | 1 | 549 | 12 | 538 | 0 | 958 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022917.01.T01 | Q5N6V8 | 67.399 | 273 | 67 | 3 | 13 | 282 | 5 | 258 | 3.01E-121 | 372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022917.01.T01 | A0A072TUL7 | 86.076 | 553 | 47 | 4 | 1 | 549 | 12 | 538 | 0.0 | 958 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0780040410.01 | MsG0480022917.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022917.01.T01 | MTR_8g079940 | 86.076 | 553 | 47 | 4 | 1 | 549 | 12 | 538 | 0.0 | 958 |
MsG0480022917.01.T01 | MTR_3g086100 | 60.339 | 590 | 164 | 11 | 1 | 549 | 1 | 561 | 0.0 | 645 |
MsG0480022917.01.T01 | MTR_3g086100 | 59.800 | 500 | 150 | 9 | 91 | 549 | 1 | 490 | 0.0 | 544 |
MsG0480022917.01.T01 | MTR_1g032570 | 53.659 | 287 | 110 | 3 | 14 | 295 | 11 | 279 | 2.41e-91 | 293 |
MsG0480022917.01.T01 | MTR_4g121020 | 55.797 | 276 | 100 | 2 | 12 | 283 | 29 | 286 | 8.80e-89 | 288 |
MsG0480022917.01.T01 | MTR_4g121020 | 55.797 | 276 | 100 | 2 | 12 | 283 | 29 | 286 | 1.07e-88 | 287 |
MsG0480022917.01.T01 | MTR_2g034960 | 53.333 | 270 | 106 | 2 | 12 | 281 | 27 | 276 | 4.31e-83 | 271 |
MsG0480022917.01.T01 | MTR_3g106220 | 50.890 | 281 | 108 | 3 | 12 | 283 | 6 | 265 | 2.90e-82 | 270 |
MsG0480022917.01.T01 | MTR_1g013170 | 51.773 | 282 | 96 | 5 | 12 | 281 | 3 | 256 | 1.92e-76 | 250 |
MsG0480022917.01.T01 | MTR_4g131600 | 48.519 | 270 | 112 | 5 | 12 | 278 | 18 | 263 | 4.35e-74 | 246 |
MsG0480022917.01.T01 | MTR_4g131580 | 47.670 | 279 | 101 | 5 | 12 | 277 | 15 | 261 | 1.31e-71 | 240 |
MsG0480022917.01.T01 | MTR_2g450070 | 44.611 | 334 | 127 | 7 | 11 | 305 | 15 | 329 | 3.17e-71 | 241 |
MsG0480022917.01.T01 | MTR_2g450070 | 44.611 | 334 | 127 | 7 | 11 | 305 | 15 | 329 | 5.43e-71 | 241 |
MsG0480022917.01.T01 | MTR_4g131570 | 48.496 | 266 | 117 | 2 | 14 | 277 | 17 | 264 | 1.91e-70 | 237 |
MsG0480022917.01.T01 | MTR_1g013180 | 50.741 | 270 | 101 | 4 | 12 | 273 | 154 | 399 | 1.01e-68 | 234 |
MsG0480022917.01.T01 | MTR_7g117705 | 45.051 | 293 | 121 | 5 | 12 | 292 | 3 | 267 | 1.37e-67 | 226 |
MsG0480022917.01.T01 | MTR_1g032570 | 59.788 | 189 | 71 | 2 | 91 | 274 | 1 | 189 | 2.93e-67 | 228 |
MsG0480022917.01.T01 | MTR_3g102600 | 42.712 | 295 | 83 | 5 | 12 | 305 | 6 | 215 | 5.39e-61 | 201 |
MsG0480022917.01.T01 | MTR_3g102600 | 43.750 | 256 | 66 | 3 | 12 | 267 | 6 | 183 | 1.14e-55 | 186 |
MsG0480022917.01.T01 | MTR_4g021760 | 38.406 | 276 | 121 | 7 | 13 | 288 | 10 | 236 | 2.98e-53 | 183 |
MsG0480022917.01.T01 | MTR_3g102600 | 43.534 | 232 | 63 | 4 | 75 | 305 | 2 | 166 | 4.71e-52 | 176 |
MsG0480022917.01.T01 | MTR_4g021790 | 39.847 | 261 | 113 | 5 | 13 | 273 | 9 | 225 | 5.53e-52 | 179 |
MsG0480022917.01.T01 | MTR_3g102590 | 42.754 | 276 | 87 | 5 | 12 | 284 | 6 | 213 | 5.74e-50 | 172 |
MsG0480022917.01.T01 | MTR_4g021845 | 37.549 | 253 | 114 | 5 | 13 | 265 | 9 | 217 | 4.19e-49 | 169 |
MsG0480022917.01.T01 | MTR_4g021855 | 36.782 | 261 | 121 | 4 | 13 | 273 | 9 | 225 | 1.22e-47 | 168 |
MsG0480022917.01.T01 | MTR_4g121020 | 51.977 | 177 | 81 | 1 | 111 | 283 | 6 | 182 | 9.60e-47 | 172 |
MsG0480022917.01.T01 | MTR_3g102590 | 43.137 | 255 | 76 | 4 | 12 | 265 | 6 | 192 | 7.81e-46 | 160 |
MsG0480022917.01.T01 | MTR_3g102600 | 45.078 | 193 | 46 | 2 | 75 | 267 | 2 | 134 | 1.35e-45 | 157 |
MsG0480022917.01.T01 | MTR_6g045327 | 34.686 | 271 | 123 | 8 | 8 | 271 | 4 | 227 | 2.17e-39 | 148 |
MsG0480022917.01.T01 | MTR_0450s0040 | 33.840 | 263 | 147 | 5 | 51 | 310 | 23 | 261 | 4.21e-38 | 143 |
MsG0480022917.01.T01 | MTR_8g105600 | 32.721 | 272 | 157 | 3 | 12 | 282 | 7 | 253 | 5.01e-38 | 148 |
MsG0480022917.01.T01 | MTR_1g013160 | 48.734 | 158 | 59 | 4 | 94 | 239 | 1 | 148 | 2.36e-34 | 127 |
MsG0480022917.01.T01 | MTR_7g026400 | 34.310 | 239 | 143 | 3 | 62 | 300 | 17 | 241 | 1.53e-33 | 135 |
MsG0480022917.01.T01 | MTR_5g055260 | 29.119 | 261 | 114 | 6 | 13 | 273 | 9 | 198 | 1.29e-27 | 112 |
MsG0480022917.01.T01 | MTR_4g023980 | 33.129 | 163 | 84 | 2 | 79 | 241 | 36 | 173 | 7.05e-27 | 107 |
MsG0480022917.01.T01 | MTR_8g093040 | 29.434 | 265 | 128 | 5 | 14 | 278 | 14 | 219 | 4.04e-25 | 105 |
MsG0480022917.01.T01 | MTR_8g032710 | 27.473 | 273 | 158 | 8 | 16 | 268 | 19 | 271 | 1.76e-20 | 95.1 |
MsG0480022917.01.T01 | MTR_3g092780 | 32.275 | 189 | 96 | 6 | 18 | 201 | 56 | 217 | 3.26e-19 | 91.7 |
MsG0480022917.01.T01 | MTR_3g092780 | 32.275 | 189 | 96 | 6 | 18 | 201 | 56 | 217 | 3.43e-19 | 91.7 |
MsG0480022917.01.T01 | MTR_6g016850 | 30.435 | 161 | 86 | 5 | 14 | 167 | 9 | 150 | 3.60e-19 | 85.5 |
MsG0480022917.01.T01 | MTR_3g092780 | 32.275 | 189 | 95 | 6 | 18 | 201 | 56 | 216 | 9.39e-19 | 90.5 |
MsG0480022917.01.T01 | MTR_3g092780 | 32.275 | 189 | 95 | 6 | 18 | 201 | 56 | 216 | 1.10e-18 | 90.1 |
MsG0480022917.01.T01 | MTR_4g064730 | 58.333 | 72 | 29 | 1 | 214 | 284 | 129 | 200 | 9.05e-18 | 84.7 |
MsG0480022917.01.T01 | MTR_7g089010 | 59.677 | 62 | 25 | 0 | 214 | 275 | 89 | 150 | 1.09e-16 | 81.3 |
MsG0480022917.01.T01 | MTR_7g118260 | 32.877 | 146 | 71 | 3 | 15 | 154 | 11 | 135 | 1.10e-16 | 83.6 |
MsG0480022917.01.T01 | MTR_7g118260 | 32.877 | 146 | 71 | 3 | 15 | 154 | 11 | 135 | 1.10e-16 | 83.6 |
MsG0480022917.01.T01 | MTR_3g037390 | 37.615 | 109 | 64 | 2 | 50 | 155 | 39 | 146 | 1.66e-16 | 83.2 |
MsG0480022917.01.T01 | MTR_4g108880 | 37.615 | 109 | 64 | 2 | 50 | 155 | 48 | 155 | 5.85e-16 | 81.3 |
MsG0480022917.01.T01 | MTR_4g061360 | 31.915 | 141 | 73 | 3 | 18 | 154 | 89 | 210 | 2.68e-15 | 79.7 |
MsG0480022917.01.T01 | MTR_4g098870 | 54.795 | 73 | 32 | 1 | 215 | 286 | 309 | 381 | 1.06e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_4g098870 | 54.795 | 73 | 32 | 1 | 215 | 286 | 309 | 381 | 1.06e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_4g098870 | 54.795 | 73 | 32 | 1 | 215 | 286 | 329 | 401 | 1.08e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_4g098870 | 54.795 | 73 | 32 | 1 | 215 | 286 | 329 | 401 | 1.10e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_4g098870 | 54.795 | 73 | 32 | 1 | 215 | 286 | 348 | 420 | 1.13e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_1g067110 | 37.037 | 108 | 65 | 1 | 50 | 154 | 99 | 206 | 1.29e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_1g067110 | 37.037 | 108 | 65 | 1 | 50 | 154 | 99 | 206 | 1.29e-14 | 77.4 |
MsG0480022917.01.T01 | MTR_5g014040 | 62.500 | 56 | 21 | 0 | 215 | 270 | 310 | 365 | 1.82e-14 | 76.6 |
MsG0480022917.01.T01 | MTR_8g024260 | 31.915 | 141 | 73 | 3 | 20 | 156 | 38 | 159 | 2.29e-14 | 76.6 |
MsG0480022917.01.T01 | MTR_2g090675 | 46.377 | 69 | 37 | 0 | 215 | 283 | 160 | 228 | 3.03e-13 | 72.4 |
MsG0480022917.01.T01 | MTR_4g078810 | 46.377 | 69 | 37 | 0 | 215 | 283 | 157 | 225 | 3.66e-13 | 72.0 |
MsG0480022917.01.T01 | MTR_5g014040 | 53.846 | 65 | 25 | 1 | 215 | 274 | 270 | 334 | 1.48e-12 | 70.5 |
MsG0480022917.01.T01 | MTR_5g014040 | 57.377 | 61 | 21 | 1 | 215 | 270 | 310 | 370 | 1.78e-12 | 70.1 |
MsG0480022917.01.T01 | MTR_7g088070 | 49.315 | 73 | 34 | 2 | 216 | 285 | 50 | 122 | 5.69e-12 | 67.0 |
MsG0480022917.01.T01 | MTR_6g088950 | 32.941 | 85 | 57 | 0 | 71 | 155 | 43 | 127 | 8.35e-12 | 65.1 |
MsG0480022917.01.T01 | MTR_1g093080 | 46.479 | 71 | 37 | 1 | 215 | 284 | 210 | 280 | 1.69e-11 | 66.6 |
MsG0480022917.01.T01 | MTR_6g032990 | 53.448 | 58 | 26 | 1 | 216 | 272 | 42 | 99 | 2.21e-11 | 66.2 |
MsG0480022917.01.T01 | MTR_2g086450 | 46.667 | 75 | 33 | 2 | 216 | 289 | 45 | 113 | 2.94e-11 | 65.9 |
MsG0480022917.01.T01 | MTR_5g041350 | 52.727 | 55 | 25 | 1 | 216 | 269 | 15 | 69 | 4.60e-11 | 65.1 |
MsG0480022917.01.T01 | MTR_6g453220 | 75.000 | 44 | 11 | 0 | 231 | 274 | 378 | 421 | 5.01e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022917.01.T01 | AT1G67710 | 47.582 | 517 | 199 | 16 | 15 | 514 | 8 | 469 | 3.23e-121 | 367 |
MsG0480022917.01.T01 | AT1G67710 | 45.125 | 441 | 188 | 15 | 91 | 514 | 1 | 404 | 3.74e-90 | 285 |
MsG0480022917.01.T01 | AT3G16857 | 50.311 | 322 | 115 | 8 | 11 | 309 | 30 | 329 | 3.24e-82 | 270 |
MsG0480022917.01.T01 | AT3G16857 | 50.311 | 322 | 115 | 8 | 11 | 309 | 30 | 329 | 4.24e-82 | 270 |
MsG0480022917.01.T01 | AT2G01760 | 48.675 | 302 | 114 | 6 | 9 | 280 | 2 | 292 | 8.71e-81 | 259 |
MsG0480022917.01.T01 | AT2G01760 | 49.129 | 287 | 107 | 5 | 9 | 280 | 2 | 264 | 8.35e-78 | 250 |
MsG0480022917.01.T01 | AT2G25180 | 51.264 | 277 | 103 | 3 | 11 | 281 | 10 | 260 | 1.03e-77 | 256 |
MsG0480022917.01.T01 | AT1G67710 | 42.280 | 421 | 189 | 15 | 111 | 514 | 12 | 395 | 1.34e-73 | 241 |
MsG0480022917.01.T01 | AT4G31920 | 47.703 | 283 | 104 | 5 | 11 | 287 | 10 | 254 | 9.18e-71 | 237 |
MsG0480022917.01.T01 | AT3G16857 | 52.290 | 262 | 98 | 7 | 71 | 309 | 2 | 259 | 8.73e-68 | 231 |
MsG0480022917.01.T01 | AT5G58080 | 46.739 | 276 | 117 | 5 | 12 | 283 | 12 | 261 | 3.22e-61 | 213 |
MsG0480022917.01.T01 | AT2G01760 | 50.732 | 205 | 80 | 4 | 91 | 280 | 1 | 199 | 1.84e-56 | 192 |
MsG0480022917.01.T01 | AT5G49240 | 36.614 | 254 | 140 | 3 | 14 | 265 | 38 | 272 | 7.45e-43 | 155 |
MsG0480022917.01.T01 | AT1G49190 | 30.986 | 284 | 145 | 6 | 11 | 275 | 27 | 278 | 4.53e-34 | 134 |
MsG0480022917.01.T01 | AT5G07210 | 30.375 | 293 | 154 | 9 | 18 | 277 | 16 | 291 | 6.19e-31 | 127 |
MsG0480022917.01.T01 | AT3G62670 | 35.922 | 206 | 115 | 4 | 70 | 268 | 73 | 268 | 8.21e-31 | 125 |
MsG0480022917.01.T01 | AT5G07210 | 30.584 | 291 | 148 | 8 | 18 | 277 | 16 | 283 | 2.44e-30 | 125 |
MsG0480022917.01.T01 | AT2G27070 | 28.852 | 305 | 164 | 5 | 18 | 290 | 16 | 299 | 6.30e-29 | 121 |
MsG0480022917.01.T01 | AT1G49190 | 36.301 | 146 | 75 | 1 | 11 | 156 | 27 | 154 | 7.43e-23 | 103 |
MsG0480022917.01.T01 | AT5G24470 | 25.478 | 314 | 174 | 10 | 17 | 306 | 49 | 326 | 5.13e-18 | 87.8 |
MsG0480022917.01.T01 | AT2G46790 | 33.333 | 141 | 71 | 3 | 18 | 154 | 37 | 158 | 1.08e-17 | 86.3 |
MsG0480022917.01.T01 | AT2G46790 | 33.333 | 141 | 71 | 3 | 18 | 154 | 37 | 158 | 1.26e-17 | 86.3 |
MsG0480022917.01.T01 | AT3G46640 | 55.714 | 70 | 30 | 1 | 206 | 275 | 135 | 203 | 2.40e-17 | 83.6 |
MsG0480022917.01.T01 | AT3G46640 | 55.714 | 70 | 30 | 1 | 206 | 275 | 135 | 203 | 2.40e-17 | 83.6 |
MsG0480022917.01.T01 | AT3G46640 | 59.677 | 62 | 25 | 0 | 214 | 275 | 142 | 203 | 3.76e-17 | 83.2 |
MsG0480022917.01.T01 | AT2G40970 | 59.677 | 62 | 25 | 0 | 214 | 275 | 103 | 164 | 3.97e-17 | 81.6 |
MsG0480022917.01.T01 | AT5G59570 | 60.656 | 61 | 24 | 0 | 215 | 275 | 140 | 200 | 6.22e-17 | 82.0 |
MsG0480022917.01.T01 | AT5G59570 | 60.656 | 61 | 24 | 0 | 215 | 275 | 140 | 200 | 6.22e-17 | 82.0 |
MsG0480022917.01.T01 | AT3G10760 | 59.677 | 62 | 25 | 0 | 214 | 275 | 103 | 164 | 7.36e-17 | 82.4 |
MsG0480022917.01.T01 | AT5G05090 | 46.667 | 105 | 53 | 2 | 214 | 318 | 79 | 180 | 7.68e-17 | 81.3 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 2.58e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 2.58e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 2.58e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G60100 | 35.374 | 147 | 71 | 4 | 18 | 160 | 64 | 190 | 2.79e-16 | 82.4 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 3.78e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 3.78e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G60100 | 35.256 | 156 | 77 | 4 | 18 | 169 | 64 | 199 | 3.78e-16 | 81.6 |
MsG0480022917.01.T01 | AT5G44190 | 50.000 | 76 | 38 | 0 | 215 | 290 | 146 | 221 | 3.35e-15 | 78.2 |
MsG0480022917.01.T01 | AT5G44190 | 50.000 | 76 | 38 | 0 | 215 | 290 | 146 | 221 | 3.39e-15 | 77.8 |
MsG0480022917.01.T01 | AT5G61380 | 33.333 | 141 | 73 | 3 | 18 | 155 | 19 | 141 | 5.43e-15 | 78.6 |
MsG0480022917.01.T01 | AT2G20570 | 48.000 | 75 | 39 | 0 | 215 | 289 | 152 | 226 | 1.93e-14 | 75.9 |
MsG0480022917.01.T01 | AT5G02810 | 39.091 | 110 | 62 | 2 | 49 | 154 | 91 | 199 | 3.37e-14 | 76.3 |
MsG0480022917.01.T01 | AT2G20570 | 45.238 | 84 | 46 | 0 | 206 | 289 | 159 | 242 | 5.84e-14 | 74.7 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 7.90e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 7.90e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 7.90e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 7.90e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 7.90e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT4G18020 | 50.769 | 65 | 32 | 0 | 216 | 280 | 296 | 360 | 8.89e-13 | 71.2 |
MsG0480022917.01.T01 | AT5G18240 | 56.364 | 55 | 23 | 1 | 216 | 269 | 45 | 99 | 9.30e-12 | 67.4 |
MsG0480022917.01.T01 | AT5G18240 | 56.364 | 55 | 23 | 1 | 216 | 269 | 45 | 99 | 9.30e-12 | 67.4 |
MsG0480022917.01.T01 | AT5G18240 | 56.364 | 55 | 23 | 1 | 216 | 269 | 45 | 99 | 9.72e-12 | 67.4 |
MsG0480022917.01.T01 | AT5G18240 | 56.364 | 55 | 23 | 1 | 216 | 269 | 45 | 99 | 9.98e-12 | 67.4 |
MsG0480022917.01.T01 | AT5G18240 | 56.364 | 55 | 23 | 1 | 216 | 269 | 45 | 99 | 9.98e-12 | 67.4 |
MsG0480022917.01.T01 | AT3G04030 | 54.545 | 55 | 24 | 1 | 216 | 269 | 45 | 99 | 1.36e-11 | 67.0 |
MsG0480022917.01.T01 | AT3G04030 | 54.545 | 55 | 24 | 1 | 216 | 269 | 45 | 99 | 1.49e-11 | 67.0 |
Find 94 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGAACTCTTTCTTATCTT+TGG | 0.198401 | 4:-78569127 | None:intergenic |
TCTTGGTTGCATTTATGATA+TGG | 0.215616 | 4:+78569519 | MsG0480022917.01.T01:CDS |
TGTTGCTGTGTAACATTTAA+TGG | 0.220612 | 4:-78569304 | None:intergenic |
TTGAAAGTGATTGGTCAATT+TGG | 0.229447 | 4:-78569330 | None:intergenic |
ATCATTTGAGATGAGGCTTT+TGG | 0.254966 | 4:-78569440 | None:intergenic |
GAACACACTTGTACAATTAA+AGG | 0.258335 | 4:+78569264 | MsG0480022917.01.T01:CDS |
ATTATTTGCTTAAGCCTATA+AGG | 0.266042 | 4:+78568060 | MsG0480022917.01.T01:CDS |
CGCAATTCTTTCATCCTTAT+AGG | 0.272142 | 4:-78568074 | None:intergenic |
TACCCAAAAGTAAGTTTCTT+TGG | 0.274466 | 4:-78569549 | None:intergenic |
CTACCAAAGAAACTTACTTT+TGG | 0.276715 | 4:+78569546 | MsG0480022917.01.T01:CDS |
TGGAATTAATTGAAAGTGAT+TGG | 0.324987 | 4:-78569339 | None:intergenic |
TTTGAAGTTAAAATGATATC+AGG | 0.326062 | 4:-78569469 | None:intergenic |
AAGTTCGATCTACGAGTTCT+TGG | 0.327718 | 4:-78568277 | None:intergenic |
TCATATATGTAATATTTGAT+AGG | 0.330164 | 4:+78569923 | MsG0480022917.01.T01:three_prime_UTR |
GAAGGTGCAATCGATAGTTT+TGG | 0.347432 | 4:+78569022 | MsG0480022917.01.T01:CDS |
ATCTGCTGAAGCATACAAAT+TGG | 0.351333 | 4:-78569707 | None:intergenic |
TTACATATATGAAGCTTGTT+TGG | 0.353901 | 4:-78569912 | None:intergenic |
TGAGTCAGCTTCCACACCTT+TGG | 0.366813 | 4:+78569573 | MsG0480022917.01.T01:CDS |
AAATGTTGCTAGTCACTTGC+AGG | 0.372643 | 4:+78568618 | MsG0480022917.01.T01:CDS |
TACTGCAGTTATTTCATTTG+CGG | 0.374402 | 4:-78569793 | None:intergenic |
TAAAGAAAGCTAGAGTAGTT+TGG | 0.378977 | 4:+78568303 | MsG0480022917.01.T01:CDS |
AATGTAATCATTCTTGTAAT+CGG | 0.392849 | 4:-78569368 | None:intergenic |
GGAATTCACTTAATGAGAAA+TGG | 0.405209 | 4:+78568161 | MsG0480022917.01.T01:CDS |
TTACTTCTGATTCCAGAGAT+TGG | 0.407149 | 4:-78569162 | None:intergenic |
AAAACACCAAGATTTAATCT+TGG | 0.410977 | 4:+78569502 | MsG0480022917.01.T01:CDS |
CATATATGTAATATTTGATA+GGG | 0.415316 | 4:+78569924 | MsG0480022917.01.T01:three_prime_UTR |
CACATGTTGCTTAGCAATAG+AGG | 0.420963 | 4:+78567638 | MsG0480022917.01.T01:CDS |
CCATACCAACACAGTACTCT+TGG | 0.432925 | 4:+78569206 | MsG0480022917.01.T01:CDS |
TTTGTTGAAGATGCATGAAA+AGG | 0.434535 | 4:-78569761 | None:intergenic |
ATTCTTGTAATCGGAGGGAT+TGG | 0.437838 | 4:-78569359 | None:intergenic |
CATATGCATCTTTACTTTCG+CGG | 0.445631 | 4:-78567674 | None:intergenic |
AGCTTGAAACCATCCATGTC+AGG | 0.458164 | 4:-78567723 | None:intergenic |
GGTAGGTCTTAACCAATCTC+TGG | 0.459702 | 4:+78569150 | MsG0480022917.01.T01:CDS |
CATATTCACCTTGTAACAAA+AGG | 0.468727 | 4:-78569612 | None:intergenic |
AAATGAACTTAATGAAGAAA+AGG | 0.469526 | 4:+78568228 | MsG0480022917.01.T01:CDS |
ATGCAACCAAGATTAAATCT+TGG | 0.480002 | 4:-78569508 | None:intergenic |
TGAAAGAATTGCGAAACATA+TGG | 0.480046 | 4:+78568084 | MsG0480022917.01.T01:CDS |
GATTTACCTTCAAAAGATCC+AGG | 0.483223 | 4:+78568959 | MsG0480022917.01.T01:CDS |
CTTCTTCCATGTGCTAAAAG+TGG | 0.485282 | 4:+78567144 | MsG0480022917.01.T01:CDS |
TTCAAGCTTCTTGAACATGT+TGG | 0.489231 | 4:+78567738 | MsG0480022917.01.T01:CDS |
TTGAGAAAGCTTAAACATCC+TGG | 0.491396 | 4:-78568977 | None:intergenic |
TATGCAGTGATGTCTGTTGA+TGG | 0.505268 | 4:+78567993 | MsG0480022917.01.T01:intron |
AGCTTCCACACCTTTGGACG+AGG | 0.506847 | 4:+78569579 | MsG0480022917.01.T01:CDS |
GTTAAAGCTGTGAATCAACT+TGG | 0.507253 | 4:+78568350 | MsG0480022917.01.T01:CDS |
GGATCAGATCACACTGATGA+TGG | 0.509373 | 4:+78568182 | MsG0480022917.01.T01:CDS |
ACGAGAACTCGTAGACCAGC+TGG | 0.523070 | 4:-78567024 | None:intergenic |
CATTAGTCCTGTGAATTCAT+CGG | 0.523463 | 4:+78569387 | MsG0480022917.01.T01:CDS |
TGAACATGTTGGACTTGAGA+TGG | 0.525184 | 4:+78567749 | MsG0480022917.01.T01:CDS |
AAAATTCAAATGGATACTAC+AGG | 0.527020 | 4:+78569064 | MsG0480022917.01.T01:CDS |
CAAATGGATACTACAGGTCA+TGG | 0.528328 | 4:+78569070 | MsG0480022917.01.T01:CDS |
GAGATTGATCATTTGAGATG+AGG | 0.529752 | 4:-78569447 | None:intergenic |
GTGTAACATTTAATGGCAAA+TGG | 0.530650 | 4:-78569297 | None:intergenic |
AACTGCAGTAGAATGAGGTA+TGG | 0.533065 | 4:+78569806 | MsG0480022917.01.T01:three_prime_UTR |
GGAACTTCAGCAATAAACCT+TGG | 0.534763 | 4:-78569682 | None:intergenic |
TAAAAGAACTTACTAATGAC+AGG | 0.538868 | 4:-78567777 | None:intergenic |
GTGTTCTGTTCTTCTTCGAG+TGG | 0.552522 | 4:-78569247 | None:intergenic |
GAAATAACTGCAGTAGAATG+AGG | 0.555986 | 4:+78569801 | MsG0480022917.01.T01:three_prime_UTR |
CGATGTAAACATGCCTGACA+TGG | 0.555999 | 4:+78567710 | MsG0480022917.01.T01:CDS |
GCAACCTACTCAAGTATAGC+CGG | 0.557803 | 4:-78568889 | None:intergenic |
TAATCATTCTTGTAATCGGA+GGG | 0.562863 | 4:-78569364 | None:intergenic |
TGGTGGAGTCAAATGCTGTA+TGG | 0.564365 | 4:-78569186 | None:intergenic |
AAAGCATCAAGGTGTGGAGA+AGG | 0.568756 | 4:-78567000 | None:intergenic |
CCAAGAGTACTGTGTTGGTA+TGG | 0.569363 | 4:-78569206 | None:intergenic |
AATGATCAGAAATTGTCCTC+AGG | 0.572148 | 4:+78568920 | MsG0480022917.01.T01:CDS |
GCTGAAGCATACAAATTGGT+AGG | 0.582128 | 4:-78569703 | None:intergenic |
TCATTCCAAGAGTACTGTGT+TGG | 0.583367 | 4:-78569211 | None:intergenic |
TGTCAGAGTATTATGATCCA+AGG | 0.585355 | 4:+78569665 | MsG0480022917.01.T01:CDS |
ATATATGTAATATTTGATAG+GGG | 0.589407 | 4:+78569925 | MsG0480022917.01.T01:three_prime_UTR |
CTGTTGATGGAGAAACAAGC+AGG | 0.593651 | 4:+78568006 | MsG0480022917.01.T01:CDS |
GTGATGAAAGGTGTTCAACA+TGG | 0.594525 | 4:+78568029 | MsG0480022917.01.T01:CDS |
GTAATCATTCTTGTAATCGG+AGG | 0.596210 | 4:-78569365 | None:intergenic |
ATAAGAAAGAGTTCAGAGGT+AGG | 0.597933 | 4:+78569133 | MsG0480022917.01.T01:CDS |
AAGTTTAAGTCCTCGTCCAA+AGG | 0.599539 | 4:-78569589 | None:intergenic |
AGAGTACTGTGTTGGTATGG+TGG | 0.600173 | 4:-78569203 | None:intergenic |
GACCAGCTGGAAAAGCATCA+AGG | 0.602271 | 4:-78567011 | None:intergenic |
TTGTTGATGATGATCTAACT+TGG | 0.602339 | 4:+78567046 | MsG0480022917.01.T01:CDS |
AGCTAGAGTAGTTTGGTCTG+TGG | 0.615227 | 4:+78568310 | MsG0480022917.01.T01:CDS |
GAAGACACCGATGAATTCAC+AGG | 0.619719 | 4:-78569394 | None:intergenic |
AATACCGGCTATACTTGAGT+AGG | 0.620491 | 4:+78568885 | MsG0480022917.01.T01:CDS |
CTCTATTGCTAAGCAACATG+TGG | 0.620636 | 4:-78567637 | None:intergenic |
TAAGTCCTCGTCCAAAGGTG+TGG | 0.621176 | 4:-78569584 | None:intergenic |
AAAGATAAGAAAGAGTTCAG+AGG | 0.625719 | 4:+78569129 | MsG0480022917.01.T01:CDS |
GAAACAAGCAGGGTGATGAA+AGG | 0.627020 | 4:+78568017 | MsG0480022917.01.T01:CDS |
GCTGGAAAAGCATCAAGGTG+TGG | 0.628160 | 4:-78567006 | None:intergenic |
AAGAGAATTTGAAAGTCTCG+AGG | 0.633493 | 4:+78568139 | MsG0480022917.01.T01:CDS |
TGAATGCTTTATTCTACCTG+AGG | 0.641744 | 4:-78568936 | None:intergenic |
GATGGTAACATGTTTGCTGT+AGG | 0.648059 | 4:+78568200 | MsG0480022917.01.T01:CDS |
TAGATTTGATGAATGTTCCG+TGG | 0.652142 | 4:+78568584 | MsG0480022917.01.T01:CDS |
TTCAGCAAGCAACAAAACGA+AGG | 0.652173 | 4:+78569004 | MsG0480022917.01.T01:CDS |
AGAGAATTTGAAAGTCTCGA+GGG | 0.654792 | 4:+78568140 | MsG0480022917.01.T01:CDS |
TGAATGAAAGAAAGAAACCT+CGG | 0.668412 | 4:-78567107 | None:intergenic |
GTAAACATGCCTGACATGGA+TGG | 0.678855 | 4:+78567714 | MsG0480022917.01.T01:CDS |
GTGAAACGAAGTTAGACGCG+CGG | 0.722340 | 4:+78569877 | MsG0480022917.01.T01:three_prime_UTR |
TGTTGATGGAGAAACAAGCA+GGG | 0.723682 | 4:+78568007 | MsG0480022917.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTTTTTTAGTATAAATT+AGG | - | Chr4:78567524-78567543 | None:intergenic | 10.0% |
!!! | TGATAAAAATAATTTCTTTT+TGG | + | Chr4:78568537-78568556 | MsG0480022917.01.T01:intron | 10.0% |
!!! | TTTTCTTTGAAAAAAAAAAA+AGG | - | Chr4:78567288-78567307 | None:intergenic | 10.0% |
!! | ATATATGTAATATTTGATAG+GGG | + | Chr4:78569925-78569944 | MsG0480022917.01.T01:three_prime_UTR | 15.0% |
!! | CATATATGTAATATTTGATA+GGG | + | Chr4:78569924-78569943 | MsG0480022917.01.T01:three_prime_UTR | 15.0% |
!! | TCATATATGTAATATTTGAT+AGG | + | Chr4:78569923-78569942 | MsG0480022917.01.T01:three_prime_UTR | 15.0% |
!! | TTGAAAAAAAAAAAAGGAAT+TGG | - | Chr4:78567282-78567301 | None:intergenic | 15.0% |
!!! | AAGAGCAAAATTTTATTATT+AGG | - | Chr4:78568861-78568880 | None:intergenic | 15.0% |
!!! | ATTTTTTTAGCATTTTTTCA+AGG | - | Chr4:78567080-78567099 | None:intergenic | 15.0% |
!!! | TCTTTTAACTTAATTAACAA+AGG | + | Chr4:78567389-78567408 | MsG0480022917.01.T01:intron | 15.0% |
!!! | TTTCTTAAATTTGCAAATTT+TGG | + | Chr4:78567557-78567576 | MsG0480022917.01.T01:intron | 15.0% |
!! | AAATGAACTTAATGAAGAAA+AGG | + | Chr4:78568228-78568247 | MsG0480022917.01.T01:CDS | 20.0% |
!! | AATGTAATCATTCTTGTAAT+CGG | - | Chr4:78569371-78569390 | None:intergenic | 20.0% |
!!! | AAGTGTTGTTTGTAAAATAA+TGG | - | Chr4:78567965-78567984 | None:intergenic | 20.0% |
!!! | ATCAAATCTAGAATTTTCTT+GGG | - | Chr4:78568574-78568593 | None:intergenic | 20.0% |
!!! | ATCTTAGTTTTTGAGTTTAA+GGG | + | Chr4:78569987-78570006 | MsG0480022917.01.T01:three_prime_UTR | 20.0% |
!!! | TAAACTTTTAACTTTAGTAG+AGG | - | Chr4:78568665-78568684 | None:intergenic | 20.0% |
!!! | TATCTTAGTTTTTGAGTTTA+AGG | + | Chr4:78569986-78570005 | MsG0480022917.01.T01:three_prime_UTR | 20.0% |
!!! | TTTGAAGTTAAAATGATATC+AGG | - | Chr4:78569472-78569491 | None:intergenic | 20.0% |
! | AAAACACCAAGATTTAATCT+TGG | + | Chr4:78569502-78569521 | MsG0480022917.01.T01:CDS | 25.0% |
! | AAAATTCAAATGGATACTAC+AGG | + | Chr4:78569064-78569083 | MsG0480022917.01.T01:CDS | 25.0% |
! | ATTATTTGCTTAAGCCTATA+AGG | + | Chr4:78568060-78568079 | MsG0480022917.01.T01:CDS | 25.0% |
! | CTTAAGAAAAAGAATACATG+AGG | + | Chr4:78568115-78568134 | MsG0480022917.01.T01:CDS | 25.0% |
! | TAAAAGAACTTACTAATGAC+AGG | - | Chr4:78567780-78567799 | None:intergenic | 25.0% |
! | TGGAATTAATTGAAAGTGAT+TGG | - | Chr4:78569342-78569361 | None:intergenic | 25.0% |
! | TGGGACATTAAAAATTCAAA+TGG | + | Chr4:78569054-78569073 | MsG0480022917.01.T01:CDS | 25.0% |
! | TTGAATTGTACTGAACTTAT+TGG | - | Chr4:78567206-78567225 | None:intergenic | 25.0% |
!! | TTAAACTTCCTTTTGTTACA+AGG | + | Chr4:78569604-78569623 | MsG0480022917.01.T01:CDS | 25.0% |
!! | TTACATATATGAAGCTTGTT+TGG | - | Chr4:78569915-78569934 | None:intergenic | 25.0% |
!!! | AATATTTCTGAGATGTGTAT+TGG | - | Chr4:78568771-78568790 | None:intergenic | 25.0% |
!!! | ATAGTTTTGGATATTCAGAT+GGG | + | Chr4:78569035-78569054 | MsG0480022917.01.T01:CDS | 25.0% |
!!! | CATCAAATCTAGAATTTTCT+TGG | - | Chr4:78568575-78568594 | None:intergenic | 25.0% |
!!! | TACCAAAGAAACTTACTTTT+GGG | + | Chr4:78569547-78569566 | MsG0480022917.01.T01:CDS | 25.0% |
!!! | TGTCTTCTAGCTTTTTTTTT+CGG | - | Chr4:78567894-78567913 | None:intergenic | 25.0% |
!!! | TTTTGAGTTTGAAAACTTAC+AGG | + | Chr4:78568833-78568852 | MsG0480022917.01.T01:intron | 25.0% |
AAAGATAAGAAAGAGTTCAG+AGG | + | Chr4:78569129-78569148 | MsG0480022917.01.T01:CDS | 30.0% | |
ATGCAACCAAGATTAAATCT+TGG | - | Chr4:78569511-78569530 | None:intergenic | 30.0% | |
ATTAGAAGCCAACAAAAATG+TGG | - | Chr4:78567257-78567276 | None:intergenic | 30.0% | |
CATATTCACCTTGTAACAAA+AGG | - | Chr4:78569615-78569634 | None:intergenic | 30.0% | |
CTCTTACACAAAAGATATGA+TGG | - | Chr4:78568510-78568529 | None:intergenic | 30.0% | |
GAACACACTTGTACAATTAA+AGG | + | Chr4:78569264-78569283 | MsG0480022917.01.T01:CDS | 30.0% | |
GGAATTCACTTAATGAGAAA+TGG | + | Chr4:78568161-78568180 | MsG0480022917.01.T01:CDS | 30.0% | |
GTACCTACTAGTAATATTCT+TGG | + | Chr4:78567867-78567886 | MsG0480022917.01.T01:intron | 30.0% | |
GTAGATTTATTTAGTGTGCT+TGG | - | Chr4:78568440-78568459 | None:intergenic | 30.0% | |
GTGTAACATTTAATGGCAAA+TGG | - | Chr4:78569300-78569319 | None:intergenic | 30.0% | |
TAAAGAAAGCTAGAGTAGTT+TGG | + | Chr4:78568303-78568322 | MsG0480022917.01.T01:CDS | 30.0% | |
TAATCATTCTTGTAATCGGA+GGG | - | Chr4:78569367-78569386 | None:intergenic | 30.0% | |
TACCCAAAAGTAAGTTTCTT+TGG | - | Chr4:78569552-78569571 | None:intergenic | 30.0% | |
TCTGAACTCTTTCTTATCTT+TGG | - | Chr4:78569130-78569149 | None:intergenic | 30.0% | |
TCTTGGTTGCATTTATGATA+TGG | + | Chr4:78569519-78569538 | MsG0480022917.01.T01:CDS | 30.0% | |
TGAAAGAATTGCGAAACATA+TGG | + | Chr4:78568084-78568103 | MsG0480022917.01.T01:CDS | 30.0% | |
TGAATGAAAGAAAGAAACCT+CGG | - | Chr4:78567110-78567129 | None:intergenic | 30.0% | |
TGTTGCTGTGTAACATTTAA+TGG | - | Chr4:78569307-78569326 | None:intergenic | 30.0% | |
TTTGTTGAAGATGCATGAAA+AGG | - | Chr4:78569764-78569783 | None:intergenic | 30.0% | |
! | ATTTTGCTCTTCAGAAATAC+CGG | + | Chr4:78568870-78568889 | MsG0480022917.01.T01:intron | 30.0% |
! | CTAAAAAAATGCTTTTACCG+AGG | + | Chr4:78567090-78567109 | MsG0480022917.01.T01:CDS | 30.0% |
! | CTACCAAAGAAACTTACTTT+TGG | + | Chr4:78569546-78569565 | MsG0480022917.01.T01:CDS | 30.0% |
! | TACTGCAGTTATTTCATTTG+CGG | - | Chr4:78569796-78569815 | None:intergenic | 30.0% |
! | TTGAAAGTGATTGGTCAATT+TGG | - | Chr4:78569333-78569352 | None:intergenic | 30.0% |
!! | AATTTCTTTTTGGCAGAAGT+TGG | + | Chr4:78568547-78568566 | MsG0480022917.01.T01:intron | 30.0% |
!! | TATATACCACTTTTAGCACA+TGG | - | Chr4:78567153-78567172 | None:intergenic | 30.0% |
!! | TCTGATATGTTGTTTCTGTT+AGG | + | Chr4:78568701-78568720 | MsG0480022917.01.T01:intron | 30.0% |
!! | TTGTTGATGATGATCTAACT+TGG | + | Chr4:78567046-78567065 | MsG0480022917.01.T01:CDS | 30.0% |
!!! | GATAGTTTTGGATATTCAGA+TGG | + | Chr4:78569034-78569053 | MsG0480022917.01.T01:CDS | 30.0% |
AAGAGAATTTGAAAGTCTCG+AGG | + | Chr4:78568139-78568158 | MsG0480022917.01.T01:CDS | 35.0% | |
AAGCCAACAAAAATGTGGAT+TGG | - | Chr4:78567252-78567271 | None:intergenic | 35.0% | |
AATGATCAGAAATTGTCCTC+AGG | + | Chr4:78568920-78568939 | MsG0480022917.01.T01:CDS | 35.0% | |
AGAGAATTTGAAAGTCTCGA+GGG | + | Chr4:78568140-78568159 | MsG0480022917.01.T01:CDS | 35.0% | |
ATAAGAAAGAGTTCAGAGGT+AGG | + | Chr4:78569133-78569152 | MsG0480022917.01.T01:CDS | 35.0% | |
ATCTGCTGAAGCATACAAAT+TGG | - | Chr4:78569710-78569729 | None:intergenic | 35.0% | |
CATATGCATCTTTACTTTCG+CGG | - | Chr4:78567677-78567696 | None:intergenic | 35.0% | |
CATTAGTCCTGTGAATTCAT+CGG | + | Chr4:78569387-78569406 | MsG0480022917.01.T01:CDS | 35.0% | |
CGCAATTCTTTCATCCTTAT+AGG | - | Chr4:78568077-78568096 | None:intergenic | 35.0% | |
CTAGGATGAGATGATAATAC+TGG | + | Chr4:78567364-78567383 | MsG0480022917.01.T01:intron | 35.0% | |
GAAATAACTGCAGTAGAATG+AGG | + | Chr4:78569801-78569820 | MsG0480022917.01.T01:three_prime_UTR | 35.0% | |
GATTTACCTTCAAAAGATCC+AGG | + | Chr4:78568959-78568978 | MsG0480022917.01.T01:CDS | 35.0% | |
GGACCAAGAATATTACTAGT+AGG | - | Chr4:78567873-78567892 | None:intergenic | 35.0% | |
GTAATCATTCTTGTAATCGG+AGG | - | Chr4:78569368-78569387 | None:intergenic | 35.0% | |
GTTAAAGCTGTGAATCAACT+TGG | + | Chr4:78568350-78568369 | MsG0480022917.01.T01:CDS | 35.0% | |
TAGATTTGATGAATGTTCCG+TGG | + | Chr4:78568584-78568603 | MsG0480022917.01.T01:CDS | 35.0% | |
TTACTTCTGATTCCAGAGAT+TGG | - | Chr4:78569165-78569184 | None:intergenic | 35.0% | |
TTCAAGCTTCTTGAACATGT+TGG | + | Chr4:78567738-78567757 | MsG0480022917.01.T01:CDS | 35.0% | |
TTGAGAAAGCTTAAACATCC+TGG | - | Chr4:78568980-78568999 | None:intergenic | 35.0% | |
! | AAACATCCTGGATCTTTTGA+AGG | - | Chr4:78568968-78568987 | None:intergenic | 35.0% |
! | GAGATTGATCATTTGAGATG+AGG | - | Chr4:78569450-78569469 | None:intergenic | 35.0% |
! | TACGACTCATGTGTCTTATT+TGG | + | Chr4:78567461-78567480 | MsG0480022917.01.T01:intron | 35.0% |
! | TCACCAATCCACATTTTTGT+TGG | + | Chr4:78567246-78567265 | MsG0480022917.01.T01:intron | 35.0% |
! | TGAATGCTTTATTCTACCTG+AGG | - | Chr4:78568939-78568958 | None:intergenic | 35.0% |
! | TGTCAGAGTATTATGATCCA+AGG | + | Chr4:78569665-78569684 | MsG0480022917.01.T01:CDS | 35.0% |
!! | ATCATTTGAGATGAGGCTTT+TGG | - | Chr4:78569443-78569462 | None:intergenic | 35.0% |
!! | TATTACTAGTAGGTACTGAC+TGG | - | Chr4:78567863-78567882 | None:intergenic | 35.0% |
AAATGTTGCTAGTCACTTGC+AGG | + | Chr4:78568618-78568637 | MsG0480022917.01.T01:CDS | 40.0% | |
AACTGCAGTAGAATGAGGTA+TGG | + | Chr4:78569806-78569825 | MsG0480022917.01.T01:three_prime_UTR | 40.0% | |
AAGTTCGATCTACGAGTTCT+TGG | - | Chr4:78568280-78568299 | None:intergenic | 40.0% | |
AAGTTTAAGTCCTCGTCCAA+AGG | - | Chr4:78569592-78569611 | None:intergenic | 40.0% | |
ACTAACCAATAACGCTAGCT+AGG | + | Chr4:78567346-78567365 | MsG0480022917.01.T01:intron | 40.0% | |
AGTCTTAATAGCTGCGTGAT+GGG | + | Chr4:78567495-78567514 | MsG0480022917.01.T01:intron | 40.0% | |
ATTCTTGTAATCGGAGGGAT+TGG | - | Chr4:78569362-78569381 | None:intergenic | 40.0% | |
CAAATGGATACTACAGGTCA+TGG | + | Chr4:78569070-78569089 | MsG0480022917.01.T01:CDS | 40.0% | |
CTAGAACTAGAAGGCTAGTA+GGG | + | Chr4:78568725-78568744 | MsG0480022917.01.T01:intron | 40.0% | |
CTCTATTGCTAAGCAACATG+TGG | - | Chr4:78567640-78567659 | None:intergenic | 40.0% | |
CTTCTTCCATGTGCTAAAAG+TGG | + | Chr4:78567144-78567163 | MsG0480022917.01.T01:CDS | 40.0% | |
GCTGAAGCATACAAATTGGT+AGG | - | Chr4:78569706-78569725 | None:intergenic | 40.0% | |
GGAACTTCAGCAATAAACCT+TGG | - | Chr4:78569685-78569704 | None:intergenic | 40.0% | |
TAGAACTAGAAGGCTAGTAG+GGG | + | Chr4:78568726-78568745 | MsG0480022917.01.T01:intron | 40.0% | |
TATGCAGTGATGTCTGTTGA+TGG | + | Chr4:78567993-78568012 | MsG0480022917.01.T01:intron | 40.0% | |
TGAACATGTTGGACTTGAGA+TGG | + | Chr4:78567749-78567768 | MsG0480022917.01.T01:CDS | 40.0% | |
TTCAGCAAGCAACAAAACGA+AGG | + | Chr4:78569004-78569023 | MsG0480022917.01.T01:CDS | 40.0% | |
! | AATACCGGCTATACTTGAGT+AGG | + | Chr4:78568885-78568904 | MsG0480022917.01.T01:CDS | 40.0% |
! | ACATTTTCTCTAGTCAGCCA+CGG | - | Chr4:78568604-78568623 | None:intergenic | 40.0% |
! | CACATGTTGCTTAGCAATAG+AGG | + | Chr4:78567638-78567657 | MsG0480022917.01.T01:CDS | 40.0% |
! | TAGTCTTAATAGCTGCGTGA+TGG | + | Chr4:78567494-78567513 | MsG0480022917.01.T01:intron | 40.0% |
! | TGTTGATGGAGAAACAAGCA+GGG | + | Chr4:78568007-78568026 | MsG0480022917.01.T01:CDS | 40.0% |
!! | GAAGGTGCAATCGATAGTTT+TGG | + | Chr4:78569022-78569041 | MsG0480022917.01.T01:CDS | 40.0% |
!! | GATGGTAACATGTTTGCTGT+AGG | + | Chr4:78568200-78568219 | MsG0480022917.01.T01:CDS | 40.0% |
!! | GTGATGAAAGGTGTTCAACA+TGG | + | Chr4:78568029-78568048 | MsG0480022917.01.T01:CDS | 40.0% |
!! | TCATTCCAAGAGTACTGTGT+TGG | - | Chr4:78569214-78569233 | None:intergenic | 40.0% |
AGCTAGAGTAGTTTGGTCTG+TGG | + | Chr4:78568310-78568329 | MsG0480022917.01.T01:CDS | 45.0% | |
AGCTTGAAACCATCCATGTC+AGG | - | Chr4:78567726-78567745 | None:intergenic | 45.0% | |
CCATACCAACACAGTACTCT+TGG | + | Chr4:78569206-78569225 | MsG0480022917.01.T01:CDS | 45.0% | |
CCTAGAACTAGAAGGCTAGT+AGG | + | Chr4:78568724-78568743 | MsG0480022917.01.T01:intron | 45.0% | |
CGATGTAAACATGCCTGACA+TGG | + | Chr4:78567710-78567729 | MsG0480022917.01.T01:CDS | 45.0% | |
CTCATCCTAGCTAGCGTTAT+TGG | - | Chr4:78567354-78567373 | None:intergenic | 45.0% | |
CTGTTAGGCCTAGAACTAGA+AGG | + | Chr4:78568716-78568735 | MsG0480022917.01.T01:intron | 45.0% | |
GAAACAAGCAGGGTGATGAA+AGG | + | Chr4:78568017-78568036 | MsG0480022917.01.T01:CDS | 45.0% | |
GAAGACACCGATGAATTCAC+AGG | - | Chr4:78569397-78569416 | None:intergenic | 45.0% | |
GCAACCTACTCAAGTATAGC+CGG | - | Chr4:78568892-78568911 | None:intergenic | 45.0% | |
GGATCAGATCACACTGATGA+TGG | + | Chr4:78568182-78568201 | MsG0480022917.01.T01:CDS | 45.0% | |
GGTAGGTCTTAACCAATCTC+TGG | + | Chr4:78569150-78569169 | MsG0480022917.01.T01:CDS | 45.0% | |
GTAAACATGCCTGACATGGA+TGG | + | Chr4:78567714-78567733 | MsG0480022917.01.T01:CDS | 45.0% | |
GTGTTCTGTTCTTCTTCGAG+TGG | - | Chr4:78569250-78569269 | None:intergenic | 45.0% | |
TGGTGGAGTCAAATGCTGTA+TGG | - | Chr4:78569189-78569208 | None:intergenic | 45.0% | |
! | AAAGCATCAAGGTGTGGAGA+AGG | - | Chr4:78567003-78567022 | None:intergenic | 45.0% |
! | ATGAGGCTTTTGGACTGACT+AGG | - | Chr4:78569433-78569452 | None:intergenic | 45.0% |
! | CTGTTGATGGAGAAACAAGC+AGG | + | Chr4:78568006-78568025 | MsG0480022917.01.T01:CDS | 45.0% |
! | GCTTTTGGACTGACTAGGAA+AGG | - | Chr4:78569428-78569447 | None:intergenic | 45.0% |
!! | AGAGTACTGTGTTGGTATGG+TGG | - | Chr4:78569206-78569225 | None:intergenic | 45.0% |
!! | CCAAGAGTACTGTGTTGGTA+TGG | - | Chr4:78569209-78569228 | None:intergenic | 45.0% |
!! | CCTACTAGCCTTCTAGTTCT+AGG | - | Chr4:78568727-78568746 | None:intergenic | 45.0% |
ACTGGTCCGGAAAAAAGAGC+TGG | - | Chr4:78567845-78567864 | None:intergenic | 50.0% | |
CTGGTCCGGAAAAAAGAGCT+GGG | - | Chr4:78567844-78567863 | None:intergenic | 50.0% | |
GTGAAACGAAGTTAGACGCG+CGG | + | Chr4:78569877-78569896 | MsG0480022917.01.T01:three_prime_UTR | 50.0% | |
TAAGTCCTCGTCCAAAGGTG+TGG | - | Chr4:78569587-78569606 | None:intergenic | 50.0% | |
TGAGTCAGCTTCCACACCTT+TGG | + | Chr4:78569573-78569592 | MsG0480022917.01.T01:CDS | 50.0% | |
! | CACCTTGATGCTTTTCCAGC+TGG | + | Chr4:78567009-78567028 | MsG0480022917.01.T01:CDS | 50.0% |
!! | CTAGTAGGTACTGACTGGTC+CGG | - | Chr4:78567858-78567877 | None:intergenic | 50.0% |
!! | GACCAGCTGGAAAAGCATCA+AGG | - | Chr4:78567014-78567033 | None:intergenic | 50.0% |
!! | GCTGGAAAAGCATCAAGGTG+TGG | - | Chr4:78567009-78567028 | None:intergenic | 50.0% |
!!! | CCTCTCCCAGCTCTTTTTTC+CGG | + | Chr4:78567836-78567855 | MsG0480022917.01.T01:intron | 50.0% |
ACGAGAACTCGTAGACCAGC+TGG | - | Chr4:78567027-78567046 | None:intergenic | 55.0% | |
AGCTTCCACACCTTTGGACG+AGG | + | Chr4:78569579-78569598 | MsG0480022917.01.T01:CDS | 55.0% | |
CCGGAAAAAAGAGCTGGGAG+AGG | - | Chr4:78567839-78567858 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 78566982 | 78570018 | 78566982 | ID=MsG0480022917.01;Name=MsG0480022917.01 |
Chr4 | mRNA | 78566982 | 78570018 | 78566982 | ID=MsG0480022917.01.T01;Parent=MsG0480022917.01;Name=MsG0480022917.01.T01;_AED=0.30;_eAED=0.32;_QI=0|0.75|0.8|1|1|1|5|280|549 |
Chr4 | exon | 78566982 | 78567165 | 78566982 | ID=MsG0480022917.01.T01:exon:32259;Parent=MsG0480022917.01.T01 |
Chr4 | exon | 78567634 | 78567786 | 78567634 | ID=MsG0480022917.01.T01:exon:32260;Parent=MsG0480022917.01.T01 |
Chr4 | exon | 78568000 | 78568380 | 78568000 | ID=MsG0480022917.01.T01:exon:32261;Parent=MsG0480022917.01.T01 |
Chr4 | exon | 78568563 | 78568639 | 78568563 | ID=MsG0480022917.01.T01:exon:32262;Parent=MsG0480022917.01.T01 |
Chr4 | exon | 78568884 | 78570018 | 78568884 | ID=MsG0480022917.01.T01:exon:32263;Parent=MsG0480022917.01.T01 |
Chr4 | CDS | 78566982 | 78567165 | 78566982 | ID=MsG0480022917.01.T01:cds;Parent=MsG0480022917.01.T01 |
Chr4 | CDS | 78567634 | 78567786 | 78567634 | ID=MsG0480022917.01.T01:cds;Parent=MsG0480022917.01.T01 |
Chr4 | CDS | 78568000 | 78568380 | 78568000 | ID=MsG0480022917.01.T01:cds;Parent=MsG0480022917.01.T01 |
Chr4 | CDS | 78568563 | 78568639 | 78568563 | ID=MsG0480022917.01.T01:cds;Parent=MsG0480022917.01.T01 |
Chr4 | CDS | 78568884 | 78569738 | 78568884 | ID=MsG0480022917.01.T01:cds;Parent=MsG0480022917.01.T01 |
Chr4 | three_prime_UTR | 78569739 | 78570018 | 78569739 | ID=MsG0480022917.01.T01:three_prime_utr;Parent=MsG0480022917.01.T01 |
Gene Sequence |
Protein sequence |