AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023027.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023027.01.T01 MTR_8g085220 55.427 691 123 14 49 578 90 756 0.0 604
MsG0480023027.01.T01 MTR_8g085220 54.936 699 122 15 49 578 90 764 0.0 599
MsG0480023027.01.T02 MTR_8g085220 55.427 691 123 14 49 578 90 756 0.0 604
MsG0480023027.01.T02 MTR_8g085220 54.936 699 122 15 49 578 90 764 0.0 599
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023027.01.T01 AT2G31740 32.138 697 268 19 49 575 96 757 3.11e-85 281
MsG0480023027.01.T01 AT2G31740 31.551 561 259 15 105 575 35 560 6.18e-67 228
MsG0480023027.01.T02 AT2G31740 32.138 697 268 19 49 575 96 757 3.11e-85 281
MsG0480023027.01.T02 AT2G31740 31.551 561 259 15 105 575 35 560 6.18e-67 228

Find 26 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGAAACTCTTGTAATATT+TGG 0.160585 4:-79899506 MsG0480023027.01.T01:three_prime_UTR
AGCACAACTACCTGTCTTTA+TGG 0.217196 4:-79899530 MsG0480023027.01.T01:three_prime_UTR
ATAATTCAATGATAAATATT+TGG 0.217795 4:+79899362 None:intergenic
ATCACGGCCGAATGCCCTTT+TGG 0.272632 4:+79899454 None:intergenic
AAAATCGGAGTCATCTATTC+AGG 0.346108 4:-79899666 MsG0480023027.01.T01:CDS
TCAATTTATAAACGTACATC+TGG 0.397519 4:+79899336 None:intergenic
ATAATCTTCTGACCAATCTC+AGG 0.408366 4:+79899587 None:intergenic
CATTTACATCCTCATCAAAC+TGG 0.411952 4:+79899705 None:intergenic
GCACAACTACCTGTCTTTAT+GGG 0.417115 4:-79899529 MsG0480023027.01.T01:three_prime_UTR
AAGTTCAATCACCCTGAGAT+TGG 0.450846 4:-79899599 MsG0480023027.01.T01:CDS
AGAATATTGTTTAGTTCATA+CGG 0.451443 4:-79899235 MsG0480023027.01.T01:intron
TGTAATTCTCACGTTCCAAA+AGG 0.471219 4:-79899469 MsG0480023027.01.T01:three_prime_UTR
TCACGTTCCAAAAGGGCATT+CGG 0.483851 4:-79899461 MsG0480023027.01.T01:three_prime_UTR
CTCATATAGTAGCTAAGAAA+CGG 0.495133 4:+79899256 None:intergenic
AACTACCTGTCTTTATGGGC+AGG 0.520385 4:-79899525 MsG0480023027.01.T01:three_prime_UTR
AATTCTAAACATTTATACAC+GGG 0.527790 4:+79899308 None:intergenic
AGTTTCCTGCCCATAAAGAC+AGG 0.540647 4:+79899520 None:intergenic
GTAATTCTCACGTTCCAAAA+GGG 0.567325 4:-79899468 MsG0480023027.01.T01:three_prime_UTR
TTGTAGCTTGTATAAAATCA+CGG 0.567739 4:+79899438 None:intergenic
TCAATGATAAATATTTGGCT+CGG 0.571404 4:+79899367 None:intergenic
TAATTCTAAACATTTATACA+CGG 0.594790 4:+79899307 None:intergenic
TTAGAATTAATTTCTCACAA+AGG 0.616778 4:-79899293 MsG0480023027.01.T01:three_prime_UTR
TAATCTTCTGACCAATCTCA+GGG 0.623591 4:+79899588 None:intergenic
TTACATCCTCATCAAACTGG+AGG 0.641651 4:+79899708 None:intergenic
CAAACTGGAGGCAAAACATG+TGG 0.667732 4:+79899720 None:intergenic
ATTCTAAACATTTATACACG+GGG 0.686289 4:+79899309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAATATATTAACTATT+AGG + Chr4:79902886-79902905 None:intergenic 10.0%
!! ATAATTCAATGATAAATATT+TGG + Chr4:79905932-79905951 None:intergenic 10.0%
!! GTATATTTATGTATATTTAT+TGG + Chr4:79907115-79907134 None:intergenic 10.0%
!!! AACAATTTTCAATAAAATTA+GGG - Chr4:79900418-79900437 MsG0480023027.01.T01:CDS 10.0%
!!! AAGTATTTTTAACTTTTATT+TGG - Chr4:79903625-79903644 MsG0480023027.01.T01:intron 10.0%
!!! AATATTAAGAAATTTTTAGT+TGG - Chr4:79903778-79903797 MsG0480023027.01.T01:intron 10.0%
!!! AGTATTTTTAACTTTTATTT+GGG - Chr4:79903626-79903645 MsG0480023027.01.T01:intron 10.0%
!!! TGTTTTAGATTTAAAAAAAA+TGG - Chr4:79899536-79899555 MsG0480023027.01.T01:exon 10.0%
!!! TTAACTTTTTTTATAGAAAA+AGG + Chr4:79903759-79903778 None:intergenic 10.0%
!!! TTTTTTAAATCTAAAACAAA+CGG + Chr4:79899534-79899553 None:intergenic 10.0%
!! AATCCCAAATTAAAAAAATT+TGG + Chr4:79906513-79906532 None:intergenic 15.0%
!! AATGCATAATATATATAAGT+TGG + Chr4:79906625-79906644 None:intergenic 15.0%
!! ATCCCAAATTAAAAAAATTT+GGG + Chr4:79906512-79906531 None:intergenic 15.0%
!! ATTAAAATTGTTAAAAATGG+AGG + Chr4:79901535-79901554 None:intergenic 15.0%
!! GAACTAAAAATAAATTTCAT+TGG + Chr4:79906269-79906288 None:intergenic 15.0%
!! GTATTATATGATTTAAAGAA+TGG - Chr4:79904995-79905014 MsG0480023027.01.T01:intron 15.0%
!! TAATTCTAAACATTTATACA+CGG + Chr4:79905987-79906006 None:intergenic 15.0%
!! TATATTGTTATAAGATTAAG+AGG - Chr4:79902895-79902914 MsG0480023027.01.T01:intron 15.0%
!! TCAAAAAAAAAATGAAAGAA+TGG + Chr4:79906302-79906321 None:intergenic 15.0%
!! TTAAAATTGTTAAAAATGGA+GGG + Chr4:79901534-79901553 None:intergenic 15.0%
!! TTATTACATTAAAGCTATTA+TGG - Chr4:79904926-79904945 MsG0480023027.01.T01:intron 15.0%
!!! AAAAACAAACAATTTAGAAT+TGG + Chr4:79904042-79904061 None:intergenic 15.0%
!!! AAAAATTATTTGAGATATAG+AGG + Chr4:79902940-79902959 None:intergenic 15.0%
!!! AAAATTATTTGAGATATAGA+GGG + Chr4:79902939-79902958 None:intergenic 15.0%
!!! AAAATTCTAAAAATATTCTG+TGG - Chr4:79900497-79900516 MsG0480023027.01.T01:CDS 15.0%
!!! ATTATTTTGTTTTATGTTGT+AGG - Chr4:79900001-79900020 MsG0480023027.01.T01:intron 15.0%
!!! ATTGTAGTTTTCTTAATATT+CGG + Chr4:79904609-79904628 None:intergenic 15.0%
!!! CAACAATTTTCAATAAAATT+AGG - Chr4:79900417-79900436 MsG0480023027.01.T01:CDS 15.0%
!!! CCATTTTTAACAATTTTAAT+CGG - Chr4:79901535-79901554 MsG0480023027.01.T01:intron 15.0%
!!! TATTCACTATTTTTTAGTTT+AGG - Chr4:79903416-79903435 MsG0480023027.01.T01:intron 15.0%
!!! TTATTTTGTTTTATGTTGTA+GGG - Chr4:79900002-79900021 MsG0480023027.01.T01:intron 15.0%
!!! TTTAAAACATCAACATTTTA+TGG - Chr4:79906232-79906251 MsG0480023027.01.T01:intron 15.0%
!!! TTTTAAGAAAGAAATTTTCA+AGG + Chr4:79899888-79899907 None:intergenic 15.0%
!!! TTTTATAAAAGAAAATTGAC+TGG + Chr4:79905280-79905299 None:intergenic 15.0%
!!! TTTTCTTTGTATTTCTAAAA+TGG - Chr4:79899561-79899580 MsG0480023027.01.T01:CDS 15.0%
!!! TTTTTAAATCTAAAACAAAC+GGG + Chr4:79899533-79899552 None:intergenic 15.0%
!! AATAATGAAAACTGTGAAAA+AGG + Chr4:79902263-79902282 None:intergenic 20.0%
!! AATTCTAAACATTTATACAC+GGG + Chr4:79905986-79906005 None:intergenic 20.0%
!! ACTACTTTACACATAAAATT+GGG - Chr4:79900127-79900146 MsG0480023027.01.T01:CDS 20.0%
!! AGGTATAAACAAAATATTAG+TGG - Chr4:79905193-79905212 MsG0480023027.01.T01:intron 20.0%
!! AGTTTAGTAGATATTAATGT+AGG - Chr4:79906084-79906103 MsG0480023027.01.T01:intron 20.0%
!! ATAAAATTGGGTTATGTAAT+GGG - Chr4:79900139-79900158 MsG0480023027.01.T01:CDS 20.0%
!! ATGTCATGTGAAATTTAAAA+TGG - Chr4:79903227-79903246 MsG0480023027.01.T01:intron 20.0%
!! ATTCTAAGTATTTCATCATT+TGG + Chr4:79899820-79899839 None:intergenic 20.0%
!! CCGATTAAAATTGTTAAAAA+TGG + Chr4:79901538-79901557 None:intergenic 20.0%
!! GAGGATTGTTTAAATAAAAT+AGG + Chr4:79902515-79902534 None:intergenic 20.0%
!! GATTATTGTTTCATAAACAT+GGG - Chr4:79903250-79903269 MsG0480023027.01.T01:intron 20.0%
!! GGTATAAACAAAATATTAGT+GGG - Chr4:79905194-79905213 MsG0480023027.01.T01:intron 20.0%
!! GTAGTATAAGTATTACAATA+TGG + Chr4:79900112-79900131 None:intergenic 20.0%
!! TAAATCAAAATGAGATTTAG+AGG - Chr4:79904427-79904446 MsG0480023027.01.T01:intron 20.0%
!! TAATACTATTGTATACACAT+AGG - Chr4:79900938-79900957 MsG0480023027.01.T01:intron 20.0%
!! TACTACTTTACACATAAAAT+TGG - Chr4:79900126-79900145 MsG0480023027.01.T01:CDS 20.0%
!! TATGAGTAATATATGTTGTA+TGG - Chr4:79898749-79898768 MsG0480023027.01.T01:intron 20.0%
!! TCAATTAAAGCAATTTAATG+AGG - Chr4:79903703-79903722 MsG0480023027.01.T01:intron 20.0%
!! TCATTATATCATTATTAACC+TGG + Chr4:79901749-79901768 None:intergenic 20.0%
!! TCCCAAATTAAAAAAATTTG+GGG + Chr4:79906511-79906530 None:intergenic 20.0%
!! TGAAAAACAAATTATGAACA+TGG + Chr4:79902328-79902347 None:intergenic 20.0%
!! TTAGAATTAATTTCTCACAA+AGG - Chr4:79905998-79906017 MsG0480023027.01.T01:intron 20.0%
!! TTCCTAATTTGATTATGATT+AGG + Chr4:79900221-79900240 None:intergenic 20.0%
!!! AAATTATTTGAGATATAGAG+GGG + Chr4:79902938-79902957 None:intergenic 20.0%
!!! AGAATATTGTTTAGTTCATA+CGG - Chr4:79906056-79906075 MsG0480023027.01.T01:intron 20.0%
!!! AGTAATTTACTTGTGTTATT+AGG - Chr4:79899325-79899344 MsG0480023027.01.T01:three_prime_UTR 20.0%
!!! ATGTATATCATTTTGAAACT+GGG + Chr4:79903085-79903104 None:intergenic 20.0%
!!! ATGTCATTTTCTGAAAAATA+CGG + Chr4:79898482-79898501 None:intergenic 20.0%
!!! CTAAATCTCATTTTGATTTA+AGG + Chr4:79904427-79904446 None:intergenic 20.0%
!!! TATTTAACCATCATGTATTT+TGG - Chr4:79905018-79905037 MsG0480023027.01.T01:intron 20.0%
!!! TCCCCAAATTTTTTTAATTT+GGG - Chr4:79906507-79906526 MsG0480023027.01.T01:intron 20.0%
!!! TCTGTTTTATTCTTTTGTTT+AGG + Chr4:79902017-79902036 None:intergenic 20.0%
!!! TGATGTTAATTTATTTCTAC+AGG - Chr4:79904091-79904110 MsG0480023027.01.T01:intron 20.0%
!!! TGTCATGTGAAATTTAAAAT+GGG - Chr4:79903228-79903247 MsG0480023027.01.T01:intron 20.0%
!!! TTATAGAATAGATTGATTTG+TGG - Chr4:79898549-79898568 MsG0480023027.01.T01:intron 20.0%
! AAATTTCACATGACATTCTT+CGG + Chr4:79903223-79903242 None:intergenic 25.0%
! AACAAGGAAAATCATTGTTA+TGG - Chr4:79899506-79899525 MsG0480023027.01.T01:three_prime_UTR 25.0%
! AACATGAATATGAAGAGAAA+AGG - Chr4:79901962-79901981 MsG0480023027.01.T01:intron 25.0%
! ACAAGGAAAATCATTGTTAT+GGG - Chr4:79899507-79899526 MsG0480023027.01.T01:three_prime_UTR 25.0%
! AGAATTTGAATTTGAGTGTT+TGG - Chr4:79898573-79898592 MsG0480023027.01.T01:intron 25.0%
! ATAAGACGAGAAACAAATAA+AGG + Chr4:79901032-79901051 None:intergenic 25.0%
! ATGATATGATGAGAAATATG+AGG + Chr4:79902534-79902553 None:intergenic 25.0%
! ATTCTAAACATTTATACACG+GGG + Chr4:79905985-79906004 None:intergenic 25.0%
! CAGTTAACTCAATTATTACA+GGG - Chr4:79903372-79903391 MsG0480023027.01.T01:intron 25.0%
! CAGTTTCAAAATGATATACA+TGG - Chr4:79903084-79903103 MsG0480023027.01.T01:intron 25.0%
! CATAAAATTGGGTTATGTAA+TGG - Chr4:79900138-79900157 MsG0480023027.01.T01:CDS 25.0%
! CTCCTAATCATAATCAAATT+AGG - Chr4:79900216-79900235 MsG0480023027.01.T01:CDS 25.0%
! CTTAATGAAATAACACTTTC+TGG - Chr4:79901230-79901249 MsG0480023027.01.T01:intron 25.0%
! GGATTATTGTTTCATAAACA+TGG - Chr4:79903249-79903268 MsG0480023027.01.T01:intron 25.0%
! TAAATATACGTTTACTAGAC+CGG - Chr4:79907126-79907145 MsG0480023027.01.T01:CDS 25.0%
! TAGTGGGATAATATTCATTT+GGG - Chr4:79905210-79905229 MsG0480023027.01.T01:intron 25.0%
! TCAATGATAAATATTTGGCT+CGG + Chr4:79905927-79905946 None:intergenic 25.0%
! TCAATTTATAAACGTACATC+TGG + Chr4:79905958-79905977 None:intergenic 25.0%
! TCACTAAATTAATATCCTTG+CGG + Chr4:79900964-79900983 None:intergenic 25.0%
! TCAGTTAACTCAATTATTAC+AGG - Chr4:79903371-79903390 MsG0480023027.01.T01:intron 25.0%
! TGAACATTTACCTACAAAAT+TGG - Chr4:79902738-79902757 MsG0480023027.01.T01:intron 25.0%
! TGATAGTTAATCTGTTTGAA+TGG + Chr4:79901379-79901398 None:intergenic 25.0%
! TTACTAAATCCCATTATGTT+GGG - Chr4:79904678-79904697 MsG0480023027.01.T01:CDS 25.0%
! TTAGTGGGATAATATTCATT+TGG - Chr4:79905209-79905228 MsG0480023027.01.T01:intron 25.0%
! TTATAAGATTAAGAGGAACA+AGG - Chr4:79902902-79902921 MsG0480023027.01.T01:intron 25.0%
! TTGCAATATCAACAATTACA+GGG + Chr4:79904130-79904149 None:intergenic 25.0%
! TTTACTAAATCCCATTATGT+TGG - Chr4:79904677-79904696 MsG0480023027.01.T01:CDS 25.0%
!! AAACAATTTAGAATTGGATC+TGG + Chr4:79904036-79904055 None:intergenic 25.0%
!! ACACATTACTCATCTTTTTA+TGG - Chr4:79906579-79906598 MsG0480023027.01.T01:intron 25.0%
!! ACAGTTTTCATTATTGATAG+TGG - Chr4:79902268-79902287 MsG0480023027.01.T01:intron 25.0%
!! ATATTTTCTATTGATGTTGC+AGG - Chr4:79903481-79903500 MsG0480023027.01.T01:intron 25.0%
!! CATTTCATTTTCTTACTATG+AGG - Chr4:79905337-79905356 MsG0480023027.01.T01:intron 25.0%
!! CTTCTTGAAATAAGTTTTCA+TGG - Chr4:79899376-79899395 MsG0480023027.01.T01:three_prime_UTR 25.0%
!! GAATTTTACGCATATACTAT+AGG + Chr4:79900484-79900503 None:intergenic 25.0%
!! GGATTTTATAAGATGTTTTG+TGG - Chr4:79900518-79900537 MsG0480023027.01.T01:CDS 25.0%
!! TTGTAGCTTGTATAAAATCA+CGG + Chr4:79905856-79905875 None:intergenic 25.0%
!! TTTTTCATCTTTTTATTCCC+TGG - Chr4:79902341-79902360 MsG0480023027.01.T01:intron 25.0%
!!! AAGCTGGTTCTTTTTTTATT+TGG - Chr4:79904561-79904580 MsG0480023027.01.T01:CDS 25.0%
!!! AATCAATTTTGACACTACAA+AGG + Chr4:79903313-79903332 None:intergenic 25.0%
!!! ACAAGTATGTTTTAAAGCAT+GGG + Chr4:79903859-79903878 None:intergenic 25.0%
!!! ACAATGATTTTCCTTGTTTA+TGG + Chr4:79899504-79899523 None:intergenic 25.0%
!!! ATCAATTTTGACACTACAAA+GGG + Chr4:79903312-79903331 None:intergenic 25.0%
!!! ATTTTGATTGGATAGATTAG+AGG - Chr4:79898950-79898969 MsG0480023027.01.T01:intron 25.0%
!!! CAATGATTTTCCTTGTTTAT+GGG + Chr4:79899503-79899522 None:intergenic 25.0%
!!! CATGTATATCATTTTGAAAC+TGG + Chr4:79903086-79903105 None:intergenic 25.0%
!!! CATTTTGATGAATCAGTTTT+GGG - Chr4:79904638-79904657 MsG0480023027.01.T01:CDS 25.0%
!!! GAAAATATTGATAGTGAAGT+CGG - Chr4:79902625-79902644 MsG0480023027.01.T01:CDS 25.0%
!!! GTCCCCAAATTTTTTTAATT+TGG - Chr4:79906506-79906525 MsG0480023027.01.T01:intron 25.0%
!!! GTTCTTTTTTTATTTGGAAC+TGG - Chr4:79904567-79904586 MsG0480023027.01.T01:CDS 25.0%
!!! GTTTTATTCTTTTGTTTAGG+AGG + Chr4:79902014-79902033 None:intergenic 25.0%
!!! TAAGACTTGTTGAGTATATT+GGG + Chr4:79903672-79903691 None:intergenic 25.0%
!!! TATCTTCTTTTTTGCTTTTG+CGG + Chr4:79906871-79906890 None:intergenic 25.0%
!!! TATTAGCTTTTCCTGATTTT+TGG + Chr4:79907183-79907202 None:intergenic 25.0%
!!! TATTATTGATGTTGACTCTT+CGG - Chr4:79904871-79904890 MsG0480023027.01.T01:intron 25.0%
!!! TCATTTTGATGAATCAGTTT+TGG - Chr4:79904637-79904656 MsG0480023027.01.T01:CDS 25.0%
!!! TGTCATTTTCTGAAAAATAC+GGG + Chr4:79898481-79898500 None:intergenic 25.0%
!!! TTTCATTATTGATAGTGGAA+GGG - Chr4:79902273-79902292 MsG0480023027.01.T01:intron 25.0%
!!! TTTTAATTTGGGATTGTTCA+TGG - Chr4:79906518-79906537 MsG0480023027.01.T01:intron 25.0%
!!! TTTTCATTATTGATAGTGGA+AGG - Chr4:79902272-79902291 MsG0480023027.01.T01:intron 25.0%
!!! TTTTTTATTCAGTTGTGTGT+GGG - Chr4:79899205-79899224 MsG0480023027.01.T01:intron 25.0%
!!! TTTTTTTTTTTCTGTGTCCT+AGG - Chr4:79900589-79900608 MsG0480023027.01.T01:intron 25.0%
AAAATCACATAAAAAGCAGC+TGG + Chr4:79901510-79901529 None:intergenic 30.0%
AAAGACTATAGACAAAAGAG+TGG - Chr4:79906900-79906919 MsG0480023027.01.T01:intron 30.0%
AAAGGTTAGAAAGAGAAGTT+AGG - Chr4:79901980-79901999 MsG0480023027.01.T01:intron 30.0%
AAAGTTTGTATGTCTTACCT+TGG - Chr4:79898653-79898672 MsG0480023027.01.T01:intron 30.0%
AAATATACGTTTACTAGACC+GGG - Chr4:79907127-79907146 MsG0480023027.01.T01:CDS 30.0%
AATTTACCAATATACCCCAT+CGG - Chr4:79900298-79900317 MsG0480023027.01.T01:intron 30.0%
ACATTAAAGCTATTATGGAC+TGG - Chr4:79904931-79904950 MsG0480023027.01.T01:intron 30.0%
ACCAAAACTTAGTGTATGTT+TGG - Chr4:79904233-79904252 MsG0480023027.01.T01:intron 30.0%
ACTCTTATATCAACAAACCA+GGG + Chr4:79902361-79902380 None:intergenic 30.0%
ATAATTGTAATCACACGTGT+CGG - Chr4:79898500-79898519 MsG0480023027.01.T01:intron 30.0%
ATATATGCACAGTTTCTTGA+TGG - Chr4:79901689-79901708 MsG0480023027.01.T01:intron 30.0%
ATGAAAGAATGGCAAGTTAT+CGG + Chr4:79906291-79906310 None:intergenic 30.0%
ATGCAATACACACGAAATAT+AGG - Chr4:79906748-79906767 MsG0480023027.01.T01:intron 30.0%
ATGTAATTGAAAACTCTAGC+CGG - Chr4:79898775-79898794 MsG0480023027.01.T01:intron 30.0%
ATGTCTACTTGACAGTATTT+AGG + Chr4:79906356-79906375 None:intergenic 30.0%
ATTAGTGCTCTTCACTAAAT+AGG - Chr4:79902096-79902115 MsG0480023027.01.T01:intron 30.0%
CAGGAAACTCTTGTAATATT+TGG - Chr4:79905785-79905804 MsG0480023027.01.T01:intron 30.0%
CATTTACCTACAAAATTGGT+TGG - Chr4:79902742-79902761 MsG0480023027.01.T01:intron 30.0%
CCAAAACTTAGTGTATGTTT+GGG - Chr4:79904234-79904253 MsG0480023027.01.T01:intron 30.0%
CCAATCAAAATCAAACAGAA+CGG + Chr4:79898941-79898960 None:intergenic 30.0%
CTCATATAGTAGCTAAGAAA+CGG + Chr4:79906038-79906057 None:intergenic 30.0%
CTGTAATTGTTGATATTGCA+AGG - Chr4:79904129-79904148 MsG0480023027.01.T01:intron 30.0%
CTGTCGGAAAAAAAAAATGT+AGG - Chr4:79906117-79906136 MsG0480023027.01.T01:intron 30.0%
CTTATCTAGTTATTTGAGAG+AGG + Chr4:79902965-79902984 None:intergenic 30.0%
CTTGAATGAGAATCTAAAAG+TGG + Chr4:79902486-79902505 None:intergenic 30.0%
CTTGCAATATCAACAATTAC+AGG + Chr4:79904131-79904150 None:intergenic 30.0%
GAACTTTATTAGTTGGAACT+TGG - Chr4:79898878-79898897 MsG0480023027.01.T01:intron 30.0%
GTGAAATTCAACAGAACAAT+GGG + Chr4:79901087-79901106 None:intergenic 30.0%
TAATAGAAAATAGCGTGTAC+AGG - Chr4:79903806-79903825 MsG0480023027.01.T01:intron 30.0%
TACTAAATCCCATTATGTTG+GGG - Chr4:79904679-79904698 MsG0480023027.01.T01:CDS 30.0%
TAGCAAGAGAATGAAGTTAA+AGG + Chr4:79903456-79903475 None:intergenic 30.0%
TATCAAAGCCAAATACATTC+TGG - Chr4:79906810-79906829 MsG0480023027.01.T01:intron 30.0%
TATGTTGTAGGGTTTAGATA+GGG - Chr4:79900013-79900032 MsG0480023027.01.T01:intron 30.0%
TCCTAAAATGGTGTAGAATA+TGG + Chr4:79905241-79905260 None:intergenic 30.0%
TCTGGACAATGAATTATTAC+TGG + Chr4:79904018-79904037 None:intergenic 30.0%
TGCTTCACTTCATTGTAATT+CGG - Chr4:79899154-79899173 MsG0480023027.01.T01:intron 30.0%
TGTCATTCACAGACAAAAAA+CGG - Chr4:79906971-79906990 MsG0480023027.01.T01:intron 30.0%
TGTTGTATACACTTCTAACA+AGG + Chr4:79900402-79900421 None:intergenic 30.0%
TTAATAAACCCCTTCAAGAA+AGG - Chr4:79906687-79906706 MsG0480023027.01.T01:intron 30.0%
TTAGATTCTCATTCAAGTGA+TGG - Chr4:79902489-79902508 MsG0480023027.01.T01:CDS 30.0%
TTATGTTGTAGGGTTTAGAT+AGG - Chr4:79900012-79900031 MsG0480023027.01.T01:intron 30.0%
TTCACATTAATCCTCATACA+TGG - Chr4:79903574-79903593 MsG0480023027.01.T01:CDS 30.0%
TTCTAGTCTGTGATTACTAT+CGG - Chr4:79903170-79903189 MsG0480023027.01.T01:intron 30.0%
TTTGAACACATCTCACATTT+AGG - Chr4:79901282-79901301 MsG0480023027.01.T01:intron 30.0%
! AAACCTAGCCTTCAAATTTA+TGG - Chr4:79899073-79899092 MsG0480023027.01.T01:intron 30.0%
! AAAGATTCCTCTAAAAAGTC+CGG + Chr4:79905070-79905089 None:intergenic 30.0%
! AATAGATGACTCCGATTTTA+GGG + Chr4:79905624-79905643 None:intergenic 30.0%
! ACTACTATTTGAAGTAGACT+CGG + Chr4:79904802-79904821 None:intergenic 30.0%
! ATCTTTTCTCGAAACTGTAA+AGG - Chr4:79905084-79905103 MsG0480023027.01.T01:intron 30.0%
! CATTACTCATCTTTTTATGG+TGG - Chr4:79906582-79906601 MsG0480023027.01.T01:intron 30.0%
! CTCATACATTTTAGACATAC+TGG + Chr4:79902147-79902166 None:intergenic 30.0%
! TATATCGATTGTAGTGAACT+TGG - Chr4:79898850-79898869 MsG0480023027.01.T01:intron 30.0%
! TCCATATTCTACACCATTTT+AGG - Chr4:79905237-79905256 MsG0480023027.01.T01:intron 30.0%
! TGTGTGTTCTTTCTTTTCTT+AGG - Chr4:79901921-79901940 MsG0480023027.01.T01:intron 30.0%
! TTTTCTCAAAGTTTCGACTT+GGG - Chr4:79899008-79899027 MsG0480023027.01.T01:intron 30.0%
! TTTTCTTAATATTCGGACAC+TGG + Chr4:79904602-79904621 None:intergenic 30.0%
!! AAAAGGGTGCTATGATATAA+AGG - Chr4:79904960-79904979 MsG0480023027.01.T01:intron 30.0%
!! AAAGGGTGCTATGATATAAA+GGG - Chr4:79904961-79904980 MsG0480023027.01.T01:intron 30.0%
!! AAGACTTGTTGAGTATATTG+GGG + Chr4:79903671-79903690 None:intergenic 30.0%
!! AATTTTTCAACGTGACTCAA+TGG - Chr4:79904388-79904407 MsG0480023027.01.T01:intron 30.0%
!! AGAATGTATTTGGCTTTGAT+AGG + Chr4:79906811-79906830 None:intergenic 30.0%
!! AGATATTGATTTCCCAAAGT+AGG + Chr4:79898367-79898386 None:intergenic 30.0%
!! ATCTCACATTTAGGTTTTCT+TGG - Chr4:79901291-79901310 MsG0480023027.01.T01:intron 30.0%
!! GAATGTATTTGGCTTTGATA+GGG + Chr4:79906810-79906829 None:intergenic 30.0%
!! GATTTCTCTAAAGTCGTTAT+TGG - Chr4:79898197-79898216 MsG0480023027.01.T01:intron 30.0%
!! GTAAGACTTGTTGAGTATAT+TGG + Chr4:79903673-79903692 None:intergenic 30.0%
!! TAATTTATTTCTACAGGCAG+TGG - Chr4:79904097-79904116 MsG0480023027.01.T01:intron 30.0%
!! TCAATTTTGACACTACAAAG+GGG + Chr4:79903311-79903330 None:intergenic 30.0%
!!! ACTCTGAATACTTTTGAGAT+TGG - Chr4:79900056-79900075 MsG0480023027.01.T01:intron 30.0%
!!! ATCTTCTTTTTTGCTTTTGC+GGG + Chr4:79906870-79906889 None:intergenic 30.0%
!!! CACAAGTATGTTTTAAAGCA+TGG + Chr4:79903860-79903879 None:intergenic 30.0%
!!! CAGTTTGAAGATGAGTTTTT+TGG - Chr4:79898290-79898309 MsG0480023027.01.T01:intron 30.0%
!!! CTTTTTTATTCAGTTGTGTG+TGG - Chr4:79899204-79899223 MsG0480023027.01.T01:intron 30.0%
!!! TGTAAAGGTTTTTTACACCA+TGG - Chr4:79905439-79905458 MsG0480023027.01.T01:intron 30.0%
!!! TGTTGTTATCCTTTTTCAGA+AGG - Chr4:79901409-79901428 MsG0480023027.01.T01:intron 30.0%
!!! TTTTTGAAACAGATAGAGAG+TGG - Chr4:79899435-79899454 MsG0480023027.01.T01:three_prime_UTR 30.0%
AAAAAGACGTAAATGCCCAT+CGG + Chr4:79900365-79900384 None:intergenic 35.0%
AAAAAGGCAGTATGTAAACC+AGG + Chr4:79902247-79902266 None:intergenic 35.0%
AAAAGGCAGTATGTAAACCA+GGG + Chr4:79902246-79902265 None:intergenic 35.0%
AAAATCGGAGTCATCTATTC+AGG - Chr4:79905625-79905644 MsG0480023027.01.T01:intron 35.0%
AAACAAGAGGCTTCCTAAAA+TGG + Chr4:79905253-79905272 None:intergenic 35.0%
AAACTCATCTTCAAACTGCA+TGG + Chr4:79898288-79898307 None:intergenic 35.0%
AACCCCACAATGATATGTAA+TGG + Chr4:79900823-79900842 None:intergenic 35.0%
AAGTCTCAAATTGAGCATAG+AGG + Chr4:79906202-79906221 None:intergenic 35.0%
AATATACGTTTACTAGACCG+GGG - Chr4:79907128-79907147 MsG0480023027.01.T01:CDS 35.0%
AATTACTAAAATACCCCCAG+CGG + Chr4:79899312-79899331 None:intergenic 35.0%
ACAAAAAACGGTTACTTGTG+TGG - Chr4:79906983-79907002 MsG0480023027.01.T01:intron 35.0%
ACCCATTACATATCATTGTG+GGG - Chr4:79900818-79900837 MsG0480023027.01.T01:intron 35.0%
ACCCCACAATGATATGTAAT+GGG + Chr4:79900822-79900841 None:intergenic 35.0%
ACTTCATTGTAATTCGGAAC+AGG - Chr4:79899160-79899179 MsG0480023027.01.T01:intron 35.0%
AGTTGGAACTTGGAAATGAA+TGG - Chr4:79898888-79898907 MsG0480023027.01.T01:intron 35.0%
ATAATCTTCTGACCAATCTC+AGG + Chr4:79905707-79905726 None:intergenic 35.0%
ATACACCTGTGAAGAAACAT+AGG + Chr4:79903961-79903980 None:intergenic 35.0%
ATCCTCATACATGGAAAATG+TGG - Chr4:79903583-79903602 MsG0480023027.01.T01:CDS 35.0%
ATGATGTAAAGACACACCTT+AGG + Chr4:79900855-79900874 None:intergenic 35.0%
ATTACCTCAATCTCCAAAAC+AGG + Chr4:79903985-79904004 None:intergenic 35.0%
ATTAGGAGTCCTATTGTATC+GGG + Chr4:79900204-79900223 None:intergenic 35.0%
ATTCGAAAGAGCTGCAAATT+TGG - Chr4:79902690-79902709 MsG0480023027.01.T01:CDS 35.0%
ATTGACTGGAAAGAAACAAG+AGG + Chr4:79905266-79905285 None:intergenic 35.0%
CACAACCACCATAAATTTGA+AGG + Chr4:79899084-79899103 None:intergenic 35.0%
CACTCTTATATCAACAAACC+AGG + Chr4:79902362-79902381 None:intergenic 35.0%
CAGATCACTTCTTCATTAAC+TGG - Chr4:79902574-79902593 MsG0480023027.01.T01:CDS 35.0%
CATTTACATCCTCATCAAAC+TGG + Chr4:79905589-79905608 None:intergenic 35.0%
CGAAATATCAACTCTCTAGA+AGG + Chr4:79902661-79902680 None:intergenic 35.0%
CGTGAAATTCAACAGAACAA+TGG + Chr4:79901088-79901107 None:intergenic 35.0%
CTGAGATGCACATTAATTGA+TGG + Chr4:79903131-79903150 None:intergenic 35.0%
CTTAGATTTAGACGATGAGT+TGG + Chr4:79902787-79902806 None:intergenic 35.0%
CTTCAAATTTATGGTGGTTG+TGG - Chr4:79899082-79899101 MsG0480023027.01.T01:intron 35.0%
CTTTGCAAGTTATAACCCAA+CGG - Chr4:79899276-79899295 MsG0480023027.01.T01:intron 35.0%
GAACCTAAAGAAAACGAGAA+TGG - Chr4:79901458-79901477 MsG0480023027.01.T01:intron 35.0%
GAACTGACAAAAATTTCCCA+AGG - Chr4:79900709-79900728 MsG0480023027.01.T01:intron 35.0%
GACCCATTACATATCATTGT+GGG - Chr4:79900817-79900836 MsG0480023027.01.T01:intron 35.0%
GATTAGGAGTCCTATTGTAT+CGG + Chr4:79900205-79900224 None:intergenic 35.0%
GATTGTAGTGAACTTGGAAA+GGG - Chr4:79898856-79898875 MsG0480023027.01.T01:intron 35.0%
GCATATACTATAGGATGAGT+CGG + Chr4:79900475-79900494 None:intergenic 35.0%
GCGATATTGTATTGCATGTA+TGG - Chr4:79904509-79904528 MsG0480023027.01.T01:CDS 35.0%
GGAAAGGGAACTTTATTAGT+TGG - Chr4:79898871-79898890 MsG0480023027.01.T01:intron 35.0%
GGGGTATATTGGTAAATTAC+TGG + Chr4:79900296-79900315 None:intergenic 35.0%
GGTTCTCTTGAGAATGAAAA+AGG - Chr4:79905173-79905192 MsG0480023027.01.T01:intron 35.0%
GTAATTCTCACGTTCCAAAA+GGG - Chr4:79905823-79905842 MsG0480023027.01.T01:intron 35.0%
GTATGGAGAATTGTAAAACG+TGG - Chr4:79904526-79904545 MsG0480023027.01.T01:CDS 35.0%
GTTTGTCCTACTATCATCAA+TGG + Chr4:79903053-79903072 None:intergenic 35.0%
TAAGTAGCTAGTTACATCCA+GGG + Chr4:79905394-79905413 None:intergenic 35.0%
TAATCTTCTGACCAATCTCA+GGG + Chr4:79905706-79905725 None:intergenic 35.0%
TACTTCCTATGTTTCTTCAC+AGG - Chr4:79903953-79903972 MsG0480023027.01.T01:intron 35.0%
TATCACACAGGGATTATTTC+AGG - Chr4:79903550-79903569 MsG0480023027.01.T01:intron 35.0%
TCCTACTATCATCAATGGTA+GGG + Chr4:79903048-79903067 None:intergenic 35.0%
TCGATGTCAACATGTTTGTT+AGG - Chr4:79902056-79902075 MsG0480023027.01.T01:intron 35.0%
TCTAGTCTGTGATTACTATC+GGG - Chr4:79903171-79903190 MsG0480023027.01.T01:intron 35.0%
TGACAAAAATTTCCCAAGGT+CGG - Chr4:79900713-79900732 MsG0480023027.01.T01:intron 35.0%
TGACCCATTACATATCATTG+TGG - Chr4:79900816-79900835 MsG0480023027.01.T01:intron 35.0%
TGCTTACACTTCATGAATTG+TGG - Chr4:79901642-79901661 MsG0480023027.01.T01:intron 35.0%
TGGTGTTTGTGAAATTGGTT+TGG - Chr4:79898593-79898612 MsG0480023027.01.T01:intron 35.0%
TGTAATTCTCACGTTCCAAA+AGG - Chr4:79905822-79905841 MsG0480023027.01.T01:intron 35.0%
TGTAGGTCTCAAATTGAGTT+TGG - Chr4:79906134-79906153 MsG0480023027.01.T01:intron 35.0%
TGTAGGTCTCAAATTTCTGT+CGG - Chr4:79906101-79906120 MsG0480023027.01.T01:intron 35.0%
TGTTTACTGTATGTAGAGAC+TGG - Chr4:79905491-79905510 MsG0480023027.01.T01:intron 35.0%
TTACCTCAATCTCCAAAACA+GGG + Chr4:79903984-79904003 None:intergenic 35.0%
TTAGTGATCAGAATAGCAGA+TGG - Chr4:79900977-79900996 MsG0480023027.01.T01:intron 35.0%
TTCACTCACCAGAATGTATT+TGG + Chr4:79906821-79906840 None:intergenic 35.0%
TTGTACTTATGCTTGCATCT+AGG - Chr4:79900908-79900927 MsG0480023027.01.T01:intron 35.0%
! AAACCAAGTACTCTAGAAGT+AGG + Chr4:79901882-79901901 None:intergenic 35.0%
! AAGATTCCTCTAAAAAGTCC+GGG + Chr4:79905069-79905088 None:intergenic 35.0%
! AAGGTCTCTTTGTTGTCAAT+TGG - Chr4:79905122-79905141 MsG0480023027.01.T01:intron 35.0%
! ACGATCTGCTGATAATGTAA+AGG - Chr4:79905424-79905443 MsG0480023027.01.T01:intron 35.0%
! AGTAATGTGTTTAGCTCAGT+TGG + Chr4:79906655-79906674 None:intergenic 35.0%
! CCCAAACATACACTAAGTTT+TGG + Chr4:79904237-79904256 None:intergenic 35.0%
! CGACTTTAGAGAAATCAAGT+TGG + Chr4:79898193-79898212 None:intergenic 35.0%
! CGATGTCAACATGTTTGTTA+GGG - Chr4:79902057-79902076 MsG0480023027.01.T01:intron 35.0%
! CTTTTCTCAAAGTTTCGACT+TGG - Chr4:79899007-79899026 MsG0480023027.01.T01:intron 35.0%
! GAATAGATGACTCCGATTTT+AGG + Chr4:79905625-79905644 None:intergenic 35.0%
! GAGACAAATCCTTCTGAAAA+AGG + Chr4:79901421-79901440 None:intergenic 35.0%
! GATCCATTTTGCCCTAAAAT+CGG - Chr4:79905610-79905629 MsG0480023027.01.T01:intron 35.0%
! TACTCATCTTTTTATGGTGG+TGG - Chr4:79906585-79906604 MsG0480023027.01.T01:intron 35.0%
! TAGCTAGTTCTTATCACACA+GGG - Chr4:79903539-79903558 MsG0480023027.01.T01:intron 35.0%
! TATCATAGCACCCTTTTTCT+TGG + Chr4:79904957-79904976 None:intergenic 35.0%
! TATTTGAGATATAGAGGGGA+AGG + Chr4:79902934-79902953 None:intergenic 35.0%
! TGCTCTTTTCCTTTCTTGAA+GGG + Chr4:79906699-79906718 None:intergenic 35.0%
! TTCTTTCTGAAGAAGGACAA+TGG - Chr4:79901153-79901172 MsG0480023027.01.T01:CDS 35.0%
! TTGCTCTTTTCCTTTCTTGA+AGG + Chr4:79906700-79906719 None:intergenic 35.0%
! TTTTACCTGAGATAAACCAC+TGG + Chr4:79903906-79903925 None:intergenic 35.0%
!! AACTGCCGATAGATTTTAAC+CGG - Chr4:79900326-79900345 MsG0480023027.01.T01:intron 35.0%
!! ATTATTGATAGTGGAAGGGA+AGG - Chr4:79902277-79902296 MsG0480023027.01.T01:intron 35.0%
!! CCGTTCTGTTTGATTTTGAT+TGG - Chr4:79898938-79898957 MsG0480023027.01.T01:intron 35.0%
!! GATTTTCCTTGTTTATGGGT+TGG + Chr4:79899499-79899518 None:intergenic 35.0%
!! GTGTTTGGTGTTTGTGAAAT+TGG - Chr4:79898588-79898607 MsG0480023027.01.T01:intron 35.0%
!! TAACCTACTTCTAGAGTACT+TGG - Chr4:79901876-79901895 MsG0480023027.01.T01:intron 35.0%
!! TAGAGAAATCAAGTTGGTGA+TGG + Chr4:79898187-79898206 None:intergenic 35.0%
!! TTATTGATAGTGGAAGGGAA+GGG - Chr4:79902278-79902297 MsG0480023027.01.T01:intron 35.0%
!! TTTCTGTTGTCTTGACTTGT+AGG - Chr4:79905541-79905560 MsG0480023027.01.T01:intron 35.0%
!! TTTGGTGCTGTTGTTGATAA+AGG - Chr4:79898308-79898327 MsG0480023027.01.T01:intron 35.0%
!!! ATATTCCAAGCCATTTTTCC+AGG - Chr4:79901608-79901627 MsG0480023027.01.T01:intron 35.0%
!!! ATTGGTTTGGTTGATTTTGC+AGG - Chr4:79898606-79898625 MsG0480023027.01.T01:intron 35.0%
!!! TGAAGAGAGTTTTAAAGCCT+GGG - Chr4:79898629-79898648 MsG0480023027.01.T01:intron 35.0%
!!! TTGATGAATCAGTTTTGGGA+TGG - Chr4:79904642-79904661 MsG0480023027.01.T01:CDS 35.0%
AAAGCGAAACATTGTTGACC+AGG - Chr4:79901728-79901747 MsG0480023027.01.T01:intron 40.0%
AAAGCTGTAGTCATAGGTCT+CGG - Chr4:79903923-79903942 MsG0480023027.01.T01:intron 40.0%
AAAGGCAGTATGTAAACCAG+GGG + Chr4:79902245-79902264 None:intergenic 40.0%
AACCAGTTGACTGTCTATCA+TGG - Chr4:79903511-79903530 MsG0480023027.01.T01:intron 40.0%
AAGACATACAAACTTTCCCC+AGG + Chr4:79898649-79898668 None:intergenic 40.0%
AAGGACAAACTTTCAGAGCA+AGG - Chr4:79905103-79905122 MsG0480023027.01.T01:intron 40.0%
AAGGTGGATGGATGCTTTAA+TGG - Chr4:79898327-79898346 MsG0480023027.01.T01:intron 40.0%
AAGTTCAATCACCCTGAGAT+TGG - Chr4:79905692-79905711 MsG0480023027.01.T01:intron 40.0%
AATTGAAAACTCTAGCCGGT+TGG - Chr4:79898779-79898798 MsG0480023027.01.T01:intron 40.0%
ACAAACACGAACACTGGATA+CGG - Chr4:79898439-79898458 MsG0480023027.01.T01:intron 40.0%
ACCAGAAGACTTCATAGGTA+TGG + Chr4:79899053-79899072 None:intergenic 40.0%
ACTTGGAAATGAATGGTTGC+AGG - Chr4:79898895-79898914 MsG0480023027.01.T01:intron 40.0%
ACTTGTGTGGAAAACTGTGA+AGG - Chr4:79906996-79907015 MsG0480023027.01.T01:CDS 40.0%
AGCACAACTACCTGTCTTTA+TGG - Chr4:79905761-79905780 MsG0480023027.01.T01:intron 40.0%
AGGTCTCAAATTGAGTTTGG+AGG - Chr4:79906137-79906156 MsG0480023027.01.T01:intron 40.0%
AGTTGCACAAAGCCCAAATA+GGG + Chr4:79901818-79901837 None:intergenic 40.0%
ATGGAAAATGTGGCATCAAG+TGG - Chr4:79903593-79903612 MsG0480023027.01.T01:CDS 40.0%
ATTGAAAACTCTAGCCGGTT+GGG - Chr4:79898780-79898799 MsG0480023027.01.T01:intron 40.0%
ATTTATGGTGGTTGTGGAGA+AGG - Chr4:79899088-79899107 MsG0480023027.01.T01:intron 40.0%
CAGGTAAAAGCTGTAGTCAT+AGG - Chr4:79903917-79903936 MsG0480023027.01.T01:intron 40.0%
CCACCATAAATTTGAAGGCT+AGG + Chr4:79899079-79899098 None:intergenic 40.0%
CGATTGTAGTGAACTTGGAA+AGG - Chr4:79898855-79898874 MsG0480023027.01.T01:intron 40.0%
CGTTGAGGATAAACGCTTAA+AGG - Chr4:79904166-79904185 MsG0480023027.01.T01:CDS 40.0%
CTAAGTAGCTAGTTACATCC+AGG + Chr4:79905395-79905414 None:intergenic 40.0%
CTCTAATTCAGAGGCAACTA+AGG + Chr4:79900450-79900469 None:intergenic 40.0%
CTCTGATCGATTATACTCCA+TGG - Chr4:79900672-79900691 MsG0480023027.01.T01:intron 40.0%
CTTAGTTGCCTCTGAATTAG+AGG - Chr4:79900448-79900467 MsG0480023027.01.T01:CDS 40.0%
CTTGTGTGGAAAACTGTGAA+GGG - Chr4:79906997-79907016 MsG0480023027.01.T01:CDS 40.0%
GACAACAACACCTGGAAAAA+TGG + Chr4:79901621-79901640 None:intergenic 40.0%
GAGCTGTCCAAAATACATGA+TGG + Chr4:79905028-79905047 None:intergenic 40.0%
GCACAACTACCTGTCTTTAT+GGG - Chr4:79905762-79905781 MsG0480023027.01.T01:intron 40.0%
GCTTTGTGCAACTACTTAGT+TGG - Chr4:79901825-79901844 MsG0480023027.01.T01:intron 40.0%
GGAGAAACTTCTCTTTCTCT+GGG - Chr4:79907149-79907168 MsG0480023027.01.T01:CDS 40.0%
GGGAAATCAATATCTCTCTG+AGG - Chr4:79898372-79898391 MsG0480023027.01.T01:intron 40.0%
GGTATTCCAACCCATAAACA+AGG - Chr4:79899490-79899509 MsG0480023027.01.T01:three_prime_UTR 40.0%
GGTTCCAACTGTTTAACTAG+CGG + Chr4:79901443-79901462 None:intergenic 40.0%
GGTTTACCAGAAGACTTCAT+AGG + Chr4:79899058-79899077 None:intergenic 40.0%
GTCCTACTATCATCAATGGT+AGG + Chr4:79903049-79903068 None:intergenic 40.0%
GTGGTAACAGCATATAAAGC+TGG - Chr4:79904545-79904564 MsG0480023027.01.T01:CDS 40.0%
TAGTACATGAGATTCAGCCA+AGG + Chr4:79898673-79898692 None:intergenic 40.0%
TAGTTGCACAAAGCCCAAAT+AGG + Chr4:79901819-79901838 None:intergenic 40.0%
TATGAGACCTTCTCTTCTCA+AGG - Chr4:79904207-79904226 MsG0480023027.01.T01:CDS 40.0%
TCGGAACAGGTACTATATCT+GGG - Chr4:79899173-79899192 MsG0480023027.01.T01:intron 40.0%
TGATCAGAATAGCAGATGGA+AGG - Chr4:79900981-79901000 MsG0480023027.01.T01:intron 40.0%
TGCTGTTCACACATAGTGTT+TGG - Chr4:79900260-79900279 MsG0480023027.01.T01:CDS 40.0%
TGGAAAATGTGGCATCAAGT+GGG - Chr4:79903594-79903613 MsG0480023027.01.T01:intron 40.0%
TGGTAAACCTTGAGAAGAGA+AGG + Chr4:79904217-79904236 None:intergenic 40.0%
TGTATGTTTGGGCAAGTGTT+GGG - Chr4:79904245-79904264 MsG0480023027.01.T01:intron 40.0%
TTAATATTCGGACACTGGTC+TGG + Chr4:79904597-79904616 None:intergenic 40.0%
TTACATCCTCATCAAACTGG+AGG + Chr4:79905586-79905605 None:intergenic 40.0%
TTAGGAGTCCTATTGTATCG+GGG + Chr4:79900203-79900222 None:intergenic 40.0%
TTCGGAACAGGTACTATATC+TGG - Chr4:79899172-79899191 MsG0480023027.01.T01:intron 40.0%
TTGCAGCTCTTTCGAATACA+AGG + Chr4:79902687-79902706 None:intergenic 40.0%
TTGGCTGAATCTCATGTACT+AGG - Chr4:79898672-79898691 MsG0480023027.01.T01:intron 40.0%
TTGTAGGGTTTAGATAGGGT+GGG - Chr4:79900017-79900036 MsG0480023027.01.T01:intron 40.0%
! ACTTGTTGAGTATATTGGGG+TGG + Chr4:79903668-79903687 None:intergenic 40.0%
! AGAAAAGTGTGTCTCAGAGA+CGG - Chr4:79902805-79902824 MsG0480023027.01.T01:intron 40.0%
! AGATTCCTCTAAAAAGTCCG+GGG + Chr4:79905068-79905087 None:intergenic 40.0%
! AGTTTCTTGATGGCAAGTGA+TGG - Chr4:79901699-79901718 MsG0480023027.01.T01:intron 40.0%
! ATGGCTCTTCTTTCTGAAGA+AGG - Chr4:79901146-79901165 MsG0480023027.01.T01:CDS 40.0%
! ATGTGTTTAGCTCAGTTGGT+AGG + Chr4:79906651-79906670 None:intergenic 40.0%
! CCTAGCCTTCAAATTTATGG+TGG - Chr4:79899076-79899095 MsG0480023027.01.T01:intron 40.0%
! CTGTTGTTGATAAAGGTGGA+TGG - Chr4:79898315-79898334 MsG0480023027.01.T01:intron 40.0%
! GCTCCATTCTCGTTTTCTTT+AGG + Chr4:79901464-79901483 None:intergenic 40.0%
! GCTCTTTTCCTTTCTTGAAG+GGG + Chr4:79906698-79906717 None:intergenic 40.0%
! GTAGCTAGTTCTTATCACAC+AGG - Chr4:79903538-79903557 MsG0480023027.01.T01:intron 40.0%
! GTCTCACCAACCAATTTTGT+AGG + Chr4:79902751-79902770 None:intergenic 40.0%
! GTTTCTTGATGGCAAGTGAT+GGG - Chr4:79901700-79901719 MsG0480023027.01.T01:intron 40.0%
! TGCCACATTTTCCATGTATG+AGG + Chr4:79903588-79903607 None:intergenic 40.0%
! TGGGCATTTACGTCTTTTTC+TGG - Chr4:79900366-79900385 MsG0480023027.01.T01:intron 40.0%
! TGTGTTTAGCTCAGTTGGTA+GGG + Chr4:79906650-79906669 None:intergenic 40.0%
! TTCCACTTGCAGATTTTCCA+TGG + Chr4:79900692-79900711 None:intergenic 40.0%
! TTCTGAAGAAGGACAATGGA+TGG - Chr4:79901157-79901176 MsG0480023027.01.T01:CDS 40.0%
!! AAATTGGTTGGTGAGACAGA+AGG - Chr4:79902754-79902773 MsG0480023027.01.T01:intron 40.0%
!! ATGTTGACTCTTCGGATTCA+AGG - Chr4:79904879-79904898 MsG0480023027.01.T01:intron 40.0%
!! TATGGACTGGCCAAGAAAAA+GGG - Chr4:79904944-79904963 MsG0480023027.01.T01:intron 40.0%
!! TCATGTATTTTGGACAGCTC+TGG - Chr4:79905028-79905047 MsG0480023027.01.T01:intron 40.0%
!! TTATGGACTGGCCAAGAAAA+AGG - Chr4:79904943-79904962 MsG0480023027.01.T01:intron 40.0%
!! TTTGGCTTTGATAGGGATTG+CGG + Chr4:79906803-79906822 None:intergenic 40.0%
!! TTTGTTGTCAATTGGTGTCG+CGG - Chr4:79905130-79905149 MsG0480023027.01.T01:intron 40.0%
!!! ACTCCGATTTTAGGGCAAAA+TGG + Chr4:79905616-79905635 None:intergenic 40.0%
!!! ATCTTTTTATGGTGGTGGTC+AGG - Chr4:79906590-79906609 MsG0480023027.01.T01:intron 40.0%
!!! ATGAATCAGTTTTGGGATGG+AGG - Chr4:79904645-79904664 MsG0480023027.01.T01:CDS 40.0%
!!! GAAGAGAGTTTTAAAGCCTG+GGG - Chr4:79898630-79898649 MsG0480023027.01.T01:intron 40.0%
!!! GTGAAGAGAGTTTTAAAGCC+TGG - Chr4:79898628-79898647 MsG0480023027.01.T01:intron 40.0%
!!! TATCCCTGTTTTGGAGATTG+AGG - Chr4:79903978-79903997 MsG0480023027.01.T01:intron 40.0%
!!! TCTTTTTATGGTGGTGGTCA+GGG - Chr4:79906591-79906610 MsG0480023027.01.T01:intron 40.0%
!!! TTCTTTTTTGCTTTTGCGGG+TGG + Chr4:79906867-79906886 None:intergenic 40.0%
AAAAATTTCCCAAGGTCGGC+GGG - Chr4:79900717-79900736 MsG0480023027.01.T01:intron 45.0%
AACAACGAAGCCTTCATCAG+TGG + Chr4:79900886-79900905 None:intergenic 45.0%
AACGGTAGTTAACTACCGCT+GGG - Chr4:79899294-79899313 MsG0480023027.01.T01:three_prime_UTR 45.0%
AACTACCTGTCTTTATGGGC+AGG - Chr4:79905766-79905785 MsG0480023027.01.T01:intron 45.0%
ACAACGAAGCCTTCATCAGT+GGG + Chr4:79900885-79900904 None:intergenic 45.0%
