AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038909.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038909.01.T01 MTR_7g065100 100.000 99 0 0 1 99 1 99 3.16e-67 197
MsG0780038909.01.T01 MTR_8g036205 96.512 86 3 0 1 86 1 86 5.92e-53 161
MsG0780038909.01.T01 MTR_7g104930 38.028 71 35 1 10 80 9 70 1.18e-12 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038909.01.T01 AT2G03870 90.816 98 9 0 1 98 1 98 2.51e-60 179
MsG0780038909.01.T01 AT2G03870 90.816 98 9 0 1 98 1 98 2.51e-60 179
MsG0780038909.01.T01 AT2G23930 42.254 71 32 2 10 80 9 70 3.68e-13 59.7
MsG0780038909.01.T01 AT3G11500 39.437 71 34 1 10 80 9 70 2.36e-12 57.8
MsG0780038909.01.T01 AT3G11500 39.437 71 34 1 10 80 9 70 2.36e-12 57.8

Find 40 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATTGAACTTCCTGTTAT+GGG 0.314456 7:-55248222 MsG0780038909.01.T01:three_prime_UTR
TTAAATTGAACTTCCTGTTA+TGG 0.322004 7:-55248223 MsG0780038909.01.T01:three_prime_UTR
TTTGTTAGCATACATATATT+AGG 0.322778 7:+55248351 None:intergenic
AGGGAGGAAAGAAACAGTTT+TGG 0.368734 7:-55253017 MsG0780038909.01.T01:CDS
AGCATTTGAACTCCCATAAC+AGG 0.394324 7:+55248210 None:intergenic
ACAATGCTTAGTAACTAAAC+TGG 0.403372 7:+55248320 None:intergenic
GCCCCATCTGGTTGAAGAAA+GGG 0.432718 7:+55248400 None:intergenic
CGCCCCATCTGGTTGAAGAA+AGG 0.450498 7:+55248399 None:intergenic
TCTCATCGGTACCATCAGTT+GGG 0.463107 7:+55248431 None:intergenic
ATTCACTCTTACGCCCCATC+TGG 0.472924 7:+55248388 None:intergenic
TCAATTACTTAATCTTGTAC+TGG 0.475275 7:-55250293 MsG0780038909.01.T01:CDS
ACCCCTTTCTTCAACCAGAT+GGG 0.493242 7:-55248402 MsG0780038909.01.T01:CDS
AACCCCTTTCTTCAACCAGA+TGG 0.507354 7:-55248403 MsG0780038909.01.T01:CDS
TCAGTGACAGGAACTTTGAA+AGG 0.518990 7:-55250322 MsG0780038909.01.T01:intron
ATCTCATCGGTACCATCAGT+TGG 0.519831 7:+55248430 None:intergenic
AGCAAGTAGACAAGAAAGGA+AGG 0.530627 7:+55248152 None:intergenic
TGTCAGAAGCGTTAACGCAT+AGG 0.532509 7:+55248273 None:intergenic
GCCAAGACTTCTTGTCTGAT+CGG 0.535649 7:+55249260 None:intergenic
GCTAAAATGCAGGTTTGTAG+AGG 0.541478 7:-55248475 MsG0780038909.01.T01:intron
ACCGATCAGACAAGAAGTCT+TGG 0.542240 7:-55249261 MsG0780038909.01.T01:CDS
ACAGAGACGATCTGAGGTGC+AGG 0.542595 7:+55253204 None:intergenic
TTGGCAAAATTCGTTGACAA+AGG 0.572355 7:-55252992 MsG0780038909.01.T01:CDS
CCCCATCTGGTTGAAGAAAG+GGG 0.574538 7:+55248401 None:intergenic
CCCCTTTCTTCAACCAGATG+GGG 0.577044 7:-55248401 MsG0780038909.01.T01:CDS
ATGCTTGTGTCCCCAACTGA+TGG 0.595021 7:-55248442 MsG0780038909.01.T01:CDS
GAGACGATCTGAGGTGCAGG+TGG 0.596597 7:+55253207 None:intergenic
CGCATAGGAGAGTCACGACT+AGG 0.612672 7:+55248288 None:intergenic
AGGATTACCTTGTCTACCAC+CGG 0.613364 7:+55252952 None:intergenic
GGTGTTCAAGTTAAGCTCAC+CGG 0.616462 7:-55252971 MsG0780038909.01.T01:CDS
AAGCTCACCGGTGGTAGACA+AGG 0.616471 7:-55252959 MsG0780038909.01.T01:intron
AAAGGGGTTTGCAATCTCAT+CGG 0.630182 7:+55248417 None:intergenic
CTCATCGGTACCATCAGTTG+GGG 0.631525 7:+55248432 None:intergenic
GAGAATACAGAGACGATCTG+AGG 0.639128 7:+55253198 None:intergenic
GGGGCGTAAGAGTGAATGTG+TGG 0.650517 7:-55248382 MsG0780038909.01.T01:exon
AGACGATCTGAGGTGCAGGT+GGG 0.677394 7:+55253208 None:intergenic
CTCTCGCACAGTTTAAACAG+CGG 0.679533 7:-55253178 MsG0780038909.01.T01:five_prime_UTR
GTTCAAGTTAAGCTCACCGG+TGG 0.687790 7:-55252968 MsG0780038909.01.T01:CDS
GAAGCTGTTGAGTTTCTGAG+AGG 0.702935 7:-55250268 MsG0780038909.01.T01:intron
TATGTGATTAACAGTCAGGG+AGG 0.727021 7:-55253033 MsG0780038909.01.T01:intron
GAGTGACTGAGACTTCGACA+TGG 0.753210 7:-55253146 MsG0780038909.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAATTATTAAGTTA+TGG - Chr7:55250034-55250053 MsG0780038909.01.T01:intron 10.0%
!! ATTTCATAATAAAATTGTTT+GGG + Chr7:55249418-55249437 None:intergenic 10.0%
!! TAATAATTAAAGGAAAAAAA+AGG + Chr7:55248571-55248590 None:intergenic 10.0%
!! TATTTCATAATAAAATTGTT+TGG + Chr7:55249419-55249438 None:intergenic 10.0%
!!! AAACAATTTTATTATGAAAT+AGG - Chr7:55249418-55249437 MsG0780038909.01.T01:intron 10.0%
!!! AACAATTTTATTATGAAATA+GGG - Chr7:55249419-55249438 MsG0780038909.01.T01:intron 10.0%
!!! AACTTAATAATTTTTCTTTT+TGG + Chr7:55250033-55250052 None:intergenic 10.0%
!!! TATTATTTATATGTTTGTTA+AGG + Chr7:55249273-55249292 None:intergenic 10.0%
!!! TTTTAATTAATTATTCATTC+AGG + Chr7:55251605-55251624 None:intergenic 10.0%
!! AAAATTATTCAATAGATAAG+TGG + Chr7:55248832-55248851 None:intergenic 15.0%
!! AAATAAAAAAGTTTAAGCTT+AGG + Chr7:55251521-55251540 None:intergenic 15.0%
!! ATATAGAACATATAGAATAA+GGG + Chr7:55249808-55249827 None:intergenic 15.0%
!! ATCAAAAACATATATATCAT+TGG + Chr7:55251181-55251200 None:intergenic 15.0%
!! ATTTATTAATTGAAACCAAT+GGG - Chr7:55252407-55252426 MsG0780038909.01.T01:intron 15.0%
!! TATATGAAAAATGAAATCAT+GGG + Chr7:55251230-55251249 None:intergenic 15.0%
!! TTATATGAAAAATGAAATCA+TGG + Chr7:55251231-55251250 None:intergenic 15.0%
!!! ACTTATCTATTGAATAATTT+TGG - Chr7:55248831-55248850 MsG0780038909.01.T01:intron 15.0%
!!! ATAATATCTTATTTTTGTGA+TGG - Chr7:55252639-55252658 MsG0780038909.01.T01:intron 15.0%
!!! CTTATCTATTGAATAATTTT+GGG - Chr7:55248832-55248851 MsG0780038909.01.T01:intron 15.0%
!!! TTATCTATTGAATAATTTTG+GGG - Chr7:55248833-55248852 MsG0780038909.01.T01:intron 15.0%
!!! TTGCATTTTCTATTTTTTTT+TGG - Chr7:55251699-55251718 MsG0780038909.01.T01:intron 15.0%
!! AGAGGAATATTTGTATAAAT+AGG + Chr7:55249555-55249574 None:intergenic 20.0%
!! ATGACATGAAAACATAATTA+AGG + Chr7:55249348-55249367 None:intergenic 20.0%
!! ATGCAAATCTTTATCTTTAT+CGG - Chr7:55252444-55252463 MsG0780038909.01.T01:intron 20.0%
!! CATTTATTAATTGAAACCAA+TGG - Chr7:55252406-55252425 MsG0780038909.01.T01:intron 20.0%
!! GATATAGAACATATAGAATA+AGG + Chr7:55249809-55249828 None:intergenic 20.0%
!! TATAACTCATTGAAATAAGA+CGG - Chr7:55251246-55251265 MsG0780038909.01.T01:intron 20.0%
!! TTACCTTTCATAAACTAAAA+GGG + Chr7:55249063-55249082 None:intergenic 20.0%
!! TTTGTTAGCATACATATATT+AGG + Chr7:55253039-55253058 None:intergenic 20.0%
!!! AAATTAGTTAAGCTTTTCAA+AGG - Chr7:55251399-55251418 MsG0780038909.01.T01:intron 20.0%
!!! TTCACTTTTCTATCTAATTT+AGG + Chr7:55250097-55250116 None:intergenic 20.0%
! AAAATGGAAAAAAGACCAAT+AGG - Chr7:55250833-55250852 MsG0780038909.01.T01:intron 25.0%
! AAACAGTAAAGTTCAAAGAT+TGG + Chr7:55252890-55252909 None:intergenic 25.0%
! AAAGGTTGTTAGTTAATTAG+AGG + Chr7:55249573-55249592 None:intergenic 25.0%
! AAATCAATTGAAAGAGCAAT+AGG + Chr7:55249866-55249885 None:intergenic 25.0%
! AAATTCATTGAATCAGATTC+AGG - Chr7:55251299-55251318 MsG0780038909.01.T01:intron 25.0%
! AATCAATTGAAAGAGCAATA+GGG + Chr7:55249865-55249884 None:intergenic 25.0%
! AATTTCAACTCTTGCAAAAT+GGG - Chr7:55249095-55249114 MsG0780038909.01.T01:intron 25.0%
! ACATAAGGAAAGGTAAATAA+TGG + Chr7:55249921-55249940 None:intergenic 25.0%
! AGGAAATTATGAACTGAAAA+TGG - Chr7:55250817-55250836 MsG0780038909.01.T01:intron 25.0%
! ATACATGTAATGCTATTGAT+AGG + Chr7:55252750-55252769 None:intergenic 25.0%
! ATCAAATCACAAAGAACATA+AGG + Chr7:55249936-55249955 None:intergenic 25.0%
! ATTATATGTGATTAACAGTC+AGG - Chr7:55248350-55248369 MsG0780038909.01.T01:three_prime_UTR 25.0%
! ATTATGAAATAGGGAAGAAT+AGG - Chr7:55249428-55249447 MsG0780038909.01.T01:intron 25.0%
! CCTCTCACTTATATAAAAAA+GGG + Chr7:55250323-55250342 None:intergenic 25.0%
! CTTACCTTTCATAAACTAAA+AGG + Chr7:55249064-55249083 None:intergenic 25.0%
! TAAATTGAACTTCCTGTTAT+GGG - Chr7:55253165-55253184 MsG0780038909.01.T01:five_prime_UTR 25.0%
! TAAGCAATAAAAGGAACTTA+TGG - Chr7:55251560-55251579 MsG0780038909.01.T01:intron 25.0%
! TAATTTCAACTCTTGCAAAA+TGG - Chr7:55249094-55249113 MsG0780038909.01.T01:intron 25.0%
! TACATGTAATGCTATTGATA+GGG + Chr7:55252749-55252768 None:intergenic 25.0%
! TACCTTTCATAAACTAAAAG+GGG + Chr7:55249062-55249081 None:intergenic 25.0%
! TCAATTACTTAATCTTGTAC+TGG - Chr7:55251094-55251113 MsG0780038909.01.T01:intron 25.0%
! TCAGATTAATTGTTGAGAAA+GGG - Chr7:55252378-55252397 MsG0780038909.01.T01:intron 25.0%
! TCCTCTCACTTATATAAAAA+AGG + Chr7:55250324-55250343 None:intergenic 25.0%
! TCTAATCAGTAAGCAATAAA+AGG - Chr7:55251551-55251570 MsG0780038909.01.T01:intron 25.0%
! TGCAAATCTTTATCTTTATC+GGG - Chr7:55252445-55252464 MsG0780038909.01.T01:intron 25.0%
! TTAAATTGAACTTCCTGTTA+TGG - Chr7:55253164-55253183 MsG0780038909.01.T01:five_prime_UTR 25.0%
! TTATATGTGATTAACAGTCA+GGG - Chr7:55248351-55248370 MsG0780038909.01.T01:three_prime_UTR 25.0%
! TTATCGGGACAAAAAAATTA+TGG - Chr7:55252460-55252479 MsG0780038909.01.T01:intron 25.0%
! TTGCAGTTTCATTATTTGAA+TGG - Chr7:55252496-55252515 MsG0780038909.01.T01:intron 25.0%
!! ATGTTTGTTAAGGTAGTTTA+TGG + Chr7:55249263-55249282 None:intergenic 25.0%
!! CCTGAGCATTTTATTAAAAT+CGG - Chr7:55248649-55248668 MsG0780038909.01.T01:intron 25.0%
!!! ATATTTTGATAGGAAACTAG+TGG - Chr7:55250696-55250715 MsG0780038909.01.T01:intron 25.0%
!!! ATCTTATTTTTGTGATGGTT+GGG - Chr7:55252644-55252663 MsG0780038909.01.T01:intron 25.0%
!!! CGATTTTAATAAAATGCTCA+GGG + Chr7:55248651-55248670 None:intergenic 25.0%
!!! GGTTCTTGTTATATTTTGAT+AGG - Chr7:55250686-55250705 MsG0780038909.01.T01:intron 25.0%
!!! TATCTTATTTTTGTGATGGT+TGG - Chr7:55252643-55252662 MsG0780038909.01.T01:intron 25.0%
!!! TATTAAGTTATGGTTTGTTG+TGG - Chr7:55250044-55250063 MsG0780038909.01.T01:intron 25.0%
!!! TGATTTGATCTTTGTTGTTT+GGG - Chr7:55249947-55249966 MsG0780038909.01.T01:intron 25.0%
!!! TGCTTTAGAAAAGATTAGAT+GGG + Chr7:55252175-55252194 None:intergenic 25.0%
!!! TTTACTCTTAAATTTGCTGA+AGG - Chr7:55248949-55248968 MsG0780038909.01.T01:intron 25.0%
AAAATAAGCTCAATCCAAAC+AGG + Chr7:55249146-55249165 None:intergenic 30.0%
AAACAACGATGACATGTAAT+AGG - Chr7:55252521-55252540 MsG0780038909.01.T01:intron 30.0%
AAACATAATTAAGGCTCGTT+TGG + Chr7:55249339-55249358 None:intergenic 30.0%
AACAATGCATAGTATATGCA+AGG + Chr7:55248731-55248750 None:intergenic 30.0%
AATAATGAAACTGCAATCTC+AGG + Chr7:55252492-55252511 None:intergenic 30.0%
AATGAAAAATGCAGCTAAAC+AGG + Chr7:55252608-55252627 None:intergenic 30.0%
AATTTCAGTGTTTCATGCTT+TGG + Chr7:55252206-55252225 None:intergenic 30.0%
ACAATGCTTAGTAACTAAAC+TGG + Chr7:55253070-55253089 None:intergenic 30.0%
AGAAGAAGAAACCCTAAAAA+AGG + Chr7:55248458-55248477 None:intergenic 30.0%
AGATAGAAGATAGACTTGAA+TGG - Chr7:55251977-55251996 MsG0780038909.01.T01:intron 30.0%
AGCACGAAAACAAAATATCA+TGG + Chr7:55252079-55252098 None:intergenic 30.0%
AGGAGAATATACAAATAGAG+TGG + Chr7:55249535-55249554 None:intergenic 30.0%
ATCACAAAGAACATAAGGAA+AGG + Chr7:55249931-55249950 None:intergenic 30.0%
ATCTAATACAGTAGTTCAGT+TGG - Chr7:55251921-55251940 MsG0780038909.01.T01:intron 30.0%
ATTTCAGTGTTTCATGCTTT+GGG + Chr7:55252205-55252224 None:intergenic 30.0%
CAGATTAATTGTTGAGAAAG+GGG - Chr7:55252379-55252398 MsG0780038909.01.T01:intron 30.0%
GAGAAAAAACTCTCATTCAA+AGG - Chr7:55249450-55249469 MsG0780038909.01.T01:intron 30.0%
GTCAGATTAATTGTTGAGAA+AGG - Chr7:55252377-55252396 MsG0780038909.01.T01:intron 30.0%
TAGTCAATTGATAGAGCATA+TGG - Chr7:55252281-55252300 MsG0780038909.01.T01:intron 30.0%
TAGTGTAGATGACTCATTAA+GGG - Chr7:55249120-55249139 MsG0780038909.01.T01:intron 30.0%
TATTACATGTCATCGTTGTT+TGG + Chr7:55252522-55252541 None:intergenic 30.0%
TCAGACAAGACATTTATTCA+AGG + Chr7:55252235-55252254 None:intergenic 30.0%
TTAGTGTAGATGACTCATTA+AGG - Chr7:55249119-55249138 MsG0780038909.01.T01:intron 30.0%
TTATATAAAAAAGGGCAACC+TGG + Chr7:55250315-55250334 None:intergenic 30.0%
TTGAGCAATATATAAGTGAG+AGG - Chr7:55250119-55250138 MsG0780038909.01.T01:intron 30.0%
TTGATACTGCTTTAACACTT+TGG - Chr7:55251670-55251689 MsG0780038909.01.T01:intron 30.0%
TTGATAGAGCATATGGAATT+AGG - Chr7:55252288-55252307 MsG0780038909.01.T01:intron 30.0%
TTGTGCTTCATAAAACTCTT+TGG - Chr7:55248879-55248898 MsG0780038909.01.T01:intron 30.0%
TTTACACAATTTCTGTGTTG+AGG - Chr7:55252558-55252577 MsG0780038909.01.T01:intron 30.0%
TTTCGAACTTCTTATGTGTT+GGG - Chr7:55249390-55249409 MsG0780038909.01.T01:intron 30.0%
! AAACTGGTAATGAAAGTAAG+TGG + Chr7:55248505-55248524 None:intergenic 30.0%
! AAGGAAAGGTAAATAATGGA+AGG + Chr7:55249917-55249936 None:intergenic 30.0%
! ATTTAGCTCACTAGTGAAAA+AGG + Chr7:55252697-55252716 None:intergenic 30.0%
! ATTTGTTGAATTTCAGTGAC+AGG - Chr7:55251053-55251072 MsG0780038909.01.T01:intron 30.0%
! GACTTGTCTGTTTTATATAG+TGG - Chr7:55249669-55249688 MsG0780038909.01.T01:intron 30.0%
! TTTTCGAACTTCTTATGTGT+TGG - Chr7:55249389-55249408 MsG0780038909.01.T01:intron 30.0%
!! CCGATTTTAATAAAATGCTC+AGG + Chr7:55248652-55248671 None:intergenic 30.0%
!! CTGCTTTAGAAAAGATTAGA+TGG + Chr7:55252176-55252195 None:intergenic 30.0%
!! GTGATTTGATCTTTGTTGTT+TGG - Chr7:55249946-55249965 MsG0780038909.01.T01:intron 30.0%
!! TAATGTTTCTAGATTCACAC+AGG + Chr7:55251819-55251838 None:intergenic 30.0%
!! TGTCTGTTTTATATAGTGGA+AGG - Chr7:55249673-55249692 MsG0780038909.01.T01:intron 30.0%
!! TTGAAATAAGACGGATTTTC+AGG - Chr7:55251255-55251274 MsG0780038909.01.T01:intron 30.0%
!!! AGACAAGGTAATCCTTTTTT+AGG - Chr7:55248443-55248462 MsG0780038909.01.T01:CDS 30.0%
!!! CCCTTTTTTATATAAGTGAG+AGG - Chr7:55250320-55250339 MsG0780038909.01.T01:CDS 30.0%
!!! GAAAGAAACAGTTTTGGATT+TGG - Chr7:55248376-55248395 MsG0780038909.01.T01:three_prime_UTR 30.0%
!!! GACAAGGTAATCCTTTTTTA+GGG - Chr7:55248444-55248463 MsG0780038909.01.T01:CDS 30.0%
!!! TACTGTTTTTGCTAAAATGC+AGG - Chr7:55252902-55252921 MsG0780038909.01.T01:intron 30.0%
!!! TCGTCTCAATGATTTGTTTT+AGG - Chr7:55250007-55250026 MsG0780038909.01.T01:intron 30.0%
!!! TTGAGCTTATTTTGAGCTTA+TGG - Chr7:55249153-55249172 MsG0780038909.01.T01:intron 30.0%
AACAACCTCTTGTGTAAAAC+AGG - Chr7:55250217-55250236 MsG0780038909.01.T01:intron 35.0%
AACAAGAACCCAAAACCTTA+AGG + Chr7:55250676-55250695 None:intergenic 35.0%
AAGAATAAGAGTGACTTGAG+TGG + Chr7:55250889-55250908 None:intergenic 35.0%
AATCACTTACGCTAAGTAGT+TGG - Chr7:55248789-55248808 MsG0780038909.01.T01:intron 35.0%
ACAACCTCTTGTGTAAAACA+GGG - Chr7:55250218-55250237 MsG0780038909.01.T01:intron 35.0%
ACATGTAATAGGCATGTCAA+TGG - Chr7:55252532-55252551 MsG0780038909.01.T01:intron 35.0%
ATCACTTACGCTAAGTAGTT+GGG - Chr7:55248790-55248809 MsG0780038909.01.T01:intron 35.0%
ATTTCACTGAGCTAAAGCAT+GGG - Chr7:55252857-55252876 MsG0780038909.01.T01:intron 35.0%
CATCTTTACCCAAAACCTTA+AGG + Chr7:55250362-55250381 None:intergenic 35.0%
CTATATCCTAACAATATGCG+CGG - Chr7:55249822-55249841 MsG0780038909.01.T01:intron 35.0%
CTCAATAAGCTTGACAAGAA+AGG + Chr7:55251865-55251884 None:intergenic 35.0%
GAAACCATCAAAGAAGTTGT+GGG - Chr7:55250789-55250808 MsG0780038909.01.T01:intron 35.0%
GATAACTATCCAGTTTGGAT+CGG - Chr7:55248976-55248995 MsG0780038909.01.T01:intron 35.0%
GATGTGATAACTATCCAGTT+TGG - Chr7:55248971-55248990 MsG0780038909.01.T01:intron 35.0%
TACATACAAGAACTTCCCAT+TGG + Chr7:55252425-55252444 None:intergenic 35.0%
TATTTCACTGAGCTAAAGCA+TGG - Chr7:55252856-55252875 MsG0780038909.01.T01:intron 35.0%
TCACTTAGACTTGTAAACGT+TGG + Chr7:55249510-55249529 None:intergenic 35.0%
TCCGTGTAAATGCAAACATT+GGG + Chr7:55248923-55248942 None:intergenic 35.0%
TGAAACCATCAAAGAAGTTG+TGG - Chr7:55250788-55250807 MsG0780038909.01.T01:intron 35.0%
TGTTAAAGCAGTATCAACGT+GGG + Chr7:55251667-55251686 None:intergenic 35.0%
TTGCATCGTATTGTTTGCAT+GGG - Chr7:55251006-55251025 MsG0780038909.01.T01:intron 35.0%
TTGGCAAAATTCGTTGACAA+AGG - Chr7:55248395-55248414 MsG0780038909.01.T01:exon 35.0%
TTTGCATCGTATTGTTTGCA+TGG - Chr7:55251005-55251024 MsG0780038909.01.T01:intron 35.0%
! AAAAGCACAATGACAAGAAG+AGG + Chr7:55250988-55251007 None:intergenic 35.0%
! AGGATTAGATGGTAATGAAG+TGG - Chr7:55251275-55251294 MsG0780038909.01.T01:intron 35.0%
! CTAACTCCCTTTTATTCCAT+GGG - Chr7:55249600-55249619 MsG0780038909.01.T01:intron 35.0%
! TAAAATCGGCTCATGTTTCA+CGG - Chr7:55248663-55248682 MsG0780038909.01.T01:intron 35.0%
! TAACAAGAGTATGCTATGAG+TGG + Chr7:55250927-55250946 None:intergenic 35.0%
! TAACTCCCTTTTATTCCATG+GGG - Chr7:55249601-55249620 MsG0780038909.01.T01:intron 35.0%
! TATCATTGGCTGTGAAAACA+AGG + Chr7:55251167-55251186 None:intergenic 35.0%
! TCTAACTCCCTTTTATTCCA+TGG - Chr7:55249599-55249618 MsG0780038909.01.T01:intron 35.0%
! TTGAAACTACAGTTTTCCGA+GGG + Chr7:55251955-55251974 None:intergenic 35.0%
!! TTTGAAACTACAGTTTTCCG+AGG + Chr7:55251956-55251975 None:intergenic 35.0%
!!! AGCCCCTTTTAGTTTATGAA+AGG - Chr7:55249057-55249076 MsG0780038909.01.T01:intron 35.0%
!!! GAATAATTTTGGGGCGTTTT+TGG - Chr7:55248842-55248861 MsG0780038909.01.T01:intron 35.0%
!!! TAAGGTTTTGGGTAAAGATG+TGG - Chr7:55250362-55250381 MsG0780038909.01.T01:intron 35.0%
!!! TCACGGCTTAATCACTTTTT+TGG - Chr7:55248680-55248699 MsG0780038909.01.T01:intron 35.0%
AAAGGGGTTTGCAATCTCAT+CGG + Chr7:55252973-55252992 None:intergenic 40.0%
AACCCAAAACCTTAAGGCAT+GGG + Chr7:55250670-55250689 None:intergenic 40.0%
AAGAAGAGGAACAGTGAGAA+TGG + Chr7:55250974-55250993 None:intergenic 40.0%
AAGGCTCACATTTGTCACAT+TGG - Chr7:55250597-55250616 MsG0780038909.01.T01:intron 40.0%
AAGGGAGTTAGAGTAGTGAA+AGG + Chr7:55249591-55249610 None:intergenic 40.0%
AATGGAAGGCTTCAGAATCT+AGG + Chr7:55249903-55249922 None:intergenic 40.0%
AGCATTTGAACTCCCATAAC+AGG + Chr7:55253180-55253199 None:intergenic 40.0%
AGTAGTTGGGGCTTAACTTT+AGG - Chr7:55248803-55248822 MsG0780038909.01.T01:intron 40.0%
AGTGAGAATGGTGATTTGAG+TGG + Chr7:55250962-55250981 None:intergenic 40.0%
ATAAGAGTGACTTGAGTGGT+AGG + Chr7:55250885-55250904 None:intergenic 40.0%
ATGAGTCATGACAAGTTAGC+TGG + Chr7:55252350-55252369 None:intergenic 40.0%
ATGCCATTGTTGGGTTATGA+GGG + Chr7:55250444-55250463 None:intergenic 40.0%
ATTTGGCGGAAAACAAGTGT+GGG - Chr7:55249713-55249732 MsG0780038909.01.T01:intron 40.0%
CAGAATCTAGGCTATCAGAA+AGG + Chr7:55249891-55249910 None:intergenic 40.0%
CATAGTATATGCAAGGTCAG+TGG + Chr7:55248724-55248743 None:intergenic 40.0%
CATGCGTTAAACAAGAGTGA+GGG + Chr7:55250770-55250789 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - Chr7:55250249-55250268 MsG0780038909.01.T01:intron 40.0%
CGTGATCATATTCCCGTATT+TGG - Chr7:55249696-55249715 MsG0780038909.01.T01:intron 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - Chr7:55250223-55250242 MsG0780038909.01.T01:intron 40.0%
CTTGTCAAGCTTATTGAGCT+TGG - Chr7:55251867-55251886 MsG0780038909.01.T01:intron 40.0%
GAAAAGACAGTCACTCAACA+TGG - Chr7:55251740-55251759 MsG0780038909.01.T01:intron 40.0%
GATCATATTCCCGTATTTGG+CGG - Chr7:55249699-55249718 MsG0780038909.01.T01:intron 40.0%
GCCCAATGTTTGCATTTACA+CGG - Chr7:55248919-55248938 MsG0780038909.01.T01:intron 40.0%
GCTAAAATGCAGGTTTGTAG+AGG - Chr7:55252912-55252931 MsG0780038909.01.T01:intron 40.0%
GTAAAAAATAGCACTCCCCA+TGG + Chr7:55249619-55249638 None:intergenic 40.0%
GTCCGTGTAAATGCAAACAT+TGG + Chr7:55248924-55248943 None:intergenic 40.0%
GTGTTAAAGCAGTATCAACG+TGG + Chr7:55251668-55251687 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - Chr7:55250174-55250193 MsG0780038909.01.T01:intron 40.0%
TAAGAGTGACTTGAGTGGTA+GGG + Chr7:55250884-55250903 None:intergenic 40.0%
TACCCAAAACCTTAAGGCAT+TGG + Chr7:55250356-55250375 None:intergenic 40.0%
TATGTGATTAACAGTCAGGG+AGG - Chr7:55248354-55248373 MsG0780038909.01.T01:three_prime_UTR 40.0%
TATTTGGCGGAAAACAAGTG+TGG - Chr7:55249712-55249731 MsG0780038909.01.T01:intron 40.0%
TCACTTACGCTAAGTAGTTG+GGG - Chr7:55248791-55248810 MsG0780038909.01.T01:intron 40.0%
TCAGTGACAGGAACTTTGAA+AGG - Chr7:55251065-55251084 MsG0780038909.01.T01:intron 40.0%
TCATGACAAGTTAGCTGGTT+AGG + Chr7:55252345-55252364 None:intergenic 40.0%
TCATGCGTTAAACAAGAGTG+AGG + Chr7:55250771-55250790 None:intergenic 40.0%
TCGAACTCTTGTTCAACCAT+TGG + Chr7:55250472-55250491 None:intergenic 40.0%
TTCTTGTGTCGAAAGTCTAC+TGG - Chr7:55250503-55250522 MsG0780038909.01.T01:intron 40.0%
TTGATAGGAAACTAGTGGTC+AGG - Chr7:55250701-55250720 MsG0780038909.01.T01:intron 40.0%
TTGTTTGCATGGGTAATGAG+AGG - Chr7:55251016-55251035 MsG0780038909.01.T01:intron 40.0%
! AACCCAATGCCTTAAGGTTT+TGG - Chr7:55250350-55250369 MsG0780038909.01.T01:intron 40.0%
! ACCCAAAACCTTAAGGCATT+GGG + Chr7:55250355-55250374 None:intergenic 40.0%
! ACCCAATGCCTTAAGGTTTT+GGG - Chr7:55250351-55250370 MsG0780038909.01.T01:intron 40.0%
! AGGGAGGAAAGAAACAGTTT+TGG - Chr7:55248370-55248389 MsG0780038909.01.T01:three_prime_UTR 40.0%
! CTTACCCTGTTTTACACAAG+AGG + Chr7:55250225-55250244 None:intergenic 40.0%
! GGTAAATACTACAGAGTACC+AGG - Chr7:55251140-55251159 MsG0780038909.01.T01:intron 40.0%
! GTAGTTTTCAACGGATCATC+AGG + Chr7:55252108-55252127 None:intergenic 40.0%
! GTCTGATCGGTAGTTTTCAA+CGG + Chr7:55252117-55252136 None:intergenic 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + Chr7:55250214-55250233 None:intergenic 40.0%
!! ACCTTAAGGCATTGGGTTTA+TGG + Chr7:55250348-55250367 None:intergenic 40.0%
!! ACTTGTTTTCCGCCAAATAC+GGG + Chr7:55249711-55249730 None:intergenic 40.0%
!! CACTTGTTTTCCGCCAAATA+CGG + Chr7:55249712-55249731 None:intergenic 40.0%
!! CCTTAAGGCATTGGGTTTAT+GGG + Chr7:55250347-55250366 None:intergenic 40.0%
!! GACGGATTTTCAGGATTAGA+TGG - Chr7:55251264-55251283 MsG0780038909.01.T01:intron 40.0%
!! TATGGTTTGTTGTGGCAAGT+GGG - Chr7:55250052-55250071 MsG0780038909.01.T01:intron 40.0%
!! TCAGTTGGTAAATTCACCCT+CGG - Chr7:55251936-55251955 MsG0780038909.01.T01:intron 40.0%
!! TTATGGTTTGTTGTGGCAAG+TGG - Chr7:55250051-55250070 MsG0780038909.01.T01:intron 40.0%
!!! ATCACTTTTTTGGTGGTGTC+CGG - Chr7:55248690-55248709 MsG0780038909.01.T01:intron 40.0%
!!! CGGCTTAATCACTTTTTTGG+TGG - Chr7:55248683-55248702 MsG0780038909.01.T01:intron 40.0%
AACAATGGCATCAGAGCCAA+TGG - Chr7:55250453-55250472 MsG0780038909.01.T01:intron 45.0%
AACCCCTTTCTTCAACCAGA+TGG - Chr7:55252984-55253003 MsG0780038909.01.T01:CDS 45.0%
AACGTTGGTGTATAGAGCAG+TGG + Chr7:55249495-55249514 None:intergenic 45.0%
AAGTCCCAAAAGAGCAGTGT+TGG - Chr7:55251430-55251449 MsG0780038909.01.T01:intron 45.0%
ACCCAAAACCTTAAGGCATG+GGG + Chr7:55250669-55250688 None:intergenic 45.0%
ACCCCTTTCTTCAACCAGAT+GGG - Chr7:55252985-55253004 MsG0780038909.01.T01:CDS 45.0%
ACCGATCAGACAAGAAGTCT+TGG - Chr7:55252126-55252145 MsG0780038909.01.T01:intron 45.0%
ACCTTAAGGCATGGGGTTTA+TGG + Chr7:55250662-55250681 None:intergenic 45.0%
ACTAGTGGTCAGGTATGGAT+AGG - Chr7:55250711-55250730 MsG0780038909.01.T01:intron 45.0%
AGACTTTCGACACAAGAAGC+CGG + Chr7:55250501-55250520 None:intergenic 45.0%
AGCACTCCCCATGGAATAAA+AGG + Chr7:55249610-55249629 None:intergenic 45.0%
AGCTAGAAACCGATCCAAAC+TGG + Chr7:55248988-55249007 None:intergenic 45.0%
AGGAAACTAGTGGTCAGGTA+TGG - Chr7:55250706-55250725 MsG0780038909.01.T01:intron 45.0%
AGGATTACCTTGTCTACCAC+CGG + Chr7:55248438-55248457 None:intergenic 45.0%
ATATAAGTGAGAGGACCCGA+GGG - Chr7:55250128-55250147 MsG0780038909.01.T01:intron 45.0%
ATCTCATCGGTACCATCAGT+TGG + Chr7:55252960-55252979 None:intergenic 45.0%
CAGTCACTCAACATGGACAA+AGG - Chr7:55251747-55251766 MsG0780038909.01.T01:intron 45.0%
CCAATAGGTCAAGCAACCAA+CGG - Chr7:55250848-55250867 MsG0780038909.01.T01:intron 45.0%
CCCATAAACCCAATGCCTTA+AGG - Chr7:55250344-55250363 MsG0780038909.01.T01:intron 45.0%
CCTTAAGGCATGGGGTTTAT+GGG + Chr7:55250661-55250680 None:intergenic 45.0%
CTCTCGCACAGTTTAAACAG+CGG - Chr7:55248209-55248228 MsG0780038909.01.T01:three_prime_UTR 45.0%
CTTGTCATGACTCATGAGTC+AGG - Chr7:55252355-55252374 MsG0780038909.01.T01:intron 45.0%
GAAAGTCTACTGGACAATGG+TGG - Chr7:55250513-55250532 MsG0780038909.01.T01:intron 45.0%
GAACCCAAAACCTTAAGGCA+TGG + Chr7:55250671-55250690 None:intergenic 45.0%
GAAGCTGTTGAGTTTCTGAG+AGG - Chr7:55251119-55251138 MsG0780038909.01.T01:intron 45.0%
GAGAATACAGAGACGATCTG+AGG + Chr7:55248192-55248211 None:intergenic 45.0%
GATGCCATTGTTGGGTTATG+AGG + Chr7:55250445-55250464 None:intergenic 45.0%
GCACTCCCCATGGAATAAAA+GGG + Chr7:55249609-55249628 None:intergenic 45.0%
GCCAAGACTTCTTGTCTGAT+CGG + Chr7:55252130-55252149 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - Chr7:55250248-55250267 MsG0780038909.01.T01:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - Chr7:55250245-55250264 MsG0780038909.01.T01:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG - Chr7:55250180-55250199 MsG0780038909.01.T01:intron 45.0%
GTCGAAAGTCTACTGGACAA+TGG - Chr7:55250510-55250529 MsG0780038909.01.T01:intron 45.0%
TACCAACTGAGCTAAGCTCA+CGG - Chr7:55248753-55248772 MsG0780038909.01.T01:intron 45.0%
TACGAGTGAGGTGAGTTACA+AGG - Chr7:55250578-55250597 MsG0780038909.01.T01:intron 45.0%
TATATAAGTGAGAGGACCCG+AGG - Chr7:55250127-55250146 MsG0780038909.01.T01:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - Chr7:55250181-55250200 MsG0780038909.01.T01:intron 45.0%
TCTCATCGGTACCATCAGTT+GGG + Chr7:55252959-55252978 None:intergenic 45.0%
TGACTCATTAAGGGCCTGTT+TGG - Chr7:55249129-55249148 MsG0780038909.01.T01:intron 45.0%
TGCCATTGTTGGGTTATGAG+GGG + Chr7:55250443-55250462 None:intergenic 45.0%
TGCTCCCACAACTTCTTTGA+TGG + Chr7:55250796-55250815 None:intergenic 45.0%
TGGTTGAACAAGAGTTCGAC+CGG - Chr7:55250473-55250492 MsG0780038909.01.T01:intron 45.0%
TTCTGTGTTGAGGAGTTGCA+AGG - Chr7:55252568-55252587 MsG0780038909.01.T01:intron 45.0%
TTGACACCCACCACATGAAT+GGG + Chr7:55250552-55250571 None:intergenic 45.0%
! AACCCCATGCCTTAAGGTTT+TGG - Chr7:55250664-55250683 MsG0780038909.01.T01:intron 45.0%
! AAGCACCAACACTGCTCTTT+TGG + Chr7:55251438-55251457 None:intergenic 45.0%
! ACCCCATGCCTTAAGGTTTT+GGG - Chr7:55250665-55250684 MsG0780038909.01.T01:intron 45.0%
! AGCACCAACACTGCTCTTTT+GGG + Chr7:55251437-55251456 None:intergenic 45.0%
! CAAAGAAGTTGTGGGAGCAT+AGG - Chr7:55250797-55250816 MsG0780038909.01.T01:intron 45.0%
! GGTGTTCAAGTTAAGCTCAC+CGG - Chr7:55248416-55248435 MsG0780038909.01.T01:CDS 45.0%
!! ATTCATGTGGTGGGTGTCAA+CGG - Chr7:55250552-55250571 MsG0780038909.01.T01:intron 45.0%
!! ATTGGCTCTGATGCCATTGT+TGG + Chr7:55250454-55250473 None:intergenic 45.0%
!! GAGTGACTGTCTTTTCAAGC+AGG + Chr7:55251736-55251755 None:intergenic 45.0%
!! TGTCAGAAGCGTTAACGCAT+AGG + Chr7:55253117-55253136 None:intergenic 45.0%
!! TTGGCTCTGATGCCATTGTT+GGG + Chr7:55250453-55250472 None:intergenic 45.0%
!!! TCACTTTTTTGGTGGTGTCC+GGG - Chr7:55248691-55248710 MsG0780038909.01.T01:intron 45.0%
!! AAAAAAAAAAAAAAAACAAT+TGG + Chr7:55251327-55251346 None:intergenic 5.0%
!! AAAAAAAAAAAAAAACAATT+GGG + Chr7:55251326-55251345 None:intergenic 5.0%
!! CTATAAAAAATAATAATTAA+AGG + Chr7:55248581-55248600 None:intergenic 5.0%
!! TTAAAAAAAAAAAAAAAAAC+TGG + Chr7:55248521-55248540 None:intergenic 5.0%
!!! CTTTAATTATTATTTTTTAT+AGG - Chr7:55248579-55248598 MsG0780038909.01.T01:intron 5.0%
!!! TTTTTGATATTTATAAATTT+TGG - Chr7:55251193-55251212 MsG0780038909.01.T01:intron 5.0%
AAGGTCAGTGGTTTGAACCC+CGG + Chr7:55248712-55248731 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG - Chr7:55248754-55248773 MsG0780038909.01.T01:intron 50.0%
ACTGGACAATGGTGGTCAAG+CGG - Chr7:55250521-55250540 MsG0780038909.01.T01:intron 50.0%
ATGCTTGTGTCCCCAACTGA+TGG - Chr7:55252945-55252964 MsG0780038909.01.T01:intron 50.0%
ATTCACTCTTACGCCCCATC+TGG + Chr7:55253002-55253021 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + Chr7:55250158-55250177 None:intergenic 50.0%
CCCATAAACCCCATGCCTTA+AGG - Chr7:55250658-55250677 MsG0780038909.01.T01:intron 50.0%
CCCCATCTGGTTGAAGAAAG+GGG + Chr7:55252989-55253008 None:intergenic 50.0%
CCCCTTTCTTCAACCAGATG+GGG - Chr7:55252986-55253005 MsG0780038909.01.T01:CDS 50.0%
CTCATCGGTACCATCAGTTG+GGG + Chr7:55252958-55252977 None:intergenic 50.0%
CTCCCCTCATAACCCAACAA+TGG - Chr7:55250438-55250457 MsG0780038909.01.T01:intron 50.0%
GAGAAGCCGCGCATATTGTT+AGG + Chr7:55249831-55249850 None:intergenic 50.0%
GAGCAACCACACAAGTGAGT+TGG + Chr7:55250391-55250410 None:intergenic 50.0%
GAGTGACTGAGACTTCGACA+TGG - Chr7:55248241-55248260 MsG0780038909.01.T01:three_prime_UTR 50.0%
GCCCCATCTGGTTGAAGAAA+GGG + Chr7:55252990-55253009 None:intergenic 50.0%
GGTTGAACAAGAGTTCGACC+GGG - Chr7:55250474-55250493 MsG0780038909.01.T01:intron 50.0%
GTTGACACCCACCACATGAA+TGG + Chr7:55250553-55250572 None:intergenic 50.0%
TATAAGTGAGAGGACCCGAG+GGG - Chr7:55250129-55250148 MsG0780038909.01.T01:intron 50.0%
TGGCTGTGAAAACAAGGTCC+TGG + Chr7:55251161-55251180 None:intergenic 50.0%
TGGTGTCCAACTCACTTGTG+TGG - Chr7:55250382-55250401 MsG0780038909.01.T01:intron 50.0%
TGGTTGCTCTTGTCCCAATG+TGG - Chr7:55250402-55250421 MsG0780038909.01.T01:intron 50.0%
! AGAGCAATAGGGAGCACACA+AGG + Chr7:55249854-55249873 None:intergenic 50.0%
! CCGTTGGTTGCTTGACCTAT+TGG + Chr7:55250851-55250870 None:intergenic 50.0%
! CCTGCAAGTTTGAAGCTGCA+CGG - Chr7:55252782-55252801 MsG0780038909.01.T01:intron 50.0%
! GAGCAATAGGGAGCACACAA+GGG + Chr7:55249853-55249872 None:intergenic 50.0%
! GAGCAGTGGCTCTGTTGTAA+AGG + Chr7:55249481-55249500 None:intergenic 50.0%
! GTTCAAGTTAAGCTCACCGG+TGG - Chr7:55248419-55248438 MsG0780038909.01.T01:CDS 50.0%
!!! CACTTTTTTGGTGGTGTCCG+GGG - Chr7:55248692-55248711 MsG0780038909.01.T01:intron 50.0%
!!! GGGGCGTTTTTGGTGAGAAT+GGG - Chr7:55248852-55248871 MsG0780038909.01.T01:intron 50.0%
!!! TGGGGCGTTTTTGGTGAGAA+TGG - Chr7:55248851-55248870 MsG0780038909.01.T01:intron 50.0%
AACAAGAGTTCGACCGGGAC+CGG - Chr7:55250479-55250498 MsG0780038909.01.T01:intron 55.0%
AAGCTCACCGGTGGTAGACA+AGG - Chr7:55248428-55248447 MsG0780038909.01.T01:CDS 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - Chr7:55250193-55250212 MsG0780038909.01.T01:intron 55.0%
ACTAGAGCTCCCGCATATGC+AGG + Chr7:55250289-55250308 None:intergenic 55.0%
CATATGCAGGGTCTGGGAAG+GGG + Chr7:55250276-55250295 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+GGG - Chr7:55248755-55248774 MsG0780038909.01.T01:intron 55.0%
CCGTGCAGCTTCAAACTTGC+AGG + Chr7:55252785-55252804 None:intergenic 55.0%
CCTGGGGGATCATCCACATT+GGG + Chr7:55250418-55250437 None:intergenic 55.0%
CGCATAGGAGAGTCACGACT+AGG + Chr7:55253102-55253121 None:intergenic 55.0%
CGCCCCATCTGGTTGAAGAA+AGG + Chr7:55252991-55253010 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG + Chr7:55250288-55250307 None:intergenic 55.0%
CTTCCCAGACCCTGCATATG+CGG - Chr7:55250276-55250295 MsG0780038909.01.T01:CDS 55.0%
GAGTGACTTGAGTGGTAGGG+AGG + Chr7:55250881-55250900 None:intergenic 55.0%
GCAGGTCCCATTCATGTGGT+GGG - Chr7:55250543-55250562 MsG0780038909.01.T01:intron 55.0%
GCATATGCAGGGTCTGGGAA+GGG + Chr7:55250277-55250296 None:intergenic 55.0%
GGGGCGTAAGAGTGAATGTG+TGG - Chr7:55253005-55253024 MsG0780038909.01.T01:CDS 55.0%
GTAGGGAGGTTGTAAGCCGT+TGG + Chr7:55250867-55250886 None:intergenic 55.0%
TGTTGTGGCAAGTGGGTGTG+AGG - Chr7:55250059-55250078 MsG0780038909.01.T01:intron 55.0%
TTCCCAGACCCTGCATATGC+GGG - Chr7:55250277-55250296 MsG0780038909.01.T01:CDS 55.0%
TTGGGTTATGAGGGGAGCCT+GGG + Chr7:55250435-55250454 None:intergenic 55.0%
! ACAGAGACGATCTGAGGTGC+AGG + Chr7:55248186-55248205 None:intergenic 55.0%
! AGACGATCTGAGGTGCAGGT+GGG + Chr7:55248182-55248201 None:intergenic 55.0%
AGCGGCAGGTCCCATTCATG+TGG - Chr7:55250539-55250558 MsG0780038909.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - Chr7:55250147-55250166 MsG0780038909.01.T01:intron 60.0%
CCCAATGTGGATGATCCCCC+AGG - Chr7:55250415-55250434 MsG0780038909.01.T01:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG + Chr7:55248758-55248777 None:intergenic 60.0%
CGCATATGCAGGGTCTGGGA+AGG + Chr7:55250278-55250297 None:intergenic 60.0%
CTCCCGCATATGCAGGGTCT+GGG + Chr7:55250282-55250301 None:intergenic 60.0%
GACAATGGTGGTCAAGCGGC+AGG - Chr7:55250525-55250544 MsG0780038909.01.T01:intron 60.0%
GCCTGGGGGATCATCCACAT+TGG + Chr7:55250419-55250438 None:intergenic 60.0%
GCTAAGCTCACGGGGACTCA+CGG - Chr7:55248763-55248782 MsG0780038909.01.T01:intron 60.0%
GGCAGGTCCCATTCATGTGG+TGG - Chr7:55250542-55250561 MsG0780038909.01.T01:intron 60.0%
GTTGCGCCAAGGTTACCCCT+CGG + Chr7:55250147-55250166 None:intergenic 60.0%
GTTGGGTTATGAGGGGAGCC+TGG + Chr7:55250436-55250455 None:intergenic 60.0%
TCGACACAAGAAGCCGGTCC+CGG + Chr7:55250495-55250514 None:intergenic 60.0%
TGGGAAGGGGTCCCACCATT+TGG + Chr7:55250263-55250282 None:intergenic 60.0%
TGGGTTATGAGGGGAGCCTG+GGG + Chr7:55250434-55250453 None:intergenic 60.0%
TGTCAACGGCGGTACGAGTG+AGG - Chr7:55250566-55250585 MsG0780038909.01.T01:intron 60.0%
TTGCGCCAAGGTTACCCCTC+GGG + Chr7:55250146-55250165 None:intergenic 60.0%
! GAGACGATCTGAGGTGCAGG+TGG + Chr7:55248183-55248202 None:intergenic 60.0%
!! CATGTGGTGGGTGTCAACGG+CGG - Chr7:55250555-55250574 MsG0780038909.01.T01:intron 60.0%
GAGGACCCGAGGGGTAACCT+TGG - Chr7:55250138-55250157 MsG0780038909.01.T01:intron 65.0%
GCTCCCGCATATGCAGGGTC+TGG + Chr7:55250283-55250302 None:intergenic 65.0%
GGGTTATGAGGGGAGCCTGG+GGG + Chr7:55250433-55250452 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+AGG - Chr7:55250294-55250313 MsG0780038909.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 55248161 55253248 55248161 ID=MsG0780038909.01;Name=MsG0780038909.01
Chr7 mRNA 55248161 55253248 55248161 ID=MsG0780038909.01.T01;Parent=MsG0780038909.01;Name=MsG0780038909.01.T01;_AED=0.45;_eAED=0.45;_QI=99|1|1|1|1|1|5|235|99
Chr7 exon 55248161 55248485 55248161 ID=MsG0780038909.01.T01:exon:7750;Parent=MsG0780038909.01.T01
Chr7 exon 55249254 55249306 55249254 ID=MsG0780038909.01.T01:exon:7749;Parent=MsG0780038909.01.T01
Chr7 exon 55250269 55250340 55250269 ID=MsG0780038909.01.T01:exon:7748;Parent=MsG0780038909.01.T01
Chr7 exon 55252960 55253041 55252960 ID=MsG0780038909.01.T01:exon:7747;Parent=MsG0780038909.01.T01
Chr7 exon 55253147 55253248 55253147 ID=MsG0780038909.01.T01:exon:7746;Parent=MsG0780038909.01.T01
Chr7 five_prime_UTR 55253150 55253248 55253150 ID=MsG0780038909.01.T01:five_prime_utr;Parent=MsG0780038909.01.T01
Chr7 CDS 55253147 55253149 55253147 ID=MsG0780038909.01.T01:cds;Parent=MsG0780038909.01.T01
Chr7 CDS 55252960 55253041 55252960 ID=MsG0780038909.01.T01:cds;Parent=MsG0780038909.01.T01
Chr7 CDS 55250269 55250340 55250269 ID=MsG0780038909.01.T01:cds;Parent=MsG0780038909.01.T01
Chr7 CDS 55249254 55249306 55249254 ID=MsG0780038909.01.T01:cds;Parent=MsG0780038909.01.T01
Chr7 CDS 55248396 55248485 55248396 ID=MsG0780038909.01.T01:cds;Parent=MsG0780038909.01.T01
Chr7 three_prime_UTR 55248161 55248395 55248161 ID=MsG0780038909.01.T01:three_prime_utr;Parent=MsG0780038909.01.T01
Gene Sequence

>MsG0780038909.01.T01

ATGTCAGGGAGGAAAGAAACAGTTTTGGATTTGGCAAAATTCGTTGACAAAGGTGTTCAAGTTAAGCTCACCGGTGGTAGACAAGTGACAGGAACTTTGAAAGGATATGATCAATTACTTAATCTTGTACTGGACGAAGCTGTTGAGTTTCTGAGAGATCCTGATGATCCGTTGAAAACTACCGATCAGACAAGAAGTCTTGGCCTAATTGTTTGTAGAGGAACTGCTGTGATGCTTGTGTCCCCAACTGATGGTACCGATGAGATTGCAAACCCCTTTCTTCAACCAGATGGGGCGTAA
Protein sequence

>MsG0780038909.01.T01

MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA*