AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023526.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023526.01.T01 MTR_8g095210 87.500 144 2 1 1 144 1 128 1.00e-76 250
MsG0480023526.01.T01 MTR_8g095210 97.802 91 2 0 284 374 522 612 9.44e-54 189
MsG0480023526.01.T01 MTR_8g095210 78.448 116 22 1 119 231 207 322 2.80e-47 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023526.01.T01 AT5G08630 53.472 144 51 1 1 144 1 128 6.26e-37 142
MsG0480023526.01.T01 AT5G08630 37.600 125 73 3 108 231 196 316 4.97e-20 92.4
MsG0480023526.01.T01 AT5G08630 71.429 56 16 0 319 374 583 638 6.31e-20 92.0
MsG0480023526.01.T01 AT5G08630 53.472 144 51 1 1 144 1 128 6.26e-37 142
MsG0480023526.01.T01 AT5G08630 37.600 125 73 3 108 231 196 316 4.97e-20 92.4
MsG0480023526.01.T01 AT5G08630 71.429 56 16 0 319 374 583 638 6.31e-20 92.0
MsG0480023526.01.T01 AT5G08630 53.472 144 51 1 1 144 1 128 6.26e-37 142
MsG0480023526.01.T01 AT5G08630 37.600 125 73 3 108 231 196 316 4.97e-20 92.4
MsG0480023526.01.T01 AT5G08630 71.429 56 16 0 319 374 583 638 6.31e-20 92.0

Find 86 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTGATGGATCCTTTC+TGG 0.107207 4:-86480672 None:intergenic
GCAGGAGTCATGAATTCTTT+TGG 0.251563 4:-86476168 None:intergenic
TTGTGTAGGGAATCTCTTAA+TGG 0.296835 4:+86479607 MsG0480023526.01.T01:CDS
CTGAAAGAACCAGCAGAAAA+TGG 0.315447 4:+86480638 MsG0480023526.01.T01:CDS
CCTAATGGGCTTCTACTAAT+AGG 0.323172 4:-86480824 None:intergenic
AGGGAATCTCTTAATGGTTT+GGG 0.335374 4:+86479613 MsG0480023526.01.T01:CDS
ACACTTGTCGCCGTACTCTT+TGG 0.343868 4:+86479663 MsG0480023526.01.T01:CDS
TAGTCTCGGTCTTTACCTAA+TGG 0.344955 4:-86480839 None:intergenic
ATCTATACCGCCAGAGGGTT+TGG 0.350587 4:+86476058 MsG0480023526.01.T01:CDS
TCTGCTGGTTCTTTCAGCTC+TGG 0.357652 4:-86480632 None:intergenic
TAGGGAATCTCTTAATGGTT+TGG 0.359730 4:+86479612 MsG0480023526.01.T01:CDS
ATAATCGCTAATTTGTGTTA+AGG 0.365021 4:-86476022 None:intergenic
GTTCTTTCAGCTCTGGATCC+AGG 0.367177 4:-86480625 None:intergenic
TCGTAGAAAAGCAGAGGATA+TGG 0.369713 4:+86475991 MsG0480023526.01.T01:intron
AGTCTCGGTCTTTACCTAAT+GGG 0.370559 4:-86480838 None:intergenic
AAGGAGAAAGCCTTTGGCTT+TGG 0.379570 4:+86475713 MsG0480023526.01.T01:CDS
ATATCCCATTGATGATCTAT+TGG 0.390572 4:+86479511 MsG0480023526.01.T01:CDS
CCTATTAGTAGAAGCCCATT+AGG 0.393334 4:+86480824 MsG0480023526.01.T01:CDS
TGCAGGTATGCTCCCTTTGA+AGG 0.403392 4:+86477529 MsG0480023526.01.T01:intron
CTCTTAGTATCCCCACTCCT+TGG 0.407478 4:-86480918 None:intergenic
GGAACATTAAAGTCTCTTGA+TGG 0.407958 4:-86479578 None:intergenic
GAAGGACGATCAGTGAAAAC+AGG 0.410514 4:-86479554 None:intergenic
TTTGTTGGTGCGGAATTGTA+TGG 0.422417 4:+86477593 MsG0480023526.01.T01:CDS
GAACCGCATTCCCATCCTTA+TGG 0.425234 4:-86479708 None:intergenic
TGAAAATGCAATCTGCCATA+AGG 0.432122 4:+86479693 MsG0480023526.01.T01:CDS
TCAGTGAAAACAGGGTCATC+TGG 0.436755 4:-86479545 None:intergenic
CTTCACCAATAGATCATCAA+TGG 0.438495 4:-86479516 None:intergenic
ACTTGGTAAACATGCTCATC+TGG 0.439545 4:-86475759 None:intergenic
TTGCAGGAGCGTTTGTTTGT+TGG 0.471705 4:+86477578 MsG0480023526.01.T01:CDS
TAAACATAAAAGAAAGAAGT+TGG 0.472658 4:+86479042 MsG0480023526.01.T01:CDS
AACAAAATGCAAAACATAGC+AGG 0.479987 4:-86480968 None:intergenic
TCAAAATCTTCCAAAGAGTA+CGG 0.481765 4:-86479673 None:intergenic
CCAGAGGGTTTGGTCATGTA+AGG 0.490194 4:+86476068 MsG0480023526.01.T01:CDS
ATGTTCCAATGCATTGTGTA+GGG 0.490919 4:+86479594 MsG0480023526.01.T01:CDS
GTAAAGACCGAGACTACAAT+AGG 0.494001 4:+86480846 MsG0480023526.01.T01:CDS
TCATCTGGCTTCAAATCCTC+AGG 0.502064 4:-86475744 None:intergenic
TATTGGTGGTTCCGTCGCGA+TGG 0.509839 4:+86480869 MsG0480023526.01.T01:CDS
AAAGGCTTTCTCCTTAAAAG+AGG 0.511177 4:-86475705 None:intergenic
ACCGAGACTACAATAGGTAT+TGG 0.512131 4:+86480852 MsG0480023526.01.T01:CDS
GGCTTTGGCTGAGCCTCCTG+AGG 0.513105 4:+86475728 MsG0480023526.01.T01:CDS
AATGTTCCAATGCATTGTGT+AGG 0.514690 4:+86479593 MsG0480023526.01.T01:CDS
TCTATACTATTCTTCTCTGA+TGG 0.516611 4:-86480683 None:intergenic
ACCAATACCTATTGTAGTCT+CGG 0.518556 4:-86480853 None:intergenic
CATAAAAGAAAGAAGTTGGA+CGG 0.520584 4:+86479046 MsG0480023526.01.T01:CDS
AATGGTTCTGCACAAGAGAA+AGG 0.524537 4:+86479079 MsG0480023526.01.T01:CDS
AAAACAGGGTCATCTGGACT+AGG 0.526194 4:-86479539 None:intergenic
GAATCGGCAAGCTCCTTCAA+AGG 0.526421 4:-86477542 None:intergenic
GGTGGTTCCGTCGCGATGGG+AGG 0.530125 4:+86480873 MsG0480023526.01.T01:CDS
GTTTGGTCATGTAAGGTCAC+TGG 0.533479 4:+86476075 MsG0480023526.01.T01:CDS
ATTGGTGGTTCCGTCGCGAT+GGG 0.534850 4:+86480870 MsG0480023526.01.T01:CDS
TTCACCAATAGATCATCAAT+GGG 0.536238 4:-86479515 None:intergenic
AGAATACTTTGAACGAGAGA+TGG 0.537615 4:+86480793 MsG0480023526.01.T01:CDS
CCTTACATGACCAAACCCTC+TGG 0.539626 4:-86476068 None:intergenic
CGAGTTCTTATCAAAGATGA+CGG 0.542545 4:+86479760 MsG0480023526.01.T01:CDS
TGGAAAAGAATTATCCAGAA+AGG 0.543257 4:+86480658 MsG0480023526.01.T01:CDS
AAGCTGTGACTCCAAGGAGT+GGG 0.547750 4:+86480907 MsG0480023526.01.T01:CDS
TACTGAATGATCTTTAAAGC+AGG 0.550463 4:-86476186 None:intergenic
GAAGAATAGTATAGAGCAGA+GGG 0.559232 4:+86480691 MsG0480023526.01.T01:CDS
AGATTCCCTACACAATGCAT+TGG 0.560023 4:-86479599 None:intergenic
TCATCAATGGGATATTTGAC+TGG 0.564513 4:-86479503 None:intergenic
TGTTGAAAGCTGTGACTCCA+AGG 0.565461 4:+86480901 MsG0480023526.01.T01:CDS
AATCGGCAAGCTCCTTCAAA+GGG 0.566027 4:-86477541 None:intergenic
TTGTTGGTGCGGAATTGTAT+GGG 0.566354 4:+86477594 MsG0480023526.01.T01:CDS
AATGCAATCTGCCATAAGGA+TGG 0.567728 4:+86479697 MsG0480023526.01.T01:CDS
GGAGGCTCAGCCAAAGCCAA+AGG 0.571923 4:-86475723 None:intergenic
ATAAAAGAAAGAAGTTGGAC+GGG 0.577666 4:+86479047 MsG0480023526.01.T01:CDS
TTAAAGTCTCTTGATGGAGA+AGG 0.586141 4:-86479572 None:intergenic
AACTGGCTTGACTTATGAAG+AGG 0.587923 4:+86476101 MsG0480023526.01.T01:CDS
ATGCAATCTGCCATAAGGAT+GGG 0.588555 4:+86479698 MsG0480023526.01.T01:CDS
GGAGCGTTTGTTTGTTGGTG+CGG 0.607787 4:+86477583 MsG0480023526.01.T01:CDS
GAGACTACAATAGGTATTGG+TGG 0.613718 4:+86480855 MsG0480023526.01.T01:CDS
AGAAGAATAGTATAGAGCAG+AGG 0.620057 4:+86480690 MsG0480023526.01.T01:CDS
AAAGCTGTGACTCCAAGGAG+TGG 0.624462 4:+86480906 MsG0480023526.01.T01:CDS
TCCAGAACATGAAGAACACA+AGG 0.629982 4:+86479475 MsG0480023526.01.T01:intron
TTGGACGGGACACTAGTCAA+TGG 0.632342 4:+86479061 MsG0480023526.01.T01:CDS
TTTGAATCTATACCGCCAGA+GGG 0.635243 4:+86476053 MsG0480023526.01.T01:CDS
CTGCCATAAGGATGGGAATG+CGG 0.638650 4:+86479705 MsG0480023526.01.T01:CDS
AGCTGTGACTCCAAGGAGTG+GGG 0.641289 4:+86480908 MsG0480023526.01.T01:CDS
TACATGACCAAACCCTCTGG+CGG 0.644810 4:-86476065 None:intergenic
TCTGGCTTCAAATCCTCAGG+AGG 0.644827 4:-86475741 None:intergenic
CAAATATCCTCCCATCGCGA+CGG 0.651308 4:-86480880 None:intergenic
AGAAAAGCAGAGGATATGGA+TGG 0.653046 4:+86475995 MsG0480023526.01.T01:intron
GTTTGAATCTATACCGCCAG+AGG 0.661345 4:+86476052 MsG0480023526.01.T01:CDS
GGATACTAAGAGCAATGAAG+AGG 0.664314 4:+86480929 MsG0480023526.01.T01:exon
AAGGACGATCAGTGAAAACA+GGG 0.691019 4:-86479553 None:intergenic
GTGCAGCATGAGATTCGACA+AGG 0.695395 4:-86479732 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATACTAACATTAAT+TGG - Chr4:86478705-86478724 None:intergenic 10.0%
!! AATTTATACTAACATTAATT+GGG - Chr4:86478704-86478723 None:intergenic 10.0%
!! ACATTGAATATAATAATAAA+TGG + Chr4:86478908-86478927 MsG0480023526.01.T01:intron 10.0%
!! CATTGAATATAATAATAAAT+GGG + Chr4:86478909-86478928 MsG0480023526.01.T01:intron 10.0%
!! GTTATTATTTGTAAAAAATT+CGG + Chr4:86477324-86477343 MsG0480023526.01.T01:intron 10.0%
!! TAAATAAAAATTTAACACTT+AGG - Chr4:86476715-86476734 None:intergenic 10.0%
!!! TAATTTCTAAAATATTATGT+TGG - Chr4:86479384-86479403 None:intergenic 10.0%
!! AAATGGGATATAATAATTTA+GGG + Chr4:86478925-86478944 MsG0480023526.01.T01:intron 15.0%
!! AATAATCACATTAAACAAAA+TGG + Chr4:86480357-86480376 MsG0480023526.01.T01:intron 15.0%
!! AATTTATCAAAATTAAACAC+TGG - Chr4:86477204-86477223 None:intergenic 15.0%
!! ATAAAAATAGATGACTATAA+AGG - Chr4:86475822-86475841 None:intergenic 15.0%
!! ATTCATTATATTACATGAAT+AGG + Chr4:86477253-86477272 MsG0480023526.01.T01:intron 15.0%
!! GTCAAATAAAAAATAGTAAT+AGG - Chr4:86479974-86479993 None:intergenic 15.0%
!! TAAATGGGATATAATAATTT+AGG + Chr4:86478924-86478943 MsG0480023526.01.T01:intron 15.0%
!!! ATTTTTATTTCAGATAACAA+TGG + Chr4:86480004-86480023 MsG0480023526.01.T01:intron 15.0%
!!! TATCTGAAATAAAAATGAAT+GGG - Chr4:86480000-86480019 None:intergenic 15.0%
!!! TCATTTTTCAATCTATAATT+GGG - Chr4:86478501-86478520 None:intergenic 15.0%
!!! TTATCTGAAATAAAAATGAA+TGG - Chr4:86480001-86480020 None:intergenic 15.0%
!!! TTCATTTTTCAATCTATAAT+TGG - Chr4:86478502-86478521 None:intergenic 15.0%
!! AACAAAATAAAAAAATGACC+AGG - Chr4:86479321-86479340 None:intergenic 20.0%
!! AATAAGTTATACAATCTATC+AGG + Chr4:86476959-86476978 MsG0480023526.01.T01:intron 20.0%
!! ATGGTCAAAAAATAAACTTA+GGG + Chr4:86478347-86478366 MsG0480023526.01.T01:intron 20.0%
!! CAGAAAAAGATATATCAAAA+CGG - Chr4:86477042-86477061 None:intergenic 20.0%
!! CTTAAAAATTGGATTAATGT+GGG + Chr4:86475898-86475917 MsG0480023526.01.T01:intron 20.0%
!! TAAACATAAAAGAAAGAAGT+TGG + Chr4:86479042-86479061 MsG0480023526.01.T01:CDS 20.0%
!! TATCAATATAACTCAGATAA+AGG - Chr4:86477228-86477247 None:intergenic 20.0%
!! TCAATTTATATACAGTCATT+TGG - Chr4:86476778-86476797 None:intergenic 20.0%
!!! AAAAGGTAAGGTTTTATTAA+GGG + Chr4:86480441-86480460 MsG0480023526.01.T01:intron 20.0%
!!! AAATTACAAGTTTTCATCAA+TGG - Chr4:86479424-86479443 None:intergenic 20.0%
!!! CTTCTTTCTTTTATGTTTAT+CGG - Chr4:86479041-86479060 None:intergenic 20.0%
!!! TAAAAGGTAAGGTTTTATTA+AGG + Chr4:86480440-86480459 MsG0480023526.01.T01:intron 20.0%
!!! TAGAGTATTTCTACTAAAAA+GGG - Chr4:86477769-86477788 None:intergenic 20.0%
!!! TTAGAGTATTTCTACTAAAA+AGG - Chr4:86477770-86477789 None:intergenic 20.0%
!!! TTGTGAAATCATCATTTTTT+GGG + Chr4:86478156-86478175 MsG0480023526.01.T01:intron 20.0%
!!! TTTCTATCTCAAATTTTTCA+TGG + Chr4:86478995-86479014 MsG0480023526.01.T01:intron 20.0%
!!! TTTGTGAAATCATCATTTTT+TGG + Chr4:86478155-86478174 MsG0480023526.01.T01:intron 20.0%
!!! TTTTAGTAGAAATACTCTAA+AGG + Chr4:86477770-86477789 MsG0480023526.01.T01:intron 20.0%
!!! TTTTTATTTTGTTCATAACC+TGG + Chr4:86479328-86479347 MsG0480023526.01.T01:intron 20.0%
! AATAGTAAAAGAGATCCTTT+AGG + Chr4:86477350-86477369 MsG0480023526.01.T01:intron 25.0%
! AATATTAAAGTCATCCATGA+AGG + Chr4:86477646-86477665 MsG0480023526.01.T01:intron 25.0%
! ACTTGAATGTGCTTAAAAAT+TGG + Chr4:86475887-86475906 MsG0480023526.01.T01:intron 25.0%
! ATATGTTGCAAATTGAAGAT+TGG - Chr4:86476747-86476766 None:intergenic 25.0%
! ATTAAACAAAATGGACATGT+GGG + Chr4:86480366-86480385 MsG0480023526.01.T01:intron 25.0%
! ATTTATATACAGTCATTTGG+AGG - Chr4:86476775-86476794 None:intergenic 25.0%
! CATGGTCAAAAAATAAACTT+AGG + Chr4:86478346-86478365 MsG0480023526.01.T01:intron 25.0%
! GCTTAAAAATTGGATTAATG+TGG + Chr4:86475897-86475916 MsG0480023526.01.T01:intron 25.0%
! TAATTGTATAATTGAGTAGC+TGG - Chr4:86477442-86477461 None:intergenic 25.0%
! TATGTTGCAAATTGAAGATT+GGG - Chr4:86476746-86476765 None:intergenic 25.0%
! TATTTGATTGCATTAGACAT+CGG + Chr4:86476916-86476935 MsG0480023526.01.T01:intron 25.0%
! TCTCTTGACTATATTAAAGT+TGG + Chr4:86478542-86478561 MsG0480023526.01.T01:intron 25.0%
! TGAAATAAAAATGAATGGGA+TGG - Chr4:86479996-86480015 None:intergenic 25.0%
! TGAATTTCAAGAGTGAAAAA+AGG - Chr4:86480552-86480571 None:intergenic 25.0%
! TGATCAATATTCCTCAATTA+CGG + Chr4:86480062-86480081 MsG0480023526.01.T01:intron 25.0%
! TGATTAGTGATTATTATTGC+AGG + Chr4:86477512-86477531 MsG0480023526.01.T01:intron 25.0%
! TTACTGTTTACTCATGTTTA+TGG + Chr4:86476815-86476834 MsG0480023526.01.T01:intron 25.0%
!! AGAGTATTTCTACTAAAAAG+GGG - Chr4:86477768-86477787 None:intergenic 25.0%
!! ATAATCGCTAATTTGTGTTA+AGG - Chr4:86476025-86476044 None:intergenic 25.0%
!! ATGCATGTCAATTTTTCTTT+TGG + Chr4:86478755-86478774 MsG0480023526.01.T01:intron 25.0%
!! GATGACTTTAATATTTTGCA+TGG - Chr4:86477641-86477660 None:intergenic 25.0%
!! TAATTTAGGGTTTCATTGAT+TGG + Chr4:86478938-86478957 MsG0480023526.01.T01:intron 25.0%
!! TATGAAATTGCATCTTTTGA+TGG + Chr4:86476375-86476394 MsG0480023526.01.T01:intron 25.0%
!! TTGTTAAAGTATTTCGAAAC+AGG + Chr4:86476613-86476632 MsG0480023526.01.T01:intron 25.0%
!! TTTCTTTTGTAAATCGAACT+TGG - Chr4:86475779-86475798 None:intergenic 25.0%
!!! GTTATTTTTTACAGTGTGTT+TGG + Chr4:86477487-86477506 MsG0480023526.01.T01:intron 25.0%
!!! TAAGATTTCTAGTTTAGCAT+TGG - Chr4:86480134-86480153 None:intergenic 25.0%
!!! TTATAATTTGCTCCAAGAAA+AGG + Chr4:86477919-86477938 MsG0480023526.01.T01:intron 25.0%
AAATCATTTAACAGTCCTGT+GGG - Chr4:86476419-86476438 None:intergenic 30.0%
AACAGACAACAATATAAGCA+AGG - Chr4:86480734-86480753 None:intergenic 30.0%
ACTAGAAATCTTATGTGAGT+TGG + Chr4:86480141-86480160 MsG0480023526.01.T01:intron 30.0%
ACTATGAAGGAACCATAAAA+CGG + Chr4:86480086-86480105 MsG0480023526.01.T01:intron 30.0%
AGAAAGAGAAGAGAACAAAA+AGG + Chr4:86480271-86480290 MsG0480023526.01.T01:intron 30.0%
AGGATTACGAATAAGTTAGA+TGG - Chr4:86479830-86479849 None:intergenic 30.0%
ATAAAAGAAAGAAGTTGGAC+GGG + Chr4:86479047-86479066 MsG0480023526.01.T01:CDS 30.0%
CACACTGTAAAAAATAACAC+AGG - Chr4:86477485-86477504 None:intergenic 30.0%
CATAAAAGAAAGAAGTTGGA+CGG + Chr4:86479046-86479065 MsG0480023526.01.T01:CDS 30.0%
CATTAAACAAAATGGACATG+TGG + Chr4:86480365-86480384 MsG0480023526.01.T01:intron 30.0%
CGAGAGTTAAATCAGTAATA+CGG - Chr4:86475864-86475883 None:intergenic 30.0%
GAGACTAAGAGTCTAATAAA+AGG - Chr4:86479850-86479869 None:intergenic 30.0%
GATTGTATAGACTTTATGTG+CGG + Chr4:86476291-86476310 MsG0480023526.01.T01:intron 30.0%
TACATAAACATTGCACTAAG+TGG - Chr4:86475941-86475960 None:intergenic 30.0%
TACCTCATAACGGTATTTAT+CGG - Chr4:86477674-86477693 None:intergenic 30.0%
TCAAAATCTTCCAAAGAGTA+CGG - Chr4:86479676-86479695 None:intergenic 30.0%
TCTATACTATTCTTCTCTGA+TGG - Chr4:86480686-86480705 None:intergenic 30.0%
TGGAAAAGAATTATCCAGAA+AGG + Chr4:86480658-86480677 MsG0480023526.01.T01:CDS 30.0%
TTAAACAAAATGGACATGTG+GGG + Chr4:86480367-86480386 MsG0480023526.01.T01:intron 30.0%
TTCACCAATAGATCATCAAT+GGG - Chr4:86479518-86479537 None:intergenic 30.0%
TTCAGATAACAATGGTTAAC+TGG + Chr4:86480012-86480031 MsG0480023526.01.T01:intron 30.0%
TTGAAATTCAATTTGCAGTG+AGG + Chr4:86480562-86480581 MsG0480023526.01.T01:intron 30.0%
! AATTCTTTTCCATTTTCTGC+TGG - Chr4:86480650-86480669 None:intergenic 30.0%
! ACCTGTTTGATTTCAGAAAA+TGG - Chr4:86476691-86476710 None:intergenic 30.0%
! ATATCCCATTGATGATCTAT+TGG + Chr4:86479511-86479530 MsG0480023526.01.T01:CDS 30.0%
! ATCTCAAATTTTTCATGGTC+AGG + Chr4:86479000-86479019 MsG0480023526.01.T01:intron 30.0%
! GTTTGGGTTCTTATTTAGTT+TGG + Chr4:86476508-86476527 MsG0480023526.01.T01:intron 30.0%
! TACCTCATTATTCCTTTTCT+TGG - Chr4:86477934-86477953 None:intergenic 30.0%
! TCAGAGATTGAAGCAATTTT+TGG + Chr4:86479108-86479127 MsG0480023526.01.T01:intron 30.0%
! TGGGATTTTTGTACTTCTTT+TGG + Chr4:86479632-86479651 MsG0480023526.01.T01:CDS 30.0%
! TGTTTTCTGTACAAATTGCT+TGG - Chr4:86476562-86476581 None:intergenic 30.0%
!! CAATTTTTCAGCAAGAGAAT+CGG - Chr4:86477561-86477580 None:intergenic 30.0%
!! TACTGAATGATCTTTAAAGC+AGG - Chr4:86476189-86476208 None:intergenic 30.0%
!! TCGTTTTTGAATACCATTGT+GGG - Chr4:86476450-86476469 None:intergenic 30.0%
!! TGAATTCTTTTGGAAACTGT+AGG - Chr4:86476161-86476180 None:intergenic 30.0%
!! TGTTCTGGAGAATTTGAAAA+CGG - Chr4:86479464-86479483 None:intergenic 30.0%
!!! AATCATGCCTGTTTTTGAAT+AGG + Chr4:86477389-86477408 MsG0480023526.01.T01:intron 30.0%
!!! ACCATTTTCTGAAATCAAAC+AGG + Chr4:86476687-86476706 MsG0480023526.01.T01:intron 30.0%
!!! CTTTTTATCGACATTGGTTT+GGG + Chr4:86478455-86478474 MsG0480023526.01.T01:intron 30.0%
AAAACAGACTCCAAAAAACC+TGG + Chr4:86480607-86480626 MsG0480023526.01.T01:CDS 35.0%
AAAAGCCATCTCATGAAATC+TGG - Chr4:86479889-86479908 None:intergenic 35.0%
AAAGGCTTTCTCCTTAAAAG+AGG - Chr4:86475708-86475727 None:intergenic 35.0%
AAATAAACTTAGGGTGACGT+AGG + Chr4:86478356-86478375 MsG0480023526.01.T01:intron 35.0%
AACTCCAAACCATGTCAATT+TGG - Chr4:86477307-86477326 None:intergenic 35.0%
AAGACAATTCACTGGGTAAA+AGG + Chr4:86480424-86480443 MsG0480023526.01.T01:intron 35.0%
AAGAGAAGAGAACAAAAAGG+AGG + Chr4:86480274-86480293 MsG0480023526.01.T01:intron 35.0%
AATAAACTTAGGGTGACGTA+GGG + Chr4:86478357-86478376 MsG0480023526.01.T01:intron 35.0%
AATGTTCCAATGCATTGTGT+AGG + Chr4:86479593-86479612 MsG0480023526.01.T01:CDS 35.0%
AATTCACTGGGTAAAAGGTA+AGG + Chr4:86480429-86480448 MsG0480023526.01.T01:intron 35.0%
ACCAATACCTATTGTAGTCT+CGG - Chr4:86480856-86480875 None:intergenic 35.0%
AGAAGAATAGTATAGAGCAG+AGG + Chr4:86480690-86480709 MsG0480023526.01.T01:CDS 35.0%
AGAATACTTTGAACGAGAGA+TGG + Chr4:86480793-86480812 MsG0480023526.01.T01:CDS 35.0%
AGCAACAAGAAAGATTCAAC+TGG - Chr4:86479914-86479933 None:intergenic 35.0%
AGGGAATCTCTTAATGGTTT+GGG + Chr4:86479613-86479632 MsG0480023526.01.T01:CDS 35.0%
AGTTGTTCTATCTAAGCCAT+AGG - Chr4:86479297-86479316 None:intergenic 35.0%
AGTTTGTCATGTAAAACCCA+AGG - Chr4:86477828-86477847 None:intergenic 35.0%
ATAGGTACATGCAAATGATC+TGG + Chr4:86477407-86477426 MsG0480023526.01.T01:intron 35.0%
ATGGAGAGATAGAATCATCT+AGG + Chr4:86480400-86480419 MsG0480023526.01.T01:intron 35.0%
ATGTTCCAATGCATTGTGTA+GGG + Chr4:86479594-86479613 MsG0480023526.01.T01:CDS 35.0%
CAAATCATTTAACAGTCCTG+TGG - Chr4:86476420-86476439 None:intergenic 35.0%
CAACAATATAAGCAAGGAGA+TGG - Chr4:86480728-86480747 None:intergenic 35.0%
CAATGGTATTCAAAAACGAG+AGG + Chr4:86476451-86476470 MsG0480023526.01.T01:intron 35.0%
CATCAATTAAGCAGTCACAA+AGG - Chr4:86479946-86479965 None:intergenic 35.0%
CATGTGGGGAAGAAAATAAA+TGG + Chr4:86480381-86480400 MsG0480023526.01.T01:intron 35.0%
CCTGAAAATTGCAGTTTCAA+GGG - Chr4:86480176-86480195 None:intergenic 35.0%
CGAGTTCTTATCAAAGATGA+CGG + Chr4:86479760-86479779 MsG0480023526.01.T01:CDS 35.0%
CTATGAAGGAACCATAAAAC+GGG + Chr4:86480087-86480106 MsG0480023526.01.T01:intron 35.0%
CTCCAAGAAAAGGAATAATG+AGG + Chr4:86477929-86477948 MsG0480023526.01.T01:intron 35.0%
CTGATCGTGCGTAATTAATT+GGG + Chr4:86478810-86478829 MsG0480023526.01.T01:intron 35.0%
CTTCACCAATAGATCATCAA+TGG - Chr4:86479519-86479538 None:intergenic 35.0%
CTTGTGAAACATACACAAGA+AGG + Chr4:86478668-86478687 MsG0480023526.01.T01:intron 35.0%
GAAGAATAGTATAGAGCAGA+GGG + Chr4:86480691-86480710 MsG0480023526.01.T01:CDS 35.0%
GAATCTTTCTTGTTGCTATC+TGG + Chr4:86479917-86479936 MsG0480023526.01.T01:intron 35.0%
GACGAAGTATGAAATGCAAA+AGG - Chr4:86475973-86475992 None:intergenic 35.0%
GCATGTACCTATTCAAAAAC+AGG - Chr4:86477399-86477418 None:intergenic 35.0%
GGAACATTAAAGTCTCTTGA+TGG - Chr4:86479581-86479600 None:intergenic 35.0%
GTTGTTCTATCTAAGCCATA+GGG - Chr4:86479296-86479315 None:intergenic 35.0%
GTTTGTCATGTAAAACCCAA+GGG - Chr4:86477827-86477846 None:intergenic 35.0%
TAGGGAATCTCTTAATGGTT+TGG + Chr4:86479612-86479631 MsG0480023526.01.T01:CDS 35.0%
TATGAAGGAACCATAAAACG+GGG + Chr4:86480088-86480107 MsG0480023526.01.T01:intron 35.0%
TCATCAATGGGATATTTGAC+TGG - Chr4:86479506-86479525 None:intergenic 35.0%
TGGATGAGTTTATTGAACAG+CGG + Chr4:86480203-86480222 MsG0480023526.01.T01:intron 35.0%
TGTTCGTGATTCACAATCTA+GGG - Chr4:86478083-86478102 None:intergenic 35.0%
TTAAAGTCTCTTGATGGAGA+AGG - Chr4:86479575-86479594 None:intergenic 35.0%
TTACAGAGACCAAATTGACA+TGG + Chr4:86477295-86477314 MsG0480023526.01.T01:intron 35.0%
TTCTCTTGCTGAAAAATTGC+AGG + Chr4:86477562-86477581 MsG0480023526.01.T01:CDS 35.0%
TTGCTGCTATTGGAAATAAG+TGG + Chr4:86478323-86478342 MsG0480023526.01.T01:intron 35.0%
TTGTGTAGGGAATCTCTTAA+TGG + Chr4:86479607-86479626 MsG0480023526.01.T01:CDS 35.0%
TTGTTCGTGATTCACAATCT+AGG - Chr4:86478084-86478103 None:intergenic 35.0%
TTGTTCTATCTAAGCCATAG+GGG - Chr4:86479295-86479314 None:intergenic 35.0%
TTTGTCATGTAAAACCCAAG+GGG - Chr4:86477826-86477845 None:intergenic 35.0%
! ATACTCTAAAGGCTTTCATC+CGG + Chr4:86477781-86477800 MsG0480023526.01.T01:intron 35.0%
! CCTTGAAACTGCAATTTTCA+GGG + Chr4:86480174-86480193 MsG0480023526.01.T01:intron 35.0%
! GGAAAGGTTTTTCTCAAAGA+CGG + Chr4:86477894-86477913 MsG0480023526.01.T01:intron 35.0%
! GTGTTGCAAAAGATTTTACC+AGG - Chr4:86479349-86479368 None:intergenic 35.0%
! TCAAAACATGTTTTCCCCTA+TGG + Chr4:86479278-86479297 MsG0480023526.01.T01:intron 35.0%
! TCTCTTTTGTTGGAATTGTG+TGG + Chr4:86479214-86479233 MsG0480023526.01.T01:intron 35.0%
! TTGGGTTTTACATGACAAAC+TGG + Chr4:86477827-86477846 MsG0480023526.01.T01:intron 35.0%
! TTGTCGTTTACAGTTCCTAA+AGG - Chr4:86477368-86477387 None:intergenic 35.0%
! TTTTCATGGTCAGGAATCAA+TGG + Chr4:86479009-86479028 MsG0480023526.01.T01:intron 35.0%
!! CTCGTTTTTGAATACCATTG+TGG - Chr4:86476451-86476470 None:intergenic 35.0%
!! GCTTTTTATCGACATTGGTT+TGG + Chr4:86478454-86478473 MsG0480023526.01.T01:intron 35.0%
!! GGGTTCTTATTTAGTTTGGA+CGG + Chr4:86476512-86476531 MsG0480023526.01.T01:intron 35.0%
!! GGTTCTTATTTAGTTTGGAC+GGG + Chr4:86476513-86476532 MsG0480023526.01.T01:intron 35.0%
!! TCTTTTAAGGAGAAAGCCTT+TGG + Chr4:86475707-86475726 MsG0480023526.01.T01:CDS 35.0%
!! TGCAATTTTCAGGGAAAAGT+TGG + Chr4:86480183-86480202 MsG0480023526.01.T01:intron 35.0%
!!! GACCAATTTTTTGCTTTCTC+TGG + Chr4:86478254-86478273 MsG0480023526.01.T01:intron 35.0%
!!! GATTTGTTTTGATCCCACAA+TGG + Chr4:86476434-86476453 MsG0480023526.01.T01:intron 35.0%
AACACAGGATGTGCATGATA+AGG - Chr4:86478212-86478231 None:intergenic 40.0%
AAGGACGATCAGTGAAAACA+GGG - Chr4:86479556-86479575 None:intergenic 40.0%
AATACCGTTATGAGGTAGCT+TGG + Chr4:86477677-86477696 MsG0480023526.01.T01:intron 40.0%
AATATGCAGCCATATCCATG+TGG + Chr4:86478183-86478202 MsG0480023526.01.T01:intron 40.0%
AATCTATAATTGGGCCTCCA+TGG - Chr4:86478492-86478511 None:intergenic 40.0%
AATGCCTGTTTCAGAACACA+TGG + Chr4:86476347-86476366 MsG0480023526.01.T01:intron 40.0%
ACAAAAGAGAAAAGCAGCGA+TGG - Chr4:86479204-86479223 None:intergenic 40.0%
ACACATCTGTTTAATCCCAC+AGG + Chr4:86476401-86476420 MsG0480023526.01.T01:intron 40.0%
ACAGAAACGAAGTGTGAAGA+AGG + Chr4:86479801-86479820 MsG0480023526.01.T01:intron 40.0%
ACCGAGACTACAATAGGTAT+TGG + Chr4:86480852-86480871 MsG0480023526.01.T01:CDS 40.0%
ACTTGGTAAACATGCTCATC+TGG - Chr4:86475762-86475781 None:intergenic 40.0%
AGAAAAGCAGAGGATATGGA+TGG + Chr4:86475995-86476014 MsG0480023526.01.T01:intron 40.0%
AGAAGTCCATGCAGAAGATT+TGG + Chr4:86477731-86477750 MsG0480023526.01.T01:intron 40.0%
AGATCTTGCTTAAGATCGAG+AGG - Chr4:86478877-86478896 None:intergenic 40.0%
AGATTCCCTACACAATGCAT+TGG - Chr4:86479602-86479621 None:intergenic 40.0%
AGCAAAAAATTGGTCGTGCA+AGG - Chr4:86478249-86478268 None:intergenic 40.0%
AGCAATGGGAATCATCTCAA+CGG + Chr4:86480315-86480334 MsG0480023526.01.T01:intron 40.0%
AGCCGATAAATACCGTTATG+AGG + Chr4:86477669-86477688 MsG0480023526.01.T01:intron 40.0%
AGTCTCGGTCTTTACCTAAT+GGG - Chr4:86480841-86480860 None:intergenic 40.0%
ATAAACTTAGGGTGACGTAG+GGG + Chr4:86478358-86478377 MsG0480023526.01.T01:intron 40.0%
ATACACAAGAAGGTGAGAGT+AGG + Chr4:86478678-86478697 MsG0480023526.01.T01:intron 40.0%
ATCACACCTTCGAAGAAGAA+AGG + Chr4:86478279-86478298 MsG0480023526.01.T01:intron 40.0%
ATCTAGGCAAGACAATTCAC+TGG + Chr4:86480416-86480435 MsG0480023526.01.T01:intron 40.0%
ATCTTGCTTAAGATCGAGAG+GGG - Chr4:86478875-86478894 None:intergenic 40.0%
ATGGATATGGCTGCATATTC+TGG - Chr4:86478182-86478201 None:intergenic 40.0%
ATGTGCGGTAGTTAATGACA+AGG + Chr4:86476306-86476325 MsG0480023526.01.T01:intron 40.0%
CAATTGTCAGATACCACTGA+AGG + Chr4:86477072-86477091 MsG0480023526.01.T01:intron 40.0%
CAGGAAGCAAAGTGAAAACA+AGG + Chr4:86476632-86476651 MsG0480023526.01.T01:intron 40.0%
CATTTCGATAGGTAGATTCC+CGG - Chr4:86477803-86477822 None:intergenic 40.0%
CCAATTAATTACGCACGATC+AGG - Chr4:86478812-86478831 None:intergenic 40.0%
CCCTGAAAATTGCAGTTTCA+AGG - Chr4:86480177-86480196 None:intergenic 40.0%
CCTATTAGTAGAAGCCCATT+AGG + Chr4:86480824-86480843 MsG0480023526.01.T01:CDS 40.0%
CCTGATCGTGCGTAATTAAT+TGG + Chr4:86478809-86478828 MsG0480023526.01.T01:intron 40.0%
CTGAAAGAACCAGCAGAAAA+TGG + Chr4:86480638-86480657 MsG0480023526.01.T01:CDS 40.0%
GACAAACTGGCACAAAATCA+TGG + Chr4:86477840-86477859 MsG0480023526.01.T01:intron 40.0%
GACGAAGTCTAAAGAGATGA+GGG - Chr4:86478610-86478629 None:intergenic 40.0%
GAGACCAAATTGACATGGTT+TGG + Chr4:86477300-86477319 MsG0480023526.01.T01:intron 40.0%
GATCTTGCTTAAGATCGAGA+GGG - Chr4:86478876-86478895 None:intergenic 40.0%
GATGTCCAGATTTCATGAGA+TGG + Chr4:86479881-86479900 MsG0480023526.01.T01:intron 40.0%
GCGAACAGATATCTTAACAC+AGG - Chr4:86478227-86478246 None:intergenic 40.0%
GCTATTGGAAATAAGTGGCA+TGG + Chr4:86478328-86478347 MsG0480023526.01.T01:intron 40.0%
GGACTACATTGAAGATGAGT+TGG + Chr4:86476836-86476855 MsG0480023526.01.T01:intron 40.0%
GGATACTAAGAGCAATGAAG+AGG + Chr4:86480929-86480948 MsG0480023526.01.T01:exon 40.0%
GGCCAGAGAAAGCAAAAAAT+TGG - Chr4:86478259-86478278 None:intergenic 40.0%
GTAAAGACCGAGACTACAAT+AGG + Chr4:86480846-86480865 MsG0480023526.01.T01:CDS 40.0%
TAATTACGCACGATCAGGAA+GGG - Chr4:86478807-86478826 None:intergenic 40.0%
TAGTCTCGGTCTTTACCTAA+TGG - Chr4:86480842-86480861 None:intergenic 40.0%
TCACACCTTCGAAGAAGAAA+GGG + Chr4:86478280-86478299 MsG0480023526.01.T01:intron 40.0%
TCCAGAACATGAAGAACACA+AGG + Chr4:86479475-86479494 MsG0480023526.01.T01:intron 40.0%
TCCTTGTGTTCTTCATGTTC+TGG - Chr4:86479479-86479498 None:intergenic 40.0%
TCGAGCAGGACAAAAAGAAA+TGG - Chr4:86476269-86476288 None:intergenic 40.0%
TCGTAGAAAAGCAGAGGATA+TGG + Chr4:86475991-86476010 MsG0480023526.01.T01:intron 40.0%
TCTAGGCAAGACAATTCACT+GGG + Chr4:86480417-86480436 MsG0480023526.01.T01:intron 40.0%
TCTTAACTCCTCAGGAACAT+CGG - Chr4:86477874-86477893 None:intergenic 40.0%
TGATTGCATTAGACATCGGT+AGG + Chr4:86476920-86476939 MsG0480023526.01.T01:intron 40.0%
TGGGTAAGATTTCAAGATCC+TGG + Chr4:86478829-86478848 MsG0480023526.01.T01:intron 40.0%
TGTAAGGTCACTGGAAAAAC+TGG + Chr4:86476084-86476103 MsG0480023526.01.T01:CDS 40.0%
TGTATGTTTCACAAGTGCGA+GGG - Chr4:86478663-86478682 None:intergenic 40.0%
TGTGCGGTAGTTAATGACAA+GGG + Chr4:86476307-86476326 MsG0480023526.01.T01:intron 40.0%
TTAATTACGCACGATCAGGA+AGG - Chr4:86478808-86478827 None:intergenic 40.0%
TTGTTGGTGCGGAATTGTAT+GGG + Chr4:86477594-86477613 MsG0480023526.01.T01:CDS 40.0%
TTTGAATCTATACCGCCAGA+GGG + Chr4:86476053-86476072 MsG0480023526.01.T01:CDS 40.0%
TTTGGTCTCTGTAAGTGCTA+CGG - Chr4:86477289-86477308 None:intergenic 40.0%
TTTGTTGGAATTGTGTGGCA+TGG + Chr4:86479219-86479238 MsG0480023526.01.T01:intron 40.0%
TTTGTTGGTGCGGAATTGTA+TGG + Chr4:86477593-86477612 MsG0480023526.01.T01:CDS 40.0%
! AAAGCTGACTCAGAAAGCAA+TGG + Chr4:86480300-86480319 MsG0480023526.01.T01:intron 40.0%
! AAGCTGACTCAGAAAGCAAT+GGG + Chr4:86480301-86480320 MsG0480023526.01.T01:intron 40.0%
! AATGGTTCTGCACAAGAGAA+AGG + Chr4:86479079-86479098 MsG0480023526.01.T01:CDS 40.0%
! CCCTTGAAACTGCAATTTTC+AGG + Chr4:86480173-86480192 MsG0480023526.01.T01:intron 40.0%
! GCAATAATGTCCCCGTTTTA+TGG - Chr4:86480101-86480120 None:intergenic 40.0%
! GCAGGAGTCATGAATTCTTT+TGG - Chr4:86476171-86476190 None:intergenic 40.0%
! TACTCTAAAGGCTTTCATCC+GGG + Chr4:86477782-86477801 MsG0480023526.01.T01:intron 40.0%
! TAGTGCTTGTTCCCTTTTAG+AGG - Chr4:86480242-86480261 None:intergenic 40.0%
! TTTCTTCTTCGAAGGTGTGA+TGG - Chr4:86478280-86478299 None:intergenic 40.0%
!! AACTGGCTTGACTTATGAAG+AGG + Chr4:86476101-86476120 MsG0480023526.01.T01:CDS 40.0%
!! CCTAATGGGCTTCTACTAAT+AGG - Chr4:86480827-86480846 None:intergenic 40.0%
!! GAGACTACAATAGGTATTGG+TGG + Chr4:86480855-86480874 MsG0480023526.01.T01:CDS 40.0%
!! GTTTAGCATTGGCATCTACA+AGG - Chr4:86480123-86480142 None:intergenic 40.0%
!!! GCTCTGCTTTTTATCGACAT+TGG + Chr4:86478449-86478468 MsG0480023526.01.T01:intron 40.0%
!!! TCGCTGCTTTTCTCTTTTGT+TGG + Chr4:86479204-86479223 MsG0480023526.01.T01:intron 40.0%
!!! TTGGAGTCTGTTTTGAAGCA+GGG - Chr4:86480601-86480620 None:intergenic 40.0%
!!! TTTCTTTTGGTTTGCGATCC+TGG + Chr4:86478768-86478787 MsG0480023526.01.T01:intron 40.0%
!!! TTTGGAGTCTGTTTTGAAGC+AGG - Chr4:86480602-86480621 None:intergenic 40.0%
AAAACAGGGTCATCTGGACT+AGG - Chr4:86479542-86479561 None:intergenic 45.0%
AAGAGAAAAGCAGCGATGGT+AGG - Chr4:86479200-86479219 None:intergenic 45.0%
AATCGGCAAGCTCCTTCAAA+GGG - Chr4:86477544-86477563 None:intergenic 45.0%
AATTGTGTGGCATGGAGAAC+TGG + Chr4:86479227-86479246 MsG0480023526.01.T01:intron 45.0%
ACAGGATGTGCATGATAAGG+TGG - Chr4:86478209-86478228 None:intergenic 45.0%
ACCTTTCCTCTTAACTCCTC+AGG - Chr4:86477882-86477901 None:intergenic 45.0%
ACGTAGGGGTTATGGTTGTT+TGG + Chr4:86478372-86478391 MsG0480023526.01.T01:intron 45.0%
ACTTCGTCGTAGAAAAGCAG+AGG + Chr4:86475985-86476004 MsG0480023526.01.T01:intron 45.0%
AGGGAACAAGCACTAGAAGA+AGG + Chr4:86480247-86480266 MsG0480023526.01.T01:intron 45.0%
AGGGGAAGATGAAACAGTCA+AGG + Chr4:86478299-86478318 MsG0480023526.01.T01:intron 45.0%
ATAAGGTGGCCACATGGATA+TGG - Chr4:86478195-86478214 None:intergenic 45.0%
ATGCATACGTGTGTGTGTGT+GGG - Chr4:86478741-86478760 None:intergenic 45.0%
CACACCTTCGAAGAAGAAAG+GGG + Chr4:86478281-86478300 MsG0480023526.01.T01:intron 45.0%
CAGCATTCTGTGAGCAAACT+AGG - Chr4:86477099-86477118 None:intergenic 45.0%
CCTCAATTACGGCACTATGA+AGG + Chr4:86480073-86480092 MsG0480023526.01.T01:intron 45.0%
CCTGTTTCAGAACACATGGA+TGG + Chr4:86476351-86476370 MsG0480023526.01.T01:intron 45.0%
CCTTCATAGTGCCGTAATTG+AGG - Chr4:86480076-86480095 None:intergenic 45.0%
CGAACCAAGCTACCTCATAA+CGG - Chr4:86477684-86477703 None:intergenic 45.0%
CGTAGGGGTTATGGTTGTTT+GGG + Chr4:86478373-86478392 MsG0480023526.01.T01:intron 45.0%
GAAGGACGATCAGTGAAAAC+AGG - Chr4:86479557-86479576 None:intergenic 45.0%
GAGATGAGGGTTACAATCTG+AGG - Chr4:86478597-86478616 None:intergenic 45.0%
GATGTTCCTGAGGAGTTAAG+AGG + Chr4:86477873-86477892 MsG0480023526.01.T01:intron 45.0%
GCTTAGATAGAACAACTGCC+TGG + Chr4:86479300-86479319 MsG0480023526.01.T01:intron 45.0%
GGACGAAGTCTAAAGAGATG+AGG - Chr4:86478611-86478630 None:intergenic 45.0%
GGGGAAGATGAAACAGTCAA+GGG + Chr4:86478300-86478319 MsG0480023526.01.T01:intron 45.0%
GTCTATACAATCACTCGAGC+AGG - Chr4:86476283-86476302 None:intergenic 45.0%
GTGTATGTTTCACAAGTGCG+AGG - Chr4:86478664-86478683 None:intergenic 45.0%
GTTTGAATCTATACCGCCAG+AGG + Chr4:86476052-86476071 MsG0480023526.01.T01:CDS 45.0%
GTTTGGTCATGTAAGGTCAC+TGG + Chr4:86476075-86476094 MsG0480023526.01.T01:CDS 45.0%
TACCTATCGAAATGCCCCTT+GGG + Chr4:86477809-86477828 MsG0480023526.01.T01:intron 45.0%
TCAGTGAAAACAGGGTCATC+TGG - Chr4:86479548-86479567 None:intergenic 45.0%
TCCTGAGGAGTTAAGAGGAA+AGG + Chr4:86477878-86477897 MsG0480023526.01.T01:intron 45.0%
TCTGCACCAAATCTTCTGCA+TGG - Chr4:86477740-86477759 None:intergenic 45.0%
TCTTCCCCTTTCTTCTTCGA+AGG - Chr4:86478288-86478307 None:intergenic 45.0%
TGAGTTTATTGAACAGCGGC+AGG + Chr4:86480207-86480226 MsG0480023526.01.T01:intron 45.0%
TGTTGAAAGCTGTGACTCCA+AGG + Chr4:86480901-86480920 MsG0480023526.01.T01:CDS 45.0%
! AAGGAGAAAGCCTTTGGCTT+TGG + Chr4:86475713-86475732 MsG0480023526.01.T01:CDS 45.0%
! CTTCTCTGATGGATCCTTTC+TGG - Chr4:86480675-86480694 None:intergenic 45.0%
! TCATCTGGCTTCAAATCCTC+AGG - Chr4:86475747-86475766 None:intergenic 45.0%
!! CCATCCATGTGTTCTGAAAC+AGG - Chr4:86476354-86476373 None:intergenic 45.0%
!! GGTATTTATCGGCTCCTTCA+TGG - Chr4:86477663-86477682 None:intergenic 45.0%
!! TTGCAGGAGCGTTTGTTTGT+TGG + Chr4:86477578-86477597 MsG0480023526.01.T01:CDS 45.0%
!!! AGCTCTGGATCCAGGTTTTT+TGG - Chr4:86480620-86480639 None:intergenic 45.0%
AAAGCTGTGACTCCAAGGAG+TGG + Chr4:86480906-86480925 MsG0480023526.01.T01:CDS 50.0%
AAGCTGTGACTCCAAGGAGT+GGG + Chr4:86480907-86480926 MsG0480023526.01.T01:CDS 50.0%
AAGGGTGGCAAGATCAAACC+AGG - Chr4:86478789-86478808 None:intergenic 50.0%
ACACTTGTCGCCGTACTCTT+TGG + Chr4:86479663-86479682 MsG0480023526.01.T01:CDS 50.0%
AGACTTGTGTGCTGCACTGA+TGG + Chr4:86476486-86476505 MsG0480023526.01.T01:intron 50.0%
AGGAACTTGGGGCCTCTAAA+AGG + Chr4:86480227-86480246 MsG0480023526.01.T01:intron 50.0%
ATACGTGTGTGTGTGTGGGT+GGG - Chr4:86478737-86478756 None:intergenic 50.0%
ATCTATACCGCCAGAGGGTT+TGG + Chr4:86476058-86476077 MsG0480023526.01.T01:CDS 50.0%
ATGACCCTCTCTCACGTAAC+CGG - Chr4:86478399-86478418 None:intergenic 50.0%
ATTGAACAGCGGCAGGAACT+TGG + Chr4:86480214-86480233 MsG0480023526.01.T01:intron 50.0%
CAAATATCCTCCCATCGCGA+CGG - Chr4:86480883-86480902 None:intergenic 50.0%
CAGTCAAGGGTTGCTGCTAT+TGG + Chr4:86478313-86478332 MsG0480023526.01.T01:intron 50.0%
CATCGGTAGGTTTGTGAAGC+TGG + Chr4:86476933-86476952 MsG0480023526.01.T01:intron 50.0%
CATGCATACGTGTGTGTGTG+TGG - Chr4:86478742-86478761 None:intergenic 50.0%
CCTTACATGACCAAACCCTC+TGG - Chr4:86476071-86476090 None:intergenic 50.0%
CTACCTATCGAAATGCCCCT+TGG + Chr4:86477808-86477827 MsG0480023526.01.T01:intron 50.0%
CTCTTAGTATCCCCACTCCT+TGG - Chr4:86480921-86480940 None:intergenic 50.0%
CTGCCATAAGGATGGGAATG+CGG + Chr4:86479705-86479724 MsG0480023526.01.T01:CDS 50.0%
GAACCGCATTCCCATCCTTA+TGG - Chr4:86479711-86479730 None:intergenic 50.0%
GAATCGGCAAGCTCCTTCAA+AGG - Chr4:86477545-86477564 None:intergenic 50.0%
GAGCAAACTAGGACCTTCAG+TGG - Chr4:86477088-86477107 None:intergenic 50.0%
GGTTACAATCTGAGGAGCGA+AGG - Chr4:86478589-86478608 None:intergenic 50.0%
GTGCAGCATGAGATTCGACA+AGG - Chr4:86479735-86479754 None:intergenic 50.0%
TAACTCCTCAGGAACATCGG+TGG - Chr4:86477871-86477890 None:intergenic 50.0%
TACATGACCAAACCCTCTGG+CGG - Chr4:86476068-86476087 None:intergenic 50.0%
TATCTCCACCGATGTTCCTG+AGG + Chr4:86477863-86477882 MsG0480023526.01.T01:intron 50.0%
TGCAGGTATGCTCCCTTTGA+AGG + Chr4:86477529-86477548 MsG0480023526.01.T01:intron 50.0%
TGCATGATAAGGTGGCCACA+TGG - Chr4:86478201-86478220 None:intergenic 50.0%
TGCTTAAGATCGAGAGGGGA+GGG - Chr4:86478871-86478890 None:intergenic 50.0%
TTAGGGTGACGTAGGGGTTA+TGG + Chr4:86478364-86478383 MsG0480023526.01.T01:intron 50.0%
TTGAACAGCGGCAGGAACTT+GGG + Chr4:86480215-86480234 MsG0480023526.01.T01:intron 50.0%
TTGCTTAAGATCGAGAGGGG+AGG - Chr4:86478872-86478891 None:intergenic 50.0%
TTGGACGGGACACTAGTCAA+TGG + Chr4:86479061-86479080 MsG0480023526.01.T01:CDS 50.0%
TTTCACAAGTGCGAGGGAGA+AGG - Chr4:86478657-86478676 None:intergenic 50.0%
! CCAGAGGGTTTGGTCATGTA+AGG + Chr4:86476068-86476087 MsG0480023526.01.T01:CDS 50.0%
! GATTCACAATCTAGGGTGCG+AGG - Chr4:86478076-86478095 None:intergenic 50.0%
! GGAACTTGGGGCCTCTAAAA+GGG + Chr4:86480228-86480247 MsG0480023526.01.T01:intron 50.0%
! GGAGCGTTTGTTTGTTGGTG+CGG + Chr4:86477583-86477602 MsG0480023526.01.T01:CDS 50.0%
! GTGTGCTGCACTGATGGTTT+GGG + Chr4:86476492-86476511 MsG0480023526.01.T01:intron 50.0%
! TCTGGCTTCAAATCCTCAGG+AGG - Chr4:86475744-86475763 None:intergenic 50.0%
! TGTGTGCTGCACTGATGGTT+TGG + Chr4:86476491-86476510 MsG0480023526.01.T01:intron 50.0%
!! AACCCAAGGGGCATTTCGAT+AGG - Chr4:86477814-86477833 None:intergenic 50.0%
!! GTTCTTTCAGCTCTGGATCC+AGG - Chr4:86480628-86480647 None:intergenic 50.0%
!! TCTGCTGGTTCTTTCAGCTC+TGG - Chr4:86480635-86480654 None:intergenic 50.0%
AGCTGTGACTCCAAGGAGTG+GGG + Chr4:86480908-86480927 MsG0480023526.01.T01:CDS 55.0%
AGGACGGAAGGACAGTCTGA+GGG - Chr4:86478632-86478651 None:intergenic 55.0%
CATACGTGTGTGTGTGTGGG+TGG - Chr4:86478738-86478757 None:intergenic 55.0%
CTTAAGATCGAGAGGGGAGG+GGG - Chr4:86478869-86478888 None:intergenic 55.0%
GCTTAAGATCGAGAGGGGAG+GGG - Chr4:86478870-86478889 None:intergenic 55.0%
GGGGTAGCAAGATTGCAACC+AGG - Chr4:86478850-86478869 None:intergenic 55.0%
GGGGTTATGGTTGTTTGGGC+CGG + Chr4:86478377-86478396 MsG0480023526.01.T01:intron 55.0%
TGAACAGCGGCAGGAACTTG+GGG + Chr4:86480216-86480235 MsG0480023526.01.T01:intron 55.0%
TTACGCACGATCAGGAAGGG+TGG - Chr4:86478804-86478823 None:intergenic 55.0%
TTTGGGCCGAGTTCTCTCCA+TGG + Chr4:86478472-86478491 MsG0480023526.01.T01:intron 55.0%
! ATTGGTGGTTCCGTCGCGAT+GGG + Chr4:86480870-86480889 MsG0480023526.01.T01:CDS 55.0%
! TATTGGTGGTTCCGTCGCGA+TGG + Chr4:86480869-86480888 MsG0480023526.01.T01:CDS 55.0%
AGCGAAGGCAAGAGAGGCGA+GGG - Chr4:86478574-86478593 None:intergenic 60.0%
AGGGAGAAGGACAGGACGGA+AGG - Chr4:86478644-86478663 None:intergenic 60.0%
CAAGTGCGAGGGAGAAGGAC+AGG - Chr4:86478652-86478671 None:intergenic 60.0%
CAGGACGGAAGGACAGTCTG+AGG - Chr4:86478633-86478652 None:intergenic 60.0%
CTGAGGAGCGAAGGCAAGAG+AGG - Chr4:86478580-86478599 None:intergenic 60.0%
GGAGGCTCAGCCAAAGCCAA+AGG - Chr4:86475726-86475745 None:intergenic 60.0%
GGGCCTCCATGGAGAGAACT+CGG - Chr4:86478481-86478500 None:intergenic 60.0%
GTGTGTGTGTGTGGGTGGGT+GGG - Chr4:86478733-86478752 None:intergenic 60.0%
TGCGAGGGAGAAGGACAGGA+CGG - Chr4:86478648-86478667 None:intergenic 60.0%
TGGGCCGGTTACGTGAGAGA+GGG + Chr4:86478392-86478411 MsG0480023526.01.T01:intron 60.0%
TTGGGCCGGTTACGTGAGAG+AGG + Chr4:86478391-86478410 MsG0480023526.01.T01:intron 60.0%
CGTGTGTGTGTGTGGGTGGG+TGG - Chr4:86478734-86478753 None:intergenic 65.0%
GAGCGAAGGCAAGAGAGGCG+AGG - Chr4:86478575-86478594 None:intergenic 65.0%
GGGCCGAGTTCTCTCCATGG+AGG + Chr4:86478475-86478494 MsG0480023526.01.T01:intron 65.0%
! GGCTTTGGCTGAGCCTCCTG+AGG + Chr4:86475728-86475747 MsG0480023526.01.T01:CDS 65.0%
GGTGGTTCCGTCGCGATGGG+AGG + Chr4:86480873-86480892 MsG0480023526.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 86475702 86480983 86475702 ID=MsG0480023526.01;Name=MsG0480023526.01
Chr4 mRNA 86475702 86480983 86475702 ID=MsG0480023526.01.T01;Parent=MsG0480023526.01;Name=MsG0480023526.01.T01;_AED=0.46;_eAED=0.48;_QI=0|0.5|0.42|1|0.83|0.71|7|46|374
Chr4 exon 86475702 86475826 86475702 ID=MsG0480023526.01.T01:exon:3031;Parent=MsG0480023526.01.T01
Chr4 exon 86476002 86476210 86476002 ID=MsG0480023526.01.T01:exon:3032;Parent=MsG0480023526.01.T01
Chr4 exon 86477534 86477631 86477534 ID=MsG0480023526.01.T01:exon:3033;Parent=MsG0480023526.01.T01
Chr4 exon 86479022 86479100 86479022 ID=MsG0480023526.01.T01:exon:3034;Parent=MsG0480023526.01.T01
Chr4 exon 86479480 86479813 86479480 ID=MsG0480023526.01.T01:exon:3035;Parent=MsG0480023526.01.T01
Chr4 exon 86480580 86480712 86480580 ID=MsG0480023526.01.T01:exon:3036;Parent=MsG0480023526.01.T01
Chr4 exon 86480791 86480983 86480791 ID=MsG0480023526.01.T01:exon:3037;Parent=MsG0480023526.01.T01
Chr4 CDS 86475702 86475826 86475702 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86476002 86476210 86476002 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86477534 86477631 86477534 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86479022 86479100 86479022 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86479480 86479813 86479480 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86480580 86480712 86480580 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 CDS 86480791 86480937 86480791 ID=MsG0480023526.01.T01:cds;Parent=MsG0480023526.01.T01
Chr4 three_prime_UTR 86480938 86480983 86480938 ID=MsG0480023526.01.T01:three_prime_utr;Parent=MsG0480023526.01.T01
Gene Sequence

>MsG0480023526.01.T01

ATGCCTCTTTTAAGGAGAAAGCCTTTGGCTTTGGCTGAGCCTCCTGAGGATTTGAAGCCAGATGAGCATGTTTACCAAGTTCGATTTACAAAAGAAATTTTTCGAGATTATCAGTATCCTTTATACAGAGGATATGGATGGTCAACCTTAACACAAATTAGCGATTATTTGCAACGTTTGAATCTATACCGCCAGAGGGTTTGGTCATGTAAGGTCACTGGAAAAACTGGCTTGACTTATGAAGAGGCTATTGTGTCAGAACAACGAGCGACTGAGAAGTTCCTACAGTTTCCAAAAGAATTCATGACTCCTGCTTTAAAGATCATTCAGTACAGTATGCTCCCTTTGAAGGAGCTTGCCGATTCTCTTGCTGAAAAATTGCAGGAGCGTTTGTTTGTTGGTGCGGAATTGTATGGGAAAAAAGATGATGATGAATCAATGGAAGAAGCCGATAAACATAAAAGAAAGAAGTTGGACGGGACACTAGTCAATGGTTCTGCACAAGAGAAAGAACATGAAGAACACAAGGAAATACCAGTCAAATATCCCATTGATGATCTATTGGTGAAGCCTAGTCCAGATGACCCTGTTTTCACTGATCGTCCTTCTCCATCAAGAGACTTTAATGTTCCAATGCATTGTGTAGGGAATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAACAGTACACTTGTCGCCGTACTCTTTGGAAGATTTTGAAAATGCAATCTGCCATAAGGATGGGAATGCGGTTCTCCTTGTCGAATCTCATGCTGCACTTTTTCGAGTTCTTATCAAAGATGACGGTGAATACACTTCAGCTGTACAGAAACGAAGTTGAGGTTAAGCGTTCAAGCCCTGCTTCAAAACAGACTCCAAAAAACCTGGATCCAGAGCTGAAAGAACCAGCAGAAAATGGAAAAGAATTATCCAGAAAGGATCCATCAGAGAAGAATAGTATAGAGCAGAGGAGAGAATACTTTGAACGAGAGATGGAGAAACGACCTATTAGTAGAAGCCCATTAGGTAAAGACCGAGACTACAATAGGTATTGGTGGTTCCGTCGCGATGGGAGGATATTTGTTGAAAGCTGTGACTCCAAGGAGTGGGGATACTAA
Protein sequence

>MsG0480023526.01.T01

MPLLRRKPLALAEPPEDLKPDEHVYQVRFTKEIFRDYQYPLYRGYGWSTLTQISDYLQRLNLYRQRVWSCKVTGKTGLTYEEAIVSEQRATEKFLQFPKEFMTPALKIIQYSMLPLKELADSLAEKLQERLFVGAELYGKKDDDESMEEADKHKRKKLDGTLVNGSAQEKEHEEHKEIPVKYPIDDLLVKPSPDDPVFTDRPSPSRDFNVPMHCVGNLLMVWDFCTSFGKQYTCRRTLWKILKMQSAIRMGMRFSLSNLMLHFFEFLSKMTVNTLQLYRNEVEVKRSSPASKQTPKNLDPELKEPAENGKELSRKDPSEKNSIEQRREYFEREMEKRPISRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGY*