AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023294.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023294.01.T01 MTR_8g089990 99.507 203 1 0 1 203 1 203 5.93e-149 412
MsG0480023294.01.T01 MTR_4g094260 78.313 166 30 3 22 186 5 165 3.14e-89 261
MsG0480023294.01.T01 MTR_1g073000 69.730 185 48 4 1 177 1 185 3.48e-87 255
MsG0480023294.01.T01 MTR_1g069140 54.362 149 54 3 51 192 124 265 8.05e-42 143
MsG0480023294.01.T01 MTR_1g069140 54.422 147 57 3 51 192 133 274 8.93e-42 143
MsG0480023294.01.T01 MTR_1g049070 66.667 93 31 0 83 175 24 116 7.41e-40 134
MsG0480023294.01.T01 MTR_3g028140 33.735 166 94 6 37 188 454 617 7.24e-17 78.6
MsG0480023294.01.T01 MTR_3g028140 36.154 130 74 4 37 158 454 582 3.97e-14 70.9
MsG0480023294.01.T01 MTR_8g037000 42.169 83 47 1 83 164 633 715 1.33e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023294.01.T01 AT5G10350 78.922 204 38 2 1 201 1 202 1.82e-114 325
MsG0480023294.01.T01 AT5G10350 78.641 206 39 2 1 203 1 204 3.31e-114 325
MsG0480023294.01.T01 AT5G65260 77.404 208 41 2 1 203 1 207 9.63e-113 321
MsG0480023294.01.T01 AT5G51120 67.284 162 50 2 36 195 52 212 4.77e-74 223
MsG0480023294.01.T01 AT5G51120 54.271 199 52 2 36 195 52 250 9.06e-66 204
MsG0480023294.01.T01 AT5G51120 70.732 123 34 1 76 196 6 128 1.88e-57 178
MsG0480023294.01.T01 AT5G10350 84.146 82 13 0 122 203 2 83 8.07e-44 142
MsG0480023294.01.T01 AT5G10350 84.146 82 13 0 122 203 2 83 8.07e-44 142
MsG0480023294.01.T01 AT5G10350 84.146 82 13 0 122 203 2 83 8.07e-44 142
MsG0480023294.01.T01 AT5G10350 84.146 82 13 0 122 203 2 83 8.07e-44 142
MsG0480023294.01.T01 AT3G12640 33.333 102 67 1 60 160 452 553 9.85e-11 60.8

Find 73 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTACTCCCCTTATGGATA+TGG 0.236806 4:+83430884 MsG0480023294.01.T01:CDS
ATGCTATTGCGATGTGAATT+AGG 0.243334 4:-83425776 None:intergenic
CCTTACATGTACTCCCCTTA+TGG 0.286031 4:+83430878 MsG0480023294.01.T01:CDS
TGTTGAAACTGAAGCTGTTC+AGG 0.288259 4:+83430609 MsG0480023294.01.T01:CDS
CCTTCCATCTCAGCCACGTC+TGG 0.288464 4:-83425864 None:intergenic
GCTAAGGTCGAGAAGGAAAT+TGG 0.324391 4:+83426002 MsG0480023294.01.T01:CDS
GAAGAAGAGCATGAGGTTTA+CGG 0.370305 4:+83425831 MsG0480023294.01.T01:CDS
GGACGATATTGTTTCATTCC+AGG 0.377330 4:-83430803 None:intergenic
CCTAAGAGGACCAATGTTCC+TGG 0.382849 4:+83430785 MsG0480023294.01.T01:CDS
GCAATTCAGATTCAGATAAC+AGG 0.397844 4:-83430639 None:intergenic
CTTACATGGCATATGGCTTC+AGG 0.398490 4:+83430840 MsG0480023294.01.T01:CDS
AGTCATGTGGTACAGTGAAC+AGG 0.398603 4:+83430530 MsG0480023294.01.T01:CDS
ATTCACATCGCAATAGCATT+TGG 0.399599 4:+83425780 MsG0480023294.01.T01:five_prime_UTR
TCCACATAAGCAAAACCTTT+AGG 0.401589 4:-83430583 None:intergenic
TTCAATCCTTACATGGCATA+TGG 0.408319 4:+83430833 MsG0480023294.01.T01:CDS
CCATAAGGGGAGTACATGTA+AGG 0.425661 4:-83430878 None:intergenic
TGCTTCTGTAGCTGCTTCTC+AGG 0.427087 4:+83426449 MsG0480023294.01.T01:CDS
CCAGGAACATTGGTCCTCTT+AGG 0.432535 4:-83430785 None:intergenic
AAGGAAATTGGCTCCGTTCA+AGG 0.432850 4:+83426014 MsG0480023294.01.T01:CDS
GTTTCCAGGTTCTGCCTAAG+AGG 0.441058 4:+83430771 MsG0480023294.01.T01:intron
TGAGATGAGGCGCCGCTTGA+AGG 0.443239 4:+83425941 MsG0480023294.01.T01:CDS
CTTCTTCCATTTCCTTCAAG+CGG 0.444637 4:-83425953 None:intergenic
AAGTGTTGCTGCACTTCCTC+TGG 0.447138 4:-83430505 None:intergenic
GAGGCGCCGCTTGAAGGAAA+TGG 0.451064 4:+83425947 MsG0480023294.01.T01:CDS
ACTATCCTGACAGACAAGTT+TGG 0.451284 4:+83430556 MsG0480023294.01.T01:CDS
CTGAAGCCATATGCCATGTA+AGG 0.472571 4:-83430839 None:intergenic
GACAAGTTTGGTCAGCCTAA+AGG 0.475002 4:+83430568 MsG0480023294.01.T01:CDS
AATCCCAGACGTGGCTGAGA+TGG 0.477332 4:+83425860 MsG0480023294.01.T01:CDS
CGATGAAGCCGGTGGTATGA+AGG 0.484886 4:+83425911 MsG0480023294.01.T01:CDS
GCTGACCAAACTTGTCTGTC+AGG 0.485268 4:-83430561 None:intergenic
GAATGAAACAATATCGTCCT+AGG 0.485505 4:+83430807 MsG0480023294.01.T01:CDS
CGCAATAGCATTTGGTTGCG+TGG 0.496769 4:+83425788 MsG0480023294.01.T01:five_prime_UTR
TGTACTCCCCTTATGGATAT+GGG 0.497226 4:+83430885 MsG0480023294.01.T01:CDS
TTGCGTACCCATATCCATAA+GGG 0.499244 4:-83430892 None:intergenic
GTTGCGTACCCATATCCATA+AGG 0.507988 4:-83430893 None:intergenic
TGAGAAGCAGCTACAGAAGC+AGG 0.509186 4:-83426447 None:intergenic
CGTGGAATCGAAAGGAAAGA+TGG 0.515969 4:+83425806 MsG0480023294.01.T01:exon
ACCGGCTTCATCGTCGGCGG+CGG 0.522837 4:-83425901 None:intergenic
CTTCCATCTCAGCCACGTCT+GGG 0.525363 4:-83425863 None:intergenic
ATCGAGCTCCTTCATACCAC+CGG 0.547125 4:-83425919 None:intergenic
ATCATTATGAAAACCTTGAA+CGG 0.558489 4:-83426027 None:intergenic
AGCTGCTTCTCAGGAAAACA+AGG 0.560487 4:+83426458 MsG0480023294.01.T01:CDS
TTGTTTCATTCCAGGAACAT+TGG 0.561559 4:-83430795 None:intergenic
CATAAGGGGAGTACATGTAA+GGG 0.562096 4:-83430877 None:intergenic
GATGGATGAAGAAGAGCATG+AGG 0.564377 4:+83425824 MsG0480023294.01.T01:exon
TCCGCCGCCGACGATGAAGC+CGG 0.571081 4:+83425900 MsG0480023294.01.T01:CDS
CATACCACCGGCTTCATCGT+CGG 0.574346 4:-83425907 None:intergenic
TTTGGTTGCGTGGAATCGAA+AGG 0.575953 4:+83425798 MsG0480023294.01.T01:five_prime_UTR
TTCTCAGGAAAACAAGGAGG+AGG 0.576078 4:+83426464 MsG0480023294.01.T01:CDS
AGCATACAGAAATTTAAATG+AGG 0.586425 4:-83430919 None:intergenic
CCAGACGTGGCTGAGATGGA+AGG 0.591120 4:+83425864 MsG0480023294.01.T01:CDS
AGCATGCATTTCACGAAGAG+CGG 0.591158 4:-83425982 None:intergenic
TCTTCGTGAAATGCATGCTA+AGG 0.591257 4:+83425986 MsG0480023294.01.T01:CDS
TAGGCGATTCAATCCTTACA+TGG 0.592543 4:+83430826 MsG0480023294.01.T01:CDS
ATGCATTTCACGAAGAGCGG+CGG 0.600008 4:-83425979 None:intergenic
ACAAGGAGGAGGCAGATGCT+AGG 0.602973 4:+83426475 MsG0480023294.01.T01:CDS
TTATCTGAATCTGAATTGCA+TGG 0.610170 4:+83430643 MsG0480023294.01.T01:CDS
TGAAGGAGCTCGATGAGATG+AGG 0.616758 4:+83425928 MsG0480023294.01.T01:CDS
GTCATGTGGTACAGTGAACA+GGG 0.623456 4:+83430531 MsG0480023294.01.T01:CDS
ATGTAAGGATTGAATCGCCT+AGG 0.636374 4:-83430824 None:intergenic
CAGCAACACTTTCAGTCATG+TGG 0.638722 4:+83430517 MsG0480023294.01.T01:CDS
AATGCATGCTAAGGTCGAGA+AGG 0.646081 4:+83425995 MsG0480023294.01.T01:CDS
CGGAGGAGAAATCCCAGACG+TGG 0.649618 4:+83425851 MsG0480023294.01.T01:CDS
TGAAACTGAAGCTGTTCAGG+AGG 0.649806 4:+83430612 MsG0480023294.01.T01:CDS
TGCGTACCCATATCCATAAG+GGG 0.658223 4:-83430891 None:intergenic
GCCGCCGACGATGAAGCCGG+TGG 0.660392 4:+83425903 MsG0480023294.01.T01:CDS
ATAAGGGGAGTACATGTAAG+GGG 0.666152 4:-83430876 None:intergenic
ACCACCGGCTTCATCGTCGG+CGG 0.666758 4:-83425904 None:intergenic
TGATTATGCATGCACACCAG+AGG 0.670537 4:+83430489 MsG0480023294.01.T01:CDS
GAAGAGCATGAGGTTTACGG+AGG 0.680084 4:+83425834 MsG0480023294.01.T01:CDS
ACATGGCATATGGCTTCAGG+AGG 0.690213 4:+83430843 MsG0480023294.01.T01:CDS
TGCTTCTCAGGAAAACAAGG+AGG 0.704124 4:+83426461 MsG0480023294.01.T01:CDS
TAAGGGGAGTACATGTAAGG+GGG 0.709420 4:-83430875 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAAAAATTAAAATCAAA+AGG + Chr4:83426726-83426745 MsG0480023294.01.T01:intron 10.0%
!! TCAAAAAATTAAAATCAAAA+GGG + Chr4:83426727-83426746 MsG0480023294.01.T01:intron 10.0%
!!! ATTTTAATTTTTTGATTATG+AGG - Chr4:83426722-83426741 None:intergenic 10.0%
!!! TTTTTTTATTGTTTTTCAAT+CGG + Chr4:83426538-83426557 MsG0480023294.01.T01:intron 10.0%
!! ACAATTATTAATTGTAAGTT+TGG + Chr4:83428033-83428052 MsG0480023294.01.T01:intron 15.0%
!! ATATAAATACAACAGATATT+GGG - Chr4:83426983-83427002 None:intergenic 15.0%
!!! CATTTATGATCTTTTTAATA+CGG - Chr4:83430164-83430183 None:intergenic 15.0%
!!! TATATTTTGCATTTTTCAAA+AGG + Chr4:83430211-83430230 MsG0480023294.01.T01:intron 15.0%
!!! TGTCTTTAAAGTTTAAATTA+AGG - Chr4:83428010-83428029 None:intergenic 15.0%
!!! TTGTAAGATATTTTAGAAAT+GGG - Chr4:83429624-83429643 None:intergenic 15.0%
!!! TTTGTAAGATATTTTAGAAA+TGG - Chr4:83429625-83429644 None:intergenic 15.0%
!!! TTTTGTATGATAAATGAATT+GGG + Chr4:83430388-83430407 MsG0480023294.01.T01:intron 15.0%
!!! TTTTGTTGTTATTAAATTGT+GGG - Chr4:83427625-83427644 None:intergenic 15.0%
!!! TTTTTGTATGATAAATGAAT+TGG + Chr4:83430387-83430406 MsG0480023294.01.T01:intron 15.0%
!! AAAAACATACTTTCAATTGA+CGG - Chr4:83430669-83430688 None:intergenic 20.0%
!! AAAAATTAAAATCAAAAGGG+CGG + Chr4:83426730-83426749 MsG0480023294.01.T01:intron 20.0%
!! AAAGAAATGAGAAAAGAAAA+AGG + Chr4:83429253-83429272 MsG0480023294.01.T01:intron 20.0%
!! AAATTGTACAAAGTTTATGA+AGG - Chr4:83429713-83429732 None:intergenic 20.0%
!! AGAAAGAACATTGAATAAAT+GGG - Chr4:83427828-83427847 None:intergenic 20.0%
!! ATACGCTATTTATTACAAAA+TGG - Chr4:83427358-83427377 None:intergenic 20.0%
!! ATTAATCGAAAGATAGTATT+AGG + Chr4:83427594-83427613 MsG0480023294.01.T01:intron 20.0%
!! CAAGAAAAAAAAGTAAAAGT+AGG + Chr4:83427735-83427754 MsG0480023294.01.T01:intron 20.0%
!! CTAGCTTCAAAATTATATTT+CGG + Chr4:83426342-83426361 MsG0480023294.01.T01:intron 20.0%
!! GATATAAATACAACAGATAT+TGG - Chr4:83426984-83427003 None:intergenic 20.0%
!! TCATAAACTTTGTACAATTT+AGG + Chr4:83429713-83429732 MsG0480023294.01.T01:intron 20.0%
!! TTTAATAACAACAAAAGTCA+CGG + Chr4:83427629-83427648 MsG0480023294.01.T01:intron 20.0%
!!! AAACATTTCAGTTTTATTGA+TGG + Chr4:83426221-83426240 MsG0480023294.01.T01:intron 20.0%
!!! AAACTGCTTTCTTTTAATAA+TGG + Chr4:83427199-83427218 MsG0480023294.01.T01:intron 20.0%
!!! AAATCTGATTTGAGAAAAAA+AGG - Chr4:83428786-83428805 None:intergenic 20.0%
!!! ATATTTTAGAAATGGGAAAA+AGG - Chr4:83429617-83429636 None:intergenic 20.0%
!!! ATGAATTTTACAGTTCAAAA+TGG + Chr4:83430055-83430074 MsG0480023294.01.T01:intron 20.0%
!!! ATGTTAACATTGTATTTTAC+GGG + Chr4:83428997-83429016 MsG0480023294.01.T01:intron 20.0%
!!! ATTTGTAGTTTTTGATGATA+CGG + Chr4:83430741-83430760 MsG0480023294.01.T01:intron 20.0%
!!! CTCTTTTTAACATTTTGATT+GGG + Chr4:83426410-83426429 MsG0480023294.01.T01:intron 20.0%
!!! CTTTTGTTGTTATTAAATTG+TGG - Chr4:83427626-83427645 None:intergenic 20.0%
!!! GAAAAATAAAGAACATTTTG+AGG + Chr4:83429275-83429294 MsG0480023294.01.T01:intron 20.0%
!!! GATGTTAACATTGTATTTTA+CGG + Chr4:83428996-83429015 MsG0480023294.01.T01:intron 20.0%
!!! TCTCTTTTTAACATTTTGAT+TGG + Chr4:83426409-83426428 MsG0480023294.01.T01:intron 20.0%
!!! TGAATTTTACAGTTCAAAAT+GGG + Chr4:83430056-83430075 MsG0480023294.01.T01:intron 20.0%
!!! TTTACTTTTTTTTCTTGCTA+AGG - Chr4:83427732-83427751 None:intergenic 20.0%
!!! TTTGTTTTTTGTTTTCAGAT+AGG - Chr4:83427775-83427794 None:intergenic 20.0%
!!! TTTTAATAGTAGTGTGATTA+TGG + Chr4:83430356-83430375 MsG0480023294.01.T01:intron 20.0%
! AAATCGATGAAATAGATAGT+AGG + Chr4:83426838-83426857 MsG0480023294.01.T01:intron 25.0%
! AAGTAAAAACAAGAAAGTCA+AGG + Chr4:83428072-83428091 MsG0480023294.01.T01:intron 25.0%
! AATTATGAGATAAAGACCAA+AGG - Chr4:83429542-83429561 None:intergenic 25.0%
! AATTTGTATACAACGGATAT+TGG - Chr4:83426955-83426974 None:intergenic 25.0%
! AGACAGAACATTGAATAAAT+GGG - Chr4:83427160-83427179 None:intergenic 25.0%
! ATCATTATGAAAACCTTGAA+CGG - Chr4:83426030-83426049 None:intergenic 25.0%
! ATTATGAGATAAAGACCAAA+GGG - Chr4:83429541-83429560 None:intergenic 25.0%
! ATTTGTATACAACGGATATT+GGG - Chr4:83426954-83426973 None:intergenic 25.0%
! CAGAAAGAACATTGAATAAA+TGG - Chr4:83427829-83427848 None:intergenic 25.0%
! GAATAGATAATGAAATCAGT+TGG - Chr4:83429679-83429698 None:intergenic 25.0%
! GGTGAAAAATTTGTATACAA+CGG - Chr4:83426962-83426981 None:intergenic 25.0%
! TAGTTCGTAATAACTAAATC+AGG - Chr4:83426660-83426679 None:intergenic 25.0%
! TATATATATACTGCAGTATG+CGG + Chr4:83427526-83427545 MsG0480023294.01.T01:intron 25.0%
! TATTTACCTAATCAACGTAA+AGG + Chr4:83426628-83426647 MsG0480023294.01.T01:intron 25.0%
! TGTTGTTATGAAATTTAGTG+AGG + Chr4:83429072-83429091 MsG0480023294.01.T01:intron 25.0%
! TTCATATCCAACTAAACAAT+AGG - Chr4:83426598-83426617 None:intergenic 25.0%
! TTGTAATAAATAGCGTATCA+CGG + Chr4:83427360-83427379 MsG0480023294.01.T01:intron 25.0%
!! GATTCGAGTTAATTCAATTA+AGG - Chr4:83426110-83426129 None:intergenic 25.0%
!! TATAGGCAAACTTCTTTTTA+TGG + Chr4:83429899-83429918 MsG0480023294.01.T01:intron 25.0%
!! TCAAATCAGATTTGTTTCAA+TGG + Chr4:83428793-83428812 MsG0480023294.01.T01:intron 25.0%
!! TGTTTTCACGTTTATGAATT+AGG + Chr4:83429561-83429580 MsG0480023294.01.T01:intron 25.0%
!!! AAAATTGTTTTTACAACAGC+AGG + Chr4:83429642-83429661 MsG0480023294.01.T01:intron 25.0%
!!! ACTGTACAGTTTTTTTTGTT+TGG + Chr4:83428878-83428897 MsG0480023294.01.T01:intron 25.0%
!!! CGAAATATAATTTTGAAGCT+AGG - Chr4:83426344-83426363 None:intergenic 25.0%
!!! TTCCTGATATTTTTTTGTTG+AGG + Chr4:83429585-83429604 MsG0480023294.01.T01:intron 25.0%
AAATAGTAGTATGTGTGAGA+AGG + Chr4:83429821-83429840 MsG0480023294.01.T01:intron 30.0%
AACATGTTCACCTATAGATA+CGG - Chr4:83427802-83427821 None:intergenic 30.0%
AACTGACGATATAGATGATA+TGG + Chr4:83430238-83430257 MsG0480023294.01.T01:intron 30.0%
AATCATGGATCACAAAAAAG+TGG + Chr4:83427278-83427297 MsG0480023294.01.T01:intron 30.0%
ACCAGAATAGAATAATTACG+TGG - Chr4:83428517-83428536 None:intergenic 30.0%
ACGAACTAATTTAGTAGTCT+TGG + Chr4:83426672-83426691 MsG0480023294.01.T01:intron 30.0%
AGAAAGTCAAGGATCATAAA+AGG + Chr4:83428083-83428102 MsG0480023294.01.T01:intron 30.0%
AGCCTCAACAAAAAAATATC+AGG - Chr4:83429590-83429609 None:intergenic 30.0%
AGGGAAAAATGGCTAAATAA+TGG - Chr4:83427114-83427133 None:intergenic 30.0%
ATGAAATAGATAGTAGGCAA+TGG + Chr4:83426844-83426863 MsG0480023294.01.T01:intron 30.0%
CAGACAGAACATTGAATAAA+TGG - Chr4:83427161-83427180 None:intergenic 30.0%
CATGCTTGCTTATAGATAAA+TGG - Chr4:83428202-83428221 None:intergenic 30.0%
CATTTATCTATAAGCAAGCA+TGG + Chr4:83428200-83428219 MsG0480023294.01.T01:intron 30.0%
CATTTGTAACTATTCATGGT+GGG + Chr4:83428711-83428730 MsG0480023294.01.T01:intron 30.0%
CGATTAATAATTATGAGTGC+AGG - Chr4:83427582-83427601 None:intergenic 30.0%
GAAAGTCAAGGATCATAAAA+GGG + Chr4:83428084-83428103 MsG0480023294.01.T01:intron 30.0%
GTTCTAATGTTTGAAGAGTT+GGG + Chr4:83429986-83430005 MsG0480023294.01.T01:intron 30.0%
TACATACATGTAGAGTGATT+AGG - Chr4:83426783-83426802 None:intergenic 30.0%
TAGAATAATTACGTGGAACA+AGG - Chr4:83428510-83428529 None:intergenic 30.0%
TCATGGCTAATTTAAACTCA+AGG - Chr4:83430708-83430727 None:intergenic 30.0%
TCCACGTAATTATTCTATTC+TGG + Chr4:83428513-83428532 MsG0480023294.01.T01:intron 30.0%
TGAAGACACATGAATTTCAA+GGG - Chr4:83430466-83430485 None:intergenic 30.0%
TGTTCTAATGTTTGAAGAGT+TGG + Chr4:83429985-83430004 MsG0480023294.01.T01:intron 30.0%
TGTTGTGAATTACTACTATG+AGG + Chr4:83429790-83429809 MsG0480023294.01.T01:intron 30.0%
TTATCTGAATCTGAATTGCA+TGG + Chr4:83430643-83430662 MsG0480023294.01.T01:CDS 30.0%
TTTGCATCCTATTGTTTAGT+TGG + Chr4:83426588-83426607 MsG0480023294.01.T01:intron 30.0%
! AAATTTAGTGAGGTATCACA+TGG + Chr4:83429082-83429101 MsG0480023294.01.T01:intron 30.0%
! CAAACTTCTTTTTATGGAGT+TGG + Chr4:83429905-83429924 MsG0480023294.01.T01:intron 30.0%
! GAAGCATTTGTAACTATTCA+TGG + Chr4:83428707-83428726 MsG0480023294.01.T01:intron 30.0%
! GATTTGTTTCAATGGATTTC+AGG + Chr4:83428801-83428820 MsG0480023294.01.T01:intron 30.0%
! TAACATTGTATTTTACGGGT+GGG + Chr4:83429001-83429020 MsG0480023294.01.T01:intron 30.0%
! TGAGTATATTGATAACAGGA+CGG - Chr4:83428435-83428454 None:intergenic 30.0%
! TGGTTGAGTATATTGATAAC+AGG - Chr4:83428439-83428458 None:intergenic 30.0%
! TTAACATTGTATTTTACGGG+TGG + Chr4:83429000-83429019 MsG0480023294.01.T01:intron 30.0%
!!! GCTTGATTTGGTTTTATTGT+TGG + Chr4:83429927-83429946 MsG0480023294.01.T01:intron 30.0%
!!! GTTGTTTTTTGTTTTCAGAG+AGG - Chr4:83428175-83428194 None:intergenic 30.0%
!!! TGATTTGGTTTTATTGTTGG+TGG + Chr4:83429930-83429949 MsG0480023294.01.T01:intron 30.0%
!!! TTTTTTAGGCTCATAGTAGA+GGG + Chr4:83429033-83429052 MsG0480023294.01.T01:intron 30.0%
AAAAGTCACGGATCATAAAG+GGG + Chr4:83427641-83427660 MsG0480023294.01.T01:intron 35.0%
AAAATTTGTATGCCACGTAG+AGG - Chr4:83426928-83426947 None:intergenic 35.0%
AACAAACCAACCGTATCTAT+AGG + Chr4:83427789-83427808 MsG0480023294.01.T01:intron 35.0%
AATGTTCTTTCTGTCAAACC+AGG + Chr4:83427836-83427855 MsG0480023294.01.T01:intron 35.0%
AATTACGTGGAACAAGGAAA+AGG - Chr4:83428504-83428523 None:intergenic 35.0%
ACAAAAGTCACGGATCATAA+AGG + Chr4:83427639-83427658 MsG0480023294.01.T01:intron 35.0%
ACTAACAATCTTCAGAGACA+GGG + Chr4:83428908-83428927 MsG0480023294.01.T01:intron 35.0%
AGATCACATGGGTACAATAT+TGG - Chr4:83428459-83428478 None:intergenic 35.0%
AGATGATTCAACTTCACAAC+TGG + Chr4:83429364-83429383 MsG0480023294.01.T01:intron 35.0%
ATCAGAACACAACTGTCATT+TGG - Chr4:83428320-83428339 None:intergenic 35.0%
ATGAGTGAAATGCACAATGA+AGG + Chr4:83429872-83429891 MsG0480023294.01.T01:intron 35.0%
ATGATTCAAACGTGCTGAAT+TGG - Chr4:83426157-83426176 None:intergenic 35.0%
ATGCTATTGCGATGTGAATT+AGG - Chr4:83425779-83425798 None:intergenic 35.0%
ATGTTCTTTCTGTCAAACCA+GGG + Chr4:83427837-83427856 MsG0480023294.01.T01:intron 35.0%
ATTACGTGGAACAAGGAAAA+GGG - Chr4:83428503-83428522 None:intergenic 35.0%
ATTAGTTCACACACGCTATT+AGG + Chr4:83428668-83428687 MsG0480023294.01.T01:intron 35.0%
ATTCACATCGCAATAGCATT+TGG + Chr4:83425780-83425799 MsG0480023294.01.T01:five_prime_UTR 35.0%
CAAAAGTCACGGATCATAAA+GGG + Chr4:83427640-83427659 MsG0480023294.01.T01:intron 35.0%
CAAGAATAGCAAGATCACAT+GGG - Chr4:83428470-83428489 None:intergenic 35.0%
CCTAATCAACGTAAAGGATA+AGG + Chr4:83426634-83426653 MsG0480023294.01.T01:intron 35.0%
CTGAAGACACATGAATTTCA+AGG - Chr4:83430467-83430486 None:intergenic 35.0%
CTTGAAATTCATGTGTCTTC+AGG + Chr4:83430465-83430484 MsG0480023294.01.T01:intron 35.0%
GAATGAAACAATATCGTCCT+AGG + Chr4:83430807-83430826 MsG0480023294.01.T01:CDS 35.0%
GACGACAAAAAAGAACAAGT+TGG - Chr4:83426886-83426905 None:intergenic 35.0%
GAGATCAATGTTGTCAATCA+TGG + Chr4:83427263-83427282 MsG0480023294.01.T01:intron 35.0%
GCAATTCAGATTCAGATAAC+AGG - Chr4:83430642-83430661 None:intergenic 35.0%
GCATTTGTAACTATTCATGG+TGG + Chr4:83428710-83428729 MsG0480023294.01.T01:intron 35.0%
GTATCTATAGGTGAACATGT+TGG + Chr4:83427801-83427820 MsG0480023294.01.T01:intron 35.0%
GTTAATCACGACGATAATCA+TGG - Chr4:83426188-83426207 None:intergenic 35.0%
TAACATCCAGCGCTAATTAT+AGG - Chr4:83428983-83429002 None:intergenic 35.0%
TACTAACAATCTTCAGAGAC+AGG + Chr4:83428907-83428926 MsG0480023294.01.T01:intron 35.0%
TATATGCAAGACTCATGTCT+CGG - Chr4:83430328-83430347 None:intergenic 35.0%
TCAAGAATAGCAAGATCACA+TGG - Chr4:83428471-83428490 None:intergenic 35.0%
TCCACATAAGCAAAACCTTT+AGG - Chr4:83430586-83430605 None:intergenic 35.0%
TGCAATCTTCCTCATTCTTT+AGG + Chr4:83429739-83429758 MsG0480023294.01.T01:intron 35.0%
TGTCTCTTAACTCCATTATG+TGG + Chr4:83427045-83427064 MsG0480023294.01.T01:intron 35.0%
TGTGAATTACTACTATGAGG+AGG + Chr4:83429793-83429812 MsG0480023294.01.T01:intron 35.0%
TTCAATCCTTACATGGCATA+TGG + Chr4:83430833-83430852 MsG0480023294.01.T01:CDS 35.0%
TTGTTTCATTCCAGGAACAT+TGG - Chr4:83430798-83430817 None:intergenic 35.0%
! ATAATGGAGTTAAGAGACAG+AGG - Chr4:83427044-83427063 None:intergenic 35.0%
! CCTTATCCTTTACGTTGATT+AGG - Chr4:83426637-83426656 None:intergenic 35.0%
! GAATGTCGTCTTTGAAAAGT+AGG + Chr4:83427702-83427721 MsG0480023294.01.T01:intron 35.0%
! GTGCATTTCACTCATTTTAC+AGG - Chr4:83429867-83429886 None:intergenic 35.0%
!! CATTTTGAGGAAACTGTGAA+TGG + Chr4:83429288-83429307 MsG0480023294.01.T01:intron 35.0%
!! GAATAAATGGGCTGAAACTA+AGG - Chr4:83427148-83427167 None:intergenic 35.0%
!! GACGTCTTTCAATTTTGAAG+CGG - Chr4:83428125-83428144 None:intergenic 35.0%
!! TTGTTTTTCAATCGGAACCA+TGG + Chr4:83426546-83426565 MsG0480023294.01.T01:intron 35.0%
!! TTTATGGAGTTGGCTTGATT+TGG + Chr4:83429915-83429934 MsG0480023294.01.T01:intron 35.0%
!! TTTTTAGGCTCATAGTAGAG+GGG + Chr4:83429034-83429053 MsG0480023294.01.T01:intron 35.0%
!!! GTTTTTTAGGCTCATAGTAG+AGG + Chr4:83429032-83429051 MsG0480023294.01.T01:intron 35.0%
AAAGTCACGGATCATAAAGG+GGG + Chr4:83427642-83427661 MsG0480023294.01.T01:intron 40.0%
AAATTCACTAGACGAGCTCA+TGG - Chr4:83430725-83430744 None:intergenic 40.0%
AATGTTCTGTCTGTCAAACC+AGG + Chr4:83427168-83427187 MsG0480023294.01.T01:intron 40.0%
ACAACAGTACCAACCTTATC+AGG - Chr4:83429776-83429795 None:intergenic 40.0%
ACATCCTCACAAATTCAGAG+AGG - Chr4:83428283-83428302 None:intergenic 40.0%
ACCTAGTTGCAGTCAACAAA+AGG - Chr4:83429459-83429478 None:intergenic 40.0%
ACTATCCTGACAGACAAGTT+TGG + Chr4:83430556-83430575 MsG0480023294.01.T01:CDS 40.0%
AGGCTTATGTGGCATTCATT+TGG - Chr4:83427024-83427043 None:intergenic 40.0%
ATATATACTGCAGTATGCGG+AGG + Chr4:83427529-83427548 MsG0480023294.01.T01:intron 40.0%
ATATGTCTCACTATGATCGC+AGG + Chr4:83428937-83428956 MsG0480023294.01.T01:intron 40.0%
ATGAGCCTAAAAAACACCAG+TGG - Chr4:83429027-83429046 None:intergenic 40.0%
ATGGTATCAAATAGCAGCTG+TGG - Chr4:83427339-83427358 None:intergenic 40.0%
ATGTAAGGATTGAATCGCCT+AGG - Chr4:83430827-83430846 None:intergenic 40.0%
ATGTACTCCCCTTATGGATA+TGG + Chr4:83430884-83430903 MsG0480023294.01.T01:CDS 40.0%
ATGTTCTGTCTGTCAAACCA+GGG + Chr4:83427169-83427188 MsG0480023294.01.T01:intron 40.0%
ATTTATCCTGTTGAGTGCAG+AGG + Chr4:83427958-83427977 MsG0480023294.01.T01:intron 40.0%
CAGAAACTGAGTCCACATAA+TGG - Chr4:83427060-83427079 None:intergenic 40.0%
CTGAATTGGATTGCATGCAA+TGG - Chr4:83426143-83426162 None:intergenic 40.0%
CTGATGCGTGAAATAAGGAT+TGG + Chr4:83428335-83428354 MsG0480023294.01.T01:intron 40.0%
CTTCTTCCATTTCCTTCAAG+CGG - Chr4:83425956-83425975 None:intergenic 40.0%
GACTTCACAATGACTTTGCA+GGG + Chr4:83430080-83430099 MsG0480023294.01.T01:intron 40.0%
GATACGGATGTTATGTTTCC+AGG + Chr4:83430757-83430776 MsG0480023294.01.T01:intron 40.0%
GGACGATATTGTTTCATTCC+AGG - Chr4:83430806-83430825 None:intergenic 40.0%
GGCATTCATTTGGTCTAACA+CGG - Chr4:83427014-83427033 None:intergenic 40.0%
GGGGGAAAATTCAGAATTAG+TGG + Chr4:83427660-83427679 MsG0480023294.01.T01:intron 40.0%
GTGAAATGCACAATGAAGGA+TGG + Chr4:83429876-83429895 MsG0480023294.01.T01:intron 40.0%
GTGGGAACATTAGGAATTTG+AGG + Chr4:83428729-83428748 MsG0480023294.01.T01:intron 40.0%
GTGTTCTGATGCGTGAAATA+AGG + Chr4:83428330-83428349 MsG0480023294.01.T01:intron 40.0%
GTTACCTCTCTGAATTTGTG+AGG + Chr4:83428276-83428295 MsG0480023294.01.T01:intron 40.0%
TAGGCGATTCAATCCTTACA+TGG + Chr4:83430826-83430845 MsG0480023294.01.T01:CDS 40.0%
TATGTCTCACTATGATCGCA+GGG + Chr4:83428938-83428957 MsG0480023294.01.T01:intron 40.0%
TCTTCGTGAAATGCATGCTA+AGG + Chr4:83425986-83426005 MsG0480023294.01.T01:CDS 40.0%
TGACTTCACAATGACTTTGC+AGG + Chr4:83430079-83430098 MsG0480023294.01.T01:intron 40.0%
TGATTCAACTTCACAACTGG+AGG + Chr4:83429367-83429386 MsG0480023294.01.T01:intron 40.0%
TGCACAATGAAGGATGGTAT+AGG + Chr4:83429882-83429901 MsG0480023294.01.T01:intron 40.0%
TGCATGCAATGGAGTTGAAT+CGG - Chr4:83426132-83426151 None:intergenic 40.0%
TGTACTCCCCTTATGGATAT+GGG + Chr4:83430885-83430904 MsG0480023294.01.T01:CDS 40.0%
TGTTCACCTATAGATACGGT+TGG - Chr4:83427798-83427817 None:intergenic 40.0%
TGTTCTTTCTGTCAAACCAG+GGG + Chr4:83427838-83427857 MsG0480023294.01.T01:intron 40.0%
TGTTGAAACTGAAGCTGTTC+AGG + Chr4:83430609-83430628 MsG0480023294.01.T01:CDS 40.0%
TTAAGAGACAGAGGCTTATG+TGG - Chr4:83427035-83427054 None:intergenic 40.0%
TTGCGTACCCATATCCATAA+GGG - Chr4:83430895-83430914 None:intergenic 40.0%
TTTATACCTCTGCACTCAAC+AGG - Chr4:83427967-83427986 None:intergenic 40.0%
! AAAAGAACAAGTTGGAAGCG+AGG - Chr4:83426878-83426897 None:intergenic 40.0%
! ACTGTCATTTGGTCTCTGTT+CGG - Chr4:83428309-83428328 None:intergenic 40.0%
! ATAAGGGGAGTACATGTAAG+GGG - Chr4:83430879-83430898 None:intergenic 40.0%
! CATAAGGGGAGTACATGTAA+GGG - Chr4:83430880-83430899 None:intergenic 40.0%
! CTATTCATGGTGGGAACATT+AGG + Chr4:83428720-83428739 MsG0480023294.01.T01:intron 40.0%
! GAAGAAGAGCATGAGGTTTA+CGG + Chr4:83425831-83425850 MsG0480023294.01.T01:CDS 40.0%
! GCCTAAAGGTTTTGCTTATG+TGG + Chr4:83430582-83430601 MsG0480023294.01.T01:CDS 40.0%
! TAGGAATTTGAGGCCTTCAT+TGG + Chr4:83428739-83428758 MsG0480023294.01.T01:intron 40.0%
! TCAGAATGCTGTGAGTTTTC+TGG + Chr4:83428370-83428389 MsG0480023294.01.T01:intron 40.0%
! TTTAGTGAGGTATCACATGG+AGG + Chr4:83429085-83429104 MsG0480023294.01.T01:intron 40.0%
! TTTTAGGCTCATAGTAGAGG+GGG + Chr4:83429035-83429054 MsG0480023294.01.T01:intron 40.0%
!! ATGCTCTAAGAGAGTTGGTT+TGG + Chr4:83428395-83428414 MsG0480023294.01.T01:intron 40.0%
!! TCCTTTTGTTGACTGCAACT+AGG + Chr4:83429455-83429474 MsG0480023294.01.T01:intron 40.0%
!! TGGAAATGCTCTAAGAGAGT+TGG + Chr4:83428390-83428409 MsG0480023294.01.T01:intron 40.0%
!!! GAATTGGGTTTTAGCTCATC+TGG + Chr4:83430403-83430422 MsG0480023294.01.T01:intron 40.0%
!!! GATGCTAGGTCTGTTTTTGT+CGG + Chr4:83426489-83426508 MsG0480023294.01.T01:CDS 40.0%
!!! GTTTTATTGTTGGTGGCTTG+TGG + Chr4:83429937-83429956 MsG0480023294.01.T01:intron 40.0%
AAAATCAAAAGGGCGGCAGT+TGG + Chr4:83426737-83426756 MsG0480023294.01.T01:intron 45.0%
AATGCATGCTAAGGTCGAGA+AGG + Chr4:83425995-83426014 MsG0480023294.01.T01:CDS 45.0%
ACGTGTCCTATAATTAGCGC+TGG + Chr4:83428974-83428993 MsG0480023294.01.T01:intron 45.0%
AGCATGCATTTCACGAAGAG+CGG - Chr4:83425985-83426004 None:intergenic 45.0%
AGCTGCTTCTCAGGAAAACA+AGG + Chr4:83426458-83426477 MsG0480023294.01.T01:CDS 45.0%
AGTCATGTGGTACAGTGAAC+AGG + Chr4:83430530-83430549 MsG0480023294.01.T01:CDS 45.0%
AGTTTCTGCCATGCTCATGA+GGG - Chr4:83429317-83429336 None:intergenic 45.0%
ATTTGGTCTAACACGGTGAC+AGG - Chr4:83427007-83427026 None:intergenic 45.0%
CAGCAACACTTTCAGTCATG+TGG + Chr4:83430517-83430536 MsG0480023294.01.T01:CDS 45.0%
CCTTACATGTACTCCCCTTA+TGG + Chr4:83430878-83430897 MsG0480023294.01.T01:CDS 45.0%
CGTGGAATCGAAAGGAAAGA+TGG + Chr4:83425806-83425825 MsG0480023294.01.T01:exon 45.0%
CTGAAGCCATATGCCATGTA+AGG - Chr4:83430842-83430861 None:intergenic 45.0%
CTTACATGGCATATGGCTTC+AGG + Chr4:83430840-83430859 MsG0480023294.01.T01:CDS 45.0%
GACAAGTTTGGTCAGCCTAA+AGG + Chr4:83430568-83430587 MsG0480023294.01.T01:CDS 45.0%
GACACTCGCTATAGCATAGA+CGG - Chr4:83427315-83427334 None:intergenic 45.0%
GATCTCAAAGCTGCTATTGC+AGG + Chr4:83427922-83427941 MsG0480023294.01.T01:intron 45.0%
GCAGAAACTAGTACAGCTGA+AGG + Chr4:83429328-83429347 MsG0480023294.01.T01:intron 45.0%
GCTAAGGTCGAGAAGGAAAT+TGG + Chr4:83426002-83426021 MsG0480023294.01.T01:CDS 45.0%
GGATGCAAACATGCACGTAA+AGG - Chr4:83426577-83426596 None:intergenic 45.0%
GTCATGTGGTACAGTGAACA+GGG + Chr4:83430531-83430550 MsG0480023294.01.T01:CDS 45.0%
GTTGCGTACCCATATCCATA+AGG - Chr4:83430896-83430915 None:intergenic 45.0%
TAGTTTCTGCCATGCTCATG+AGG - Chr4:83429318-83429337 None:intergenic 45.0%
TGAAACTGAAGCTGTTCAGG+AGG + Chr4:83430612-83430631 MsG0480023294.01.T01:CDS 45.0%
TGATTATGCATGCACACCAG+AGG + Chr4:83430489-83430508 MsG0480023294.01.T01:CDS 45.0%
TGCAAACATGCACGTAAAGG+AGG - Chr4:83426574-83426593 None:intergenic 45.0%
TGCGTACCCATATCCATAAG+GGG - Chr4:83430894-83430913 None:intergenic 45.0%
TGCTTCTCAGGAAAACAAGG+AGG + Chr4:83426461-83426480 MsG0480023294.01.T01:CDS 45.0%
TGTTCTGTCTGTCAAACCAG+GGG + Chr4:83427170-83427189 MsG0480023294.01.T01:intron 45.0%
TTCTCAGGAAAACAAGGAGG+AGG + Chr4:83426464-83426483 MsG0480023294.01.T01:CDS 45.0%
TTGGGCAAATGACACAGTAG+AGG - Chr4:83429490-83429509 None:intergenic 45.0%
TTTGGTCTAACACGGTGACA+GGG - Chr4:83427006-83427025 None:intergenic 45.0%
TTTGGTTGCGTGGAATCGAA+AGG + Chr4:83425798-83425817 MsG0480023294.01.T01:five_prime_UTR 45.0%
! AAGGAAATTGGCTCCGTTCA+AGG + Chr4:83426014-83426033 MsG0480023294.01.T01:CDS 45.0%
! AGGCTTTTCTCAAACTCCAC+AGG - Chr4:83429847-83429866 None:intergenic 45.0%
! ATGCGGAGGTATAAATGCTC+AGG + Chr4:83427543-83427562 MsG0480023294.01.T01:intron 45.0%
! CCATAAGGGGAGTACATGTA+AGG - Chr4:83430881-83430900 None:intergenic 45.0%
! GAGACAGCTTGTGGTTCTTT+TGG + Chr4:83429389-83429408 MsG0480023294.01.T01:intron 45.0%
! GATGGATGAAGAAGAGCATG+AGG + Chr4:83425824-83425843 MsG0480023294.01.T01:exon 45.0%
! TAAGGGGAGTACATGTAAGG+GGG - Chr4:83430878-83430897 None:intergenic 45.0%
! TACATGTAAGGGGGAGCATA+AGG - Chr4:83430869-83430888 None:intergenic 45.0%
! TGCGTGAAATAAGGATTGGC+TGG + Chr4:83428339-83428358 MsG0480023294.01.T01:intron 45.0%
!! ATAGCAGCTTTGAGATCAGC+TGG - Chr4:83427919-83427938 None:intergenic 45.0%
!! CCATTTTTCCCTCTTAGACC+GGG + Chr4:83427122-83427141 MsG0480023294.01.T01:intron 45.0%
!! TAGCAGCTTTGAGATCAGCT+GGG - Chr4:83427918-83427937 None:intergenic 45.0%
!!! GCCATTTTTCCCTCTTAGAC+CGG + Chr4:83427121-83427140 MsG0480023294.01.T01:intron 45.0%
AAACCAGGGGTCGCAGAATT+TGG + Chr4:83427851-83427870 MsG0480023294.01.T01:intron 50.0%
AAACTAAGGCCCGGTCTAAG+AGG - Chr4:83427134-83427153 None:intergenic 50.0%
AACCAGGGGTCGCAGAATTT+GGG + Chr4:83427852-83427871 MsG0480023294.01.T01:intron 50.0%
AACTAAGGCCCGGTCTAAGA+GGG - Chr4:83427133-83427152 None:intergenic 50.0%
AATGGCATCCCTCATGAGCA+TGG + Chr4:83429306-83429325 MsG0480023294.01.T01:intron 50.0%
ACATGGCATATGGCTTCAGG+AGG + Chr4:83430843-83430862 MsG0480023294.01.T01:CDS 50.0%
AGTATGTGTGAGAAGGCCTG+TGG + Chr4:83429828-83429847 MsG0480023294.01.T01:intron 50.0%
ATCGAGCTCCTTCATACCAC+CGG - Chr4:83425922-83425941 None:intergenic 50.0%
ATGCATTTCACGAAGAGCGG+CGG - Chr4:83425982-83426001 None:intergenic 50.0%
ATTCCACAACGCTGTAGTGC+TGG + Chr4:83427403-83427422 MsG0480023294.01.T01:intron 50.0%
CATTTGCCCAACGTGCCAAA+GGG + Chr4:83429499-83429518 MsG0480023294.01.T01:intron 50.0%
CCAGGAACATTGGTCCTCTT+AGG - Chr4:83430788-83430807 None:intergenic 50.0%
CCCGGTCTAAGAGGGAAAAA+TGG - Chr4:83427125-83427144 None:intergenic 50.0%
CCTAAGAGGACCAATGTTCC+TGG + Chr4:83430785-83430804 MsG0480023294.01.T01:CDS 50.0%
CGCAATAGCATTTGGTTGCG+TGG + Chr4:83425788-83425807 MsG0480023294.01.T01:five_prime_UTR 50.0%
GATTTCAGGCTGAGCTGCAT+AGG + Chr4:83428815-83428834 MsG0480023294.01.T01:intron 50.0%
GCTGACCAAACTTGTCTGTC+AGG - Chr4:83430564-83430583 None:intergenic 50.0%
GTTTCCAGGTTCTGCCTAAG+AGG + Chr4:83430771-83430790 MsG0480023294.01.T01:intron 50.0%
TCATTTGCCCAACGTGCCAA+AGG + Chr4:83429498-83429517 MsG0480023294.01.T01:intron 50.0%
TCTCCGCTCACAACCAATGA+AGG - Chr4:83428755-83428774 None:intergenic 50.0%
TGAAGGAGCTCGATGAGATG+AGG + Chr4:83425928-83425947 MsG0480023294.01.T01:CDS 50.0%
TGAGAAGCAGCTACAGAAGC+AGG - Chr4:83426450-83426469 None:intergenic 50.0%
TGCACGTAAAGGAGGAACCA+TGG - Chr4:83426566-83426585 None:intergenic 50.0%
TGCTTCTGTAGCTGCTTCTC+AGG + Chr4:83426449-83426468 MsG0480023294.01.T01:CDS 50.0%
TTACTGTCCTGTCCTCTACG+TGG + Chr4:83426913-83426932 MsG0480023294.01.T01:intron 50.0%
TTGTATGCCACGTAGAGGAC+AGG - Chr4:83426923-83426942 None:intergenic 50.0%
! AAGTGTTGCTGCACTTCCTC+TGG - Chr4:83430508-83430527 None:intergenic 50.0%
! AGGCCTTCATTGGTTGTGAG+CGG + Chr4:83428749-83428768 MsG0480023294.01.T01:intron 50.0%
! GAAGAGCATGAGGTTTACGG+AGG + Chr4:83425834-83425853 MsG0480023294.01.T01:CDS 50.0%
!! AATGGGCTGAAACTAAGGCC+CGG - Chr4:83427143-83427162 None:intergenic 50.0%
!!! GTGGGCCACTGGTGTTTTTT+AGG + Chr4:83429019-83429038 MsG0480023294.01.T01:intron 50.0%
AACAACAGCTGCGCACCCTT+TGG - Chr4:83429517-83429536 None:intergenic 55.0%
AATCCCAGACGTGGCTGAGA+TGG + Chr4:83425860-83425879 MsG0480023294.01.T01:CDS 55.0%
ACAAGGAGGAGGCAGATGCT+AGG + Chr4:83426475-83426494 MsG0480023294.01.T01:CDS 55.0%
ACCAGGGGTCGCAGAATTTG+GGG + Chr4:83427853-83427872 MsG0480023294.01.T01:intron 55.0%
CAACTGGAGGAGACAGCTTG+TGG + Chr4:83429380-83429399 MsG0480023294.01.T01:intron 55.0%
CGATGAAGCCGGTGGTATGA+AGG + Chr4:83425911-83425930 MsG0480023294.01.T01:CDS 55.0%
CTGTCTGTCAAACCAGGGGT+CGG + Chr4:83427174-83427193 MsG0480023294.01.T01:intron 55.0%
CTTCCATCTCAGCCACGTCT+GGG - Chr4:83425866-83425885 None:intergenic 55.0%
TGGTCCTCTTAGGCAGAACC+TGG - Chr4:83430778-83430797 None:intergenic 55.0%
! GTATTTTACGGGTGGGCCAC+TGG + Chr4:83429008-83429027 MsG0480023294.01.T01:intron 55.0%
!! CATACCACCGGCTTCATCGT+CGG - Chr4:83425910-83425929 None:intergenic 55.0%
!! GCGCAGCTGTTGTTTCCCTT+TGG + Chr4:83429523-83429542 MsG0480023294.01.T01:intron 55.0%
AAAGCAGTTTCGCCGACCCC+TGG - Chr4:83427189-83427208 None:intergenic 60.0%
ACCCCAAATTCTGCGACCCC+TGG - Chr4:83427857-83427876 None:intergenic 60.0%
CCACCAGCACTACAGCGTTG+TGG - Chr4:83427409-83427428 None:intergenic 60.0%
CCAGACGTGGCTGAGATGGA+AGG + Chr4:83425864-83425883 MsG0480023294.01.T01:CDS 60.0%
CCTTCCATCTCAGCCACGTC+TGG - Chr4:83425867-83425886 None:intergenic 60.0%
CGGAGGAGAAATCCCAGACG+TGG + Chr4:83425851-83425870 MsG0480023294.01.T01:CDS 60.0%
TGCGCACCCTTTGGCACGTT+GGG - Chr4:83429508-83429527 None:intergenic 60.0%
! CCACAACGCTGTAGTGCTGG+TGG + Chr4:83427406-83427425 MsG0480023294.01.T01:intron 60.0%
!! GAGGCGCCGCTTGAAGGAAA+TGG + Chr4:83425947-83425966 MsG0480023294.01.T01:CDS 60.0%
!! TGAGATGAGGCGCCGCTTGA+AGG + Chr4:83425941-83425960 MsG0480023294.01.T01:CDS 60.0%
CTGCGCACCCTTTGGCACGT+TGG - Chr4:83429509-83429528 None:intergenic 65.0%
!! ACCACCGGCTTCATCGTCGG+CGG - Chr4:83425907-83425926 None:intergenic 65.0%
TCCGCCGCCGACGATGAAGC+CGG + Chr4:83425900-83425919 MsG0480023294.01.T01:CDS 70.0%
! ACCGGCTTCATCGTCGGCGG+CGG - Chr4:83425904-83425923 None:intergenic 70.0%
GCCGCCGACGATGAAGCCGG+TGG + Chr4:83425903-83425922 MsG0480023294.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 83425769 83430928 83425769 ID=MsG0480023294.01;Name=MsG0480023294.01
Chr4 mRNA 83425769 83430928 83425769 ID=MsG0480023294.01.T01;Parent=MsG0480023294.01;Name=MsG0480023294.01.T01;_AED=0.47;_eAED=0.48;_QI=56|1|0.75|1|1|1|4|0|207
Chr4 exon 83425769 83426035 83425769 ID=MsG0480023294.01.T01:exon:1105;Parent=MsG0480023294.01.T01
Chr4 exon 83426445 83426515 83426445 ID=MsG0480023294.01.T01:exon:1106;Parent=MsG0480023294.01.T01
Chr4 exon 83430487 83430678 83430487 ID=MsG0480023294.01.T01:exon:1107;Parent=MsG0480023294.01.T01
Chr4 exon 83430779 83430928 83430779 ID=MsG0480023294.01.T01:exon:1108;Parent=MsG0480023294.01.T01
Chr4 five_prime_UTR 83425769 83425824 83425769 ID=MsG0480023294.01.T01:five_prime_utr;Parent=MsG0480023294.01.T01
Chr4 CDS 83425825 83426035 83425825 ID=MsG0480023294.01.T01:cds;Parent=MsG0480023294.01.T01
Chr4 CDS 83426445 83426515 83426445 ID=MsG0480023294.01.T01:cds;Parent=MsG0480023294.01.T01
Chr4 CDS 83430487 83430678 83430487 ID=MsG0480023294.01.T01:cds;Parent=MsG0480023294.01.T01
Chr4 CDS 83430779 83430928 83430779 ID=MsG0480023294.01.T01:cds;Parent=MsG0480023294.01.T01
Gene Sequence

>MsG0480023294.01.T01

ATGGATGAAGAAGAGCATGAGGTTTACGGAGGAGAAATCCCAGACGTGGCTGAGATGGAAGGAGACGTCGACATGTCCGCCGCCGACGATGAAGCCGGTGGTATGAAGGAGCTCGATGAGATGAGGCGCCGCTTGAAGGAAATGGAAGAAGAAGCCGCCGCTCTTCGTGAAATGCATGCTAAGGTCGAGAAGGAAATTGGCTCCGTTCAAGATCCTGCTTCTGTAGCTGCTTCTCAGGAAAACAAGGAGGAGGCAGATGCTAGGTCTGTTTTTGTCGGCAATGTTGATTATGCATGCACACCAGAGGAAGTGCAGCAACACTTTCAGTCATGTGGTACAGTGAACAGGGTCACTATCCTGACAGACAAGTTTGGTCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAACTGAAGCTGTTCAGGAGGCTCTCCTGTTATCTGAATCTGAATTGCATGGCCGTCAATTGAAAGTTCTGCCTAAGAGGACCAATGTTCCTGGAATGAAACAATATCGTCCTAGGCGATTCAATCCTTACATGGCATATGGCTTCAGGAGGCCTTATGCTCCCCCTTACATGTACTCCCCTTATGGATATGGGTACGCAACATGCCTCATTTAA
Protein sequence

>MsG0480023294.01.T01

MDEEEHEVYGGEIPDVAEMEGDVDMSAADDEAGGMKELDEMRRRLKEMEEEAAALREMHAKVEKEIGSVQDPASVAASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYAPPYMYSPYGYGYATCLI*