AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023236.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023236.01.T01 MTR_8g089740 79.377 674 45 5 6 623 1 636 0.0 1073
MsG0480023236.01.T01 MTR_8g089745 74.890 681 75 6 1 624 1 642 0.0 1011
MsG0480023236.01.T01 MTR_2g096530 68.814 683 114 9 1 624 1 643 0.0 914
MsG0480023236.01.T01 MTR_3g086580 55.895 687 196 11 1 624 1 643 0.0 743
MsG0480023236.01.T01 MTR_8g089745 71.456 515 51 6 1 458 1 476 0.0 710
MsG0480023236.01.T01 MTR_8g089725 69.610 385 68 4 1 374 1 347 0.0 552
MsG0480023236.01.T01 MTR_8g089725 53.077 130 47 2 494 623 389 504 1.11e-31 129
MsG0480023236.01.T01 MTR_8g089735 69.610 385 68 4 1 374 1 347 0.0 551
MsG0480023236.01.T01 MTR_8g089735 52.308 130 48 2 494 623 389 504 4.91e-31 127
MsG0480023236.01.T01 MTR_3g086580 54.489 479 140 8 201 624 1 456 2.63e-174 503
MsG0480023236.01.T01 MTR_8g089780 66.667 84 27 1 521 604 44 126 5.85e-28 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023236.01.T01 AT3G26380 47.852 675 245 11 11 624 17 645 0.0 624
MsG0480023236.01.T01 AT3G26380 48.008 502 160 8 11 456 17 473 2.24e-155 456

Find 171 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATATTCTTTCTATTTAA+TGG 0.083718 4:-82435025 None:intergenic
GATAAACATTAAATAATATT+TGG 0.139094 4:-82435131 None:intergenic
GTCTCTTTCTTGGTTCTATT+TGG 0.146856 4:+82435254 MsG0480023236.01.T01:CDS
AAAGCAATTGGTTGGATTAC+TGG 0.200488 4:+82438032 MsG0480023236.01.T01:CDS
TCTTGGTTCTATTTGGCTTC+TGG 0.226137 4:+82435261 MsG0480023236.01.T01:CDS
CAAATGAGAGTTTGCTTAGA+TGG 0.241217 4:+82438319 MsG0480023236.01.T01:CDS
AGTGCATAGCTTAGGTTTAA+AGG 0.243425 4:+82436226 MsG0480023236.01.T01:CDS
AATGTGCTTAGTCTCTTTCT+TGG 0.243830 4:+82435244 MsG0480023236.01.T01:CDS
TGTGGCTCTCTTCAACTCTT+TGG 0.249092 4:-82438365 None:intergenic
ATCTGATGTCTTTGCATATA+CGG 0.255893 4:-82439148 None:intergenic
ATAGGAGCAAAAGGTTTAAA+AGG 0.258246 4:+82437338 MsG0480023236.01.T01:CDS
CTGGAAGAAGGCCACCTTAC+TGG 0.270190 4:-82436170 None:intergenic
ATAGGTAGGAACTTTGTAAT+TGG 0.284279 4:+82439503 MsG0480023236.01.T01:three_prime_UTR
TGTGCAGCAAATGTAGTTTC+AGG 0.303301 4:+82439045 MsG0480023236.01.T01:intron
ATGAGTGTAAATACAAAGTT+AGG 0.307985 4:+82436561 MsG0480023236.01.T01:CDS
GTTCTACATTGCAACTAGTT+TGG 0.309690 4:+82439300 MsG0480023236.01.T01:exon
CAAAGGAAAGCAAAAGAAAA+AGG 0.310991 4:+82439350 MsG0480023236.01.T01:three_prime_UTR
AAGAAAGGGAGAAGTGTATT+TGG 0.312271 4:+82439095 MsG0480023236.01.T01:CDS
AGGGACGATATTCATGGATT+TGG 0.312602 4:+82439254 MsG0480023236.01.T01:CDS
GCTGCTTGGGGTGTTGATCT+TGG 0.336666 4:+82436624 MsG0480023236.01.T01:CDS
TCATGAGCAGTATGCTGCTT+GGG 0.341661 4:+82436611 MsG0480023236.01.T01:CDS
TCCATGAACAACGCCTTTGT+TGG 0.348997 4:-82436524 None:intergenic
AATGAATATCAGCAACGTAT+AGG 0.354742 4:+82437942 MsG0480023236.01.T01:CDS
ATGAATATCAGCAACGTATA+GGG 0.357214 4:+82437943 MsG0480023236.01.T01:CDS
TTTGTGTATTCTTTATCTCC+TGG 0.360274 4:+82437020 MsG0480023236.01.T01:CDS
CGTTGTTCATGGATGTCTAA+TGG 0.360621 4:+82436534 MsG0480023236.01.T01:CDS
CATCTAAGCAAACTCTCATT+TGG 0.370852 4:-82438318 None:intergenic
GCTGGTGTCACACTGGTTCC+AGG 0.372851 4:-82437038 None:intergenic
TTTCAGGTGGGATTCGGTCT+TGG 0.386776 4:+82439061 MsG0480023236.01.T01:CDS
CCTTCTTCCAGAGGTGGAAA+TGG 0.387609 4:+82436182 MsG0480023236.01.T01:CDS
GTCAACATGTATCGCATAAC+AGG 0.387701 4:+82437086 MsG0480023236.01.T01:CDS
TTCATGGATTTGGAAGTTCA+TGG 0.388270 4:+82439264 MsG0480023236.01.T01:CDS
TTTAATGTTTATCTGAAAGA+TGG 0.388761 4:+82435141 MsG0480023236.01.T01:five_prime_UTR
ATCAAGAACTCGGTCGAGTA+TGG 0.391800 4:+82436481 MsG0480023236.01.T01:CDS
GAAGGCCACCTTACTGGATC+AGG 0.394306 4:-82436164 None:intergenic
TCCAACAAAGGCGTTGTTCA+TGG 0.395588 4:+82436523 MsG0480023236.01.T01:CDS
AAGGTTTAAAAGGAAGTTCC+TGG 0.404139 4:+82437348 MsG0480023236.01.T01:CDS
ATTCGACGTGATTGATCAAT+GGG 0.408151 4:+82436130 MsG0480023236.01.T01:CDS
TATCCAGGAAAATGCATCAT+AGG 0.409613 4:-82435865 None:intergenic
TGACATGGACATGCTCCATT+TGG 0.412292 4:+82437373 MsG0480023236.01.T01:CDS
ATATGCAAAGACATCAGATT+TGG 0.413489 4:+82439152 MsG0480023236.01.T01:CDS
AAGCGTGATTACAATTTCAA+TGG 0.415600 4:-82438152 None:intergenic
CAGAAATTGATTCGTCTGCC+AGG 0.424636 4:-82439186 None:intergenic
TTGCAGATTGGACTCAAATC+AGG 0.433239 4:+82438396 MsG0480023236.01.T01:CDS
CTGTGTGTTTGGCGAGAACT+TGG 0.434746 4:+82436825 MsG0480023236.01.T01:CDS
CTGACATCCTTGGCCATGGC+TGG 0.435849 4:-82437056 None:intergenic
CTCTCTTGTGTACGCAGAAA+GGG 0.439787 4:-82438124 None:intergenic
ATGTAGTTTCAGGTGGGATT+CGG 0.441903 4:+82439055 MsG0480023236.01.T01:CDS
AAATCACCGTTGTTGTATCT+AGG 0.443192 4:-82436289 None:intergenic
TTCATGAGCAGTATGCTGCT+TGG 0.447697 4:+82436610 MsG0480023236.01.T01:CDS
CTATCGCGGGAAACATCATT+TGG 0.449452 4:+82438285 MsG0480023236.01.T01:CDS
GTGAAACATGACTGTGTGTT+TGG 0.450336 4:+82436814 MsG0480023236.01.T01:CDS
ACTGAATCCATTTCCACCTC+TGG 0.451537 4:-82436189 None:intergenic
GCTAAGAAAGTGCATAGCTT+AGG 0.454579 4:+82436218 MsG0480023236.01.T01:CDS
GATTCGACGTGATTGATCAA+TGG 0.455302 4:+82436129 MsG0480023236.01.T01:CDS
TTCTTCGAGCTCGTGACATA+AGG 0.455471 4:-82437912 None:intergenic
GGGAAAATGAGAACTAAGAA+AGG 0.458877 4:+82437963 MsG0480023236.01.T01:CDS
ATTCGGTCTTGGATTGCAAC+GGG 0.461504 4:+82439072 MsG0480023236.01.T01:CDS
ATTAGCACACAAGCTGTGAT+TGG 0.461726 4:+82436254 MsG0480023236.01.T01:CDS
GGTGCTAATATGAATTCTCT+TGG 0.465219 4:+82436107 MsG0480023236.01.T01:CDS
GCAACAGTAAAGTATATAGA+AGG 0.465577 4:+82438922 MsG0480023236.01.T01:CDS
TTAGCTGCAGCTAATATGAT+AGG 0.469264 4:+82437320 MsG0480023236.01.T01:CDS
AAACACTTCATAATTGTTGC+TGG 0.471090 4:-82435218 None:intergenic
CCGTTGTTGTATCTAGGATA+GGG 0.471404 4:-82436283 None:intergenic
AATGCAAGGGACGATATTCA+TGG 0.471540 4:+82439248 MsG0480023236.01.T01:CDS
TGCACAGAATCAAAAGCAAT+TGG 0.474099 4:+82438020 MsG0480023236.01.T01:CDS
CATAGCTTAGGTTTAAAGGC+AGG 0.476192 4:+82436230 MsG0480023236.01.T01:CDS
GCTAATATGATAGGAGCAAA+AGG 0.476239 4:+82437329 MsG0480023236.01.T01:CDS
GGAAAATGAGAACTAAGAAA+GGG 0.477343 4:+82437964 MsG0480023236.01.T01:CDS
TTGGATTGCAACGGGAAGAA+AGG 0.477718 4:+82439080 MsG0480023236.01.T01:CDS
TCTCTCTTGTGTACGCAGAA+AGG 0.477873 4:-82438125 None:intergenic
AAATGGAGCATGTCCATGTC+AGG 0.481219 4:-82437371 None:intergenic
CAGGAGATGACTGGGATACA+TGG 0.484804 4:+82437105 MsG0480023236.01.T01:CDS
GAGAAACAGATACATTCATT+AGG 0.485108 4:+82437987 MsG0480023236.01.T01:CDS
AGTTGAATCTAGAAGAGAAA+AGG 0.486832 4:+82437538 MsG0480023236.01.T01:CDS
CAGAATCAAAAGCAATTGGT+TGG 0.486886 4:+82438024 MsG0480023236.01.T01:CDS
TCGTCGATTACCTCTGGTAT+AGG 0.487431 4:+82436072 MsG0480023236.01.T01:CDS
TACGTAACTCGTTTACAGTA+TGG 0.489328 4:-82439434 None:intergenic
TTTCAAAGTATGTGATAGGT+AGG 0.494059 4:+82439489 MsG0480023236.01.T01:three_prime_UTR
GGCCATGGCTGGTGTCACAC+TGG 0.494953 4:-82437045 None:intergenic
GTAAATACAAAGTTAGGAGC+AGG 0.495808 4:+82436567 MsG0480023236.01.T01:CDS
TAAGCAAACTCTCATTTGGT+TGG 0.496043 4:-82438314 None:intergenic
CTTGAAAGAATCTGTTGGAA+AGG 0.499354 4:+82438077 MsG0480023236.01.T01:CDS
TTCATTTATTATTATTACAA+AGG 0.500557 4:+82439333 MsG0480023236.01.T01:three_prime_UTR
ACTATTTACCATGGTCCCAT+TGG 0.501852 4:-82438884 None:intergenic
GGAGATAAAGAATACACAAA+GGG 0.503485 4:-82437017 None:intergenic
TATTTGGCTTCTGGTTTCAG+AGG 0.503902 4:+82435270 MsG0480023236.01.T01:CDS
TCATAGGAATTCCAACCTCT+TGG 0.508505 4:-82435849 None:intergenic
TCTCCGTGTGCATGGATATG+AGG 0.509987 4:+82435935 MsG0480023236.01.T01:CDS
CTGGTATAGGAAGAACGTCC+CGG 0.511895 4:+82436085 MsG0480023236.01.T01:CDS
GGATCAGTTAACCATCCAAA+TGG 0.514461 4:-82437388 None:intergenic
GAGCATGTCCATGTCAGGCC+AGG 0.515227 4:-82437366 None:intergenic
TTGAAAGAATCTGTTGGAAA+GGG 0.515465 4:+82438078 MsG0480023236.01.T01:CDS
TCTGATGTCTTTGCATATAC+GGG 0.515700 4:-82439147 None:intergenic
CCATTTCCACCTCTGGAAGA+AGG 0.519384 4:-82436182 None:intergenic
GACTAGTCCACTGACATCCT+TGG 0.520438 4:-82437066 None:intergenic
ATACATTCATTAGGCCTCAC+TGG 0.522846 4:+82437996 MsG0480023236.01.T01:CDS
TCCACTGACATCCTTGGCCA+TGG 0.523454 4:-82437060 None:intergenic
AAGATCTTGAAAGAATCTGT+TGG 0.524983 4:+82438072 MsG0480023236.01.T01:CDS
ATCGCATAACAGGAGATGAC+TGG 0.529230 4:+82437096 MsG0480023236.01.T01:CDS
ACCGTTGTTGTATCTAGGAT+AGG 0.529603 4:-82436284 None:intergenic
TTCTTGTTCAGAAATTATCC+AGG 0.529766 4:-82435880 None:intergenic
AGGAAGTTCCTGGCCTGACA+TGG 0.532806 4:+82437358 MsG0480023236.01.T01:CDS
ATGTTGTCGTCGATTACCTC+TGG 0.534553 4:+82436066 MsG0480023236.01.T01:CDS
TTTGGGAGCTACACTCCAAT+GGG 0.538452 4:+82438869 MsG0480023236.01.T01:CDS
TGGATTGCAACGGGAAGAAA+GGG 0.539354 4:+82439081 MsG0480023236.01.T01:CDS
TCAAAATTACTGCAAAGCAT+AGG 0.541885 4:-82436769 None:intergenic
TAATTTGTAGGTGTGAATGA+AGG 0.544314 4:+82437498 MsG0480023236.01.T01:intron
TCTCAGCGTCTCCGTGTGCA+TGG 0.548892 4:+82435927 MsG0480023236.01.T01:CDS
AGATGACTGGGATACATGGC+AGG 0.549518 4:+82437109 MsG0480023236.01.T01:CDS
ATTTGGGAGCTACACTCCAA+TGG 0.550181 4:+82438868 MsG0480023236.01.T01:CDS
GGATGGTCCCTGATCCAGTA+AGG 0.552696 4:+82436156 MsG0480023236.01.T01:CDS
TAGGAATTCCAACCTCTTGG+TGG 0.556013 4:-82435846 None:intergenic
TGGTATAGGAAGAACGTCCC+GGG 0.556240 4:+82436086 MsG0480023236.01.T01:CDS
TAAGCTTGCCACCAAGAGGT+TGG 0.557235 4:+82435838 MsG0480023236.01.T01:CDS
AAGAACGTCGCAACAATGCA+AGG 0.558735 4:+82439234 MsG0480023236.01.T01:CDS
AAAGACATCAGATTTGGCTA+AGG 0.569800 4:+82439158 MsG0480023236.01.T01:CDS
GAAAATGAGAACTAAGAAAG+GGG 0.570546 4:+82437965 MsG0480023236.01.T01:CDS
GTAAGGTGGCCTTCTTCCAG+AGG 0.575028 4:+82436173 MsG0480023236.01.T01:CDS
GATTCGGTCTTGGATTGCAA+CGG 0.581318 4:+82439071 MsG0480023236.01.T01:CDS
GCAGCAAATGTAGTTTCAGG+TGG 0.582009 4:+82439048 MsG0480023236.01.T01:intron
CGAGATAAGCTATGTATCTG+AGG 0.588125 4:+82436855 MsG0480023236.01.T01:CDS
GATTGATCAATGGGGAAGGA+TGG 0.590419 4:+82436139 MsG0480023236.01.T01:CDS
TGTGACACCAGCCATGGCCA+AGG 0.591853 4:+82437049 MsG0480023236.01.T01:CDS
TTGATTCTGTGCAGCCAGTG+AGG 0.592952 4:-82438010 None:intergenic
GTAAGAGGTGTGTTGTGTGA+TGG 0.594014 4:+82435185 MsG0480023236.01.T01:five_prime_UTR
AGAAATTGATTCGTCTGCCA+GGG 0.594831 4:-82439185 None:intergenic
ACCATGGTAAATAGTTACTC+AGG 0.597333 4:+82438892 MsG0480023236.01.T01:CDS
CATGAGCAGTATGCTGCTTG+GGG 0.603110 4:+82436612 MsG0480023236.01.T01:CDS
AACCAGTGTGACACCAGCCA+TGG 0.604152 4:+82437043 MsG0480023236.01.T01:CDS
ATAGCTTAGGTTTAAAGGCA+GGG 0.610146 4:+82436231 MsG0480023236.01.T01:CDS
ATGGACATGCTCCATTTGGA+TGG 0.610813 4:+82437377 MsG0480023236.01.T01:CDS
ACGTGATTGATCAATGGGGA+AGG 0.613086 4:+82436135 MsG0480023236.01.T01:CDS
AGGTGGCCTTCTTCCAGAGG+TGG 0.615083 4:+82436176 MsG0480023236.01.T01:CDS
CAGCAAATGTAGTTTCAGGT+GGG 0.617411 4:+82439049 MsG0480023236.01.T01:intron
CGTTGTTGTATCTAGGATAG+GGG 0.617523 4:-82436282 None:intergenic
AGAGAATTCATATTAGCACC+CGG 0.618243 4:-82436104 None:intergenic
CACTCCACACTTCTTTACCG+TGG 0.620095 4:-82439209 None:intergenic
AGGAGATAAAGAATACACAA+AGG 0.620459 4:-82437018 None:intergenic
AGACGAATCAATTTCTGCCA+CGG 0.621946 4:+82439192 MsG0480023236.01.T01:CDS
TAACTCGTTTACAGTATGGT+GGG 0.626333 4:-82439430 None:intergenic
GGATACATGGCAGGATGTAG+CGG 0.629663 4:+82437118 MsG0480023236.01.T01:CDS
CAATCTGCAAGGAGAAAATG+TGG 0.630100 4:-82438383 None:intergenic
TCGCATAACAGGAGATGACT+GGG 0.633175 4:+82437097 MsG0480023236.01.T01:CDS
CAAGTAAGCTTGCCACCAAG+AGG 0.639523 4:+82435834 MsG0480023236.01.T01:CDS
TGATTTGAGTCCAATCTGCA+AGG 0.642316 4:-82438394 None:intergenic
GTAACTCGTTTACAGTATGG+TGG 0.642689 4:-82439431 None:intergenic
TGGAGAGACTATGTATCATG+AGG 0.643574 4:+82438261 MsG0480023236.01.T01:CDS
GCTACACTCCAATGGGACCA+TGG 0.645659 4:+82438876 MsG0480023236.01.T01:CDS
AAGACATAGCAATCCAACAA+AGG 0.649624 4:+82436511 MsG0480023236.01.T01:CDS
AAGGCCACCTTACTGGATCA+GGG 0.651343 4:-82436163 None:intergenic
TGTATCATGAGGACTATCGC+GGG 0.652382 4:+82438272 MsG0480023236.01.T01:CDS
GGTGCTGCTTATCAAGAACT+CGG 0.654526 4:+82436471 MsG0480023236.01.T01:CDS
ATGTATCATGAGGACTATCG+CGG 0.655248 4:+82438271 MsG0480023236.01.T01:CDS
TCTAGAAGAGAAAAGGACAC+AGG 0.656265 4:+82437545 MsG0480023236.01.T01:CDS
TCTGCCACGGTAAAGAAGTG+TGG 0.667869 4:+82439205 MsG0480023236.01.T01:CDS
AGAACGTCGCAACAATGCAA+GGG 0.668836 4:+82439235 MsG0480023236.01.T01:CDS
ACATCAAAAGCTCAACAATG+AGG 0.672263 4:-82439384 None:intergenic
GTGTGAATGAAGGTCCACAC+AGG 0.674130 4:+82437508 MsG0480023236.01.T01:CDS
GAGAATTCATATTAGCACCC+GGG 0.676507 4:-82436103 None:intergenic
TCCTGAGTAACTATTTACCA+TGG 0.677638 4:-82438893 None:intergenic
GCCATGGCCAAGGATGTCAG+TGG 0.680451 4:+82437059 MsG0480023236.01.T01:CDS
TGGTCCCTGATCCAGTAAGG+TGG 0.680637 4:+82436159 MsG0480023236.01.T01:CDS
CACGGTAAAGAAGTGTGGAG+TGG 0.681555 4:+82439210 MsG0480023236.01.T01:CDS
GAGATAAAGAATACACAAAG+GGG 0.688864 4:-82437016 None:intergenic
GGACGTTCTTCCTATACCAG+AGG 0.695704 4:-82436082 None:intergenic
ATACCTCATATCCATGCACA+CGG 0.706449 4:-82435938 None:intergenic
ATACTGTAAACGAGTTACGT+AGG 0.710677 4:+82439436 MsG0480023236.01.T01:three_prime_UTR
CCCTATCCTAGATACAACAA+CGG 0.711137 4:+82436283 MsG0480023236.01.T01:CDS
TTCAACTTACTATACCTGTG+TGG 0.720074 4:-82437522 None:intergenic
TTCGACGTGATTGATCAATG+GGG 0.778278 4:+82436131 MsG0480023236.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAGAAAAACATATT+AGG - Chr4:82435452-82435471 None:intergenic 10.0%
!! GATAAACATTAAATAATATT+TGG - Chr4:82435134-82435153 None:intergenic 10.0%
!! TTAATATTCTTTCTATTTAA+TGG - Chr4:82435028-82435047 None:intergenic 10.0%
!! TTCATTTATTATTATTACAA+AGG + Chr4:82439333-82439352 MsG0480023236.01.T01:three_prime_UTR 10.0%
!! ACACATTCAAATATAAATTA+TGG - Chr4:82435769-82435788 None:intergenic 15.0%
!!! GAATTTACAAAGTATTTATT+TGG + Chr4:82436714-82436733 MsG0480023236.01.T01:intron 15.0%
!! AAAATATGGATCATATATAC+AGG - Chr4:82438486-82438505 None:intergenic 20.0%
!! ATAACAGTTAATTGAAGAAT+TGG + Chr4:82435418-82435437 MsG0480023236.01.T01:intron 20.0%
!! ATTTGTATTATTGAGATTTG+CGG + Chr4:82438808-82438827 MsG0480023236.01.T01:intron 20.0%
!! CAAATCTCAATAATACAAAT+TGG - Chr4:82438808-82438827 None:intergenic 20.0%
!! TAACTTAAAAGAAGAATCTA+TGG - Chr4:82435307-82435326 None:intergenic 20.0%
!! TAGGGATAAAAATAATGAAT+TGG - Chr4:82438764-82438783 None:intergenic 20.0%
!! TTAACTGTTATAGTATACTA+TGG - Chr4:82435409-82435428 None:intergenic 20.0%
!! TTATAAATTCACAAGTATGT+CGG + Chr4:82436354-82436373 MsG0480023236.01.T01:intron 20.0%
!! TTTAATGTTTATCTGAAAGA+TGG + Chr4:82435141-82435160 MsG0480023236.01.T01:five_prime_UTR 20.0%
!! TTTATCCAAAAAAAGTTTGA+TGG - Chr4:82437828-82437847 None:intergenic 20.0%
!!! AAGAAAAACATATTAGGTTT+TGG - Chr4:82435446-82435465 None:intergenic 20.0%
!!! AATTTTGTCTTTAACAGATT+TGG + Chr4:82438851-82438870 MsG0480023236.01.T01:intron 20.0%
!!! ACTTTTTTTGGATAAATAGT+TGG + Chr4:82437832-82437851 MsG0480023236.01.T01:intron 20.0%
!!! ATTTATTTTGAGATAATTCC+TGG - Chr4:82435611-82435630 None:intergenic 20.0%
!!! ATTTTGTCTTTAACAGATTT+GGG + Chr4:82438852-82438871 MsG0480023236.01.T01:intron 20.0%
!!! GTATATAACCTTTAAAATTG+AGG - Chr4:82438705-82438724 None:intergenic 20.0%
!!! TATATATGATCCATATTTTC+AGG + Chr4:82438487-82438506 MsG0480023236.01.T01:intron 20.0%
!!! TTATTACTCATAATGGAAAT+TGG + Chr4:82439017-82439036 MsG0480023236.01.T01:intron 20.0%
!!! TTCTTTTAAGCTACATTTTT+TGG + Chr4:82435353-82435372 MsG0480023236.01.T01:intron 20.0%
!!! TTTAGTTCTTGAAATTTTGA+AGG + Chr4:82438586-82438605 MsG0480023236.01.T01:intron 20.0%
!!! TTTTTGAGTATTTAAGTAAG+AGG + Chr4:82435170-82435189 MsG0480023236.01.T01:five_prime_UTR 20.0%
!!! TTTTTTTCAAAGTATGTGAT+AGG + Chr4:82439485-82439504 MsG0480023236.01.T01:three_prime_UTR 20.0%
! AATTTATGTTGTTACAGAGA+TGG + Chr4:82438241-82438260 MsG0480023236.01.T01:intron 25.0%
! AGTTCATTAAATTCTGAATC+AGG + Chr4:82437294-82437313 MsG0480023236.01.T01:intron 25.0%
! ATGAGTGTAAATACAAAGTT+AGG + Chr4:82436561-82436580 MsG0480023236.01.T01:CDS 25.0%
! ATTCGTGATAATTTCATATG+TGG - Chr4:82437751-82437770 None:intergenic 25.0%
! GAAATGATTAATCTCTAGTA+GGG - Chr4:82437778-82437797 None:intergenic 25.0%
! GTTCATTAAATTCTGAATCA+GGG + Chr4:82437295-82437314 MsG0480023236.01.T01:intron 25.0%
! GTTTGATTATCCTGAAAATA+TGG - Chr4:82438500-82438519 None:intergenic 25.0%
! TATGAGGTATAAATACTGAA+AGG + Chr4:82435951-82435970 MsG0480023236.01.T01:intron 25.0%
! TATGTAATATGGTGAATTGA+GGG - Chr4:82437269-82437288 None:intergenic 25.0%
! TGAAATGATTAATCTCTAGT+AGG - Chr4:82437779-82437798 None:intergenic 25.0%
! TGAACTGAAGTTATGTAATA+TGG - Chr4:82437280-82437299 None:intergenic 25.0%
! TGATTATAAGACTTGAAGTA+TGG + Chr4:82437451-82437470 MsG0480023236.01.T01:intron 25.0%
! TTATGTAATATGGTGAATTG+AGG - Chr4:82437270-82437289 None:intergenic 25.0%
! TTTACTGCATTATAGTACAT+CGG + Chr4:82435999-82436018 MsG0480023236.01.T01:intron 25.0%
! TTTGTATTATTGAGATTTGC+GGG + Chr4:82438809-82438828 MsG0480023236.01.T01:intron 25.0%
!! AAGTTATATTTTGTCTAGCT+AGG - Chr4:82438783-82438802 None:intergenic 25.0%
!! AGTTATATTTTGTCTAGCTA+GGG - Chr4:82438782-82438801 None:intergenic 25.0%
!! ATAAAATTCATTTTGGACCA+AGG + Chr4:82435570-82435589 MsG0480023236.01.T01:intron 25.0%
!! TGTGCACATAAAATTCATTT+TGG + Chr4:82435563-82435582 MsG0480023236.01.T01:intron 25.0%
!!! AATAAGTCAGTTCTAAAATG+AGG - Chr4:82438970-82438989 None:intergenic 25.0%
!!! AGATTCTTCTTTTAAGTTAC+TGG + Chr4:82435308-82435327 MsG0480023236.01.T01:intron 25.0%
!!! ATAAGTCAGTTCTAAAATGA+GGG - Chr4:82438969-82438988 None:intergenic 25.0%
!!! CTTGGTTTTATTACTCATAA+TGG + Chr4:82439010-82439029 MsG0480023236.01.T01:intron 25.0%
AAACACTTCATAATTGTTGC+TGG - Chr4:82435221-82435240 None:intergenic 30.0%
AAGATCTTGAAAGAATCTGT+TGG + Chr4:82438072-82438091 MsG0480023236.01.T01:CDS 30.0%
AAGCGTGATTACAATTTCAA+TGG - Chr4:82438155-82438174 None:intergenic 30.0%
AATGAATATCAGCAACGTAT+AGG + Chr4:82437942-82437961 MsG0480023236.01.T01:CDS 30.0%
AGGAGATAAAGAATACACAA+AGG - Chr4:82437021-82437040 None:intergenic 30.0%
AGTTGAATCTAGAAGAGAAA+AGG + Chr4:82437538-82437557 MsG0480023236.01.T01:CDS 30.0%
ATAGGAGCAAAAGGTTTAAA+AGG + Chr4:82437338-82437357 MsG0480023236.01.T01:CDS 30.0%
ATAGGTAGGAACTTTGTAAT+TGG + Chr4:82439503-82439522 MsG0480023236.01.T01:three_prime_UTR 30.0%
ATATGCAAAGACATCAGATT+TGG + Chr4:82439152-82439171 MsG0480023236.01.T01:CDS 30.0%
ATCTGATGTCTTTGCATATA+CGG - Chr4:82439151-82439170 None:intergenic 30.0%
ATGAATATCAGCAACGTATA+GGG + Chr4:82437943-82437962 MsG0480023236.01.T01:CDS 30.0%
CAAAGGAAAGCAAAAGAAAA+AGG + Chr4:82439350-82439369 MsG0480023236.01.T01:three_prime_UTR 30.0%
GAAAATGAGAACTAAGAAAG+GGG + Chr4:82437965-82437984 MsG0480023236.01.T01:CDS 30.0%
GAGAAACAGATACATTCATT+AGG + Chr4:82437987-82438006 MsG0480023236.01.T01:CDS 30.0%
GAGATAAAGAATACACAAAG+GGG - Chr4:82437019-82437038 None:intergenic 30.0%
GCAACAGTAAAGTATATAGA+AGG + Chr4:82438922-82438941 MsG0480023236.01.T01:CDS 30.0%
GGAAAATGAGAACTAAGAAA+GGG + Chr4:82437964-82437983 MsG0480023236.01.T01:CDS 30.0%
GGAGATAAAGAATACACAAA+GGG - Chr4:82437020-82437039 None:intergenic 30.0%
TCAAAATTACTGCAAAGCAT+AGG - Chr4:82436772-82436791 None:intergenic 30.0%
TGAGACTAATTAACATGATC+TGG + Chr4:82435521-82435540 MsG0480023236.01.T01:intron 30.0%
TTCTTGTTCAGAAATTATCC+AGG - Chr4:82435883-82435902 None:intergenic 30.0%
TTGAAAGAATCTGTTGGAAA+GGG + Chr4:82438078-82438097 MsG0480023236.01.T01:CDS 30.0%
TTTCAAAGTATGTGATAGGT+AGG + Chr4:82439489-82439508 MsG0480023236.01.T01:three_prime_UTR 30.0%
TTTCAGCTCCAATAATATAG+AGG + Chr4:82437794-82437813 MsG0480023236.01.T01:intron 30.0%
TTTGTGTATTCTTTATCTCC+TGG + Chr4:82437020-82437039 MsG0480023236.01.T01:CDS 30.0%
! ACCTTTTCTTGCAATTTACT+AGG + Chr4:82436449-82436468 MsG0480023236.01.T01:intron 30.0%
! ATTTTGCGCCTCAATTTTAA+AGG + Chr4:82438694-82438713 MsG0480023236.01.T01:intron 30.0%
! CATACTTTGAAAAAAACACG+AGG - Chr4:82439481-82439500 None:intergenic 30.0%
! CCTTTTCTTGCAATTTACTA+GGG + Chr4:82436450-82436469 MsG0480023236.01.T01:intron 30.0%
! CTTGTTAATTTTGCTTTGCA+AGG + Chr4:82435072-82435091 MsG0480023236.01.T01:five_prime_UTR 30.0%
! TAATTTGTAGGTGTGAATGA+AGG + Chr4:82437498-82437517 MsG0480023236.01.T01:intron 30.0%
!! GTTCTTGAAATTTTGAAGGT+AGG + Chr4:82438590-82438609 MsG0480023236.01.T01:intron 30.0%
!! TAAATTGCTATTTCACACGA+GGG - Chr4:82438627-82438646 None:intergenic 30.0%
AAAGACATCAGATTTGGCTA+AGG + Chr4:82439158-82439177 MsG0480023236.01.T01:CDS 35.0%
AAAGCAATTGGTTGGATTAC+TGG + Chr4:82438032-82438051 MsG0480023236.01.T01:CDS 35.0%
AAATCACCGTTGTTGTATCT+AGG - Chr4:82436292-82436311 None:intergenic 35.0%
AAGACATAGCAATCCAACAA+AGG + Chr4:82436511-82436530 MsG0480023236.01.T01:CDS 35.0%
AAGGTTTAAAAGGAAGTTCC+TGG + Chr4:82437348-82437367 MsG0480023236.01.T01:CDS 35.0%
AATGTGCTTAGTCTCTTTCT+TGG + Chr4:82435244-82435263 MsG0480023236.01.T01:CDS 35.0%
ACATCAAAAGCTCAACAATG+AGG - Chr4:82439387-82439406 None:intergenic 35.0%
ACCATGGTAAATAGTTACTC+AGG + Chr4:82438892-82438911 MsG0480023236.01.T01:CDS 35.0%
AGAGAATTCATATTAGCACC+CGG - Chr4:82436107-82436126 None:intergenic 35.0%
AGTGCATAGCTTAGGTTTAA+AGG + Chr4:82436226-82436245 MsG0480023236.01.T01:CDS 35.0%
ATACTGTAAACGAGTTACGT+AGG + Chr4:82439436-82439455 MsG0480023236.01.T01:three_prime_UTR 35.0%
ATACTTGTTTATCCCTAGCT+AGG + Chr4:82438721-82438740 MsG0480023236.01.T01:intron 35.0%
ATAGCTTAGGTTTAAAGGCA+GGG + Chr4:82436231-82436250 MsG0480023236.01.T01:CDS 35.0%
ATTCGACGTGATTGATCAAT+GGG + Chr4:82436130-82436149 MsG0480023236.01.T01:CDS 35.0%
CAGAATCAAAAGCAATTGGT+TGG + Chr4:82438024-82438043 MsG0480023236.01.T01:CDS 35.0%
CATCTAAGCAAACTCTCATT+TGG - Chr4:82438321-82438340 None:intergenic 35.0%
CCCTAGTAAATTGCAAGAAA+AGG - Chr4:82436453-82436472 None:intergenic 35.0%
CGACACTTGTACATGAAATA+TGG - Chr4:82438433-82438452 None:intergenic 35.0%
CTCACATGCCTCTATATTAT+TGG - Chr4:82437805-82437824 None:intergenic 35.0%
CTTGAAAGAATCTGTTGGAA+AGG + Chr4:82438077-82438096 MsG0480023236.01.T01:CDS 35.0%
GATAAATAGTTGGCATGTGA+GGG + Chr4:82437842-82437861 MsG0480023236.01.T01:intron 35.0%
GCATGTAGCTCTTAATCTTT+AGG + Chr4:82438452-82438471 MsG0480023236.01.T01:intron 35.0%
GCTAATATGATAGGAGCAAA+AGG + Chr4:82437329-82437348 MsG0480023236.01.T01:CDS 35.0%
GGGAAAATGAGAACTAAGAA+AGG + Chr4:82437963-82437982 MsG0480023236.01.T01:CDS 35.0%
GGTGCTAATATGAATTCTCT+TGG + Chr4:82436107-82436126 MsG0480023236.01.T01:CDS 35.0%
GTAAATACAAAGTTAGGAGC+AGG + Chr4:82436567-82436586 MsG0480023236.01.T01:CDS 35.0%
GTGATAATTTCATATGTGGC+AGG - Chr4:82437747-82437766 None:intergenic 35.0%
GTTCTACATTGCAACTAGTT+TGG + Chr4:82439300-82439319 MsG0480023236.01.T01:exon 35.0%
TAACTCGTTTACAGTATGGT+GGG - Chr4:82439433-82439452 None:intergenic 35.0%
TAAGCAAACTCTCATTTGGT+TGG - Chr4:82438317-82438336 None:intergenic 35.0%
TACGTAACTCGTTTACAGTA+TGG - Chr4:82439437-82439456 None:intergenic 35.0%
TATATCACAGATGACTCTGT+GGG + Chr4:82437671-82437690 MsG0480023236.01.T01:intron 35.0%
TATCCAGGAAAATGCATCAT+AGG - Chr4:82435868-82435887 None:intergenic 35.0%
TCCTGAGTAACTATTTACCA+TGG - Chr4:82438896-82438915 None:intergenic 35.0%
TCTCATTTAACAACATCCAG+TGG - Chr4:82435506-82435525 None:intergenic 35.0%
TCTGATGTCTTTGCATATAC+GGG - Chr4:82439150-82439169 None:intergenic 35.0%
TGATTAATCTCTAGTAGGGT+TGG - Chr4:82437774-82437793 None:intergenic 35.0%
TGCACAGAATCAAAAGCAAT+TGG + Chr4:82438020-82438039 MsG0480023236.01.T01:CDS 35.0%
TTAGCTGCAGCTAATATGAT+AGG + Chr4:82437320-82437339 MsG0480023236.01.T01:CDS 35.0%
TTATATCACAGATGACTCTG+TGG + Chr4:82437670-82437689 MsG0480023236.01.T01:intron 35.0%
TTCAACTTACTATACCTGTG+TGG - Chr4:82437525-82437544 None:intergenic 35.0%
TTCATGGATTTGGAAGTTCA+TGG + Chr4:82439264-82439283 MsG0480023236.01.T01:CDS 35.0%
TTGCAACATATTTCGAAGAC+TGG - Chr4:82437211-82437230 None:intergenic 35.0%
! AAGAAAGGGAGAAGTGTATT+TGG + Chr4:82439095-82439114 MsG0480023236.01.T01:CDS 35.0%
! ATTCCTATGATGCATTTTCC+TGG + Chr4:82435862-82435881 MsG0480023236.01.T01:CDS 35.0%
! CAAATGAGAGTTTGCTTAGA+TGG + Chr4:82438319-82438338 MsG0480023236.01.T01:CDS 35.0%
! CTTCAGTTTAGAACTATGTG+TGG + Chr4:82435688-82435707 MsG0480023236.01.T01:intron 35.0%
! GATCTGGTTCATTATTCTGA+TGG + Chr4:82435537-82435556 MsG0480023236.01.T01:intron 35.0%
! TCATTGTTGAGCTTTTGATG+TGG + Chr4:82439386-82439405 MsG0480023236.01.T01:three_prime_UTR 35.0%
!! CGGCTCATTTTGATATATCA+AGG + Chr4:82437138-82437157 MsG0480023236.01.T01:CDS 35.0%
!! GTAAATTGCTATTTCACACG+AGG - Chr4:82438628-82438647 None:intergenic 35.0%
!! GTCTCTTTCTTGGTTCTATT+TGG + Chr4:82435254-82435273 MsG0480023236.01.T01:CDS 35.0%
!! TCGAGTGTTTTTACAAGAAC+AGG - Chr4:82436920-82436939 None:intergenic 35.0%
!!! GTGAGCCATCAAACTTTTTT+TGG + Chr4:82437820-82437839 MsG0480023236.01.T01:intron 35.0%
AAATCTCCCCTTATGTTTGG+AGG + Chr4:82437702-82437721 MsG0480023236.01.T01:intron 40.0%
AATGCAAGGGACGATATTCA+TGG + Chr4:82439248-82439267 MsG0480023236.01.T01:CDS 40.0%
AATTCCTGGATTTGACTCCA+AGG - Chr4:82435597-82435616 None:intergenic 40.0%
ACTATTTACCATGGTCCCAT+TGG - Chr4:82438887-82438906 None:intergenic 40.0%
AGACGAATCAATTTCTGCCA+CGG + Chr4:82439192-82439211 MsG0480023236.01.T01:CDS 40.0%
AGGGACGATATTCATGGATT+TGG + Chr4:82439254-82439273 MsG0480023236.01.T01:CDS 40.0%
ATACATTCATTAGGCCTCAC+TGG + Chr4:82437996-82438015 MsG0480023236.01.T01:CDS 40.0%
ATACCTCATATCCATGCACA+CGG - Chr4:82435941-82435960 None:intergenic 40.0%
ATGTATCATGAGGACTATCG+CGG + Chr4:82438271-82438290 MsG0480023236.01.T01:CDS 40.0%
ATTAGCACACAAGCTGTGAT+TGG + Chr4:82436254-82436273 MsG0480023236.01.T01:CDS 40.0%
CAATCTGCAAGGAGAAAATG+TGG - Chr4:82438386-82438405 None:intergenic 40.0%
CATAGCTTAGGTTTAAAGGC+AGG + Chr4:82436230-82436249 MsG0480023236.01.T01:CDS 40.0%
CCCTATCCTAGATACAACAA+CGG + Chr4:82436283-82436302 MsG0480023236.01.T01:CDS 40.0%
CGAGATAAGCTATGTATCTG+AGG + Chr4:82436855-82436874 MsG0480023236.01.T01:CDS 40.0%
CGTTGTTCATGGATGTCTAA+TGG + Chr4:82436534-82436553 MsG0480023236.01.T01:CDS 40.0%
GAGAATTCATATTAGCACCC+GGG - Chr4:82436106-82436125 None:intergenic 40.0%
GATTAATCTTGCTGAGAACC+TGG - Chr4:82436995-82437014 None:intergenic 40.0%
GATTCGACGTGATTGATCAA+TGG + Chr4:82436129-82436148 MsG0480023236.01.T01:CDS 40.0%
GCAAAATCTCCCCTTATGTT+TGG + Chr4:82437699-82437718 MsG0480023236.01.T01:intron 40.0%
GGATAAATAGTTGGCATGTG+AGG + Chr4:82437841-82437860 MsG0480023236.01.T01:intron 40.0%
GGATCAGTTAACCATCCAAA+TGG - Chr4:82437391-82437410 None:intergenic 40.0%
GTAACTCGTTTACAGTATGG+TGG - Chr4:82439434-82439453 None:intergenic 40.0%
GTCAACATGTATCGCATAAC+AGG + Chr4:82437086-82437105 MsG0480023236.01.T01:CDS 40.0%
GTGAAACATGACTGTGTGTT+TGG + Chr4:82436814-82436833 MsG0480023236.01.T01:CDS 40.0%
TCATAGGAATTCCAACCTCT+TGG - Chr4:82435852-82435871 None:intergenic 40.0%
TCTAGAAGAGAAAAGGACAC+AGG + Chr4:82437545-82437564 MsG0480023236.01.T01:CDS 40.0%
TGATTTGAGTCCAATCTGCA+AGG - Chr4:82438397-82438416 None:intergenic 40.0%
TGGAGAGACTATGTATCATG+AGG + Chr4:82438261-82438280 MsG0480023236.01.T01:CDS 40.0%
TGTGCAGCAAATGTAGTTTC+AGG + Chr4:82439045-82439064 MsG0480023236.01.T01:intron 40.0%
TTCGACGTGATTGATCAATG+GGG + Chr4:82436131-82436150 MsG0480023236.01.T01:CDS 40.0%
TTGCAGATTGGACTCAAATC+AGG + Chr4:82438396-82438415 MsG0480023236.01.T01:CDS 40.0%
TTTGGATGGTTAACTGATCC+AGG + Chr4:82437391-82437410 MsG0480023236.01.T01:intron 40.0%
! ACATTGTCATAGTTTGCCAC+TGG + Chr4:82435487-82435506 MsG0480023236.01.T01:intron 40.0%
! ACCGTTGTTGTATCTAGGAT+AGG - Chr4:82436287-82436306 None:intergenic 40.0%
! ATGTAGTTTCAGGTGGGATT+CGG + Chr4:82439055-82439074 MsG0480023236.01.T01:CDS 40.0%
! CACATTTTCTCCTTGCAGAT+TGG + Chr4:82438384-82438403 MsG0480023236.01.T01:CDS 40.0%
! CAGCAAATGTAGTTTCAGGT+GGG + Chr4:82439049-82439068 MsG0480023236.01.T01:intron 40.0%
! CCGTTGTTGTATCTAGGATA+GGG - Chr4:82436286-82436305 None:intergenic 40.0%
! CCTATTTTGTTGCCTAGCTA+GGG - Chr4:82438736-82438755 None:intergenic 40.0%
! CGTTGTTGTATCTAGGATAG+GGG - Chr4:82436285-82436304 None:intergenic 40.0%
! GCTAAGAAAGTGCATAGCTT+AGG + Chr4:82436218-82436237 MsG0480023236.01.T01:CDS 40.0%
!! AGAAATTGATTCGTCTGCCA+GGG - Chr4:82439188-82439207 None:intergenic 40.0%
!! TATTTGGCTTCTGGTTTCAG+AGG + Chr4:82435270-82435289 MsG0480023236.01.T01:CDS 40.0%
!! TCTTGGTTCTATTTGGCTTC+TGG + Chr4:82435261-82435280 MsG0480023236.01.T01:CDS 40.0%
AAATGGAGCATGTCCATGTC+AGG - Chr4:82437374-82437393 None:intergenic 45.0%
AAGAACGTCGCAACAATGCA+AGG + Chr4:82439234-82439253 MsG0480023236.01.T01:CDS 45.0%
ACATCGCCTCCAAACATAAG+GGG - Chr4:82437711-82437730 None:intergenic 45.0%
ACGTGATTGATCAATGGGGA+AGG + Chr4:82436135-82436154 MsG0480023236.01.T01:CDS 45.0%
ACTGAATCCATTTCCACCTC+TGG - Chr4:82436192-82436211 None:intergenic 45.0%
AGAACGTCGCAACAATGCAA+GGG + Chr4:82439235-82439254 MsG0480023236.01.T01:CDS 45.0%
ATCAAGAACTCGGTCGAGTA+TGG + Chr4:82436481-82436500 MsG0480023236.01.T01:CDS 45.0%
ATCATACGACATGTCATGCC+AGG + Chr4:82436974-82436993 MsG0480023236.01.T01:intron 45.0%
ATCGCATAACAGGAGATGAC+TGG + Chr4:82437096-82437115 MsG0480023236.01.T01:CDS 45.0%
ATGGACATGCTCCATTTGGA+TGG + Chr4:82437377-82437396 MsG0480023236.01.T01:CDS 45.0%
ATTCGGTCTTGGATTGCAAC+GGG + Chr4:82439072-82439091 MsG0480023236.01.T01:CDS 45.0%
ATTTGGGAGCTACACTCCAA+TGG + Chr4:82438868-82438887 MsG0480023236.01.T01:CDS 45.0%
CACATCGCCTCCAAACATAA+GGG - Chr4:82437712-82437731 None:intergenic 45.0%
CCCTAGCTAGGCAACAAAAT+AGG + Chr4:82438733-82438752 MsG0480023236.01.T01:intron 45.0%
CTATCGCGGGAAACATCATT+TGG + Chr4:82438285-82438304 MsG0480023236.01.T01:CDS 45.0%
CTCTCTTGTGTACGCAGAAA+GGG - Chr4:82438127-82438146 None:intergenic 45.0%
GATTGATCAATGGGGAAGGA+TGG + Chr4:82436139-82436158 MsG0480023236.01.T01:CDS 45.0%
GCAGCAAATGTAGTTTCAGG+TGG + Chr4:82439048-82439067 MsG0480023236.01.T01:intron 45.0%
GCTAGGCAACAAAATAGGCT+TGG + Chr4:82438738-82438757 MsG0480023236.01.T01:intron 45.0%
GTTAACTGATCCAGGTGATG+AGG + Chr4:82437399-82437418 MsG0480023236.01.T01:intron 45.0%
TAGGAATTCCAACCTCTTGG+TGG - Chr4:82435849-82435868 None:intergenic 45.0%
TCCATGAACAACGCCTTTGT+TGG - Chr4:82436527-82436546 None:intergenic 45.0%
TCGCATAACAGGAGATGACT+GGG + Chr4:82437097-82437116 MsG0480023236.01.T01:CDS 45.0%
TCTCTCTTGTGTACGCAGAA+AGG - Chr4:82438128-82438147 None:intergenic 45.0%
TGACATGGACATGCTCCATT+TGG + Chr4:82437373-82437392 MsG0480023236.01.T01:CDS 45.0%
TGGATTGCAACGGGAAGAAA+GGG + Chr4:82439081-82439100 MsG0480023236.01.T01:CDS 45.0%
TGTATCATGAGGACTATCGC+GGG + Chr4:82438272-82438291 MsG0480023236.01.T01:CDS 45.0%
TGTGGCTCTCTTCAACTCTT+TGG - Chr4:82438368-82438387 None:intergenic 45.0%
TTATGTTTGGAGGCGATGTG+CGG + Chr4:82437712-82437731 MsG0480023236.01.T01:intron 45.0%
TTCATGAGCAGTATGCTGCT+TGG + Chr4:82436610-82436629 MsG0480023236.01.T01:CDS 45.0%
TTCTTCGAGCTCGTGACATA+AGG - Chr4:82437915-82437934 None:intergenic 45.0%
TTGAGATTTGCGGGTTCAAC+TGG + Chr4:82438818-82438837 MsG0480023236.01.T01:intron 45.0%
TTGGATTGCAACGGGAAGAA+AGG + Chr4:82439080-82439099 MsG0480023236.01.T01:CDS 45.0%
TTTGGGAGCTACACTCCAAT+GGG + Chr4:82438869-82438888 MsG0480023236.01.T01:CDS 45.0%
! ATGTTGTCGTCGATTACCTC+TGG + Chr4:82436066-82436085 MsG0480023236.01.T01:CDS 45.0%
! GATTCGGTCTTGGATTGCAA+CGG + Chr4:82439071-82439090 MsG0480023236.01.T01:CDS 45.0%
! GATTTGGCTAAGGTTTTCCC+TGG + Chr4:82439168-82439187 MsG0480023236.01.T01:CDS 45.0%
! GCCTATTTTGTTGCCTAGCT+AGG - Chr4:82438737-82438756 None:intergenic 45.0%
! GTAAGAGGTGTGTTGTGTGA+TGG + Chr4:82435185-82435204 MsG0480023236.01.T01:five_prime_UTR 45.0%
! GTTGAGCTTTTGATGTGGTG+AGG + Chr4:82439391-82439410 MsG0480023236.01.T01:three_prime_UTR 45.0%
! TCATGAGCAGTATGCTGCTT+GGG + Chr4:82436611-82436630 MsG0480023236.01.T01:CDS 45.0%
! TCATTTTGGACCAAGGTCCT+TGG + Chr4:82435577-82435596 MsG0480023236.01.T01:intron 45.0%
! TCGTCGATTACCTCTGGTAT+AGG + Chr4:82436072-82436091 MsG0480023236.01.T01:CDS 45.0%
!! CAGAAATTGATTCGTCTGCC+AGG - Chr4:82439189-82439208 None:intergenic 45.0%
!! GGTGCTGCTTATCAAGAACT+CGG + Chr4:82436471-82436490 MsG0480023236.01.T01:CDS 45.0%
!! TCCAACAAAGGCGTTGTTCA+TGG + Chr4:82436523-82436542 MsG0480023236.01.T01:CDS 45.0%
!!! TTTTTTTTTTTTTAATTTGT+AGG + Chr4:82437486-82437505 MsG0480023236.01.T01:intron 5.0%
AAGGCCACCTTACTGGATCA+GGG - Chr4:82436166-82436185 None:intergenic 50.0%
ACAGATGACTCTGTGGGCTT+TGG + Chr4:82437677-82437696 MsG0480023236.01.T01:intron 50.0%
AGATGACTGGGATACATGGC+AGG + Chr4:82437109-82437128 MsG0480023236.01.T01:CDS 50.0%
AGGTCCTTGGAGTCAAATCC+AGG + Chr4:82435590-82435609 MsG0480023236.01.T01:intron 50.0%
CAAGTAAGCTTGCCACCAAG+AGG + Chr4:82435834-82435853 MsG0480023236.01.T01:CDS 50.0%
CACTCCACACTTCTTTACCG+TGG - Chr4:82439212-82439231 None:intergenic 50.0%
CAGGAGATGACTGGGATACA+TGG + Chr4:82437105-82437124 MsG0480023236.01.T01:CDS 50.0%
CCTTCTTCCAGAGGTGGAAA+TGG + Chr4:82436182-82436201 MsG0480023236.01.T01:CDS 50.0%
CTGGTATAGGAAGAACGTCC+CGG + Chr4:82436085-82436104 MsG0480023236.01.T01:CDS 50.0%
CTGTGTGTTTGGCGAGAACT+TGG + Chr4:82436825-82436844 MsG0480023236.01.T01:CDS 50.0%
GCACATCGCCTCCAAACATA+AGG - Chr4:82437713-82437732 None:intergenic 50.0%
GGACGTTCTTCCTATACCAG+AGG - Chr4:82436085-82436104 None:intergenic 50.0%
GGATACATGGCAGGATGTAG+CGG + Chr4:82437118-82437137 MsG0480023236.01.T01:CDS 50.0%
GGATTTGACTCCAAGGACCT+TGG - Chr4:82435590-82435609 None:intergenic 50.0%
GTGTGAATGAAGGTCCACAC+AGG + Chr4:82437508-82437527 MsG0480023236.01.T01:CDS 50.0%
TAAGCTTGCCACCAAGAGGT+TGG + Chr4:82435838-82435857 MsG0480023236.01.T01:CDS 50.0%
TCTCCGTGTGCATGGATATG+AGG + Chr4:82435935-82435954 MsG0480023236.01.T01:CDS 50.0%
TCTGCCACGGTAAAGAAGTG+TGG + Chr4:82439205-82439224 MsG0480023236.01.T01:CDS 50.0%
TGGTATAGGAAGAACGTCCC+GGG + Chr4:82436086-82436105 MsG0480023236.01.T01:CDS 50.0%
TTGATTCTGTGCAGCCAGTG+AGG - Chr4:82438013-82438032 None:intergenic 50.0%
! CACGGTAAAGAAGTGTGGAG+TGG + Chr4:82439210-82439229 MsG0480023236.01.T01:CDS 50.0%
! CATGAGCAGTATGCTGCTTG+GGG + Chr4:82436612-82436631 MsG0480023236.01.T01:CDS 50.0%
! CCATTTCCACCTCTGGAAGA+AGG - Chr4:82436185-82436204 None:intergenic 50.0%
! GACTAGTCCACTGACATCCT+TGG - Chr4:82437069-82437088 None:intergenic 50.0%
! TTTCAGGTGGGATTCGGTCT+TGG + Chr4:82439061-82439080 MsG0480023236.01.T01:CDS 50.0%
!! TGGGGTGTTGATCTTGGTAC+TGG + Chr4:82436630-82436649 MsG0480023236.01.T01:intron 50.0%
AACCAGTGTGACACCAGCCA+TGG + Chr4:82437043-82437062 MsG0480023236.01.T01:CDS 55.0%
AGGAAGTTCCTGGCCTGACA+TGG + Chr4:82437358-82437377 MsG0480023236.01.T01:CDS 55.0%
CTGATCCAGGTGATGAGGCT+CGG + Chr4:82437404-82437423 MsG0480023236.01.T01:intron 55.0%
CTGGAAGAAGGCCACCTTAC+TGG - Chr4:82436173-82436192 None:intergenic 55.0%
GAAGGCCACCTTACTGGATC+AGG - Chr4:82436167-82436186 None:intergenic 55.0%
GCTACACTCCAATGGGACCA+TGG + Chr4:82438876-82438895 MsG0480023236.01.T01:CDS 55.0%
GGATGGTCCCTGATCCAGTA+AGG + Chr4:82436156-82436175 MsG0480023236.01.T01:CDS 55.0%
GTAAGGTGGCCTTCTTCCAG+AGG + Chr4:82436173-82436192 MsG0480023236.01.T01:CDS 55.0%
TCCACTGACATCCTTGGCCA+TGG - Chr4:82437063-82437082 None:intergenic 55.0%
TGGTCCCTGATCCAGTAAGG+TGG + Chr4:82436159-82436178 MsG0480023236.01.T01:CDS 55.0%
!! GCTGCTTGGGGTGTTGATCT+TGG + Chr4:82436624-82436643 MsG0480023236.01.T01:CDS 55.0%
AGCAACCGAGCCTCATCACC+TGG - Chr4:82437412-82437431 None:intergenic 60.0%
AGGTGGCCTTCTTCCAGAGG+TGG + Chr4:82436176-82436195 MsG0480023236.01.T01:CDS 60.0%
CTGACATCCTTGGCCATGGC+TGG - Chr4:82437059-82437078 None:intergenic 60.0%
GAGCATGTCCATGTCAGGCC+AGG - Chr4:82437369-82437388 None:intergenic 60.0%
GCCATGGCCAAGGATGTCAG+TGG + Chr4:82437059-82437078 MsG0480023236.01.T01:CDS 60.0%
TCTCAGCGTCTCCGTGTGCA+TGG + Chr4:82435927-82435946 MsG0480023236.01.T01:CDS 60.0%
TGTGACACCAGCCATGGCCA+AGG + Chr4:82437049-82437068 MsG0480023236.01.T01:CDS 60.0%
TGTTTGGAGGCGATGTGCGG+AGG + Chr4:82437715-82437734 MsG0480023236.01.T01:intron 60.0%
!! GCTGGTGTCACACTGGTTCC+AGG - Chr4:82437041-82437060 None:intergenic 60.0%
!! GGCCATGGCTGGTGTCACAC+TGG - Chr4:82437048-82437067 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 82435010 82439564 82435010 ID=MsG0480023236.01;Name=MsG0480023236.01
Chr4 mRNA 82435010 82439564 82435010 ID=MsG0480023236.01.T01;Parent=MsG0480023236.01;Name=MsG0480023236.01.T01;_AED=0.48;_eAED=0.50;_QI=220|0.63|0.75|1|0.81|0.83|12|247|624
Chr4 exon 82435010 82435291 82435010 ID=MsG0480023236.01.T01:exon:5695;Parent=MsG0480023236.01.T01
Chr4 exon 82435797 82435956 82435797 ID=MsG0480023236.01.T01:exon:5696;Parent=MsG0480023236.01.T01
Chr4 exon 82436065 82436367 82436065 ID=MsG0480023236.01.T01:exon:5697;Parent=MsG0480023236.01.T01
Chr4 exon 82436471 82436645 82436471 ID=MsG0480023236.01.T01:exon:5698;Parent=MsG0480023236.01.T01
Chr4 exon 82436764 82436876 82436764 ID=MsG0480023236.01.T01:exon:5699;Parent=MsG0480023236.01.T01
Chr4 exon 82436996 82437159 82436996 ID=MsG0480023236.01.T01:exon:5700;Parent=MsG0480023236.01.T01
Chr4 exon 82437316 82437398 82437316 ID=MsG0480023236.01.T01:exon:5701;Parent=MsG0480023236.01.T01
Chr4 exon 82437508 82437566 82437508 ID=MsG0480023236.01.T01:exon:5702;Parent=MsG0480023236.01.T01
Chr4 exon 82437909 82438162 82437909 ID=MsG0480023236.01.T01:exon:5703;Parent=MsG0480023236.01.T01
Chr4 exon 82438258 82438417 82438258 ID=MsG0480023236.01.T01:exon:5704;Parent=MsG0480023236.01.T01
Chr4 exon 82438868 82438943 82438868 ID=MsG0480023236.01.T01:exon:5705;Parent=MsG0480023236.01.T01
Chr4 exon 82439052 82439564 82439052 ID=MsG0480023236.01.T01:exon:5706;Parent=MsG0480023236.01.T01
Chr4 five_prime_UTR 82435010 82435229 82435010 ID=MsG0480023236.01.T01:five_prime_utr;Parent=MsG0480023236.01.T01
Chr4 CDS 82435230 82435291 82435230 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82435797 82435956 82435797 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82436065 82436367 82436065 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82436471 82436645 82436471 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82436764 82436876 82436764 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82436996 82437159 82436996 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82437316 82437398 82437316 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82437508 82437566 82437508 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82437909 82438162 82437909 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82438258 82438417 82438258 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82438868 82438943 82438868 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 CDS 82439052 82439317 82439052 ID=MsG0480023236.01.T01:cds;Parent=MsG0480023236.01.T01
Chr4 three_prime_UTR 82439318 82439564 82439318 ID=MsG0480023236.01.T01:three_prime_utr;Parent=MsG0480023236.01.T01
Gene Sequence

>MsG0480023236.01.T01

ATGAAGTGTTTCACAATGTGCTTAGTCTCTTTCTTGGTTCTATTTGGCTTCTGGTTTCAGAGTGTGTCATCAAGAAATTTATCTGAGAGTAACATACAGCAAGTAAGCTTGCCACCAAGAGGTTGGAATTCCTATGATGCATTTTCCTGGATAATTTCTGAACAAGAATTCTTACAGAATGCTGAAATTGTTTCTCAGCGTCTCCGTGTGCATGGATATGAGTATGTTGTCGTCGATTACCTCTGGTATAGGAAGAACGTCCCGGGTGCTAATATGAATTCTCTTGGATTCGACGTGATTGATCAATGGGGAAGGATGGTCCCTGATCCAGTAAGGTGGCCTTCTTCCAGAGGTGGAAATGGATTCAGTAAAGTAGCTAAGAAAGTGCATAGCTTAGGTTTAAAGGCAGGGATTAGCACACAAGCTGTGATTGGAAACACCCCTATCCTAGATACAACAACGGTGATTTTTTTATTTTCTGCTATAACTTTATCTTCTATTTATTTATGTATTATAAATTCACAAGGTGCTGCTTATCAAGAACTCGGTCGAGTATGGTATGCAAAAGACATAGCAATCCAACAAAGGCGTTGTTCATGGATGTCTAATGGTTTCATGAGTGTAAATACAAAGTTAGGAGCAGGAAGAGCTTTTTTGAGATCTCTTCATGAGCAGTATGCTGCTTGGGGTGTTGATCTTGTTCTGCCTATGCTTTGCAGTAATTTTGAAAGATTTTATGACTTTCTTTCAGTGAAACATGACTGTGTGTTTGGCGAGAACTTGGATTTAAACGAGATAAGCTATGTATCTGAGGTTCTCAGCAAGATTAATCGCCCCTTTGTGTATTCTTTATCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATCGCATAACAGGAGATGACTGGGATACATGGCAGGATGTAGCGGCTCATTTTGATATATCAAGGGACTTAGCTGCAGCTAATATGATAGGAGCAAAAGGTTTAAAAGGAAGTTCCTGGCCTGACATGGACATGCTCCATTTGGATGGTGTGAATGAAGGTCCACACAGGTATAGTAAGTTGAATCTAGAAGAGAAAAGGACACAGTTTCCTTATGTCACGAGCTCGAAGAACTTGAAGAATGAATATCAGCAACGTATAGGGAAAATGAGAACTAAGAAAGGGGAGAAACAGATACATTCATTAGGCCTCACTGGCTGCACAGAATCAAAAGCAATTGGTTGGATTACTGGAAATCAAAGTCTTAACGAAGATCTTGAAAGAATCTGTTGGAAAGGGAGTGCAGAACACTTGCATCAGAACCCTTTCTGCGTACACAAGAGAGAACTTCCATTGAAATTAGATGGAGAGACTATGTATCATGAGGACTATCGCGGGAAACATCATTTGGTTGCAACCAACCAAATGAGAGTTTGCTTAGATGGTTCTACAAAACGAAAAGTTACTTCCAAAGAGTTGAAGAGAGCCACATTTTCTCCTTGCAGATTGGACTCAAATCAGATTTGGGAGCTACACTCCAATGGGACCATGGTAAATAGTTACTCAGGACTTTGTGCAACAGTAAAGTATATAGAAGCAAATGTAGTTTCAGGTGGGATTCGGTCTTGGATTGCAACGGGAAGAAAGGGAGAAGTGTATTTGGCTTTCTTCAATCTAAATGAACAGAAGACACCCGTATATGCAAAGACATCAGATTTGGCTAAGGTTTTCCCTGGCAGACGAATCAATTTCTGCCACGGTAAAGAAGTGTGGAGTGGAAAGAACGTCGCAACAATGCAAGGGACGATATTCATGGATTTGGAAGTTCATGGATGTGCACTATTTGTTCTACATTGCAACTAG
Protein sequence

>MsG0480023236.01.T01

MKCFTMCLVSFLVLFGFWFQSVSSRNLSESNIQQVSLPPRGWNSYDAFSWIISEQEFLQNAEIVSQRLRVHGYEYVVVDYLWYRKNVPGANMNSLGFDVIDQWGRMVPDPVRWPSSRGGNGFSKVAKKVHSLGLKAGISTQAVIGNTPILDTTTVIFLFSAITLSSIYLCIINSQGAAYQELGRVWYAKDIAIQQRRCSWMSNGFMSVNTKLGAGRAFLRSLHEQYAAWGVDLVLPMLCSNFERFYDFLSVKHDCVFGENLDLNEISYVSEVLSKINRPFVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDTWQDVAAHFDISRDLAAANMIGAKGLKGSSWPDMDMLHLDGVNEGPHRYSKLNLEEKRTQFPYVTSSKNLKNEYQQRIGKMRTKKGEKQIHSLGLTGCTESKAIGWITGNQSLNEDLERICWKGSAEHLHQNPFCVHKRELPLKLDGETMYHEDYRGKHHLVATNQMRVCLDGSTKRKVTSKELKRATFSPCRLDSNQIWELHSNGTMVNSYSGLCATVKYIEANVVSGGIRSWIATGRKGEVYLAFFNLNEQKTPVYAKTSDLAKVFPGRRINFCHGKEVWSGKNVATMQGTIFMDLEVHGCALFVLHCN*