AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023266.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023266.01.T01 MTR_8g090060 77.603 317 26 2 19 324 1 283 3.18e-175 486
MsG0480023266.01.T01 MTR_3g087050 62.379 311 108 1 23 324 7 317 2.38e-144 410
MsG0480023266.01.T01 MTR_2g008880 58.804 301 114 1 22 312 8 308 1.98e-131 377
MsG0480023266.01.T01 MTR_5g064035 55.482 301 123 2 19 308 1 301 8.82e-122 352
MsG0480023266.01.T01 MTR_3g105290 36.486 296 174 5 23 305 6 300 6.89e-59 191
MsG0480023266.01.T01 MTR_3g105290 39.167 240 141 4 23 258 6 244 3.68e-53 175
MsG0480023266.01.T01 MTR_5g020250 35.154 293 154 8 40 305 19 302 3.52e-46 159
MsG0480023266.01.T01 MTR_5g020260 34.539 304 165 10 41 319 20 314 4.62e-46 159
MsG0480023266.01.T01 MTR_5g020320 32.414 290 170 7 35 305 14 296 1.29e-43 152
MsG0480023266.01.T01 MTR_8g077290 29.655 290 177 6 40 305 19 305 3.04e-38 138
MsG0480023266.01.T01 MTR_8g077290 29.688 256 150 6 40 279 19 260 2.10e-32 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023266.01.T01 AT5G09430 63.787 301 95 3 22 308 10 310 1.67e-139 397
MsG0480023266.01.T01 AT4G39955 55.272 313 130 2 19 321 1 313 1.74e-129 372
MsG0480023266.01.T01 AT1G78210 43.791 306 156 5 19 309 1 305 2.15e-95 285
MsG0480023266.01.T01 AT5G21950 38.209 335 180 9 1 312 30 360 4.32e-58 191
MsG0480023266.01.T01 AT5G21950 39.189 296 159 6 34 312 17 308 5.29e-58 189
MsG0480023266.01.T01 AT5G21950 42.017 238 126 5 34 263 17 250 2.34e-52 174
MsG0480023266.01.T01 AT5G21950 40.586 239 127 6 1 227 30 265 3.57e-46 157
MsG0480023266.01.T01 AT5G21950 40.586 239 127 6 1 227 30 265 3.57e-46 157
MsG0480023266.01.T01 AT5G21950 42.500 200 106 3 34 227 17 213 6.44e-46 155
MsG0480023266.01.T01 AT5G21950 42.500 200 106 3 34 227 17 213 6.44e-46 155
MsG0480023266.01.T01 AT4G33180 32.993 294 176 8 31 308 19 307 6.48e-46 158
MsG0480023266.01.T01 AT2G18360 32.302 291 169 6 40 305 19 306 8.29e-45 155
MsG0480023266.01.T01 AT1G72620 33.096 281 168 8 42 306 56 332 1.01e-42 150
MsG0480023266.01.T01 AT1G17430 32.986 288 165 8 42 308 52 332 6.27e-42 148
MsG0480023266.01.T01 AT4G33180 37.438 203 116 6 31 227 19 216 3.83e-39 138
MsG0480023266.01.T01 AT2G18360 32.500 240 142 5 40 262 19 255 1.33e-37 135
MsG0480023266.01.T01 AT4G36610 28.028 289 182 6 40 305 19 304 2.96e-33 125

Find 113 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTGGGTTTGTGGGATT+TGG 0.179732 4:+82916787 None:intergenic
TAGTTTGGCGGCGTTGTTTC+CGG 0.192114 4:-82916519 MsG0480023266.01.T01:CDS
GAAAATCTCTATAATTTCTA+TGG 0.216387 4:+82912600 None:intergenic
TCTTCTGGTTTGTAGGCATC+TGG 0.242389 4:-82912787 MsG0480023266.01.T01:intron
TTGGTGGGTTTGTGGGATTT+GGG 0.272326 4:+82916788 None:intergenic
TTGTTTGGAAGATAAGGATA+TGG 0.312463 4:-82916459 MsG0480023266.01.T01:CDS
GAGAAGGAGGAGAGAGGGTT+TGG 0.314858 4:+82916769 None:intergenic
AGAGGGTTTGGTGGGTTTGT+GGG 0.322648 4:+82916781 None:intergenic
TTTCTTCTCCTGTCGGTATT+CGG 0.331426 4:+82913295 None:intergenic
GAGAGGGTTTGGTGGGTTTG+TGG 0.332545 4:+82916780 None:intergenic
TTGTTTGTAGAGTAGCATTA+TGG 0.338801 4:-82912237 MsG0480023266.01.T01:three_prime_UTR
AAGATAAACCTGGGTTATCT+TGG 0.346031 4:+82913226 None:intergenic
AAAGTTGTGTTGTGTTGTGC+TGG 0.349906 4:-82916485 MsG0480023266.01.T01:CDS
AACAAGCTGCTTCATCTTCT+CGG 0.355339 4:+82916373 None:intergenic
ATGATGTAGAATGTGAAGTT+TGG 0.367874 4:-82912507 MsG0480023266.01.T01:three_prime_UTR
TTCTGTTCGATCAGGTTTAG+AGG 0.371674 4:+82916637 None:intergenic
GTTCCTGATCTTCTCTTCTT+CGG 0.378141 4:-82916671 MsG0480023266.01.T01:CDS
AAAATCTTAGACAGTTCCTT+TGG 0.379092 4:+82912705 None:intergenic
TCAGTGTGTTGCTGCTCTTA+TGG 0.390166 4:-82916603 MsG0480023266.01.T01:CDS
CCACTATAAACTCATAATTC+AGG 0.396732 4:-82912395 MsG0480023266.01.T01:three_prime_UTR
AGGAGGAGAGAGGGTTTGGT+GGG 0.401472 4:+82916773 None:intergenic
AAGGAGGAGAGAGGGTTTGG+TGG 0.414237 4:+82916772 None:intergenic
GTGTTGTGCTGGGGTTTGTT+TGG 0.417818 4:-82916474 MsG0480023266.01.T01:CDS
TTGCTAAGGAACCCTCGAAC+AGG 0.418177 4:-82912345 MsG0480023266.01.T01:three_prime_UTR
TGATCCGTAAAACCTCTTTA+CGG 0.418182 4:+82912419 None:intergenic
TGAAAAGATTCTGTTCGATC+AGG 0.426236 4:+82916629 None:intergenic
AAGTTGTGTTGTGTTGTGCT+GGG 0.434351 4:-82916484 MsG0480023266.01.T01:CDS
TGGGGTTTGTTTGGAAGATA+AGG 0.440956 4:-82916465 MsG0480023266.01.T01:CDS
TGGTCGCAAACTTGATTAGC+AGG 0.441830 4:-82912628 MsG0480023266.01.T01:exon
CTAGTTGTTGTTAAGAATGC+AGG 0.443780 4:-82912750 MsG0480023266.01.T01:CDS
ACACCACCATCATGCACTGC+TGG 0.446498 4:-82916814 MsG0480023266.01.T01:CDS
ATGTGAAGTTTGGGAAAAGA+TGG 0.455676 4:-82912497 MsG0480023266.01.T01:three_prime_UTR
CTTCTGGTTTGTAGGCATCT+GGG 0.456425 4:-82912786 MsG0480023266.01.T01:intron
TCCTTTGAATGGCAGAAGAT+GGG 0.458171 4:+82912455 None:intergenic
ATCCTTTGAATGGCAGAAGA+TGG 0.461467 4:+82912454 None:intergenic
ACAAGCTGCTTCATCTTCTC+GGG 0.462957 4:+82916374 None:intergenic
TCTCCTCCTTCTCCACGGCA+TGG 0.465966 4:-82916759 MsG0480023266.01.T01:CDS
TGATGTAGAATGTGAAGTTT+GGG 0.466992 4:-82912506 MsG0480023266.01.T01:three_prime_UTR
CTCCTCCTTCTCCACGGCAT+GGG 0.467665 4:-82916758 MsG0480023266.01.T01:CDS
CCTGAATTATGAGTTTATAG+TGG 0.468183 4:+82912395 None:intergenic
AGATAAACCTGGGTTATCTT+GGG 0.471968 4:+82913227 None:intergenic
AATGTTGTTGGTGTTAGTTA+TGG 0.472679 4:-82916557 MsG0480023266.01.T01:CDS
GTTGTTGGTGTTAGTTATGG+TGG 0.479923 4:-82916554 MsG0480023266.01.T01:CDS
TCACCGAAGAAGAGAAGATC+AGG 0.489338 4:+82916668 None:intergenic
GGGAAAAGATGGTTCTCTGC+AGG 0.490848 4:-82912486 MsG0480023266.01.T01:three_prime_UTR
ACAACTTTCTCCACTCTCTC+CGG 0.498587 4:+82916500 None:intergenic
TAGCTCCCATGCCGTGGAGA+AGG 0.501845 4:+82916753 None:intergenic
CGTTTCTCCTTCTCTAACGC+CGG 0.504764 4:-82916866 MsG0480023266.01.T01:CDS
AAATCAACCACCACCGATCT+CGG 0.512770 4:-82916839 MsG0480023266.01.T01:CDS
TTAGTTCTTTCTTCTCCTGT+CGG 0.519266 4:+82913288 None:intergenic
GAAGATAAGGATATGGAGGA+TGG 0.523262 4:-82916452 MsG0480023266.01.T01:CDS
AATAAAAGAGAAGATAAACC+TGG 0.527585 4:+82913216 None:intergenic
TTCTTGCATTGGTAGAGTAG+TGG 0.527707 4:+82912662 None:intergenic
AGTAGTGGAATCTATGAGGA+AGG 0.531059 4:+82912677 None:intergenic
TATGGAGGATGGACTGTTTG+TGG 0.531543 4:-82916441 MsG0480023266.01.T01:CDS
CAAGCCGGCATAACTTTGAA+AGG 0.535644 4:+82916332 None:intergenic
ACACTCTCTGTGAACATGGC+GGG 0.538157 4:-82916926 MsG0480023266.01.T01:CDS
TTTGGAAGATAAGGATATGG+AGG 0.540127 4:-82916456 MsG0480023266.01.T01:CDS
TAAGCCTTTCAAAGTTATGC+CGG 0.540913 4:-82916336 MsG0480023266.01.T01:CDS
CCCCATCTTCTGCCATTCAA+AGG 0.542624 4:-82912456 MsG0480023266.01.T01:three_prime_UTR
TCGCACACTCTCTGTGAACA+TGG 0.544610 4:-82916930 MsG0480023266.01.T01:CDS
CCGTGGAGAAGGAGGAGAGA+GGG 0.545679 4:+82916764 None:intergenic
GATGGTGGTGTTGCCGAGAT+CGG 0.548748 4:+82916826 None:intergenic
GTGAGGAGAATGAATGTTGT+TGG 0.554086 4:-82916569 MsG0480023266.01.T01:CDS
AAAATCTCTATAATTTCTAT+GGG 0.555902 4:+82912601 None:intergenic
TTTGAGACCGGCGTTAGAGA+AGG 0.556163 4:+82916859 None:intergenic
CACCACCATCATGCACTGCT+GGG 0.557735 4:-82916813 MsG0480023266.01.T01:CDS
GTAGAGTAGTGGAATCTATG+AGG 0.557739 4:+82912673 None:intergenic
CTCCCATGCCGTGGAGAAGG+AGG 0.562988 4:+82916756 None:intergenic
GCTGATCTACATCCTTTGAA+TGG 0.564791 4:+82912444 None:intergenic
GTAGATCAGCATCCGTAAAG+AGG 0.570056 4:-82912431 MsG0480023266.01.T01:three_prime_UTR
AACATAGAGGTTGAAACGAC+GGG 0.570772 4:+82916691 None:intergenic
TGCAAACGCAAATATTGCTA+AGG 0.572292 4:-82912359 MsG0480023266.01.T01:three_prime_UTR
TTCATCTTCTCGGGAGTCTG+CGG 0.573600 4:+82916383 None:intergenic
GGTGTTGCCGAGATCGGTGG+TGG 0.574242 4:+82916832 None:intergenic
AGGTTGAAACGACGGGTGAG+TGG 0.576505 4:+82916698 None:intergenic
ATATGTGTAATCCCTGTTCG+AGG 0.578410 4:+82912333 None:intergenic
GGCGTTGTTTCCGGAGAGAG+TGG 0.581833 4:-82916510 MsG0480023266.01.T01:CDS
TAGTTGTTGTTAAGAATGCA+GGG 0.583297 4:-82912749 MsG0480023266.01.T01:CDS
GGTGGTGGTTGATTTGAGAC+CGG 0.583656 4:+82916847 None:intergenic
GAGCTAATGCAATGTGGCAA+TGG 0.583751 4:-82916736 MsG0480023266.01.T01:CDS
CCTTTGAATGGCAGAAGATG+GGG 0.585720 4:+82912456 None:intergenic
TATGTGTAATCCCTGTTCGA+GGG 0.594224 4:+82912334 None:intergenic
AGAGAAGATCAGGAACATAG+AGG 0.595697 4:+82916678 None:intergenic
ATGCAAGAAAACCTCAGTAA+TGG 0.597283 4:-82912648 MsG0480023266.01.T01:CDS
CCCTCTCTCCTCCTTCTCCA+CGG 0.598715 4:-82916764 MsG0480023266.01.T01:CDS
AGTTGTGTTGTGTTGTGCTG+GGG 0.598794 4:-82916483 MsG0480023266.01.T01:CDS
TTGCATTAGCTCCCATGCCG+TGG 0.608347 4:+82916747 None:intergenic
TTATGGAAGCGCATGGTGTG+AGG 0.612988 4:-82916586 MsG0480023266.01.T01:CDS
ACTAATTGAAACATTATACA+AGG 0.617122 4:-82913270 MsG0480023266.01.T01:CDS
GAAACGGTAACAACGGTCGC+GGG 0.620443 4:+82916883 None:intergenic
GATGTGCACCGAATACCGAC+AGG 0.623132 4:-82913303 MsG0480023266.01.T01:CDS
CGGCGTTAGAGAAGGAGAAA+CGG 0.623381 4:+82916867 None:intergenic
TGCTAAGGAACCCTCGAACA+GGG 0.623465 4:-82912344 MsG0480023266.01.T01:three_prime_UTR
CACACTCTCTGTGAACATGG+CGG 0.631070 4:-82916927 MsG0480023266.01.T01:CDS
AGAAACGGTAACAACGGTCG+CGG 0.631266 4:+82916882 None:intergenic
AAATCAGTGAGAAAGCAAGC+CGG 0.634008 4:+82916317 None:intergenic
GGTGGTGTTGCCGAGATCGG+TGG 0.639185 4:+82916829 None:intergenic
GCCGTGGAGAAGGAGGAGAG+AGG 0.639427 4:+82916763 None:intergenic
TGCAGGGCATGCTATCAACA+TGG 0.642126 4:-82912733 MsG0480023266.01.T01:CDS
GAACATAGAGGTTGAAACGA+CGG 0.643215 4:+82916690 None:intergenic
GTATTGTAAATATTATGAGC+TGG 0.643267 4:-82912310 MsG0480023266.01.T01:three_prime_UTR
ATAAAAGAGAAGATAAACCT+GGG 0.650967 4:+82913217 None:intergenic
TAATCTTCCCAAGATAACCC+AGG 0.651196 4:-82913234 MsG0480023266.01.T01:CDS
CAAGTTTGCGACCATTACTG+AGG 0.652429 4:+82912637 None:intergenic
GCTGCTCTTATGGAAGCGCA+TGG 0.662706 4:-82916593 MsG0480023266.01.T01:CDS
GGTCGCAAACTTGATTAGCA+GGG 0.666684 4:-82912627 MsG0480023266.01.T01:exon
GGGAACCCAGCAGTGCATGA+TGG 0.670913 4:+82916808 None:intergenic
AACCCAGCAGTGCATGATGG+TGG 0.677988 4:+82916811 None:intergenic
AGAAGGAGAAACGGTAACAA+CGG 0.684149 4:+82916876 None:intergenic
TATCAACATGGAGAAGCCAA+AGG 0.707381 4:-82912721 MsG0480023266.01.T01:CDS
GTTGCATAGTAAACACCATG+TGG 0.715199 4:-82912543 MsG0480023266.01.T01:three_prime_UTR
GCATGGGAGCTAATGCAATG+TGG 0.716167 4:-82916742 MsG0480023266.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAATATATAGATAG+CGG - Chr4:82915104-82915123 MsG0480023266.01.T01:intron 10.0%
!!! ATAAACTATTGTTATTATTA+GGG - Chr4:82912931-82912950 MsG0480023266.01.T01:intron 10.0%
!! AAAATCTCTATAATTTCTAT+GGG + Chr4:82916555-82916574 None:intergenic 15.0%
!! AAAGAAGAAATAACTTATTT+AGG + Chr4:82914764-82914783 None:intergenic 15.0%
!! ACAAAAGTAATTAAAAATAG+AGG - Chr4:82913858-82913877 MsG0480023266.01.T01:intron 15.0%
!! TTAATTGTATCTATTAAGAA+CGG + Chr4:82914130-82914149 None:intergenic 15.0%
!!! AATGTTTTTAAATTTTTCGA+TGG - Chr4:82914959-82914978 MsG0480023266.01.T01:intron 15.0%
!!! ATAATTTGATGGTTTATTTA+TGG - Chr4:82913008-82913027 MsG0480023266.01.T01:intron 15.0%
!!! CATAAACTATTGTTATTATT+AGG - Chr4:82912930-82912949 MsG0480023266.01.T01:intron 15.0%
!!! TAAACTATTGTTATTATTAG+GGG - Chr4:82912932-82912951 MsG0480023266.01.T01:intron 15.0%
!! ACTAATTGAAACATTATACA+AGG - Chr4:82915883-82915902 MsG0480023266.01.T01:intron 20.0%
!! AGTAATTAAAAATAGAGGAA+CGG - Chr4:82913863-82913882 MsG0480023266.01.T01:intron 20.0%
!! ATAGATACAATTAACCATAA+TGG - Chr4:82914136-82914155 MsG0480023266.01.T01:intron 20.0%
!! CAAAATACTATTATATCTTG+TGG - Chr4:82915000-82915019 MsG0480023266.01.T01:intron 20.0%
!! GAAAATCTCTATAATTTCTA+TGG + Chr4:82916556-82916575 None:intergenic 20.0%
!! GAATTTCAAAAGATAATTGA+CGG + Chr4:82913615-82913634 None:intergenic 20.0%
!! TAATTGTATCTATTAAGAAC+GGG + Chr4:82914129-82914148 None:intergenic 20.0%
!!! CAATTTTAATTGCTCTAATT+GGG - Chr4:82912905-82912924 MsG0480023266.01.T01:intron 20.0%
!!! CCAATTTTTGTGAAATAAAA+AGG + Chr4:82915803-82915822 None:intergenic 20.0%
!!! CCTTTTTATTTCACAAAAAT+TGG - Chr4:82915800-82915819 MsG0480023266.01.T01:intron 20.0%
!!! TCAATTTTAATTGCTCTAAT+TGG - Chr4:82912904-82912923 MsG0480023266.01.T01:intron 20.0%
!!! TTCTTTATTTCGATAATCTT+TGG - Chr4:82914778-82914797 MsG0480023266.01.T01:intron 20.0%
! AAGAATTGTAGAGAAATGTT+TGG + Chr4:82916151-82916170 None:intergenic 25.0%
! AATAAAAGAGAAGATAAACC+TGG + Chr4:82915940-82915959 None:intergenic 25.0%
! ATAAAAGAGAAGATAAACCT+GGG + Chr4:82915939-82915958 None:intergenic 25.0%
! CACTAGATAATGAATGAATT+TGG - Chr4:82913050-82913069 MsG0480023266.01.T01:intron 25.0%
! CATGATTGATCATAATTTGA+TGG - Chr4:82912997-82913016 MsG0480023266.01.T01:intron 25.0%
! CCTCAATAAATAAAGTGATA+AGG - Chr4:82913829-82913848 MsG0480023266.01.T01:intron 25.0%
! GATTATGTTTGCATAAAAAG+TGG - Chr4:82915525-82915544 MsG0480023266.01.T01:intron 25.0%
! GCTTCATATAAGTGTTATAT+AGG + Chr4:82914818-82914837 None:intergenic 25.0%
! GTATTGTAAATATTATGAGC+TGG - Chr4:82916843-82916862 MsG0480023266.01.T01:CDS 25.0%
! TAGAAAAAATGTGTGGAATT+AGG + Chr4:82914072-82914091 None:intergenic 25.0%
! TAGTTAGTTAAGTTAGACTA+GGG - Chr4:82913131-82913150 MsG0480023266.01.T01:intron 25.0%
! TCAAATTATGATCAATCATG+TGG + Chr4:82912997-82913016 None:intergenic 25.0%
! TCAACTTAGAGATAATAAGT+TGG + Chr4:82913253-82913272 None:intergenic 25.0%
! TCTTATATGTTACCTATCTT+AGG - Chr4:82915594-82915613 MsG0480023266.01.T01:intron 25.0%
! TTACATTTCATTCTTTCTTC+TGG - Chr4:82916351-82916370 MsG0480023266.01.T01:CDS 25.0%
!! CCTTATCACTTTATTTATTG+AGG + Chr4:82913832-82913851 None:intergenic 25.0%
!! TTGATTTGATCAAATCCAAA+AGG - Chr4:82915315-82915334 MsG0480023266.01.T01:intron 25.0%
!! TTTAGGATATAATACAACAC+AGG - Chr4:82914010-82914029 MsG0480023266.01.T01:intron 25.0%
!!! AACCATTTTTGAAATAGAAG+AGG - Chr4:82915645-82915664 MsG0480023266.01.T01:intron 25.0%
!!! GTTTTGAAAAAGAAACAAAG+TGG - Chr4:82916244-82916263 MsG0480023266.01.T01:intron 25.0%
!!! TGTTTCTTTTTCAAAACCTT+GGG + Chr4:82916241-82916260 None:intergenic 25.0%
!!! TTAAATTTTTCGATGGTAGA+TGG - Chr4:82914966-82914985 MsG0480023266.01.T01:intron 25.0%
!!! TTCTATGTTTTTTACGTTAG+CGG - Chr4:82915135-82915154 MsG0480023266.01.T01:intron 25.0%
!!! TTGTTTCTTTTTCAAAACCT+TGG + Chr4:82916242-82916261 None:intergenic 25.0%
AAAATCTTAGACAGTTCCTT+TGG + Chr4:82916451-82916470 None:intergenic 30.0%
AATTACACATGAAGAGAAGA+AGG + Chr4:82913532-82913551 None:intergenic 30.0%
AATTAGCTCACAGATTGAAA+AGG - Chr4:82916097-82916116 MsG0480023266.01.T01:intron 30.0%
ACACAATATGATCATATGAC+AGG + Chr4:82913756-82913775 None:intergenic 30.0%
AGAACTATGAAACACATACA+CGG + Chr4:82915196-82915215 None:intergenic 30.0%
AGCCTCTTCTATTTCAAAAA+TGG + Chr4:82915650-82915669 None:intergenic 30.0%
AGGTAACATATAAGACATTC+AGG + Chr4:82915589-82915608 None:intergenic 30.0%
AGTTAGTTAAGTTAGACTAG+GGG - Chr4:82913132-82913151 MsG0480023266.01.T01:intron 30.0%
ATGATGTAGAATGTGAAGTT+TGG - Chr4:82916646-82916665 MsG0480023266.01.T01:CDS 30.0%
ATGCAAGAAAAAATACCACA+TGG + Chr4:82916628-82916647 None:intergenic 30.0%
ATGTTTGCATAAAAAGTGGA+AGG - Chr4:82915529-82915548 MsG0480023266.01.T01:intron 30.0%
ATTAAAGCAAGAACTTGAAG+TGG + Chr4:82913592-82913611 None:intergenic 30.0%
ATTAGGAAGAATCTGAATTG+TGG + Chr4:82914055-82914074 None:intergenic 30.0%
CAGAAGAGAAGATAAGAAAT+TGG + Chr4:82915229-82915248 None:intergenic 30.0%
CATATTGTGTATAAAGCGAT+TGG - Chr4:82913766-82913785 MsG0480023266.01.T01:intron 30.0%
CCACTATAAACTCATAATTC+AGG - Chr4:82916758-82916777 MsG0480023266.01.T01:CDS 30.0%
CCTGAATTATGAGTTTATAG+TGG + Chr4:82916761-82916780 None:intergenic 30.0%
CTAGTTAGTTAAGTTAGACT+AGG - Chr4:82913130-82913149 MsG0480023266.01.T01:intron 30.0%
GAGAAATATTGATCAATGAG+AGG - Chr4:82914913-82914932 MsG0480023266.01.T01:intron 30.0%
GATAAGAAATTGGATATCAG+TGG + Chr4:82915219-82915238 None:intergenic 30.0%
GATATACAAGTCAATAAAGC+TGG + Chr4:82916219-82916238 None:intergenic 30.0%
GTCAATGTGACTTTCAAATA+GGG - Chr4:82914592-82914611 MsG0480023266.01.T01:intron 30.0%
TATGCTTATCATAAAGCAAG+TGG - Chr4:82914440-82914459 MsG0480023266.01.T01:intron 30.0%
TATTTCGATAATCTTTGGAC+CGG - Chr4:82914783-82914802 MsG0480023266.01.T01:intron 30.0%
TGATGTAGAATGTGAAGTTT+GGG - Chr4:82916647-82916666 MsG0480023266.01.T01:CDS 30.0%
TGCCTATATCGATCTAAAAA+CGG - Chr4:82915694-82915713 MsG0480023266.01.T01:intron 30.0%
TTAGAACATTGAGTTCATGA+AGG - Chr4:82915388-82915407 MsG0480023266.01.T01:intron 30.0%
TTGTTTGGAAGATAAGGATA+TGG - Chr4:82912694-82912713 MsG0480023266.01.T01:CDS 30.0%
TTGTTTGTAGAGTAGCATTA+TGG - Chr4:82916916-82916935 MsG0480023266.01.T01:CDS 30.0%
! TAATATATAGATAGCGGTGT+TGG - Chr4:82915110-82915129 MsG0480023266.01.T01:intron 30.0%
! TAGTTGTTGTTAAGAATGCA+GGG - Chr4:82916404-82916423 MsG0480023266.01.T01:CDS 30.0%
! TGTTTTGTCTCAATCGTAAA+AGG - Chr4:82915460-82915479 MsG0480023266.01.T01:intron 30.0%
!! AACCGTTTTTAGATCGATAT+AGG + Chr4:82915699-82915718 None:intergenic 30.0%
!! AATGTTGTTGGTGTTAGTTA+TGG - Chr4:82912596-82912615 MsG0480023266.01.T01:three_prime_UTR 30.0%
!! CAAAAATTGGTTTCTGAAAC+TGG - Chr4:82915813-82915832 MsG0480023266.01.T01:intron 30.0%
!! TATCTCTAAGTTGATCAATG+AGG - Chr4:82913259-82913278 MsG0480023266.01.T01:CDS 30.0%
!! TTATTGACTTGTATATCCCA+AGG - Chr4:82916222-82916241 MsG0480023266.01.T01:intron 30.0%
!!! ATATCCTCCAAATTTTGACT+CGG - Chr4:82913372-82913391 MsG0480023266.01.T01:intron 30.0%
!!! TCCACACATTTTTTCTATTC+TGG - Chr4:82914075-82914094 MsG0480023266.01.T01:intron 30.0%
!!! TTAGTTATGGTGGTTTTGTT+GGG - Chr4:82912609-82912628 MsG0480023266.01.T01:three_prime_UTR 30.0%
AACACTTATATGAAGCGTGT+CGG - Chr4:82914822-82914841 MsG0480023266.01.T01:intron 35.0%
AAGATAAACCTGGGTTATCT+TGG + Chr4:82915930-82915949 None:intergenic 35.0%
AAGGACAGAGAAAGCAAAAT+TGG + Chr4:82913651-82913670 None:intergenic 35.0%
AAGTCAATAAAGCTGGAGAA+TGG + Chr4:82916212-82916231 None:intergenic 35.0%
ACATTGAGTTCATGAAGGAT+TGG - Chr4:82915393-82915412 MsG0480023266.01.T01:intron 35.0%
AGATAAACCTGGGTTATCTT+GGG + Chr4:82915929-82915948 None:intergenic 35.0%
AGCTCTTTAACAGATTGATG+AGG + Chr4:82913313-82913332 None:intergenic 35.0%
ATCAGCAGACGAGATTAATA+TGG + Chr4:82913469-82913488 None:intergenic 35.0%
ATGACAGGCGAATTAAAGAA+AGG + Chr4:82913741-82913760 None:intergenic 35.0%
ATGCAAGAAAACCTCAGTAA+TGG - Chr4:82916505-82916524 MsG0480023266.01.T01:CDS 35.0%
ATGTGAAGTTTGGGAAAAGA+TGG - Chr4:82916656-82916675 MsG0480023266.01.T01:CDS 35.0%
GAAGACAGAAAACAATAGCT+TGG + Chr4:82913352-82913371 None:intergenic 35.0%
GAATTAAAGAAAGGGGTCAA+GGG + Chr4:82913732-82913751 None:intergenic 35.0%
GCCAGAATAGAAAAAATGTG+TGG + Chr4:82914079-82914098 None:intergenic 35.0%
GGTCAATGTGACTTTCAAAT+AGG - Chr4:82914591-82914610 MsG0480023266.01.T01:intron 35.0%
TAAGCCTTTCAAAGTTATGC+CGG - Chr4:82912817-82912836 MsG0480023266.01.T01:intron 35.0%
TGAAAAGATTCTGTTCGATC+AGG + Chr4:82912527-82912546 None:intergenic 35.0%
TGACAGGCGAATTAAAGAAA+GGG + Chr4:82913740-82913759 None:intergenic 35.0%
TGATCCGTAAAACCTCTTTA+CGG + Chr4:82916737-82916756 None:intergenic 35.0%
TGCAAACGCAAATATTGCTA+AGG - Chr4:82916794-82916813 MsG0480023266.01.T01:CDS 35.0%
TTAAGAGATGCGAATCAAAG+AGG + Chr4:82914301-82914320 None:intergenic 35.0%
TTCTTCATCTAACTCTGACT+CGG + Chr4:82913691-82913710 None:intergenic 35.0%
TTTGGAAGATAAGGATATGG+AGG - Chr4:82912697-82912716 MsG0480023266.01.T01:CDS 35.0%
! ACTGATTTCATTGATGTGAG+TGG - Chr4:82912851-82912870 MsG0480023266.01.T01:intron 35.0%
! AGTGGTTTTTCCTCACTATA+AGG - Chr4:82912869-82912888 MsG0480023266.01.T01:intron 35.0%
! CTAGTTGTTGTTAAGAATGC+AGG - Chr4:82916403-82916422 MsG0480023266.01.T01:CDS 35.0%
! GGATTTGGGTTATTCTTCAA+AGG + Chr4:82913670-82913689 None:intergenic 35.0%
! TGAAATTGAGCCTTATAGTG+AGG + Chr4:82912882-82912901 None:intergenic 35.0%
! TTACTGAGGTTTTCTTGCAT+TGG + Chr4:82916505-82916524 None:intergenic 35.0%
! TTAGTTCTTTCTTCTCCTGT+CGG + Chr4:82915868-82915887 None:intergenic 35.0%
! TTTTGTTGGGTATAGTTTGG+CGG - Chr4:82912622-82912641 MsG0480023266.01.T01:exon 35.0%
!! CATTCTTTCTTCTGGTTTGT+AGG - Chr4:82916359-82916378 MsG0480023266.01.T01:CDS 35.0%
!!! GTTAGTTATGGTGGTTTTGT+TGG - Chr4:82912608-82912627 MsG0480023266.01.T01:three_prime_UTR 35.0%
!!! TGGTTTTGTTGGGTATAGTT+TGG - Chr4:82912619-82912638 MsG0480023266.01.T01:exon 35.0%
AAAGTTGTGTTGTGTTGTGC+TGG - Chr4:82912668-82912687 MsG0480023266.01.T01:CDS 40.0%
AAATCAGTGAGAAAGCAAGC+CGG + Chr4:82912839-82912858 None:intergenic 40.0%
AACAAGCTGCTTCATCTTCT+CGG + Chr4:82912783-82912802 None:intergenic 40.0%
AACATAGAGGTTGAAACGAC+GGG + Chr4:82912465-82912484 None:intergenic 40.0%
AAGTTGTGTTGTGTTGTGCT+GGG - Chr4:82912669-82912688 MsG0480023266.01.T01:CDS 40.0%
AATCTGAATTGTGGAGAGAC+AGG + Chr4:82914046-82914065 None:intergenic 40.0%
AATCTGTGAGCTAATTCCAG+TGG + Chr4:82916093-82916112 None:intergenic 40.0%
AATTAAGCGTGTCACAGTGT+CGG - Chr4:82914680-82914699 MsG0480023266.01.T01:intron 40.0%
AGAAGGAGAAACGGTAACAA+CGG + Chr4:82912280-82912299 None:intergenic 40.0%
AGAGAAGATCAGGAACATAG+AGG + Chr4:82912478-82912497 None:intergenic 40.0%
AGATTGCATCAACACTGTCA+AGG + Chr4:82915504-82915523 None:intergenic 40.0%
AGCTGAACCGAGTCAAAATT+TGG + Chr4:82913382-82913401 None:intergenic 40.0%
AGCTTGTGTATTCACGTCAA+GGG + Chr4:82915773-82915792 None:intergenic 40.0%
AGGAACAGTCACAACCATTA+TGG + Chr4:82914153-82914172 None:intergenic 40.0%
ATATGTGTAATCCCTGTTCG+AGG + Chr4:82916823-82916842 None:intergenic 40.0%
ATCCTTTGAATGGCAGAAGA+TGG + Chr4:82916702-82916721 None:intergenic 40.0%
ATCTGTGAGCTAATTCCAGT+GGG + Chr4:82916092-82916111 None:intergenic 40.0%
ATGGTTGTGACTGTTCCTAT+TGG - Chr4:82914155-82914174 MsG0480023266.01.T01:intron 40.0%
CGAATTAAAGAAAGGGGTCA+AGG + Chr4:82913733-82913752 None:intergenic 40.0%
CGTTGCTGCAATATTGTTCT+AGG + Chr4:82915265-82915284 None:intergenic 40.0%
CTGTTCTCCCCAGATTATTA+GGG + Chr4:82916058-82916077 None:intergenic 40.0%
GAAACCAAAGAGCTTCTTCA+AGG - Chr4:82915339-82915358 MsG0480023266.01.T01:intron 40.0%
GAACATAGAGGTTGAAACGA+CGG + Chr4:82912466-82912485 None:intergenic 40.0%
GAAGATAAGGATATGGAGGA+TGG - Chr4:82912701-82912720 MsG0480023266.01.T01:CDS 40.0%
GAAGTGGTGAAACCTAAGAT+AGG + Chr4:82915609-82915628 None:intergenic 40.0%
GACAGGCGAATTAAAGAAAG+GGG + Chr4:82913739-82913758 None:intergenic 40.0%
GATAAAGAAGAGCAGTTCCA+GGG + Chr4:82914569-82914588 None:intergenic 40.0%
GATGACAACCTTGAAGACAA+TGG + Chr4:82914494-82914513 None:intergenic 40.0%
GCTGATCTACATCCTTTGAA+TGG + Chr4:82916712-82916731 None:intergenic 40.0%
GGAACTGCTCTTCTTTATCA+GGG - Chr4:82914570-82914589 MsG0480023266.01.T01:intron 40.0%
GTAGCCTACCCTAATAATCT+GGG - Chr4:82916047-82916066 MsG0480023266.01.T01:intron 40.0%
GTGAGGAGAATGAATGTTGT+TGG - Chr4:82912584-82912603 MsG0480023266.01.T01:three_prime_UTR 40.0%
GTTATATAGGTGTCTGACAC+CGG + Chr4:82914805-82914824 None:intergenic 40.0%
GTTCCTGATCTTCTCTTCTT+CGG - Chr4:82912482-82912501 MsG0480023266.01.T01:three_prime_UTR 40.0%
GTTGCATAGTAAACACCATG+TGG - Chr4:82916610-82916629 MsG0480023266.01.T01:CDS 40.0%
TAATCTTCCCAAGATAACCC+AGG - Chr4:82915919-82915938 MsG0480023266.01.T01:intron 40.0%
TAGCCTACCCTAATAATCTG+GGG - Chr4:82916048-82916067 MsG0480023266.01.T01:intron 40.0%
TATCAACATGGAGAAGCCAA+AGG - Chr4:82916432-82916451 MsG0480023266.01.T01:CDS 40.0%
TATGTGTAATCCCTGTTCGA+GGG + Chr4:82916822-82916841 None:intergenic 40.0%
TCCTCAGTAAACAAAGCAAG+TGG - Chr4:82913802-82913821 MsG0480023266.01.T01:intron 40.0%
TCCTTTGAATGGCAGAAGAT+GGG + Chr4:82916701-82916720 None:intergenic 40.0%
TGAACCGAGTCAAAATTTGG+AGG + Chr4:82913379-82913398 None:intergenic 40.0%
TGATAAAGAAGAGCAGTTCC+AGG + Chr4:82914570-82914589 None:intergenic 40.0%
TGGAACTGCTCTTCTTTATC+AGG - Chr4:82914569-82914588 MsG0480023266.01.T01:intron 40.0%
TGTAGCCTACCCTAATAATC+TGG - Chr4:82916046-82916065 MsG0480023266.01.T01:intron 40.0%
TGTGACACGCTTAATTCTAG+AGG + Chr4:82914676-82914695 None:intergenic 40.0%
TTCTGCCAACAGTTACCAAT+AGG + Chr4:82914173-82914192 None:intergenic 40.0%
TTCTGTTCGATCAGGTTTAG+AGG + Chr4:82912519-82912538 None:intergenic 40.0%
TTTCTTCTCCTGTCGGTATT+CGG + Chr4:82915861-82915880 None:intergenic 40.0%
! AGTAGTGGAATCTATGAGGA+AGG + Chr4:82916479-82916498 None:intergenic 40.0%
! CTGTTCCTATTGGTAACTGT+TGG - Chr4:82914165-82914184 MsG0480023266.01.T01:intron 40.0%
! GCATCCGTAAAGAGGTTTTA+CGG - Chr4:82916730-82916749 MsG0480023266.01.T01:CDS 40.0%
! GTAGAGTAGTGGAATCTATG+AGG + Chr4:82916483-82916502 None:intergenic 40.0%
! TACGAGTGTCATAGGAGTAT+CGG + Chr4:82914720-82914739 None:intergenic 40.0%
! TCCACCAGTTGTACCTTTTT+GGG - Chr4:82914228-82914247 MsG0480023266.01.T01:intron 40.0%
! TGCTGATTGTATCTTGCTCA+GGG - Chr4:82913482-82913501 MsG0480023266.01.T01:intron 40.0%
! TGGGGTTTGTTTGGAAGATA+AGG - Chr4:82912688-82912707 MsG0480023266.01.T01:CDS 40.0%
! TTCTTGCATTGGTAGAGTAG+TGG + Chr4:82916494-82916513 None:intergenic 40.0%
!! ACTGGTGTTGTTTGGCTTTA+AGG - Chr4:82914192-82914211 MsG0480023266.01.T01:intron 40.0%
!! AGCTCTTTGGTTTCACCTTT+TGG + Chr4:82915333-82915352 None:intergenic 40.0%
!! ATCTAACTCTGACTCGGATT+TGG + Chr4:82913685-82913704 None:intergenic 40.0%
!! CTGGTGTTGTTTGGCTTTAA+GGG - Chr4:82914193-82914212 MsG0480023266.01.T01:intron 40.0%
!! GTTGTTGGTGTTAGTTATGG+TGG - Chr4:82912599-82912618 MsG0480023266.01.T01:three_prime_UTR 40.0%
!! TCCACTTGCTTTGTTTACTG+AGG + Chr4:82913903-82913922 None:intergenic 40.0%
!! TCGACTTGCTTTGTTTACTG+AGG + Chr4:82913806-82913825 None:intergenic 40.0%
!! TCTAACTCTGACTCGGATTT+GGG + Chr4:82913684-82913703 None:intergenic 40.0%
!! TTGACAGTGTTGATGCAATC+TGG - Chr4:82915503-82915522 MsG0480023266.01.T01:intron 40.0%
!!! CAATTTCCATTTTAGCTCCC+TGG - Chr4:82914549-82914568 MsG0480023266.01.T01:intron 40.0%
!!! CTGAAACTGGTTTTACTTGC+AGG - Chr4:82915826-82915845 MsG0480023266.01.T01:intron 40.0%
AAATCAACCACCACCGATCT+CGG - Chr4:82912314-82912333 MsG0480023266.01.T01:three_prime_UTR 45.0%
AAGAGCTGTCTCTTTCTCCA+CGG - Chr4:82913326-82913345 MsG0480023266.01.T01:intron 45.0%
AAGGTACAACTGGTGGAGAA+AGG + Chr4:82914225-82914244 None:intergenic 45.0%
ACAACTTTCTCCACTCTCTC+CGG + Chr4:82912656-82912675 None:intergenic 45.0%
ACAAGCTGCTTCATCTTCTC+GGG + Chr4:82912782-82912801 None:intergenic 45.0%
AGAAAACAATAGCTTGGCCG+TGG + Chr4:82913346-82913365 None:intergenic 45.0%
AGAACTTGAAGTGGCGCATA+AGG + Chr4:82913583-82913602 None:intergenic 45.0%
AGTTAGACTAGGGGTCTGTT+TGG - Chr4:82913141-82913160 MsG0480023266.01.T01:intron 45.0%
AGTTGTGTTGTGTTGTGCTG+GGG - Chr4:82912670-82912689 MsG0480023266.01.T01:CDS 45.0%
CAACACTGTCAAGGCAAGAA+CGG + Chr4:82915495-82915514 None:intergenic 45.0%
CAAGCCGGCATAACTTTGAA+AGG + Chr4:82912824-82912843 None:intergenic 45.0%
CAAGTTTGCGACCATTACTG+AGG + Chr4:82916519-82916538 None:intergenic 45.0%
CAGCTTGTGTATTCACGTCA+AGG + Chr4:82915774-82915793 None:intergenic 45.0%
CCCAGCAGAAATTTCGAAGA+GGG + Chr4:82914468-82914487 None:intergenic 45.0%
CCCTCTTCGAAATTTCTGCT+GGG - Chr4:82914465-82914484 MsG0480023266.01.T01:intron 45.0%
CCTAATAATCTGGGGAGAAC+AGG - Chr4:82916056-82916075 MsG0480023266.01.T01:intron 45.0%
CCTCTTCGAAATTTCTGCTG+GGG - Chr4:82914466-82914485 MsG0480023266.01.T01:intron 45.0%
CCTGTTCTCCCCAGATTATT+AGG + Chr4:82916059-82916078 None:intergenic 45.0%
CCTTTGAATGGCAGAAGATG+GGG + Chr4:82916700-82916719 None:intergenic 45.0%
CGGTTCAGCTTCTACTTTAC+TGG - Chr4:82913392-82913411 MsG0480023266.01.T01:intron 45.0%
CTAATTCCAGTGGGAATACC+TGG + Chr4:82916083-82916102 None:intergenic 45.0%
CTTGACGTGAATACACAAGC+TGG - Chr4:82915772-82915791 MsG0480023266.01.T01:intron 45.0%
GAAGCCTTGAAGAAGCTCTT+TGG + Chr4:82915346-82915365 None:intergenic 45.0%
GAGCTAATGCAATGTGGCAA+TGG - Chr4:82912417-82912436 MsG0480023266.01.T01:three_prime_UTR 45.0%
GGTCGCAAACTTGATTAGCA+GGG - Chr4:82916526-82916545 MsG0480023266.01.T01:CDS 45.0%
GTAGATCAGCATCCGTAAAG+AGG - Chr4:82916722-82916741 MsG0480023266.01.T01:CDS 45.0%
GTCAAGGGCAAGCAAGAAAA+GGG + Chr4:82913717-82913736 None:intergenic 45.0%
GTGTATTCACGTCAAGGGAT+AGG + Chr4:82915768-82915787 None:intergenic 45.0%
TCACCGAAGAAGAGAAGATC+AGG + Chr4:82912488-82912507 None:intergenic 45.0%
TCCCTCTTCGAAATTTCTGC+TGG - Chr4:82914464-82914483 MsG0480023266.01.T01:intron 45.0%
TCTCCCCAGATTATTAGGGT+AGG + Chr4:82916054-82916073 None:intergenic 45.0%
TGCTTCAAAGGTGGAGAAGA+TGG + Chr4:82914647-82914666 None:intergenic 45.0%
TGGATGCGTCTCTACACTAA+GGG - Chr4:82914270-82914289 MsG0480023266.01.T01:intron 45.0%
TGGTCGCAAACTTGATTAGC+AGG - Chr4:82916525-82916544 MsG0480023266.01.T01:CDS 45.0%
! ACCCAAAAAGGTACAACTGG+TGG + Chr4:82914232-82914251 None:intergenic 45.0%
! CTCCACCAGTTGTACCTTTT+TGG - Chr4:82914227-82914246 MsG0480023266.01.T01:intron 45.0%
! CTGCTGATTGTATCTTGCTC+AGG - Chr4:82913481-82913500 MsG0480023266.01.T01:intron 45.0%
! GACACGCTTAATTCTAGAGG+TGG + Chr4:82914673-82914692 None:intergenic 45.0%
! TCAGTGTGTTGCTGCTCTTA+TGG - Chr4:82912550-82912569 MsG0480023266.01.T01:three_prime_UTR 45.0%
! TTGGTAACTGTTGGCAGAAC+TGG - Chr4:82914174-82914193 MsG0480023266.01.T01:intron 45.0%
!! CTTCTGGTTTGTAGGCATCT+GGG - Chr4:82916367-82916386 MsG0480023266.01.T01:CDS 45.0%
!! TATGGAGGATGGACTGTTTG+TGG - Chr4:82912712-82912731 MsG0480023266.01.T01:CDS 45.0%
!! TCTTCTCCACCTTTGAAGCA+CGG - Chr4:82914647-82914666 MsG0480023266.01.T01:intron 45.0%
!! TCTTCTGGTTTGTAGGCATC+TGG - Chr4:82916366-82916385 MsG0480023266.01.T01:CDS 45.0%
!! TTGGCAGAACTGGTGTTGTT+TGG - Chr4:82914184-82914203 MsG0480023266.01.T01:intron 45.0%
!! TTGGTGGGTTTGTGGGATTT+GGG + Chr4:82912368-82912387 None:intergenic 45.0%
!! TTTGGTGGGTTTGTGGGATT+TGG + Chr4:82912369-82912388 None:intergenic 45.0%
!!! ATAATTTTTATAGATAATTT+AGG - Chr4:82913993-82914012 MsG0480023266.01.T01:intron 5.0%
ACACTCTCTGTGAACATGGC+GGG - Chr4:82912227-82912246 MsG0480023266.01.T01:three_prime_UTR 50.0%
ACGTGTCGTACGAGTGTCAT+AGG + Chr4:82914728-82914747 None:intergenic 50.0%
AGAAACGGTAACAACGGTCG+CGG + Chr4:82912274-82912293 None:intergenic 50.0%
AGTGTAGAGACGCATCCAGT+GGG + Chr4:82914268-82914287 None:intergenic 50.0%
CACACTCTCTGTGAACATGG+CGG - Chr4:82912226-82912245 MsG0480023266.01.T01:three_prime_UTR 50.0%
CACCTGACACGACATTGACA+CGG + Chr4:82915172-82915191 None:intergenic 50.0%
CCCCAGCAGAAATTTCGAAG+AGG + Chr4:82914469-82914488 None:intergenic 50.0%
CCCCATCTTCTGCCATTCAA+AGG - Chr4:82916697-82916716 MsG0480023266.01.T01:CDS 50.0%
CGGCGTTAGAGAAGGAGAAA+CGG + Chr4:82912289-82912308 None:intergenic 50.0%
CGTGAATACACAAGCTGGCA+TGG - Chr4:82915777-82915796 MsG0480023266.01.T01:intron 50.0%
CGTTTCTCCTTCTCTAACGC+CGG - Chr4:82912287-82912306 MsG0480023266.01.T01:three_prime_UTR 50.0%
CTCTTAACACTGCACCCCTT+GGG - Chr4:82914314-82914333 MsG0480023266.01.T01:intron 50.0%
CTGGATGCGTCTCTACACTA+AGG - Chr4:82914269-82914288 MsG0480023266.01.T01:intron 50.0%
GACTAGGGGTCTGTTTGGAT+TGG - Chr4:82913146-82913165 MsG0480023266.01.T01:intron 50.0%
GCAGTTCCAGGGAGCTAAAA+TGG + Chr4:82914558-82914577 None:intergenic 50.0%
GCATGGGAGCTAATGCAATG+TGG - Chr4:82912411-82912430 MsG0480023266.01.T01:three_prime_UTR 50.0%
GGGAAAAGATGGTTCTCTGC+AGG - Chr4:82916667-82916686 MsG0480023266.01.T01:CDS 50.0%
GGTCAAGGGCAAGCAAGAAA+AGG + Chr4:82913718-82913737 None:intergenic 50.0%
TAGTGTAGAGACGCATCCAG+TGG + Chr4:82914269-82914288 None:intergenic 50.0%
TCGCACACTCTCTGTGAACA+TGG - Chr4:82912223-82912242 MsG0480023266.01.T01:three_prime_UTR 50.0%
TCTCTTAACACTGCACCCCT+TGG - Chr4:82914313-82914332 MsG0480023266.01.T01:intron 50.0%
TGCAGGGCATGCTATCAACA+TGG - Chr4:82916420-82916439 MsG0480023266.01.T01:CDS 50.0%
TGCTAAGGAACCCTCGAACA+GGG - Chr4:82916809-82916828 MsG0480023266.01.T01:CDS 50.0%
TTCATCTTCTCGGGAGTCTG+CGG + Chr4:82912773-82912792 None:intergenic 50.0%
TTGCTAAGGAACCCTCGAAC+AGG - Chr4:82916808-82916827 MsG0480023266.01.T01:CDS 50.0%
! CGGGTGTAAACCTTGGTGAT+GGG - Chr4:82914412-82914431 MsG0480023266.01.T01:intron 50.0%
! CTGGGGTACCATTGTCTTCA+AGG - Chr4:82914483-82914502 MsG0480023266.01.T01:intron 50.0%
! GCGACCCAAAAAGGTACAAC+TGG + Chr4:82914235-82914254 None:intergenic 50.0%
! GTGTTGTGCTGGGGTTTGTT+TGG - Chr4:82912679-82912698 MsG0480023266.01.T01:CDS 50.0%
! TAACCTCTTCAGCGCTGAAG+TGG + Chr4:82915625-82915644 None:intergenic 50.0%
! TAGTTTGGCGGCGTTGTTTC+CGG - Chr4:82912634-82912653 MsG0480023266.01.T01:CDS 50.0%
! TCACAGTGTCGGACACATGT+CGG - Chr4:82914691-82914710 MsG0480023266.01.T01:intron 50.0%
! TTATGGAAGCGCATGGTGTG+AGG - Chr4:82912567-82912586 MsG0480023266.01.T01:three_prime_UTR 50.0%
! TTTGAGACCGGCGTTAGAGA+AGG + Chr4:82912297-82912316 None:intergenic 50.0%
!! AGAGGGTTTGGTGGGTTTGT+GGG + Chr4:82912375-82912394 None:intergenic 50.0%
!! GGTGGTGGTTGATTTGAGAC+CGG + Chr4:82912309-82912328 None:intergenic 50.0%
!! GTGTAAACCTTGGTGATGGG+TGG - Chr4:82914415-82914434 MsG0480023266.01.T01:intron 50.0%
AACAGCGCACTCAACACCCA+AGG + Chr4:82914369-82914388 None:intergenic 55.0%
AACAGTCACGACCCACCCAA+GGG + Chr4:82914332-82914351 None:intergenic 55.0%
AACCCAGCAGTGCATGATGG+TGG + Chr4:82912345-82912364 None:intergenic 55.0%
AAGGAGGAGAGAGGGTTTGG+TGG + Chr4:82912384-82912403 None:intergenic 55.0%
AATCTGGGGAGAACAGGACC+AGG - Chr4:82916062-82916081 MsG0480023266.01.T01:intron 55.0%
ACACCACCATCATGCACTGC+TGG - Chr4:82912339-82912358 MsG0480023266.01.T01:three_prime_UTR 55.0%
ACAGCGCACTCAACACCCAA+GGG + Chr4:82914368-82914387 None:intergenic 55.0%
ACAGGACCAGGTATTCCCAC+TGG - Chr4:82916074-82916093 MsG0480023266.01.T01:intron 55.0%
AGGTTGAAACGACGGGTGAG+TGG + Chr4:82912458-82912477 None:intergenic 55.0%
CACCACCATCATGCACTGCT+GGG - Chr4:82912340-82912359 MsG0480023266.01.T01:three_prime_UTR 55.0%
CCAAGAAGGGCGACCCAAAA+AGG + Chr4:82914244-82914263 None:intergenic 55.0%
GAAACGGTAACAACGGTCGC+GGG + Chr4:82912273-82912292 None:intergenic 55.0%
GACACTCGTACGACACGTGT+CGG - Chr4:82914730-82914749 MsG0480023266.01.T01:intron 55.0%
GAGAAGGAGGAGAGAGGGTT+TGG + Chr4:82912387-82912406 None:intergenic 55.0%
GATGTGCACCGAATACCGAC+AGG - Chr4:82915850-82915869 MsG0480023266.01.T01:intron 55.0%
GCATAAGCCACCCATCACCA+AGG + Chr4:82914425-82914444 None:intergenic 55.0%
GCGGGTGTAAACCTTGGTGA+TGG - Chr4:82914411-82914430 MsG0480023266.01.T01:intron 55.0%
GTCCGTGTCAATGTCGTGTC+AGG - Chr4:82915167-82915186 MsG0480023266.01.T01:intron 55.0%
GTGTAGAGACGCATCCAGTG+GGG + Chr4:82914267-82914286 None:intergenic 55.0%
TAACACTGCACCCCTTGGGT+GGG - Chr4:82914318-82914337 MsG0480023266.01.T01:intron 55.0%
TAGAGGTGGCCGTGCTTCAA+AGG + Chr4:82914659-82914678 None:intergenic 55.0%
TCACCAAGGTTTACACCCGC+AGG + Chr4:82914411-82914430 None:intergenic 55.0%
TTAACACTGCACCCCTTGGG+TGG - Chr4:82914317-82914336 MsG0480023266.01.T01:intron 55.0%
TTGCATTAGCTCCCATGCCG+TGG + Chr4:82912409-82912428 None:intergenic 55.0%
TTGGGTGGGTCGTGACTGTT+GGG - Chr4:82914332-82914351 MsG0480023266.01.T01:intron 55.0%
! AGGAGGAGAGAGGGTTTGGT+GGG + Chr4:82912383-82912402 None:intergenic 55.0%
! GCTGCTCTTATGGAAGCGCA+TGG - Chr4:82912560-82912579 MsG0480023266.01.T01:three_prime_UTR 55.0%
! TCACCACTTCAGCGCTGAAG+AGG - Chr4:82915619-82915638 MsG0480023266.01.T01:intron 55.0%
! TTGGGTGACTTGCACCCCTT+GGG - Chr4:82914350-82914369 MsG0480023266.01.T01:intron 55.0%
!! GAGAGGGTTTGGTGGGTTTG+TGG + Chr4:82912376-82912395 None:intergenic 55.0%
!! GATGGTGGTGTTGCCGAGAT+CGG + Chr4:82912330-82912349 None:intergenic 55.0%
!!! CCTTTTTGGGTCGCCCTTCT+TGG - Chr4:82914241-82914260 MsG0480023266.01.T01:intron 55.0%
ACAGTCACGACCCACCCAAG+GGG + Chr4:82914331-82914350 None:intergenic 60.0%
AGGTGGCCGTGCTTCAAAGG+TGG + Chr4:82914656-82914675 None:intergenic 60.0%
CAACAGTCACGACCCACCCA+AGG + Chr4:82914333-82914352 None:intergenic 60.0%
CAGCGCACTCAACACCCAAG+GGG + Chr4:82914367-82914386 None:intergenic 60.0%
CCCTCTCTCCTCCTTCTCCA+CGG - Chr4:82912389-82912408 MsG0480023266.01.T01:three_prime_UTR 60.0%
CCGTGGAGAAGGAGGAGAGA+GGG + Chr4:82912392-82912411 None:intergenic 60.0%
CTCCTCCTTCTCCACGGCAT+GGG - Chr4:82912395-82912414 MsG0480023266.01.T01:three_prime_UTR 60.0%
CTGCCTGCGGGTGTAAACCT+TGG - Chr4:82914405-82914424 MsG0480023266.01.T01:intron 60.0%
CTTGGGTGGGTCGTGACTGT+TGG - Chr4:82914331-82914350 MsG0480023266.01.T01:intron 60.0%
GCATCCAGTGGGGCCAAGAA+GGG + Chr4:82914257-82914276 None:intergenic 60.0%
GGGAACCCAGCAGTGCATGA+TGG + Chr4:82912348-82912367 None:intergenic 60.0%
GGTTGTTCACTCGCTGCCTG+CGG - Chr4:82914392-82914411 MsG0480023266.01.T01:intron 60.0%
GTTGTTCACTCGCTGCCTGC+GGG - Chr4:82914393-82914412 MsG0480023266.01.T01:intron 60.0%
TAGCTCCCATGCCGTGGAGA+AGG + Chr4:82912403-82912422 None:intergenic 60.0%
TCTCCTCCTTCTCCACGGCA+TGG - Chr4:82912394-82912413 MsG0480023266.01.T01:three_prime_UTR 60.0%
! GGCGTTGTTTCCGGAGAGAG+TGG - Chr4:82912643-82912662 MsG0480023266.01.T01:CDS 60.0%
! GGTGTTGAGTGCGCTGTTGC+TGG - Chr4:82914371-82914390 MsG0480023266.01.T01:intron 60.0%
! GTTGGGTGACTTGCACCCCT+TGG - Chr4:82914349-82914368 MsG0480023266.01.T01:intron 60.0%
CGCATCCAGTGGGGCCAAGA+AGG + Chr4:82914258-82914277 None:intergenic 65.0%
CTCCCATGCCGTGGAGAAGG+AGG + Chr4:82912400-82912419 None:intergenic 65.0%
GCCGTGGAGAAGGAGGAGAG+AGG + Chr4:82912393-82912412 None:intergenic 65.0%
! GGTGTTGCCGAGATCGGTGG+TGG + Chr4:82912324-82912343 None:intergenic 65.0%
!! GGTGGTGTTGCCGAGATCGG+TGG + Chr4:82912327-82912346 None:intergenic 65.0%
GTCGCCCTTCTTGGCCCCAC+TGG - Chr4:82914250-82914269 MsG0480023266.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 82912188 82916987 82912188 ID=MsG0480023266.01;Name=MsG0480023266.01
Chr4 mRNA 82912188 82916987 82912188 ID=MsG0480023266.01.T01;Parent=MsG0480023266.01;Name=MsG0480023266.01.T01;_AED=0.36;_eAED=0.38;_QI=0|0.5|0.33|1|0.5|0.66|3|444|324
Chr4 exon 82912188 82912794 82912188 ID=MsG0480023266.01.T01:exon:975;Parent=MsG0480023266.01.T01
Chr4 exon 82913194 82913327 82913194 ID=MsG0480023266.01.T01:exon:974;Parent=MsG0480023266.01.T01
Chr4 exon 82916310 82916987 82916310 ID=MsG0480023266.01.T01:exon:973;Parent=MsG0480023266.01.T01
Chr4 CDS 82916310 82916987 82916310 ID=MsG0480023266.01.T01:cds;Parent=MsG0480023266.01.T01
Chr4 CDS 82913194 82913327 82913194 ID=MsG0480023266.01.T01:cds;Parent=MsG0480023266.01.T01
Chr4 CDS 82912632 82912794 82912632 ID=MsG0480023266.01.T01:cds;Parent=MsG0480023266.01.T01
Chr4 three_prime_UTR 82912188 82912631 82912188 ID=MsG0480023266.01.T01:three_prime_utr;Parent=MsG0480023266.01.T01
Gene Sequence

>MsG0480023266.01.T01

ATGCTTAGCTTTGAGTCAAAGCAAAGAGTCTTCTTTCGCACACTCTCTGTGAACATGGCGGGTTGTTTCAGCTTCACTGCTTCCCGCGACCGTTGTTACCGTTTCTCCTTCTCTAACGCCGGTCTCAAATCAACCACCACCGATCTCGGCAACACCACCATCATGCACTGCTGGGTTCCCAAATCCCACAAACCCACCAAACCCTCTCTCCTCCTTCTCCACGGCATGGGAGCTAATGCAATGTGGCAATGGAACGATTTCATCTCTCCACTCACCCGTCGTTTCAACCTCTATGTTCCTGATCTTCTCTTCTTCGGTGAGTCTCACACCTCTAAACCTGATCGAACAGAATCTTTTCAAGCTCAGTGTGTTGCTGCTCTTATGGAAGCGCATGGTGTGAGGAGAATGAATGTTGTTGGTGTTAGTTATGGTGGTTTTGTTGGGTATAGTTTGGCGGCGTTGTTTCCGGAGAGAGTGGAGAAAGTTGTGTTGTGTTGTGCTGGGGTTTGTTTGGAAGATAAGGATATGGAGGATGGACTGTTTGTGGTTAAGAATATTGACGAAGCTGCTATGATTTTGATTCCGCAGACTCCCGAGAAGATGAAGCAGCTTGTTAAGCTTACTTTTGTTAAGCCTTTCAAAGTTATGCCGGCTTGCTTTCTCACTGATTTCATTGATGTGATGTGCACCGAATACCGACAGGAGAAGAAAGAACTAATTGAAACATTATACAAGGATAGAAAACTGTCTAATCTTCCCAAGATAACCCAGGTTTATCTTCTCTTTTATTCTCTCTTGTGCTTACTTTGTGAGCATCTGGGAGAAAATGCACAACTAGTTGTTGTTAAGAATGCAGGGCATGCTATCAACATGGAGAAGCCAAAGGAACTGTCTAAGATTTTAAAATCCTTCCTCATAGATTCCACTACTCTACCAATGCAAGAAAACCTCAGTAATGGTCGCAAACTTGATTAG
Protein sequence

>MsG0480023266.01.T01

MLSFESKQRVFFRTLSVNMAGCFSFTASRDRCYRFSFSNAGLKSTTTDLGNTTIMHCWVPKSHKPTKPSLLLLHGMGANAMWQWNDFISPLTRRFNLYVPDLLFFGESHTSKPDRTESFQAQCVAALMEAHGVRRMNVVGVSYGGFVGYSLAALFPERVEKVVLCCAGVCLEDKDMEDGLFVVKNIDEAAMILIPQTPEKMKQLVKLTFVKPFKVMPACFLTDFIDVMCTEYRQEKKELIETLYKDRKLSNLPKITQVYLLFYSLLCLLCEHLGENAQLVVVKNAGHAINMEKPKELSKILKSFLIDSTTLPMQENLSNGRKLD*