AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023362.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023362.01.T01 MTR_8g058537 100.000 145 0 0 16 160 2 146 2.17e-104 295
MsG0480023362.01.T01 MTR_8g058420 100.000 145 0 0 16 160 2 146 2.17e-104 295
MsG0480023362.01.T01 MTR_7g108700 100.000 143 0 0 16 158 2 144 9.19e-103 291
MsG0480023362.01.T01 MTR_8g091620 98.601 143 2 0 16 158 2 144 5.04e-101 286
MsG0480023362.01.T01 MTR_1g088710 72.277 101 10 1 15 115 1 83 2.01e-48 152
MsG0480023362.01.T01 MTR_8g092200 32.520 123 79 2 14 136 5 123 4.28e-15 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023362.01.T01 AT5G27720 76.812 138 11 1 16 153 2 118 8.13e-59 179
MsG0480023362.01.T01 AT1G76300 33.663 101 66 1 14 114 5 104 1.14e-14 67.0
MsG0480023362.01.T01 AT1G20580 33.981 103 65 2 14 114 5 106 4.95e-14 65.5

Find 51 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGGATGGAGATAGATTT+TGG 0.264813 4:-84198432 MsG0480023362.01.T01:intron
AGGGAGGATGCTGCTGGTGC+TGG 0.332056 4:-84197317 MsG0480023362.01.T01:CDS
TTTCCTCGTATGTAGCATTC+AGG 0.370451 4:+84198403 None:intergenic
ACCTGGTGTGGGACGTGGTA+GGG 0.379220 4:-84197348 MsG0480023362.01.T01:CDS
GCTAGAGGAGCCGGAGGCCG+AGG 0.384622 4:-84197248 MsG0480023362.01.T01:CDS
TTCCTCCAGGCTTTCCACCT+TGG 0.401016 4:+84197216 None:intergenic
CCTGGTGTGGGACGTGGTAG+GGG 0.408573 4:-84197347 MsG0480023362.01.T01:CDS
GATGGTGGGGCTAGAGGAGC+CGG 0.409841 4:-84197257 MsG0480023362.01.T01:CDS
TTAGGTTATCGACAAAGTTC+AGG 0.410051 4:-84197875 MsG0480023362.01.T01:intron
GAGGAGCCGGAGGCCGAGGC+AGG 0.410182 4:-84197244 MsG0480023362.01.T01:CDS
AGAGACATATAATGGGCATT+TGG 0.429273 4:-84198606 MsG0480023362.01.T01:CDS
GCTAGCCCTGCCTCGGCCTC+CGG 0.431923 4:+84197238 None:intergenic
GATTTACCTCTGCTTCCTCC+AGG 0.434977 4:+84197203 None:intergenic
CACCTTGGCTAGCCCTGCCT+CGG 0.439949 4:+84197231 None:intergenic
CAGGAAGAAAAGAGCCGTAC+AGG 0.450547 4:-84197856 MsG0480023362.01.T01:intron
GCTAGCCAAGGTGGAAAGCC+TGG 0.450993 4:-84197221 MsG0480023362.01.T01:CDS
GACGTGGTAGGGGTAGAGGT+AGG 0.454494 4:-84197337 MsG0480023362.01.T01:CDS
CACCTGGTGTGGGACGTGGT+AGG 0.455282 4:-84197349 MsG0480023362.01.T01:CDS
AGAGGTAGGGAGGATGCTGC+TGG 0.457443 4:-84197323 MsG0480023362.01.T01:CDS
GTGGGACGTGGTAGGGGTAG+AGG 0.457910 4:-84197341 MsG0480023362.01.T01:CDS
TAGAGGTACAAATAACTTCT+CGG 0.459260 4:+84198552 None:intergenic
GCTGGTGGACGCCAAACAAA+AGG 0.478487 4:-84197299 MsG0480023362.01.T01:CDS
AAGCCACCTGGTGTGGGACG+TGG 0.485336 4:-84197353 MsG0480023362.01.T01:CDS
CCACCATTACATACCTCATC+AGG 0.487502 4:+84198358 None:intergenic
ATTTGGTTAATTGCGATACA+TGG 0.494307 4:-84198589 MsG0480023362.01.T01:CDS
TTTGATGATGGTGGGGCTAG+AGG 0.507529 4:-84197263 MsG0480023362.01.T01:CDS
ACGTGGTAGGGGTAGAGGTA+GGG 0.508609 4:-84197336 MsG0480023362.01.T01:CDS
CCCCTACCACGTCCCACACC+AGG 0.510334 4:+84197347 None:intergenic
GGACGCCAAACAAAAGGCAC+TGG 0.511420 4:-84197293 MsG0480023362.01.T01:CDS
AAAATGGAGAGACATATAAT+GGG 0.512411 4:-84198613 MsG0480023362.01.T01:CDS
GAGGATGCTGCTGGTGCTGG+TGG 0.518067 4:-84197314 MsG0480023362.01.T01:CDS
GCAGTCTTAAGAAGAGAAAG+AGG 0.523025 4:+84198769 None:intergenic
GAGGAAGCTGCAACAAAAGA+AGG 0.523721 4:+84198788 None:intergenic
CAAACAAAAGGCACTGGGCG+TGG 0.536007 4:-84197287 MsG0480023362.01.T01:CDS
AGATCGCAAGCCACCTGGTG+TGG 0.544354 4:-84197360 MsG0480023362.01.T01:CDS
TGGTAGGGGTAGAGGTAGGG+AGG 0.553128 4:-84197333 MsG0480023362.01.T01:CDS
GACTGCACAAGGCCACCCTA+TGG 0.555565 4:-84198752 MsG0480023362.01.T01:intron
AGGAGCCGGAGGCCGAGGCA+GGG 0.555849 4:-84197243 MsG0480023362.01.T01:CDS
GATCGCAAGCCACCTGGTGT+GGG 0.560007 4:-84197359 MsG0480023362.01.T01:CDS
AATAATACTTCGTACCTGTA+CGG 0.560276 4:+84197842 None:intergenic
GGCCGAGGCAGGGCTAGCCA+AGG 0.579681 4:-84197233 MsG0480023362.01.T01:CDS
GGAAAGCCTGGAGGAAGCAG+AGG 0.582079 4:-84197209 MsG0480023362.01.T01:CDS
TCTCTTCTTAAGACTGCACA+AGG 0.621157 4:-84198763 MsG0480023362.01.T01:CDS
CGAGGCAGGGCTAGCCAAGG+TGG 0.621999 4:-84197230 MsG0480023362.01.T01:CDS
GACGCCAAACAAAAGGCACT+GGG 0.628038 4:-84197292 MsG0480023362.01.T01:CDS
GGTGGGGCTAGAGGAGCCGG+AGG 0.637584 4:-84197254 MsG0480023362.01.T01:CDS
GTACCTTCGAGTTCCTGATG+AGG 0.661844 4:-84198371 MsG0480023362.01.T01:intron
CTACCACGTCCCACACCAGG+TGG 0.667375 4:+84197350 None:intergenic
ATACCTCATCAGGAACTCGA+AGG 0.675708 4:+84198368 None:intergenic
ATGCCTGAATGCTACATACG+AGG 0.709688 4:-84198406 MsG0480023362.01.T01:CDS
AGCCAAGGTGGAAAGCCTGG+AGG 0.717081 4:-84197218 MsG0480023362.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAGTAAAATAAATAAAA+AGG + Chr4:84197303-84197322 None:intergenic 10.0%
!!! AACTTTATTTTTTATTTAAC+TGG + Chr4:84198613-84198632 None:intergenic 10.0%
!!! ATTTTCTTAAATAACATAAA+AGG + Chr4:84197896-84197915 None:intergenic 10.0%
!!! TTTTCTTAAATAACATAAAA+GGG + Chr4:84197895-84197914 None:intergenic 10.0%
!!! TTTTTATTTATTTTACTTTG+TGG - Chr4:84197302-84197321 MsG0480023362.01.T01:CDS 10.0%
!! AATCAGAAGAAAATTATATA+TGG + Chr4:84198490-84198509 None:intergenic 15.0%
!!! ATGTTATTTAAGAAAATCAT+TGG - Chr4:84197899-84197918 MsG0480023362.01.T01:intron 15.0%
!!! TTTAATTTGTTATTGTTGAA+AGG - Chr4:84197530-84197549 MsG0480023362.01.T01:intron 15.0%
!! AAATTATCTGATTCACTAAA+AGG + Chr4:84198062-84198081 None:intergenic 20.0%
!! AATTATCTGATTCACTAAAA+GGG + Chr4:84198061-84198080 None:intergenic 20.0%
!! AGTTATTTATAAAGAGATCA+AGG - Chr4:84197697-84197716 MsG0480023362.01.T01:intron 20.0%
!! GTTATTTATAAAGAGATCAA+GGG - Chr4:84197698-84197717 MsG0480023362.01.T01:intron 20.0%
!! TATTTCAATCCAAAATCTAA+AGG + Chr4:84198324-84198343 None:intergenic 20.0%
!! TTTAAACTAATGATATGAAG+TGG + Chr4:84197777-84197796 None:intergenic 20.0%
!!! TATGAATTTTGATTGAAACT+GGG - Chr4:84197559-84197578 MsG0480023362.01.T01:intron 20.0%
!!! TTAGATTTTGGATTGAAATA+TGG - Chr4:84198324-84198343 MsG0480023362.01.T01:intron 20.0%
!!! TTATGAATTTTGATTGAAAC+TGG - Chr4:84197558-84197577 MsG0480023362.01.T01:intron 20.0%
! AAAAATGGAGAGACATATAA+TGG - Chr4:84197402-84197421 MsG0480023362.01.T01:intron 25.0%
! AAAATGGAGAGACATATAAT+GGG - Chr4:84197403-84197422 MsG0480023362.01.T01:intron 25.0%
! TAAGAAAATCATTGGTGAAT+AGG - Chr4:84197907-84197926 MsG0480023362.01.T01:intron 25.0%
! TGATAAATCCTAAATTGACT+TGG - Chr4:84198248-84198267 MsG0480023362.01.T01:intron 25.0%
! TTACCTTGATACATGAATAT+TGG - Chr4:84198443-84198462 MsG0480023362.01.T01:intron 25.0%
!!! AAAAAAGAGCATTACTTTAG+AGG + Chr4:84197484-84197503 None:intergenic 25.0%
AAGCTGAGTAAGATATAAAG+TGG - Chr4:84198278-84198297 MsG0480023362.01.T01:intron 30.0%
AATAATACTTCGTACCTGTA+CGG + Chr4:84198177-84198196 None:intergenic 30.0%
ACACCAATATTCATGTATCA+AGG + Chr4:84198449-84198468 None:intergenic 30.0%
AGATTGATATGTTGGAATAG+TGG - Chr4:84197821-84197840 MsG0480023362.01.T01:intron 30.0%
ATTTGGTTAATTGCGATACA+TGG - Chr4:84197427-84197446 MsG0480023362.01.T01:intron 30.0%
GCAATAGTAGATTGATATGT+TGG - Chr4:84197813-84197832 MsG0480023362.01.T01:intron 30.0%
TTGTCGATAACCTAAATCAA+AGG + Chr4:84198136-84198155 None:intergenic 30.0%
! AATCTGTCACCTTTAGATTT+TGG - Chr4:84198312-84198331 MsG0480023362.01.T01:intron 30.0%
! TAGAGGTACAAATAACTTCT+CGG + Chr4:84197467-84197486 None:intergenic 30.0%
! TGCTTTATTGCCTTTGATTT+AGG - Chr4:84198123-84198142 MsG0480023362.01.T01:intron 30.0%
! TTCTGATTGATTCTGACTTA+GGG - Chr4:84198502-84198521 MsG0480023362.01.T01:intron 30.0%
!! AATCCTAAATTGACTTGGAA+TGG - Chr4:84198253-84198272 MsG0480023362.01.T01:intron 30.0%
!! AGGTTTTTGTTACTTACCAT+AGG + Chr4:84197283-84197302 None:intergenic 30.0%
!! ATCCTAAATTGACTTGGAAT+GGG - Chr4:84198254-84198273 MsG0480023362.01.T01:intron 30.0%
!! ATTTGTTATTGTTGAAAGGC+TGG - Chr4:84197534-84197553 MsG0480023362.01.T01:intron 30.0%
!! GGTTTTTGTTACTTACCATA+GGG + Chr4:84197282-84197301 None:intergenic 30.0%
!! TTGGAATAGTGGATTCTTAT+TGG - Chr4:84197832-84197851 MsG0480023362.01.T01:intron 30.0%
!! TTTGAACTTGTTGTAACAGT+TGG - Chr4:84197371-84197390 MsG0480023362.01.T01:intron 30.0%
AAATGGCATTTCAACTTGTG+TGG + Chr4:84198579-84198598 None:intergenic 35.0%
AACCTTACCTTGTGATCTAT+TGG - Chr4:84197944-84197963 MsG0480023362.01.T01:intron 35.0%
AATGGCATTTCAACTTGTGT+GGG + Chr4:84198578-84198597 None:intergenic 35.0%
TATTGGTCATGGGTTTAGTT+GGG - Chr4:84197961-84197980 MsG0480023362.01.T01:intron 35.0%
TTAGGTTATCGACAAAGTTC+AGG - Chr4:84198141-84198160 MsG0480023362.01.T01:intron 35.0%
TTGATTGAAACTGGGAATGT+AGG - Chr4:84197567-84197586 MsG0480023362.01.T01:intron 35.0%
! ACACTACAGAGATGTAGTTT+TGG + Chr4:84198361-84198380 None:intergenic 35.0%
! ACTACATCTCTGTAGTGTTT+TGG - Chr4:84198363-84198382 MsG0480023362.01.T01:intron 35.0%
! CTTCTGATTGATTCTGACTT+AGG - Chr4:84198501-84198520 MsG0480023362.01.T01:intron 35.0%
! TGTAGGATGGAGATAGATTT+TGG - Chr4:84197584-84197603 MsG0480023362.01.T01:intron 35.0%
!! AGAGACATATAATGGGCATT+TGG - Chr4:84197410-84197429 MsG0480023362.01.T01:intron 35.0%
!! TTTTGTTACTTACCATAGGG+TGG + Chr4:84197279-84197298 None:intergenic 35.0%
AACTGGACGACTGCATAAAA+TGG + Chr4:84198596-84198615 None:intergenic 40.0%
ACCCAACAAACTTTCTCTGT+TGG - Chr4:84198404-84198423 MsG0480023362.01.T01:CDS 40.0%
ACCCAACAGAGAAAGTTTGT+TGG + Chr4:84198409-84198428 None:intergenic 40.0%
ACCTTGTGATCTATTGGTCA+TGG - Chr4:84197950-84197969 MsG0480023362.01.T01:intron 40.0%
CCCAACAAACTTTCTCTGTT+GGG - Chr4:84198405-84198424 MsG0480023362.01.T01:CDS 40.0%
CCTTGTGATCTATTGGTCAT+GGG - Chr4:84197951-84197970 MsG0480023362.01.T01:intron 40.0%
CTATTGGTCATGGGTTTAGT+TGG - Chr4:84197960-84197979 MsG0480023362.01.T01:intron 40.0%
GACCAATAGATCACAAGGTA+AGG + Chr4:84197949-84197968 None:intergenic 40.0%
GCAGTCTTAAGAAGAGAAAG+AGG + Chr4:84197250-84197269 None:intergenic 40.0%
GTTCCTGATGAGGTATGTAA+TGG - Chr4:84197655-84197674 MsG0480023362.01.T01:intron 40.0%
TCTAAAGGTGACAGATTCAC+AGG + Chr4:84198309-84198328 None:intergenic 40.0%
TCTCTTCTTAAGACTGCACA+AGG - Chr4:84197253-84197272 MsG0480023362.01.T01:CDS 40.0%
TGCCCATTCCAAGTCAATTT+AGG + Chr4:84198259-84198278 None:intergenic 40.0%
TGGTGAATAGGTTGCTAAGA+AGG - Chr4:84197919-84197938 MsG0480023362.01.T01:intron 40.0%
TTGAAACTGGGAATGTAGGA+TGG - Chr4:84197571-84197590 MsG0480023362.01.T01:intron 40.0%
TTTCCTCGTATGTAGCATTC+AGG + Chr4:84197616-84197635 None:intergenic 40.0%
! AGGATGGAGATAGATTTTGG+CGG - Chr4:84197587-84197606 MsG0480023362.01.T01:intron 40.0%
! CCCAACAGAGAAAGTTTGTT+GGG + Chr4:84198408-84198427 None:intergenic 40.0%
!! GAACTTGTTGTAACAGTTGG+TGG - Chr4:84197374-84197393 MsG0480023362.01.T01:intron 40.0%
!!! CTACAGAGATGTAGTTTTGG+TGG + Chr4:84198358-84198377 None:intergenic 40.0%
AGAGTATGAGCACAACCTTG+AGG + Chr4:84198013-84198032 None:intergenic 45.0%
ATACCTCATCAGGAACTCGA+AGG + Chr4:84197651-84197670 None:intergenic 45.0%
ATGCCTGAATGCTACATACG+AGG - Chr4:84197610-84197629 MsG0480023362.01.T01:intron 45.0%
CCACCATTACATACCTCATC+AGG + Chr4:84197661-84197680 None:intergenic 45.0%
CCCATGACCAATAGATCACA+AGG + Chr4:84197954-84197973 None:intergenic 45.0%
CCTGATGAGGTATGTAATGG+TGG - Chr4:84197658-84197677 MsG0480023362.01.T01:intron 45.0%
GAGGAAGCTGCAACAAAAGA+AGG + Chr4:84197231-84197250 None:intergenic 45.0%
GGGAAAAACCTTGTGCTTGA+GGG - Chr4:84197981-84198000 MsG0480023362.01.T01:intron 45.0%
TGGGAAAAACCTTGTGCTTG+AGG - Chr4:84197980-84197999 MsG0480023362.01.T01:intron 45.0%
!! CAGTTGGTGGAGCTGAAAAA+TGG - Chr4:84197387-84197406 MsG0480023362.01.T01:intron 45.0%
CAGGAAGAAAAGAGCCGTAC+AGG - Chr4:84198160-84198179 MsG0480023362.01.T01:intron 50.0%
GATTTACCTCTGCTTCCTCC+AGG + Chr4:84198816-84198835 None:intergenic 50.0%
GCTTGAGGGTTTAAGCCTCA+AGG - Chr4:84197995-84198014 MsG0480023362.01.T01:intron 50.0%
GGCTTAAACCCTCAAGCACA+AGG + Chr4:84197992-84198011 None:intergenic 50.0%
! GGTGGCTTGCGATCTGAAAA+AGG + Chr4:84198651-84198670 None:intergenic 50.0%
! GTACCTTCGAGTTCCTGATG+AGG - Chr4:84197645-84197664 MsG0480023362.01.T01:intron 50.0%
! TTTTCAGATCGCAAGCCACC+TGG - Chr4:84198651-84198670 MsG0480023362.01.T01:intron 50.0%
!! GACGCCAAACAAAAGGCACT+GGG - Chr4:84198724-84198743 MsG0480023362.01.T01:intron 50.0%
!! TTTGATGATGGTGGGGCTAG+AGG - Chr4:84198753-84198772 MsG0480023362.01.T01:CDS 50.0%
!!! ACTGGGCGTGGTTTTGATGA+TGG - Chr4:84198741-84198760 MsG0480023362.01.T01:intron 50.0%
!!! GCGTGGTTTTGATGATGGTG+GGG - Chr4:84198746-84198765 MsG0480023362.01.T01:intron 50.0%
!!! GGCGTGGTTTTGATGATGGT+GGG - Chr4:84198745-84198764 MsG0480023362.01.T01:intron 50.0%
ACGTGGTAGGGGTAGAGGTA+GGG - Chr4:84198680-84198699 MsG0480023362.01.T01:intron 55.0%
TTCCTCCAGGCTTTCCACCT+TGG + Chr4:84198803-84198822 None:intergenic 55.0%
! CACGCCCAGTGCCTTTTGTT+TGG + Chr4:84198731-84198750 None:intergenic 55.0%
! GCTGGTGGACGCCAAACAAA+AGG - Chr4:84198717-84198736 MsG0480023362.01.T01:intron 55.0%
! GGACGCCAAACAAAAGGCAC+TGG - Chr4:84198723-84198742 MsG0480023362.01.T01:intron 55.0%
!! CAAACAAAAGGCACTGGGCG+TGG - Chr4:84198729-84198748 MsG0480023362.01.T01:intron 55.0%
!!! GGGCGTGGTTTTGATGATGG+TGG - Chr4:84198744-84198763 MsG0480023362.01.T01:intron 55.0%
ACCTGGTGTGGGACGTGGTA+GGG - Chr4:84198668-84198687 MsG0480023362.01.T01:intron 60.0%
AGAGGTAGGGAGGATGCTGC+TGG - Chr4:84198693-84198712 MsG0480023362.01.T01:intron 60.0%
AGATCGCAAGCCACCTGGTG+TGG - Chr4:84198656-84198675 MsG0480023362.01.T01:intron 60.0%
AGCCAAGGTGGAAAGCCTGG+AGG - Chr4:84198798-84198817 MsG0480023362.01.T01:CDS 60.0%
GACGTGGTAGGGGTAGAGGT+AGG - Chr4:84198679-84198698 MsG0480023362.01.T01:intron 60.0%
GACTGCACAAGGCCACCCTA+TGG - Chr4:84197264-84197283 MsG0480023362.01.T01:CDS 60.0%
GATCGCAAGCCACCTGGTGT+GGG - Chr4:84198657-84198676 MsG0480023362.01.T01:intron 60.0%
GCTAGCCAAGGTGGAAAGCC+TGG - Chr4:84198795-84198814 MsG0480023362.01.T01:CDS 60.0%
GGAAAGCCTGGAGGAAGCAG+AGG - Chr4:84198807-84198826 MsG0480023362.01.T01:CDS 60.0%
TGGTAGGGGTAGAGGTAGGG+AGG - Chr4:84198683-84198702 MsG0480023362.01.T01:intron 60.0%
AAGCCACCTGGTGTGGGACG+TGG - Chr4:84198663-84198682 MsG0480023362.01.T01:intron 65.0%
AGGGAGGATGCTGCTGGTGC+TGG - Chr4:84198699-84198718 MsG0480023362.01.T01:intron 65.0%
CACCTGGTGTGGGACGTGGT+AGG - Chr4:84198667-84198686 MsG0480023362.01.T01:intron 65.0%
CCTGGTGTGGGACGTGGTAG+GGG - Chr4:84198669-84198688 MsG0480023362.01.T01:intron 65.0%
CTACCACGTCCCACACCAGG+TGG + Chr4:84198669-84198688 None:intergenic 65.0%
GTGGGACGTGGTAGGGGTAG+AGG - Chr4:84198675-84198694 MsG0480023362.01.T01:intron 65.0%
! CACCTTGGCTAGCCCTGCCT+CGG + Chr4:84198788-84198807 None:intergenic 65.0%
! GAGGATGCTGCTGGTGCTGG+TGG - Chr4:84198702-84198721 MsG0480023362.01.T01:intron 65.0%
!! GATGGTGGGGCTAGAGGAGC+CGG - Chr4:84198759-84198778 MsG0480023362.01.T01:CDS 65.0%
CCCCTACCACGTCCCACACC+AGG + Chr4:84198672-84198691 None:intergenic 70.0%
!! CGAGGCAGGGCTAGCCAAGG+TGG - Chr4:84198786-84198805 MsG0480023362.01.T01:CDS 70.0%
AGGAGCCGGAGGCCGAGGCA+GGG - Chr4:84198773-84198792 MsG0480023362.01.T01:CDS 75.0%
GCTAGAGGAGCCGGAGGCCG+AGG - Chr4:84198768-84198787 MsG0480023362.01.T01:CDS 75.0%
GCTAGCCCTGCCTCGGCCTC+CGG + Chr4:84198781-84198800 None:intergenic 75.0%
GGTGGGGCTAGAGGAGCCGG+AGG - Chr4:84198762-84198781 MsG0480023362.01.T01:CDS 75.0%
!! GGCCGAGGCAGGGCTAGCCA+AGG - Chr4:84198783-84198802 MsG0480023362.01.T01:CDS 75.0%
! GAGGAGCCGGAGGCCGAGGC+AGG - Chr4:84198772-84198791 MsG0480023362.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 84197199 84198839 84197199 ID=MsG0480023362.01;Name=MsG0480023362.01
Chr4 mRNA 84197199 84198839 84197199 ID=MsG0480023362.01.T01;Parent=MsG0480023362.01;Name=MsG0480023362.01.T01;_AED=0.43;_eAED=0.49;_QI=0|1|0.6|1|1|1|5|0|160
Chr4 exon 84198753 84198839 84198753 ID=MsG0480023362.01.T01:exon:1271;Parent=MsG0480023362.01.T01
Chr4 exon 84198550 84198648 84198550 ID=MsG0480023362.01.T01:exon:1270;Parent=MsG0480023362.01.T01
Chr4 exon 84198372 84198449 84198372 ID=MsG0480023362.01.T01:exon:1269;Parent=MsG0480023362.01.T01
Chr4 exon 84197857 84197893 84197857 ID=MsG0480023362.01.T01:exon:1268;Parent=MsG0480023362.01.T01
Chr4 exon 84197199 84197380 84197199 ID=MsG0480023362.01.T01:exon:1267;Parent=MsG0480023362.01.T01
Chr4 CDS 84198753 84198839 84198753 ID=MsG0480023362.01.T01:cds;Parent=MsG0480023362.01.T01
Chr4 CDS 84198550 84198648 84198550 ID=MsG0480023362.01.T01:cds;Parent=MsG0480023362.01.T01
Chr4 CDS 84198372 84198449 84198372 ID=MsG0480023362.01.T01:cds;Parent=MsG0480023362.01.T01
Chr4 CDS 84197857 84197893 84197857 ID=MsG0480023362.01.T01:cds;Parent=MsG0480023362.01.T01
Chr4 CDS 84197199 84197380 84197199 ID=MsG0480023362.01.T01:cds;Parent=MsG0480023362.01.T01
Gene Sequence

>MsG0480023362.01.T01

ATGTTTGCAATTATCTTAATTTTTTTTTACCTTCTTTTGTTGCAGCTTCCTCTTTCTCTTCTTAAGACTGCACAAGGCCACCCTATGTTGGTGGAGCTGAAAAATGGAGAGACATATAATGGGCATTTGGTTAATTGCGATACATGGATGAACATTCATCTCCGAGAAGTTATTTGTACCTCTAAAGATGGAGATAGATTTTGGCGGATGCCTGAATGCTACATACGAGGAAATACGATCAAGTACCTTCGAGTTCCTGATGAGGTTATCGACAAAGTTCAGGAAGAAAAGAGCCGTACAGATCGCAAGCCACCTGGTGTGGGACGTGGTAGGGGTAGAGGTAGGGAGGATGCTGCTGGTGCTGGTGGACGCCAAACAAAAGGCACTGGGCGTGGTTTTGATGATGGTGGGGCTAGAGGAGCCGGAGGCCGAGGCAGGGCTAGCCAAGGTGGAAAGCCTGGAGGAAGCAGAGGTAAATCATAA
Protein sequence

>MsG0480023362.01.T01

MFAIILIFFYLLLLQLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDAAGAGGRQTKGTGRGFDDGGARGAGGRGRASQGGKPGGSRGKS*