ACCATGGCTTATCCACTAAC+AGG - Chr4:79905455-79905474 MsG0480023027.01.T01:intron 45.0%
ACCTGGATCCCCAACATAAT+GGG + Chr4:79904690-79904709 None:intergenic 45.0%
ACTGACACAAACACGAACAC+TGG - Chr4:79898433-79898452 MsG0480023027.01.T01:intron 45.0%
AGCCATGATAGACAGTCAAC+TGG + Chr4:79903516-79903535 None:intergenic 45.0%
AGCGGTAGTTAACTACCGTT+GGG + Chr4:79899294-79899313 None:intergenic 45.0%
AGGAGTTAGGGTTTGGAGAA+GGG + Chr4:79898079-79898098 None:intergenic 45.0%
AGGGATTTCCAAGTGAATGC+TGG - Chr4:79907016-79907035 MsG0480023027.01.T01:CDS 45.0%
AGTTTCCTGCCCATAAAGAC+AGG + Chr4:79905774-79905793 None:intergenic 45.0%
ATAACAAGCCCCACTGATGA+AGG - Chr4:79900873-79900892 MsG0480023027.01.T01:intron 45.0%
ATCCAGGTGCATATAGCTGA+TGG - Chr4:79904702-79904721 MsG0480023027.01.T01:intron 45.0%
ATTTCCAAGTGAATGCTGGC+AGG - Chr4:79907020-79907039 MsG0480023027.01.T01:CDS 45.0%
ATTTCCTGCCAGCATTCACT+TGG + Chr4:79907027-79907046 None:intergenic 45.0%
CAAAAATTTCCCAAGGTCGG+CGG - Chr4:79900716-79900735 MsG0480023027.01.T01:intron 45.0%
CAAACTGGAGGCAAAACATG+TGG + Chr4:79905574-79905593 None:intergenic 45.0%
CAAAGCAGCTCGTCTCATAA+TGG - Chr4:79901193-79901212 MsG0480023027.01.T01:intron 45.0%
CAACACCTGGAAAAATGGCT+TGG + Chr4:79901616-79901635 None:intergenic 45.0%
CAAGAGAACCTTGTCCTTGA+TGG + Chr4:79905163-79905182 None:intergenic 45.0%
CAGCTGGTACAAGATACGAA+CGG + Chr4:79901494-79901513 None:intergenic 45.0%
CATTATGAGACGAGCTGCTT+TGG + Chr4:79901195-79901214 None:intergenic 45.0%
CCATACCAGTGGTTTATCTC+AGG - Chr4:79903898-79903917 MsG0480023027.01.T01:intron 45.0%
CCTAAGCTTGGTCCTACTTT+GGG - Chr4:79898352-79898371 MsG0480023027.01.T01:intron 45.0%
CCTGAGATAAACCACTGGTA+TGG + Chr4:79903901-79903920 None:intergenic 45.0%
CTCATCTTCAAACTGCATGG+CGG + Chr4:79898285-79898304 None:intergenic 45.0%
CTCCATGGAAAATCTGCAAG+TGG - Chr4:79900687-79900706 MsG0480023027.01.T01:intron 45.0%
GAAACTTCTCTTTCTCTGGG+AGG - Chr4:79907152-79907171 MsG0480023027.01.T01:CDS 45.0%
GAGAAAGAGAAGTTTCTCCC+CGG + Chr4:79907148-79907167 None:intergenic 45.0%
GCCATACCTATGAAGTCTTC+TGG - Chr4:79899049-79899068 MsG0480023027.01.T01:intron 45.0%
GCTTTAATGGAGCCTAAGCT+TGG - Chr4:79898340-79898359 MsG0480023027.01.T01:intron 45.0%
GGGAGAAACTTCTCTTTCTC+TGG - Chr4:79907148-79907167 MsG0480023027.01.T01:CDS 45.0%
GGGGCTGAACACTACAAAAA+TGG + Chr4:79902226-79902245 None:intergenic 45.0%
GTAAGCATGACAACAACACC+TGG + Chr4:79901629-79901648 None:intergenic 45.0%
GTATCGAGAATGTTAGACCC+TGG - Chr4:79905374-79905393 MsG0480023027.01.T01:intron 45.0%
GTATGTGTGTGTGTGTGTGT+AGG - Chr4:79899459-79899478 MsG0480023027.01.T01:three_prime_UTR 45.0%
GTCTCCGCTAGTTAAACAGT+TGG - Chr4:79901436-79901455 MsG0480023027.01.T01:intron 45.0%
GTGTATGTTTGGGCAAGTGT+TGG - Chr4:79904244-79904263 MsG0480023027.01.T01:intron 45.0%
GTGTGTGTGTAGGATATGAG+AGG - Chr4:79899469-79899488 MsG0480023027.01.T01:three_prime_UTR 45.0%
GTTGCACAAAGCCCAAATAG+GGG + Chr4:79901817-79901836 None:intergenic 45.0%
GTTGTAGGGTTTAGATAGGG+TGG - Chr4:79900016-79900035 MsG0480023027.01.T01:intron 45.0%
TAACTGCCGATGGGGTATAT+TGG + Chr4:79900307-79900326 None:intergenic 45.0%
TACCTGAATCTCATCCATGC+TGG + Chr4:79901335-79901354 None:intergenic 45.0%
TAGCACTCTCTCGAACAAAC+TGG + Chr4:79904731-79904750 None:intergenic 45.0%
TGAAGAAGGACAATGGATGG+TGG - Chr4:79901160-79901179 MsG0480023027.01.T01:CDS 45.0%
TGTGGCATCAAGTGGGAAAA+TGG - Chr4:79903601-79903620 MsG0480023027.01.T01:intron 45.0%
TTCCATCAGCTATATGCACC+TGG + Chr4:79904707-79904726 None:intergenic 45.0%
TTCTCATTTGAAGAGCCTCG+CGG + Chr4:79900625-79900644 None:intergenic 45.0%
TTGAAAACTCTAGCCGGTTG+GGG - Chr4:79898781-79898800 MsG0480023027.01.T01:intron 45.0%
TTGCACAAAGCCCAAATAGG+GGG + Chr4:79901816-79901835 None:intergenic 45.0%
TTGTATACACATAGGCCGCA+AGG - Chr4:79900946-79900965 MsG0480023027.01.T01:intron 45.0%
TTGTTGCTGATCCATACCAG+TGG - Chr4:79903887-79903906 MsG0480023027.01.T01:intron 45.0%
TTTGGAGAAGGGAGATGAGT+GGG + Chr4:79898068-79898087 None:intergenic 45.0%
! AACCTTGTCCTTGATGGCTT+GGG + Chr4:79905157-79905176 None:intergenic 45.0%
! AAGAGAAAACAGAGCACCCT+TGG + Chr4:79900762-79900781 None:intergenic 45.0%
! GAAGCACTTCAGTTTCGTTG+AGG - Chr4:79904151-79904170 MsG0480023027.01.T01:CDS 45.0%
! GGGAGGTACAACCAAAAATC+AGG - Chr4:79907169-79907188 MsG0480023027.01.T01:CDS 45.0%
! GTTTTGCCTCCAGTTTGATG+AGG - Chr4:79905577-79905596 MsG0480023027.01.T01:intron 45.0%
! TAATGGGTCAGACTGTTCCT+CGG + Chr4:79900806-79900825 None:intergenic 45.0%
! TCACAGGTGTATCCCTGTTT+TGG - Chr4:79903969-79903988 MsG0480023027.01.T01:intron 45.0%
! TGCCGCCGGTTAAAATCTAT+CGG + Chr4:79900334-79900353 None:intergenic 45.0%
! TGGGGTTTTCATTGTGCCTA+AGG - Chr4:79900836-79900855 MsG0480023027.01.T01:intron 45.0%
! TTTTCTGTGTCCTAGGCTTC+TGG - Chr4:79900596-79900615 MsG0480023027.01.T01:intron 45.0%
! TTTTTGTAGTGTTCAGCCCC+TGG - Chr4:79902226-79902245 MsG0480023027.01.T01:intron 45.0%
!! GGTGCTGTTGTTGATAAAGG+TGG - Chr4:79898311-79898330 MsG0480023027.01.T01:intron 45.0%
!! TCACGTTCCAAAAGGGCATT+CGG - Chr4:79905830-79905849 MsG0480023027.01.T01:intron 45.0%
!! TCTCAAAGTTTCGACTTGGG+TGG - Chr4:79899011-79899030 MsG0480023027.01.T01:intron 45.0%
!! TGCCGATAGATTTTAACCGG+CGG - Chr4:79900329-79900348 MsG0480023027.01.T01:intron 45.0%
!!! GTTCGAGAGAGTGCTAGTTT+TGG - Chr4:79904735-79904754 MsG0480023027.01.T01:intron 45.0%
!!! TATTTTGGACAGCTCTGGAC+TGG - Chr4:79905033-79905052 MsG0480023027.01.T01:intron 45.0%
!!! TGGCTCGGTGTTTGTTTTCT+GGG + Chr4:79905912-79905931 None:intergenic 45.0%
!!! TTGGCTCGGTGTTTGTTTTC+TGG + Chr4:79905913-79905932 None:intergenic 45.0%
!!! TTTTCTTTTATAAAAATAAT+TGG - Chr4:79905285-79905304 MsG0480023027.01.T01:intron 5.0%
ACACTACAAAGGGGCGAATG+GGG + Chr4:79903302-79903321 None:intergenic 50.0%
ACCATGACCATGCCTGTTAG+TGG + Chr4:79905470-79905489 None:intergenic 50.0%
ACGGTAGTTAACTACCGCTG+GGG - Chr4:79899295-79899314 MsG0480023027.01.T01:three_prime_UTR 50.0%
AGTCCTATTGTATCGGGGCT+TGG + Chr4:79900198-79900217 None:intergenic 50.0%
ATAACACGCCACCGCATAAG+CGG + Chr4:79898254-79898273 None:intergenic 50.0%
ATCCCAAGCCCCGATACAAT+AGG - Chr4:79900192-79900211 MsG0480023027.01.T01:CDS 50.0%
ATCGGCAGTTAACTGCCGAT+GGG + Chr4:79900335-79900316 None:intergenic 50.0%
CAACGAAGCCTTCATCAGTG+GGG + Chr4:79900884-79900903 None:intergenic 50.0%
CAACGGTAGTTAACTACCGC+TGG - Chr4:79899293-79899312 MsG0480023027.01.T01:three_prime_UTR 50.0%
CACCTGGATCCCCAACATAA+TGG + Chr4:79904691-79904710 None:intergenic 50.0%
CAGCGGTAGTTAACTACCGT+TGG + Chr4:79899295-79899314 None:intergenic 50.0%
CATCCATGCTGGCATTCGTA+TGG + Chr4:79901324-79901343 None:intergenic 50.0%
CCCAAAGTAGGACCAAGCTT+AGG + Chr4:79898355-79898374 None:intergenic 50.0%
GACACTACAAAGGGGCGAAT+GGG + Chr4:79903303-79903322 None:intergenic 50.0%
GACGGGAACGAATATTACGG+CGG + Chr4:79898232-79898251 None:intergenic 50.0%
GAGGAGTTAGGGTTTGGAGA+AGG + Chr4:79898080-79898099 None:intergenic 50.0%
GAGTCGGACCTCTAATTCAG+AGG + Chr4:79900459-79900478 None:intergenic 50.0%
GCCTAAGCTTGGTCCTACTT+TGG - Chr4:79898351-79898370 MsG0480023027.01.T01:intron 50.0%
GCGGACGGGAACGAATATTA+CGG + Chr4:79898235-79898254 None:intergenic 50.0%
GGCTTATCCACTAACAGGCA+TGG - Chr4:79905460-79905479 MsG0480023027.01.T01:intron 50.0%
GTCCTATTGTATCGGGGCTT+GGG + Chr4:79900197-79900216 None:intergenic 50.0%
GTGTCTCAGAGACGGAATGA+TGG - Chr4:79902813-79902832 MsG0480023027.01.T01:intron 50.0%
GTTTGGAGAAGGGAGATGAG+TGG + Chr4:79898069-79898088 None:intergenic 50.0%
TAGGGTTTAGATAGGGTGGG+AGG - Chr4:79900020-79900039 MsG0480023027.01.T01:intron 50.0%
TATCGGCAGTTAACTGCCGA+TGG + Chr4:79900317-79900336 None:intergenic 50.0%
TCCACTAACAGGCATGGTCA+TGG - Chr4:79905466-79905485 MsG0480023027.01.T01:intron 50.0%
TCCCATTATGTTGGGGATCC+AGG - Chr4:79904686-79904705 MsG0480023027.01.T01:intron 50.0%
TGACACTACAAAGGGGCGAA+TGG + Chr4:79903304-79903323 None:intergenic 50.0%
TGCACAAAGCCCAAATAGGG+GGG + Chr4:79901815-79901834 None:intergenic 50.0%
TGCCAGCATGGATGAGATTC+AGG - Chr4:79901330-79901349 MsG0480023027.01.T01:CDS 50.0%
! AGCAGCAGTTTTTGATGCCG+AGG - Chr4:79900786-79900805 MsG0480023027.01.T01:intron 50.0%
! AGCTGACTTTAGGTGGCCAA+GGG - Chr4:79900743-79900762 MsG0480023027.01.T01:intron 50.0%
! GAACCTTGTCCTTGATGGCT+TGG + Chr4:79905158-79905177 None:intergenic 50.0%
! GCCTGTTAGTGGATAAGCCA+TGG + Chr4:79905459-79905478 None:intergenic 50.0%
!! CGTAGAGGTGTTCGGAAAGA+CGG + Chr4:79898149-79898168 None:intergenic 50.0%
!! GTAGAGGTGTTCGGAAAGAC+GGG + Chr4:79898148-79898167 None:intergenic 50.0%
!! GTTGGTGATGGAAGTGAAGC+CGG + Chr4:79898175-79898194 None:intergenic 50.0%
AAAACTCTAGCCGGTTGGGG+TGG - Chr4:79898784-79898803 MsG0480023027.01.T01:intron 55.0%
AACCCTAACTCCTCCAGCTC+CGG - Chr4:79898086-79898105 MsG0480023027.01.T01:intron 55.0%
AAGTGAAGCCGGCATCGTAG+AGG + Chr4:79898164-79898183 None:intergenic 55.0%
ACAAAGCCCAAATAGGGGGG+AGG + Chr4:79901812-79901831 None:intergenic 55.0%
AGACAGAACACCACCCCAAC+CGG + Chr4:79898797-79898816 None:intergenic 55.0%
AGCCATTCGCGAGCACGAAT+CGG + Chr4:79901132-79901151 None:intergenic 55.0%
CAGCCATACGAATGCCAGCA+TGG - Chr4:79901318-79901337 MsG0480023027.01.T01:CDS 55.0%
CATGCTGGCATTCGTATGGC+TGG + Chr4:79901320-79901339 None:intergenic 55.0%
CGGTAGTTAACTACCGCTGG+GGG - Chr4:79899296-79899315 MsG0480023027.01.T01:three_prime_UTR 55.0%
GAGCTGGAGGAGTTAGGGTT+TGG + Chr4:79898086-79898105 None:intergenic 55.0%
GCGAGCACGAATCGGAATCT+GGG + Chr4:79901124-79901143 None:intergenic 55.0%
GCTTATGCGGTGGCGTGTTA+TGG - Chr4:79898253-79898272 MsG0480023027.01.T01:intron 55.0%
GTAGTCATAGGTCTCGGAGC+AGG - Chr4:79903929-79903948 MsG0480023027.01.T01:intron 55.0%
GTCCCAAGCCATCAAGGACA+AGG - Chr4:79905152-79905171 MsG0480023027.01.T01:intron 55.0%
TCCGAACACCTCTACGATGC+CGG - Chr4:79898153-79898172 MsG0480023027.01.T01:intron 55.0%
TCGGCAGTTAACTGCCGATG+GGG + Chr4:79900315-79900334 None:intergenic 55.0%
TTCGTTCCCGTCCGCTTATG+CGG - Chr4:79898240-79898259 MsG0480023027.01.T01:intron 55.0%
! ATCACGGCCGAATGCCCTTT+TGG + Chr4:79905840-79905859 None:intergenic 55.0%
! CAGCTGACTTTAGGTGGCCA+AGG - Chr4:79900742-79900761 MsG0480023027.01.T01:intron 55.0%
! CCTCTAAAAAGTCCGGGGCA+GGG + Chr4:79905063-79905082 None:intergenic 55.0%
! GCTTTTGCGGGTGGTGACAT+GGG + Chr4:79906858-79906877 None:intergenic 55.0%
! TCCTCTAAAAAGTCCGGGGC+AGG + Chr4:79905064-79905083 None:intergenic 55.0%
! TGCTTTTGCGGGTGGTGACA+TGG + Chr4:79906859-79906878 None:intergenic 55.0%
! TGGTGACATGGGAGTGTACG+AGG + Chr4:79906847-79906866 None:intergenic 55.0%
! TTCCGATTCGTGCTCGCGAA+TGG - Chr4:79901127-79901146 MsG0480023027.01.T01:CDS 55.0%
AAGACGGGAGTTGCCGCAAC+CGG + Chr4:79898133-79898152 None:intergenic 60.0%
AAGCCCAAATAGGGGGGAGG+AGG + Chr4:79901809-79901828 None:intergenic 60.0%
ACTCCCTCCTCCCCCCTATT+TGG - Chr4:79901802-79901821 MsG0480023027.01.T01:intron 60.0%
AGATGAGTGGGTCCCTCAGG+TGG + Chr4:79898056-79898075 None:intergenic 60.0%
AGCCCAAATAGGGGGGAGGA+GGG + Chr4:79901808-79901827 None:intergenic 60.0%
ATGAGTGGGTCCCTCAGGTG+GGG + Chr4:79898054-79898073 None:intergenic 60.0%
CATCGGCAGTTAACTGCCGC+CGG + Chr4:79900348-79900367 None:intergenic 60.0%
CGCGAGCACGAATCGGAATC+TGG + Chr4:79901125-79901144 None:intergenic 60.0%
CTCCCTCCTCCCCCCTATTT+GGG - Chr4:79901803-79901822 MsG0480023027.01.T01:intron 60.0%
GATGAGTGGGTCCCTCAGGT+GGG + Chr4:79898055-79898074 None:intergenic 60.0%
GGCGGCAGTTAACTGCCGAT+GGG - Chr4:79900347-79900366 MsG0480023027.01.T01:intron 60.0%
! CCCTGCCCCGGACTTTTTAG+AGG - Chr4:79905060-79905079 MsG0480023027.01.T01:intron 60.0%
! CGGGTGCAGCTGACTTTAGG+TGG - Chr4:79900736-79900755 MsG0480023027.01.T01:intron 60.0%
!! GCCGGCATCGTAGAGGTGTT+CGG + Chr4:79898157-79898176 None:intergenic 60.0%
ACGAGGACGGGAAGAGACGC+CGG + Chr4:79898108-79898127 None:intergenic 65.0%
ACGCCACCGCATAAGCGGAC+GGG + Chr4:79898249-79898268 None:intergenic 65.0%
ACGCCGGAGCTGGAGGAGTT+AGG + Chr4:79898092-79898111 None:intergenic 65.0%
AGACGGGAGTTGCCGCAACC+GGG + Chr4:79898132-79898151 None:intergenic 65.0%
CACGCCACCGCATAAGCGGA+CGG + Chr4:79898250-79898269 None:intergenic 65.0%
CGCCGGAGCTGGAGGAGTTA+GGG + Chr4:79898091-79898110 None:intergenic 65.0%
CGGCGGCAGTTAACTGCCGA+TGG - Chr4:79900346-79900365 MsG0480023027.01.T01:intron 65.0%
CTAGGCTTCTGGACTCCGCG+AGG - Chr4:79900607-79900626 MsG0480023027.01.T01:intron 65.0%
CTCGCGGAGTCCAGAAGCCT+AGG + Chr4:79900609-79900628 None:intergenic 65.0%
GGGAGATGAGTGGGTCCCTC+AGG + Chr4:79898059-79898078 None:intergenic 65.0%
GTCGCGGTCCCAAGCCATCA+AGG - Chr4:79905146-79905165 MsG0480023027.01.T01:intron 65.0%
GTTCCCGTCCGCTTATGCGG+TGG - Chr4:79898243-79898262 MsG0480023027.01.T01:intron 65.0%
TCTCTTCCCGTCCTCGTCCC+CGG - Chr4:79898111-79898130 MsG0480023027.01.T01:intron 65.0%
! CGGCGGGTGCAGCTGACTTT+AGG - Chr4:79900733-79900752 MsG0480023027.01.T01:intron 65.0%
ACGGGAAGAGACGCCGGAGC+TGG + Chr4:79898102-79898121 None:intergenic 70.0%
AGTTGCCGCAACCGGGGACG+AGG + Chr4:79898125-79898144 None:intergenic 70.0%
CAGCTGCACCCGCCGACCTT+GGG + Chr4:79900728-79900747 None:intergenic 70.0%
GACGGGAGTTGCCGCAACCG+GGG + Chr4:79898131-79898150 None:intergenic 70.0%
GGAAGAGACGCCGGAGCTGG+AGG + Chr4:79898099-79898118 None:intergenic 70.0%
TCAGCTGCACCCGCCGACCT+TGG + Chr4:79900729-79900748 None:intergenic 70.0%
!! TGGACTGGCATGCCCTGCCC+CGG - Chr4:79905048-79905067 MsG0480023027.01.T01:intron 70.0%
CCCGTCCTCGTCCCCGGTTG+CGG - Chr4:79898117-79898136 MsG0480023027.01.T01:intron 75.0%
CCGCAACCGGGGACGAGGAC+GGG + Chr4:79898120-79898139 None:intergenic 75.0%
GCCGCAACCGGGGACGAGGA+CGG + Chr4:79898121-79898140 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 79898047 79907266 79898047 ID=MsG0480023027.01;Name=MsG0480023027.01
Chr4 mRNA 79898047 79907266 79898047 ID=MsG0480023027.01.T01;Parent=MsG0480023027.01;Name=MsG0480023027.01.T01;_AED=0.34;_eAED=0.42;_QI=0|0.45|0.58|1|0.63|0.5|12|316|578
Chr4 exon 79898047 79898089 79898047 ID=MsG0480023027.01.T01:exon:32413;Parent=MsG0480023027.01.T01
Chr4 exon 79899280 79899750 79899280 ID=MsG0480023027.01.T01:exon:32412;Parent=MsG0480023027.01.T01
Chr4 CDS 79906984 79907266 79906984 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79906620 79906685 79906620 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79904479 79904702 79904479 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79904132 79904247 79904132 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79903564 79903612 79903564 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79902479 79902736 79902479 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79901314 79901406 79901314 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79901126 79901200 79901126 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79900413 79900605 79900413 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79900119 79900300 79900119 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 CDS 79899553 79899750 79899553 ID=MsG0480023027.01.T01:cds;Parent=MsG0480023027.01.T01
Chr4 three_prime_UTR 79899280 79899552 79899280 ID=MsG0480023027.01.T01:three_prime_utr;Parent=MsG0480023027.01.T01
Chr4 three_prime_UTR 79898047 79898089 79898047 ID=MsG0480023027.01.T01:three_prime_utr;Parent=MsG0480023027.01.T01
Chr4 mRNA 79899223 79907266 79899223 ID=MsG0480023027.01.T02;Parent=MsG0480023027.01;Name=MsG0480023027.01.T02;_AED=0.34;_eAED=0.42;_QI=0|0.4|0.54|1|0.7|0.63|11|330|578
Chr4 exon 79899223 79899750 79899223 ID=MsG0480023027.01.T02:exon:32414;Parent=MsG0480023027.01.T02
Chr4 CDS 79906984 79907266 79906984 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79906620 79906685 79906620 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79904479 79904702 79904479 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79904132 79904247 79904132 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79903564 79903612 79903564 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79902479 79902736 79902479 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79901314 79901406 79901314 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79901126 79901200 79901126 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79900413 79900605 79900413 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79900119 79900300 79900119 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 CDS 79899553 79899750 79899553 ID=MsG0480023027.01.T02:cds;Parent=MsG0480023027.01.T02
Chr4 three_prime_UTR 79899223 79899552 79899223 ID=MsG0480023027.01.T02:three_prime_utr;Parent=MsG0480023027.01.T02
Gene Sequence

>MsG0480023027.01.T01

ATGGCCCCACCTGAGGGACCCACTCATCTCCCTTCTCCAAACCCTAACTCCTCCAGCTCCGGCGTCTCTTCCCGTCCTCGTCCCCGGTTGCGGCAACTCCCGTCTTTCCGAACACCTCTACGATGCCGGCTTCACTTCCATCACCAACTTGATTTCTCTAAAGTCGTTATTGGAGACATGCTCCGCCGTAATATTCGTTCCCGTCCGCTTATGCGGTGGCGTGTTATGGATATGACCGCCATGCAGTTTGAAGATGAGTTTTTTGGTGCTGTTGTTGATAAAGGTGAAGAGAGTTTTAAAGCCTGGGGAAAGTTTGTATGTCTTACCTTGGCTGAATCTCATGTACTAGGCTTCTGGACTCCGCGAGGCTCTTCAAATGAGAATCAAGTTCGTGAAAAACTATCAAGTAGCTCTGATCGATTATACTCCATGGAAAATCTGCAAGTGGAACTGACAAAAATTTCCCAAGGTCGGCGGGTGCAGCTGACTTTAGGTGGCCAAGGGTGCTCTGTTTTCTCTTATAGAGCAGCAGTTTTTGATGCCGAGGAACAGTCTGACCCATTACATATCATTATTAAGATAGCAACGATACCCATTGTTCTGTTGAATTTCACGTCTGATGTTACATCCCAGATTCCGATTCGTGCTCGCGAATGGCTCTTCTTTCTGAAGAAGGACAATGGATGGTGTTTCTTGATGGCAAGTGATGGGATCAAAAAGCGAAACATTGTTGACCAGATCACTTCTTCATTAACTGGATCAATTATTGTTGAAGATGTAGTTTATGAAAATATTGATAGTGAAGTCGGTTGTATCTTTCCTTCTAGAGAGTTGATATTTCGACGCCTTGTATTCGAAAGAGCTGCAAATTTGGTTCAGTCTGAAGCTTTGCTAACAGTTGAACATTTACCTACAAAATTGGTTGGTGAGACAGAAGGAAGAAAACCAACTCATCGTCTAAATCTAAGAAAAGTGTGTCTCAGAGACGGAATGATGTGGTTTATCTCAGGTAAAAGCTGTAGTCATAGGTCTCGGAGCAGGTTACTTCCTATGTTTCTTCACAGGTGTATCCCTGTTTTGGAGATTGAGGCAGTGGAGTTAGACCCTGTAATTGTTGATATTGCAAGGAAGCACTTCAGTTTCGTTGAGGATAAACGCTTAAAGGTGCATATAGCTGATGGAATCCAGTTTGTTCGAGAGAGTGCTAGTTTTGGAGCAGCTCAGTCTCATAGTAAAAGTAATAATTCTAGCTATACCGAGTCTACTTCAAATAGTAGTTCAACTACTTCTCATGCAGAAGATGTAGAAGCTACAAAAGTTGATATATTATTATTGATGTTGACTCTTCGGATTCAAGAATGGTATTTAACCATCATGTATTTTGGACAGCTCTGGACTGGCATGCCCTGCCCCGGACTTTTTAGAGGAATCTTTTCTCGAAACTGTAAAGGACAAACTTTCAGAGCAAGGTCTCTTTGTTGTCAATTGGTGTCGCGGTCCCAAGCCATCAAGGACAAGGTTCTCTTGAGAATGAAAAAGGTCTTCAGCCACATGTTTTGCCTCCAGTTTGATGAGGATGTAAATGAGATCCATTTTGCCCTAAAATCGGAGTCATCTATTCAGGATCACTGCTTTTCTGAAGCTTCTCTTAAGCTTGACAAACTGTTGAAGTTCAATCACCCTGAGATTGGTCAGAAGATTATTAATGCTACAAAGCAGATCAGACGTTTGAACTGA

>MsG0480023027.01.T02

ATGGCCCCACCTGAGGGACCCACTCATCTCCCTTCTCCAAACCCTAACTCCTCCAGCTCCGGCGTCTCTTCCCGTCCTCGTCCCCGGTTGCGGCAACTCCCGTCTTTCCGAACACCTCTACGATGCCGGCTTCACTTCCATCACCAACTTGATTTCTCTAAAGTCGTTATTGGAGACATGCTCCGCCGTAATATTCGTTCCCGTCCGCTTATGCGGTGGCGTGTTATGGATATGACCGCCATGCAGTTTGAAGATGAGTTTTTTGGTGCTGTTGTTGATAAAGGTGAAGAGAGTTTTAAAGCCTGGGGAAAGTTTGTATGTCTTACCTTGGCTGAATCTCATGTACTAGGCTTCTGGACTCCGCGAGGCTCTTCAAATGAGAATCAAGTTCGTGAAAAACTATCAAGTAGCTCTGATCGATTATACTCCATGGAAAATCTGCAAGTGGAACTGACAAAAATTTCCCAAGGTCGGCGGGTGCAGCTGACTTTAGGTGGCCAAGGGTGCTCTGTTTTCTCTTATAGAGCAGCAGTTTTTGATGCCGAGGAACAGTCTGACCCATTACATATCATTATTAAGATAGCAACGATACCCATTGTTCTGTTGAATTTCACGTCTGATGTTACATCCCAGATTCCGATTCGTGCTCGCGAATGGCTCTTCTTTCTGAAGAAGGACAATGGATGGTGTTTCTTGATGGCAAGTGATGGGATCAAAAAGCGAAACATTGTTGACCAGATCACTTCTTCATTAACTGGATCAATTATTGTTGAAGATGTAGTTTATGAAAATATTGATAGTGAAGTCGGTTGTATCTTTCCTTCTAGAGAGTTGATATTTCGACGCCTTGTATTCGAAAGAGCTGCAAATTTGGTTCAGTCTGAAGCTTTGCTAACAGTTGAACATTTACCTACAAAATTGGTTGGTGAGACAGAAGGAAGAAAACCAACTCATCGTCTAAATCTAAGAAAAGTGTGTCTCAGAGACGGAATGATGTGGTTTATCTCAGGTAAAAGCTGTAGTCATAGGTCTCGGAGCAGGTTACTTCCTATGTTTCTTCACAGGTGTATCCCTGTTTTGGAGATTGAGGCAGTGGAGTTAGACCCTGTAATTGTTGATATTGCAAGGAAGCACTTCAGTTTCGTTGAGGATAAACGCTTAAAGGTGCATATAGCTGATGGAATCCAGTTTGTTCGAGAGAGTGCTAGTTTTGGAGCAGCTCAGTCTCATAGTAAAAGTAATAATTCTAGCTATACCGAGTCTACTTCAAATAGTAGTTCAACTACTTCTCATGCAGAAGATGTAGAAGCTACAAAAGTTGATATATTATTATTGATGTTGACTCTTCGGATTCAAGAATGGTATTTAACCATCATGTATTTTGGACAGCTCTGGACTGGCATGCCCTGCCCCGGACTTTTTAGAGGAATCTTTTCTCGAAACTGTAAAGGACAAACTTTCAGAGCAAGGTCTCTTTGTTGTCAATTGGTGTCGCGGTCCCAAGCCATCAAGGACAAGGTTCTCTTGAGAATGAAAAAGGTCTTCAGCCACATGTTTTGCCTCCAGTTTGATGAGGATGTAAATGAGATCCATTTTGCCCTAAAATCGGAGTCATCTATTCAGGATCACTGCTTTTCTGAAGCTTCTCTTAAGCTTGACAAACTGTTGAAGTTCAATCACCCTGAGATTGGTCAGAAGATTATTAATGCTACAAAGCAGATCAGACGTTTGAACTGA
Protein sequence

>MsG0480023027.01.T01

MAPPEGPTHLPSPNPNSSSSGVSSRPRPRLRQLPSFRTPLRCRLHFHHQLDFSKVVIGDMLRRNIRSRPLMRWRVMDMTAMQFEDEFFGAVVDKGEESFKAWGKFVCLTLAESHVLGFWTPRGSSNENQVREKLSSSSDRLYSMENLQVELTKISQGRRVQLTLGGQGCSVFSYRAAVFDAEEQSDPLHIIIKIATIPIVLLNFTSDVTSQIPIRAREWLFFLKKDNGWCFLMASDGIKKRNIVDQITSSLTGSIIVEDVVYENIDSEVGCIFPSRELIFRRLVFERAANLVQSEALLTVEHLPTKLVGETEGRKPTHRLNLRKVCLRDGMMWFISGKSCSHRSRSRLLPMFLHRCIPVLEIEAVELDPVIVDIARKHFSFVEDKRLKVHIADGIQFVRESASFGAAQSHSKSNNSSYTESTSNSSSTTSHAEDVEATKVDILLLMLTLRIQEWYLTIMYFGQLWTGMPCPGLFRGIFSRNCKGQTFRARSLCCQLVSRSQAIKDKVLLRMKKVFSHMFCLQFDEDVNEIHFALKSESSIQDHCFSEASLKLDKLLKFNHPEIGQKIINATKQIRRLN*

>MsG0480023027.01.T02

MAPPEGPTHLPSPNPNSSSSGVSSRPRPRLRQLPSFRTPLRCRLHFHHQLDFSKVVIGDMLRRNIRSRPLMRWRVMDMTAMQFEDEFFGAVVDKGEESFKAWGKFVCLTLAESHVLGFWTPRGSSNENQVREKLSSSSDRLYSMENLQVELTKISQGRRVQLTLGGQGCSVFSYRAAVFDAEEQSDPLHIIIKIATIPIVLLNFTSDVTSQIPIRAREWLFFLKKDNGWCFLMASDGIKKRNIVDQITSSLTGSIIVEDVVYENIDSEVGCIFPSRELIFRRLVFERAANLVQSEALLTVEHLPTKLVGETEGRKPTHRLNLRKVCLRDGMMWFISGKSCSHRSRSRLLPMFLHRCIPVLEIEAVELDPVIVDIARKHFSFVEDKRLKVHIADGIQFVRESASFGAAQSHSKSNNSSYTESTSNSSSTTSHAEDVEATKVDILLLMLTLRIQEWYLTIMYFGQLWTGMPCPGLFRGIFSRNCKGQTFRARSLCCQLVSRSQAIKDKVLLRMKKVFSHMFCLQFDEDVNEIHFALKSESSIQDHCFSEASLKLDKLLKFNHPEIGQKIINATKQIRRLN*