AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023608.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023608.01.T01 MTR_8g096930 80.786 687 70 2 167 791 639 1325 0.0 1056
MsG0480023608.01.T01 MTR_8g096930 94.413 179 10 0 1 179 395 573 1.23e-103 348
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 185 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGGCTCTTTCTTCTTAC+TGG 0.130822 4:+87599079 None:intergenic
CTCCCATACAACTCATTATT+TGG 0.149244 4:+87597967 None:intergenic
TTCTTCTTACTGGATTTGTT+TGG 0.211320 4:+87599089 None:intergenic
TTTGGGTTGGTATGAAATTC+TGG 0.220335 4:+87599107 None:intergenic
TTTGCATTTAAGACTCTTAC+AGG 0.232400 4:-87596763 MsG0480023608.01.T01:CDS
GTATCAGCGTTGCCAGATTT+TGG 0.244275 4:-87596661 MsG0480023608.01.T01:CDS
TTTGACCTCTTTCTTTCTCT+TGG 0.263749 4:+87598446 None:intergenic
GACTCTCACTGGTGCTTTGC+CGG 0.281449 4:-87598043 MsG0480023608.01.T01:CDS
GATTTCTCATCATCCACTTC+AGG 0.296303 4:+87598813 None:intergenic
TCTGCAGCAGGTATGATTCT+AGG 0.302879 4:+87598852 None:intergenic
TCTTCTTACTGGATTTGTTT+GGG 0.306969 4:+87599090 None:intergenic
TTTGAAAATTATTATTGAAC+TGG 0.307637 4:+87596491 None:intergenic
CAGGTTGCTAAGGGTGAATT+TGG 0.310805 4:-87596895 MsG0480023608.01.T01:CDS
CAGGTTGCTGAGGGTGAATT+TGG 0.343581 4:-87597217 MsG0480023608.01.T01:CDS
CTCATTGATGACTGCTGCCC+TGG 0.347569 4:+87596577 None:intergenic
CTGTTCCTTGTGAACGGTTT+GGG 0.350040 4:+87598176 None:intergenic
CGGTTGTCAAAGCGACTTGC+TGG 0.356357 4:-87598414 MsG0480023608.01.T01:CDS
AACATGATGAGGAATTTGTT+TGG 0.357366 4:-87597661 MsG0480023608.01.T01:CDS
GATTCTCCATTGGTGAATTT+AGG 0.366382 4:+87597799 None:intergenic
CCTTTGCATTCCACTACTCT+TGG 0.366457 4:-87598776 MsG0480023608.01.T01:CDS
CAACTCCAGGACAACCTTGC+AGG 0.375899 4:+87596533 None:intergenic
TAGTCCTCAACACAGGTTCC+AGG 0.387395 4:+87597104 None:intergenic
TCCACTTGTTTGTCTGCAGC+AGG 0.389170 4:+87598840 None:intergenic
CTGAGCCTGCAAGGTTGTCC+TGG 0.394522 4:-87596538 MsG0480023608.01.T01:CDS
AGCATAATGAGAAATTTGTT+TGG 0.395674 4:-87597343 MsG0480023608.01.T01:CDS
GGAGCATCTAACCATCTCTA+TGG 0.399627 4:-87598294 MsG0480023608.01.T01:CDS
CTTACTGGATTTGTTTGGGT+TGG 0.400869 4:+87599094 None:intergenic
GAGGAAAATTTAGCAGTTCA+AGG 0.403757 4:-87596727 MsG0480023608.01.T01:CDS
AGAGCCCGGCATTCCTTGTC+GGG 0.413690 4:-87599066 MsG0480023608.01.T01:CDS
TGGTCTGTAAGCTTGGTAAC+TGG 0.423826 4:+87598918 None:intergenic
CCTCCATCATGACAGTTAAC+AGG 0.423982 4:+87596691 None:intergenic
CATGACAGTTAACAGGTTCC+TGG 0.424130 4:+87596698 None:intergenic
GCTGTTCCTTGTGAACGGTT+TGG 0.426968 4:+87598175 None:intergenic
AGGCAACAACATAAGGAATC+TGG 0.427206 4:-87597440 MsG0480023608.01.T01:CDS
TTCTAGAATGATGCAGAAGT+TGG 0.427230 4:+87597605 None:intergenic
AAACTGGAAGATCCAAAATC+TGG 0.430033 4:+87596649 None:intergenic
AAGCAACATGATAAGGAATC+TGG 0.432570 4:-87597764 MsG0480023608.01.T01:CDS
TCAGAGCTCACCTTACCATT+TGG 0.436408 4:-87598105 MsG0480023608.01.T01:CDS
CAGTCTTCAAAGATACTGCT+TGG 0.444071 4:-87597865 MsG0480023608.01.T01:CDS
TTCTAGAACGATGCAGAAGT+TGG 0.445545 4:+87597287 None:intergenic
CGATTGCTGTTCCTTGTGAA+CGG 0.447931 4:+87598170 None:intergenic
CTGCCAAATAATGAGTTGTA+TGG 0.450710 4:-87597970 MsG0480023608.01.T01:CDS
GTCGCGAAAGCAACATGATA+AGG 0.452779 4:-87597771 MsG0480023608.01.T01:CDS
GGTACATCGGAGCAGCCTCC+AGG 0.452859 4:-87597196 MsG0480023608.01.T01:CDS
TTGCTTGTGTCCATTGCGTT+TGG 0.456520 4:+87599200 None:intergenic
TTGATTGCATAATCCAAGCT+TGG 0.463182 4:+87598747 None:intergenic
AGAAAATGACCAGGTTGCTA+AGG 0.468508 4:-87596905 MsG0480023608.01.T01:CDS
TTTAACGTTACAGTTTGAAA+TGG 0.469195 4:+87596853 None:intergenic
CTCTTGGTCTGACCCAAGCT+TGG 0.470998 4:-87598760 MsG0480023608.01.T01:CDS
TGATGACTGCTGCCCTGGCA+TGG 0.471120 4:+87596582 None:intergenic
TGATTGCATAATCCAAGCTT+GGG 0.471659 4:+87598748 None:intergenic
GTCATGAAGGCAACAACATA+AGG 0.474479 4:-87597447 MsG0480023608.01.T01:CDS
GCGACTTGCTGGCATTGAAC+CGG 0.474851 4:-87598403 MsG0480023608.01.T01:CDS
CCTTACCATTTGGTGAATCC+TGG 0.476635 4:-87598095 MsG0480023608.01.T01:CDS
TTTCCCGACTCTCTATGTAA+TGG 0.484000 4:+87598891 None:intergenic
ACAGGAGGGAAGTCCATGCC+AGG 0.484013 4:-87596595 MsG0480023608.01.T01:CDS
AACTGCCGAGGAATTAAAAC+CGG 0.484747 4:-87596120 MsG0480023608.01.T01:CDS
TTGAGGACTAGCTCCACATC+TGG 0.485220 4:-87597409 MsG0480023608.01.T01:CDS
CGTTCACAAGGAACAGCAAT+CGG 0.486299 4:-87598169 MsG0480023608.01.T01:CDS
TTATCAGAAGGGCTTGCCTC+CGG 0.488208 4:+87598384 None:intergenic
TGGTACATTGGATCAACCAC+CGG 0.497117 4:-87597515 MsG0480023608.01.T01:CDS
CGGGCTTCAAAACGACTGGC+TGG 0.498052 4:-87599047 MsG0480023608.01.T01:CDS
AAGAAAGAGCGTAATATGAA+TGG 0.498524 4:-87597889 MsG0480023608.01.T01:CDS
GGATATGGAGTTCATCAGCC+TGG 0.500596 4:+87599016 None:intergenic
AAAATCCAAGAGAAAGAAAG+AGG 0.501184 4:-87598451 MsG0480023608.01.T01:CDS
TTCTCATTTCACTTTGACAC+AGG 0.502289 4:-87596613 MsG0480023608.01.T01:CDS
AAGAGCCCGGCATTCCTTGT+CGG 0.506505 4:-87599067 MsG0480023608.01.T01:CDS
TAAATCATCTCAGCATTTCA+AGG 0.509593 4:-87599243 MsG0480023608.01.T01:CDS
TCTAGAATGATGCAGAAGTT+GGG 0.511069 4:+87597606 None:intergenic
TCTAGAACGATGCAGAAGTT+GGG 0.512660 4:+87597288 None:intergenic
TTGTCGGGCTTCAAAACGAC+TGG 0.513780 4:-87599051 MsG0480023608.01.T01:CDS
AACTCAGCAGAAGAATCAAC+CGG 0.514125 4:+87598024 None:intergenic
TTTGCATTCAAGACTCTCAC+TGG 0.514930 4:-87598054 MsG0480023608.01.T01:CDS
TTGAAAATTATTATTGAACT+GGG 0.516712 4:+87596492 None:intergenic
TGTTGTTGCGGATCAACTCC+AGG 0.516937 4:+87596520 None:intergenic
TCCTCGGCAGTAACTGCAGC+CGG 0.517259 4:+87596101 None:intergenic
GGAAAATTTAGCAGTTCAAG+GGG 0.517942 4:-87596725 MsG0480023608.01.T01:CDS
TTCCCATCTCTGAGCCTGCA+AGG 0.518273 4:-87596547 MsG0480023608.01.T01:CDS
CATCTAACCATCTCTATGGT+GGG 0.520294 4:-87598290 MsG0480023608.01.T01:CDS
GAAGCCCGACAAGGAATGCC+GGG 0.521380 4:+87599062 None:intergenic
TTAAATGCAAATTCTAAGCA+TGG 0.525992 4:+87596775 None:intergenic
TGAAGCCCGACAAGGAATGC+CGG 0.527174 4:+87599061 None:intergenic
AGGCAACAACATGAGGAACC+TGG 0.528981 4:-87597122 MsG0480023608.01.T01:CDS
TCTGACCAGGATTCACCAAA+TGG 0.530338 4:+87598090 None:intergenic
CAACCTTGCAGGCTCAGAGA+TGG 0.530486 4:+87596544 None:intergenic
GCACCATTACATAGAGAGTC+GGG 0.531421 4:-87598894 MsG0480023608.01.T01:CDS
GGAGAATCTCTTAGTCATGA+AGG 0.533330 4:-87597142 MsG0480023608.01.T01:CDS
CAAATTCACCCTTAGCAACC+TGG 0.533831 4:+87596896 None:intergenic
AGTCTTCAAAGATACTGCTT+GGG 0.534640 4:-87597864 MsG0480023608.01.T01:CDS
CTAAACATATTAGTAATGAT+AGG 0.535909 4:-87598134 MsG0480023608.01.T01:CDS
TACAAGATTCTCTGTTGCCA+TGG 0.536293 4:+87597470 None:intergenic
AACCTTGCAGGCTCAGAGAT+GGG 0.537883 4:+87596545 None:intergenic
TACTCAAGAGCTTTATCAGA+AGG 0.538192 4:+87598372 None:intergenic
TGCCAAATAATGAGTTGTAT+GGG 0.541119 4:-87597969 MsG0480023608.01.T01:CDS
AGGAAAATTTAGCAGTTCAA+GGG 0.541169 4:-87596726 MsG0480023608.01.T01:CDS
AGAGAATCTTGTAGTCATGA+AGG 0.541432 4:-87597460 MsG0480023608.01.T01:CDS
TCCAGTAAGAAGAAAGAGCC+CGG 0.547845 4:-87599080 MsG0480023608.01.T01:CDS
GACTGGCTGGATCTGAACCC+AGG 0.548529 4:-87599034 MsG0480023608.01.T01:CDS
AGACACATGACGAGTAAGCT+TGG 0.552905 4:+87598260 None:intergenic
GAACCTGTTAACTGTCATGA+TGG 0.554557 4:-87596694 MsG0480023608.01.T01:CDS
AACTGGGAATATTGTTGTTG+CGG 0.554594 4:+87596508 None:intergenic
GAAAATGACCAGGTTGCTAA+GGG 0.555786 4:-87596904 MsG0480023608.01.T01:CDS
TTGAATGCAAATTCCAAGCA+TGG 0.555831 4:+87598066 None:intergenic
CTGTTAACTGTCATGATGGA+GGG 0.557709 4:-87596690 MsG0480023608.01.T01:CDS
GAAACTAAAACGTTAAACAA+TGG 0.559589 4:-87597169 MsG0480023608.01.T01:CDS
TAAATGCAAATTCTAAGCAT+GGG 0.560755 4:+87596776 None:intergenic
TTCTCTCTTTCTAGTTGACG+TGG 0.561803 4:+87599146 None:intergenic
AAATGACCAGGTTGCTGAGG+GGG 0.562559 4:-87597542 MsG0480023608.01.T01:CDS
AACGTTACAGTTTGAAATGG+CGG 0.562874 4:+87596856 None:intergenic
CCAGGATTCACCAAATGGTA+AGG 0.563925 4:+87598095 None:intergenic
AGCTGAATTGCAACTAAGTG+AGG 0.565303 4:-87598946 MsG0480023608.01.T01:CDS
AAAGTTTCGACTCCTAGTGT+TGG 0.568857 4:-87597997 MsG0480023608.01.T01:CDS
TCATTTCACTTTGACACAGG+AGG 0.569150 4:-87596610 MsG0480023608.01.T01:CDS
TTAACTACCGAGGATTTCCT+CGG 0.572673 4:+87596085 None:intergenic
AGTCGCTTTGACAACCGCAT+AGG 0.573354 4:+87598420 None:intergenic
TTTCTTCCCCACCATAGAGA+TGG 0.573652 4:+87598283 None:intergenic
GTCGCTTTGACAACCGCATA+GGG 0.575031 4:+87598421 None:intergenic
AACTGTCATGATGGAGGGGA+TGG 0.576525 4:-87596685 MsG0480023608.01.T01:CDS
GCATCTAACCATCTCTATGG+TGG 0.578703 4:-87598291 MsG0480023608.01.T01:CDS
GGTACATTGGATCAACCACC+GGG 0.579078 4:-87597514 MsG0480023608.01.T01:CDS
TTTGGCAGTTCACCAACACT+AGG 0.579154 4:+87597985 None:intergenic
TTGAGGTCTAGCTCCACACC+TGG 0.579298 4:-87597733 MsG0480023608.01.T01:CDS
GAATTGCAACTAAGTGAGGG+TGG 0.580593 4:-87598942 MsG0480023608.01.T01:CDS
ATCCTGGTCAGATCCATGCT+TGG 0.581250 4:-87598079 MsG0480023608.01.T01:CDS
CATTTCACTTTGACACAGGA+GGG 0.582652 4:-87596609 MsG0480023608.01.T01:CDS
TACGCTTTAGTTTCAAAACC+CGG 0.583891 4:+87597496 None:intergenic
TGCACCATTACATAGAGAGT+CGG 0.584390 4:-87598895 MsG0480023608.01.T01:CDS
GTTAAAAGTACAGTTGCAGT+GGG 0.584422 4:+87598321 None:intergenic
TATGCAATCAATACCCTCAC+GGG 0.584830 4:-87598735 MsG0480023608.01.T01:intron
TGCTTGGGCAACCTGAGTTG+AGG 0.584991 4:-87597849 MsG0480023608.01.T01:CDS
TGGTGCATGGTCTGTAAGCT+TGG 0.585017 4:+87598911 None:intergenic
TACAGGTGTGATTCCAGTAG+AGG 0.585100 4:-87596746 MsG0480023608.01.T01:CDS
ACCTGCTGCAGACAAACAAG+TGG 0.588791 4:-87598841 MsG0480023608.01.T01:CDS
ACTCTCTATGTAATGGTGCA+TGG 0.590005 4:+87598898 None:intergenic
ACTCAAGAGCTTTATCAGAA+GGG 0.590425 4:+87598373 None:intergenic
TTCCAAGCATGGATCTGACC+AGG 0.591151 4:+87598077 None:intergenic
TTATGCAATCAATACCCTCA+CGG 0.592881 4:-87598736 MsG0480023608.01.T01:CDS
ATCTAACCATCTCTATGGTG+GGG 0.594533 4:-87598289 MsG0480023608.01.T01:CDS
AAAACGTTAAACAATGGCAA+TGG 0.596651 4:-87597163 MsG0480023608.01.T01:CDS
GCGACTATGAGATTCTCCAT+TGG 0.596695 4:+87597789 None:intergenic
GATATGGAGTTCATCAGCCT+GGG 0.597149 4:+87599017 None:intergenic
AAATCATCTCAGCATTTCAA+GGG 0.598277 4:-87599242 MsG0480023608.01.T01:CDS
TGCAGGCTCAGAGATGGGAA+TGG 0.600438 4:+87596550 None:intergenic
AGTTAAAAGTACAGTTGCAG+TGG 0.601472 4:+87598320 None:intergenic
AATATGCCTAAATTCACCAA+TGG 0.602518 4:-87597805 MsG0480023608.01.T01:CDS
ACTTGCTGGCATTGAACCGG+AGG 0.603999 4:-87598400 MsG0480023608.01.T01:CDS
CCTGTTAACTGTCATGATGG+AGG 0.606160 4:-87596691 MsG0480023608.01.T01:CDS
GAAACTAAAGCGTATAACCA+TGG 0.606590 4:-87597487 MsG0480023608.01.T01:CDS
CTTCCAAATGTAAAAGCACA+AGG 0.609245 4:-87598983 MsG0480023608.01.T01:CDS
ATGATTATGAGATTCTCGAA+TGG 0.609264 4:+87597372 None:intergenic
GTTACAGTTTGAAATGGCGG+TGG 0.614827 4:+87596859 None:intergenic
TGATACCCAAACCGTTCACA+AGG 0.618438 4:-87598181 MsG0480023608.01.T01:CDS
GGAATCTGGAACCTGTGTTG+AGG 0.619326 4:-87597426 MsG0480023608.01.T01:CDS
ACCGGCTGCAGTTACTGCCG+AGG 0.619972 4:-87596102 MsG0480023608.01.T01:CDS
AGTTTGAAAGCAGAAGTGCT+AGG 0.621435 4:-87598234 MsG0480023608.01.T01:CDS
ATCATGAAGAGAACATGATG+AGG 0.621582 4:-87597672 MsG0480023608.01.T01:CDS
TAAGGGTGAATTTGGTACAT+CGG 0.622183 4:-87596887 MsG0480023608.01.T01:CDS
TGAGGGTGAATTTGGTACAT+CGG 0.622460 4:-87597209 MsG0480023608.01.T01:CDS
GTTACTGCCGAGGAAATCCT+CGG 0.623444 4:-87596092 MsG0480023608.01.T01:CDS
GGAGAATCATCAAGAAAGTG+TGG 0.623687 4:-87598213 MsG0480023608.01.T01:CDS
CGGCAGGCAGTTAACTGCCG+AGG 0.623699 4:-87596132 MsG0480023608.01.T01:intron
GGAATCTGGAACCTGTGTTG+AGG 0.626333 4:-87597750 MsG0480023608.01.T01:CDS
AATCGAGCAACCAAACGCAA+TGG 0.628532 4:-87599210 MsG0480023608.01.T01:CDS
AAGGAGCTAGTCCTCAACTC+AGG 0.630553 4:+87597838 None:intergenic
TGGGAGAGTGACAACCAGCA+TGG 0.632248 4:-87597950 MsG0480023608.01.T01:CDS
GTCATGAAGGCAACAACATG+AGG 0.643679 4:-87597129 MsG0480023608.01.T01:CDS
TCCTCGGCAGTTAACTACCG+AGG 0.643863 4:+87596075 None:intergenic
AGCCAGTAAAGAAAATGACC+AGG 0.644245 4:-87596914 MsG0480023608.01.T01:intron
AATTGCAACTAAGTGAGGGT+GGG 0.644736 4:-87598941 MsG0480023608.01.T01:CDS
ACTGCAACTCAGTATTGTCG+TGG 0.650157 4:+87596830 None:intergenic
ACTGGTGGTAACACCCGTGA+GGG 0.653273 4:+87598722 None:intergenic
GCTGAATTGCAACTAAGTGA+GGG 0.654401 4:-87598945 MsG0480023608.01.T01:CDS
TTGGGTCAGACCAAGAGTAG+TGG 0.666010 4:+87598766 None:intergenic
TGTTAACTGTCATGATGGAG+GGG 0.666653 4:-87596689 MsG0480023608.01.T01:CDS
CAGGAGGGAAGTCCATGCCA+GGG 0.676123 4:-87596594 MsG0480023608.01.T01:CDS
CCAAGAGTAGTGGAATGCAA+AGG 0.680360 4:+87598776 None:intergenic
GTGGAGCTAGTCCTCAACAC+AGG 0.684626 4:+87597415 None:intergenic
AACTGGTGGTAACACCCGTG+AGG 0.686019 4:+87598721 None:intergenic
TGGAATGCAAAGGACAGTTG+AGG 0.692734 4:+87598786 None:intergenic
ATGATTGTGAGATTCTTGAG+TGG 0.696127 4:+87597690 None:intergenic
GTGGAGCTAGACCTCAACAC+AGG 0.721025 4:+87597739 None:intergenic
GAAAATTTAGCAGTTCAAGG+GGG 0.735832 4:-87596724 MsG0480023608.01.T01:CDS
AAGAGGTCAAAGTCCCTATG+CGG 0.737397 4:-87598434 MsG0480023608.01.T01:CDS
GCTTTAGTTTCAAAACCCGG+TGG 0.754863 4:+87597499 None:intergenic
AAAATGACCAGGTTGCTGAG+GGG 0.756061 4:-87597543 MsG0480023608.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAATTATTATTGAACT+GGG + Chr4:87598847-87598866 None:intergenic 15.0%
!! TTTGAAAATTATTATTGAAC+TGG + Chr4:87598848-87598867 None:intergenic 15.0%
!!! TCAATAATAATTTTCAAAGA+CGG - Chr4:87598850-87598869 MsG0480023608.01.T01:CDS 15.0%
!! ACAACAATTTCTAATAACAA+AGG + Chr4:87599132-87599151 None:intergenic 20.0%
!! CAAAACATTTCAGTTTATAA+TGG - Chr4:87596731-87596750 MsG0480023608.01.T01:CDS 20.0%
!! CTAAACATATTAGTAATGAT+AGG - Chr4:87597202-87597221 MsG0480023608.01.T01:CDS 20.0%
!! GATTCTTAATGAAAATGATT+TGG + Chr4:87598944-87598963 None:intergenic 20.0%
!!! GTTTTAGAATATCAATTTCA+GGG + Chr4:87596673-87596692 None:intergenic 20.0%
!!! TGAATTTAGGCATATTTTTT+CGG + Chr4:87597527-87597546 None:intergenic 20.0%
!!! TTTTTATCTTCAACATATAG+AGG + Chr4:87598023-87598042 None:intergenic 20.0%
!!! TTTTTTGAATATCAGTTTCA+TGG + Chr4:87596769-87596788 None:intergenic 20.0%
! AAAGTACAATCAGAGATTAA+TGG + Chr4:87598912-87598931 None:intergenic 25.0%
! GAAACTAAAACGTTAAACAA+TGG - Chr4:87598167-87598186 MsG0480023608.01.T01:CDS 25.0%
! GTTGTTAGATAACATGATAA+AGG + Chr4:87599092-87599111 None:intergenic 25.0%
! TAAATGCAAATTCTAAGCAT+GGG + Chr4:87598563-87598582 None:intergenic 25.0%
! TTAAATGCAAATTCTAAGCA+TGG + Chr4:87598564-87598583 None:intergenic 25.0%
! TTTAACGTTACAGTTTGAAA+TGG + Chr4:87598486-87598505 None:intergenic 25.0%
!! AACATAATGATGAGTTTGTT+TGG - Chr4:87598316-87598335 MsG0480023608.01.T01:CDS 25.0%
!! AGCATAATGAGAAATTTGTT+TGG - Chr4:87597993-87598012 MsG0480023608.01.T01:CDS 25.0%
!! GTGAATCTTTTATGAATTCT+TGG - Chr4:87598532-87598551 MsG0480023608.01.T01:intron 25.0%
!! TTTTCATCTTCAACAAATAG+AGG + Chr4:87597705-87597724 None:intergenic 25.0%
!!! ACCTGATCATTTTTCTTTAA+TGG + Chr4:87598104-87598123 None:intergenic 25.0%
!!! GAATTTAGGCATATTTTTTC+GGG + Chr4:87597526-87597545 None:intergenic 25.0%
!!! GGTTTTAGAATATCAATTTC+AGG + Chr4:87596674-87596693 None:intergenic 25.0%
!!! TTAAGAATCTTTTTGTTTCC+CGG - Chr4:87598955-87598974 MsG0480023608.01.T01:CDS 25.0%
AAAACGTTAAACAATGGCAA+TGG - Chr4:87598173-87598192 MsG0480023608.01.T01:CDS 30.0%
AAAATCCAAGAGAAAGAAAG+AGG - Chr4:87596885-87596904 MsG0480023608.01.T01:CDS 30.0%
AAATCATCTCAGCATTTCAA+GGG - Chr4:87596094-87596113 MsG0480023608.01.T01:CDS 30.0%
AATATGCCTAAATTCACCAA+TGG - Chr4:87597531-87597550 MsG0480023608.01.T01:CDS 30.0%
AGGAAAATTTAGCAGTTCAA+GGG - Chr4:87598610-87598629 MsG0480023608.01.T01:intron 30.0%
ATGATTATGAGATTCTCGAA+TGG + Chr4:87597967-87597986 None:intergenic 30.0%
GAAACATAGTTTACAACAGT+AGG + Chr4:87599070-87599089 None:intergenic 30.0%
GAAATCACTTTGTGAAAAAC+TGG + Chr4:87598706-87598725 None:intergenic 30.0%
GCCATTAAAGAAAAATGATC+AGG - Chr4:87598100-87598119 MsG0480023608.01.T01:CDS 30.0%
TAAATCATCTCAGCATTTCA+AGG - Chr4:87596093-87596112 MsG0480023608.01.T01:CDS 30.0%
TGCCAAATAATGAGTTGTAT+GGG - Chr4:87597367-87597386 MsG0480023608.01.T01:CDS 30.0%
TGTGTCACACATGTAAAATA+CGG - Chr4:87599170-87599189 MsG0480023608.01.T01:CDS 30.0%
TTATCAAGAGGATTATCAAC+TGG + Chr4:87596635-87596654 None:intergenic 30.0%
TTGAATATCAGTTTCATGGA+CGG + Chr4:87596765-87596784 None:intergenic 30.0%
! AACATGATGAGGAATTTGTT+TGG - Chr4:87597675-87597694 MsG0480023608.01.T01:CDS 30.0%
! AAGAAAGAGCGTAATATGAA+TGG - Chr4:87597447-87597466 MsG0480023608.01.T01:CDS 30.0%
! TACATTCTGAAGATAAAGTC+TGG - Chr4:87598988-87599007 MsG0480023608.01.T01:CDS 30.0%
! TCTTCTTACTGGATTTGTTT+GGG + Chr4:87596249-87596268 None:intergenic 30.0%
! TTCTTCTTACTGGATTTGTT+TGG + Chr4:87596250-87596269 None:intergenic 30.0%
! TTTGCATTTAAGACTCTTAC+AGG - Chr4:87598573-87598592 MsG0480023608.01.T01:intron 30.0%
! TTTTCATCTTCAACATACAG+AGG + Chr4:87598346-87598365 None:intergenic 30.0%
!! GTTGATAATCCTCTTGATAA+TGG - Chr4:87596635-87596654 MsG0480023608.01.T01:CDS 30.0%
!!! AACGTTTTAGTTTCAAAACC+TGG + Chr4:87598161-87598180 None:intergenic 30.0%
!!! AATTTAGACACACTTTTTCC+AGG + Chr4:87597624-87597643 None:intergenic 30.0%
!!! ACCTGGTCATTTTTCTTTAA+TGG + Chr4:87597786-87597805 None:intergenic 30.0%
!!! ATGAACTTTTTTATCCATGC+TGG + Chr4:87597403-87597422 None:intergenic 30.0%
!!! ATTACGCTCTTTCTTGTTTT+CGG + Chr4:87597442-87597461 None:intergenic 30.0%
!!! TAGACACATTTTTTCCAGAT+GGG + Chr4:87598261-87598280 None:intergenic 30.0%
!!! TTAGACACATTTTTTCCAGA+TGG + Chr4:87598262-87598281 None:intergenic 30.0%
!!! TTGTTGTTTTGCAATGTGTT+AGG - Chr4:87599012-87599031 MsG0480023608.01.T01:CDS 30.0%
AAACTGGAAGATCCAAAATC+TGG + Chr4:87598690-87598709 None:intergenic 35.0%
AAGCAACATGATAAGGAATC+TGG - Chr4:87597572-87597591 MsG0480023608.01.T01:CDS 35.0%
AATGTGTCTAAATTAGCCAC+TGG - Chr4:87598271-87598290 MsG0480023608.01.T01:CDS 35.0%
AGAATGTATTCACAAGTACC+GGG + Chr4:87598976-87598995 None:intergenic 35.0%
AGAGAATCTTGTAGTCATGA+AGG - Chr4:87597876-87597895 MsG0480023608.01.T01:CDS 35.0%
AGTCTTCAAAGATACTGCTT+GGG - Chr4:87597472-87597491 MsG0480023608.01.T01:CDS 35.0%
ATCATGAAGAGAACATGATG+AGG - Chr4:87597664-87597683 MsG0480023608.01.T01:CDS 35.0%
ATGATTGTGAGATTCTTGAG+TGG + Chr4:87597649-87597668 None:intergenic 35.0%
CAGAATGTATTCACAAGTAC+CGG + Chr4:87598977-87598996 None:intergenic 35.0%
CTCCCATACAACTCATTATT+TGG + Chr4:87597372-87597391 None:intergenic 35.0%
CTGCCAAATAATGAGTTGTA+TGG - Chr4:87597366-87597385 MsG0480023608.01.T01:CDS 35.0%
GAAAATTTAGCAGTTCAAGG+GGG - Chr4:87598612-87598631 MsG0480023608.01.T01:intron 35.0%
GAAACTAAAGCGTATAACCA+TGG - Chr4:87597849-87597868 MsG0480023608.01.T01:CDS 35.0%
GAGGAAAATTTAGCAGTTCA+AGG - Chr4:87598609-87598628 MsG0480023608.01.T01:intron 35.0%
GATTCTCCATTGGTGAATTT+AGG + Chr4:87597540-87597559 None:intergenic 35.0%
GCCATTAAAGAAAAATGACC+AGG - Chr4:87597782-87597801 MsG0480023608.01.T01:CDS 35.0%
GGAAAATTTAGCAGTTCAAG+GGG - Chr4:87598611-87598630 MsG0480023608.01.T01:intron 35.0%
TAAGGGTGAATTTGGTACAT+CGG - Chr4:87598449-87598468 MsG0480023608.01.T01:CDS 35.0%
TGATTGCATAATCCAAGCTT+GGG + Chr4:87596591-87596610 None:intergenic 35.0%
TGTTAGGTAAGCAAAATGCT+AGG - Chr4:87599028-87599047 MsG0480023608.01.T01:CDS 35.0%
TTATGCAATCAATACCCTCA+CGG - Chr4:87596600-87596619 MsG0480023608.01.T01:CDS 35.0%
TTCTCATTTCACTTTGACAC+AGG - Chr4:87598723-87598742 MsG0480023608.01.T01:intron 35.0%
TTGAATGCAAATTCCAAGCA+TGG + Chr4:87597273-87597292 None:intergenic 35.0%
TTGATTGCATAATCCAAGCT+TGG + Chr4:87596592-87596611 None:intergenic 35.0%
TTGTTTGACAACGTTACTAG+AGG - Chr4:87596791-87596810 MsG0480023608.01.T01:CDS 35.0%
TTTGACCTCTTTCTTTCTCT+TGG + Chr4:87596893-87596912 None:intergenic 35.0%
! AAAAATGATCAGGTTGCTGA+GGG - Chr4:87598110-87598129 MsG0480023608.01.T01:CDS 35.0%
! AACGTTACAGTTTGAAATGG+CGG + Chr4:87598483-87598502 None:intergenic 35.0%
! AACTGGGAATATTGTTGTTG+CGG + Chr4:87598831-87598850 None:intergenic 35.0%
! ACTCAAGAGCTTTATCAGAA+GGG + Chr4:87596966-87596985 None:intergenic 35.0%
! ACTGCTAAATTTTCCTCTAC+TGG + Chr4:87598606-87598625 None:intergenic 35.0%
! AGACCTTGTGCTTTTACATT+TGG + Chr4:87596359-87596378 None:intergenic 35.0%
! AGTTAAAAGTACAGTTGCAG+TGG + Chr4:87597019-87597038 None:intergenic 35.0%
! CTTCCAAATGTAAAAGCACA+AGG - Chr4:87596353-87596372 MsG0480023608.01.T01:intron 35.0%
! GTTAAAAGTACAGTTGCAGT+GGG + Chr4:87597018-87597037 None:intergenic 35.0%
! TACGCTTTAGTTTCAAAACC+CGG + Chr4:87597843-87597862 None:intergenic 35.0%
! TACTCAAGAGCTTTATCAGA+AGG + Chr4:87596967-87596986 None:intergenic 35.0%
! TCTAGAATGATGCAGAAGTT+GGG + Chr4:87597733-87597752 None:intergenic 35.0%
! TTCTTTGCATGGTTTTCTAC+TGG + Chr4:87596992-87597011 None:intergenic 35.0%
!! AACCTGGTCATTTTCTTTAC+TGG + Chr4:87598427-87598446 None:intergenic 35.0%
!! GCAACTGTACTTTTAACTAC+TGG - Chr4:87597021-87597040 MsG0480023608.01.T01:intron 35.0%
!! TTCTAGAATGATGCAGAAGT+TGG + Chr4:87597734-87597753 None:intergenic 35.0%
!! TTTGGGTTGGTATGAAATTC+TGG + Chr4:87596232-87596251 None:intergenic 35.0%
!!! ACATTTGGAAGCTTTTTCAC+AGG + Chr4:87596344-87596363 None:intergenic 35.0%
!!! AGGCATATTTTTTCGGGATA+AGG + Chr4:87597520-87597539 None:intergenic 35.0%
!!! GTTTTAGTTTCAAAACCTGG+AGG + Chr4:87598158-87598177 None:intergenic 35.0%
AAAAATGACCAGGTTGCTGA+GGG - Chr4:87597792-87597811 MsG0480023608.01.T01:CDS 40.0%
AAAGTTTCGACTCCTAGTGT+TGG - Chr4:87597339-87597358 MsG0480023608.01.T01:CDS 40.0%
AACTCAGCAGAAGAATCAAC+CGG + Chr4:87597315-87597334 None:intergenic 40.0%
AACTGCCGAGGAATTAAAAC+CGG - Chr4:87599216-87599235 MsG0480023608.01.T01:CDS 40.0%
AATTGCAACTAAGTGAGGGT+GGG - Chr4:87596395-87596414 MsG0480023608.01.T01:intron 40.0%
ACAAGTGGAAAAACCTGAAG+TGG - Chr4:87596510-87596529 MsG0480023608.01.T01:CDS 40.0%
ACTCTCTATGTAATGGTGCA+TGG + Chr4:87596441-87596460 None:intergenic 40.0%
AGAAAATGACCAGGTTGCTA+AGG - Chr4:87598431-87598450 MsG0480023608.01.T01:CDS 40.0%
AGCCAGTAAAGAAAATGACC+AGG - Chr4:87598422-87598441 MsG0480023608.01.T01:CDS 40.0%
AGCTGAATTGCAACTAAGTG+AGG - Chr4:87596390-87596409 MsG0480023608.01.T01:intron 40.0%
AGGCAACAACATAAGGAATC+TGG - Chr4:87597896-87597915 MsG0480023608.01.T01:CDS 40.0%
ATCAATTTCAGGGACTGTAG+AGG + Chr4:87596663-87596682 None:intergenic 40.0%
ATCTAACCATCTCTATGGTG+GGG - Chr4:87597047-87597066 MsG0480023608.01.T01:intron 40.0%
CAGTCTTCAAAGATACTGCT+TGG - Chr4:87597471-87597490 MsG0480023608.01.T01:CDS 40.0%
CATCTAACCATCTCTATGGT+GGG - Chr4:87597046-87597065 MsG0480023608.01.T01:intron 40.0%
CATTTCACTTTGACACAGGA+GGG - Chr4:87598727-87598746 MsG0480023608.01.T01:intron 40.0%
GAAAATGACCAGGTTGCTAA+GGG - Chr4:87598432-87598451 MsG0480023608.01.T01:CDS 40.0%
GAACCTGTTAACTGTCATGA+TGG - Chr4:87598642-87598661 MsG0480023608.01.T01:intron 40.0%
GATTTCTCATCATCCACTTC+AGG + Chr4:87596526-87596545 None:intergenic 40.0%
GCTGAATTGCAACTAAGTGA+GGG - Chr4:87596391-87596410 MsG0480023608.01.T01:intron 40.0%
GGAGAATCATCAAGAAAGTG+TGG - Chr4:87597123-87597142 MsG0480023608.01.T01:CDS 40.0%
GGAGAATCTCTTAGTCATGA+AGG - Chr4:87598194-87598213 MsG0480023608.01.T01:CDS 40.0%
GTCATGAAGGCAACAACATA+AGG - Chr4:87597889-87597908 MsG0480023608.01.T01:CDS 40.0%
GTGACTATGAAATTCTCCAG+TGG + Chr4:87598290-87598309 None:intergenic 40.0%
TACAAGATTCTCTGTTGCCA+TGG + Chr4:87597869-87597888 None:intergenic 40.0%
TAGGTAAGCAAAATGCTAGG+AGG - Chr4:87599031-87599050 MsG0480023608.01.T01:CDS 40.0%
TATGCAATCAATACCCTCAC+GGG - Chr4:87596601-87596620 MsG0480023608.01.T01:CDS 40.0%
TCAAGAGGATTATCAACTGG+TGG + Chr4:87596632-87596651 None:intergenic 40.0%
TCAATTTCAGGGACTGTAGA+GGG + Chr4:87596662-87596681 None:intergenic 40.0%
TCATTTCACTTTGACACAGG+AGG - Chr4:87598726-87598745 MsG0480023608.01.T01:intron 40.0%
TGAGGGTGAATTTGGTACAT+CGG - Chr4:87598127-87598146 MsG0480023608.01.T01:CDS 40.0%
TGCACCATTACATAGAGAGT+CGG - Chr4:87596441-87596460 MsG0480023608.01.T01:intron 40.0%
TTAACTACCGAGGATTTCCT+CGG + Chr4:87599254-87599273 None:intergenic 40.0%
TTTCCCGACTCTCTATGTAA+TGG + Chr4:87596448-87596467 None:intergenic 40.0%
TTTGCATTCAAGACTCTCAC+TGG - Chr4:87597282-87597301 MsG0480023608.01.T01:CDS 40.0%
! CGTTTGGTTGCTCGATTTTT+GGG + Chr4:87596123-87596142 None:intergenic 40.0%
! CTGTTAACTGTCATGATGGA+GGG - Chr4:87598646-87598665 MsG0480023608.01.T01:intron 40.0%
! CTTACATTTGTTGCTGAACC+CGG - Chr4:87598879-87598898 MsG0480023608.01.T01:CDS 40.0%
! CTTACTGGATTTGTTTGGGT+TGG + Chr4:87596245-87596264 None:intergenic 40.0%
! GAAAAATGATCAGGTTGCTG+AGG - Chr4:87598109-87598128 MsG0480023608.01.T01:CDS 40.0%
! TCTAGAACGATGCAGAAGTT+GGG + Chr4:87598051-87598070 None:intergenic 40.0%
! TGTTAACTGTCATGATGGAG+GGG - Chr4:87598647-87598666 MsG0480023608.01.T01:intron 40.0%
! TTACATTTGTTGCTGAACCC+GGG - Chr4:87598880-87598899 MsG0480023608.01.T01:CDS 40.0%
!! AGTTTGAAAGCAGAAGTGCT+AGG - Chr4:87597102-87597121 MsG0480023608.01.T01:intron 40.0%
!! TTCTAGAACGATGCAGAAGT+TGG + Chr4:87598052-87598071 None:intergenic 40.0%
!! TTCTCTCTTTCTAGTTGACG+TGG + Chr4:87596193-87596212 None:intergenic 40.0%
!!! GCTCTTTCTTGTTTTCGGAT+TGG + Chr4:87597437-87597456 None:intergenic 40.0%
!!! GGAAGCTTTTTCACAGGATA+TGG + Chr4:87596338-87596357 None:intergenic 40.0%
!!! TGACGCATTTTTTCCAGATG+TGG + Chr4:87597943-87597962 None:intergenic 40.0%
AAAATGACCAGGTTGCTGAG+GGG - Chr4:87597793-87597812 MsG0480023608.01.T01:CDS 45.0%
AAGAGGTCAAAGTCCCTATG+CGG - Chr4:87596902-87596921 MsG0480023608.01.T01:CDS 45.0%
AAGCAGAGACAAAAACCCAC+TGG - Chr4:87596855-87596874 MsG0480023608.01.T01:CDS 45.0%
AATCGAGCAACCAAACGCAA+TGG - Chr4:87596126-87596145 MsG0480023608.01.T01:CDS 45.0%
ACACTGTCACTGGAAAAAGC+AGG - Chr4:87596702-87596721 MsG0480023608.01.T01:CDS 45.0%
ACTGCAACTCAGTATTGTCG+TGG + Chr4:87598509-87598528 None:intergenic 45.0%
ACTGTCACTGGAAAAAGCAG+GGG - Chr4:87596704-87596723 MsG0480023608.01.T01:CDS 45.0%
AGACACATGACGAGTAAGCT+TGG + Chr4:87597079-87597098 None:intergenic 45.0%
AGAGATTAATGGCAGCTACC+CGG + Chr4:87598901-87598920 None:intergenic 45.0%
AGCAAAATGCTAGGAGGTTC+AGG - Chr4:87599037-87599056 MsG0480023608.01.T01:CDS 45.0%
ATCAGTTTCATGGACGGTAG+CGG + Chr4:87596759-87596778 None:intergenic 45.0%
CAAATTCACCCTTAGCAACC+TGG + Chr4:87598443-87598462 None:intergenic 45.0%
CACTGTCACTGGAAAAAGCA+GGG - Chr4:87596703-87596722 MsG0480023608.01.T01:CDS 45.0%
CAGGTTGCTAAGGGTGAATT+TGG - Chr4:87598441-87598460 MsG0480023608.01.T01:CDS 45.0%
CATGACAGTTAACAGGTTCC+TGG + Chr4:87598641-87598660 None:intergenic 45.0%
CCAGGATTCACCAAATGGTA+AGG + Chr4:87597244-87597263 None:intergenic 45.0%
CCTCCATCATGACAGTTAAC+AGG + Chr4:87598648-87598667 None:intergenic 45.0%
CCTGTTAACTGTCATGATGG+AGG - Chr4:87598645-87598664 MsG0480023608.01.T01:intron 45.0%
CCTTTGCATTCCACTACTCT+TGG - Chr4:87596560-87596579 MsG0480023608.01.T01:CDS 45.0%
CGTTCACAAGGAACAGCAAT+CGG - Chr4:87597167-87597186 MsG0480023608.01.T01:CDS 45.0%
CTGTTCCTTGTGAACGGTTT+GGG + Chr4:87597163-87597182 None:intergenic 45.0%
GAAAAATGACCAGGTTGCTG+AGG - Chr4:87597791-87597810 MsG0480023608.01.T01:CDS 45.0%
GAATTGCAACTAAGTGAGGG+TGG - Chr4:87596394-87596413 MsG0480023608.01.T01:intron 45.0%
GATATGGAGTTCATCAGCCT+GGG + Chr4:87596322-87596341 None:intergenic 45.0%
GCACCATTACATAGAGAGTC+GGG - Chr4:87596442-87596461 MsG0480023608.01.T01:intron 45.0%
GCATCTAACCATCTCTATGG+TGG - Chr4:87597045-87597064 MsG0480023608.01.T01:intron 45.0%
GCGACTATGAGATTCTCCAT+TGG + Chr4:87597550-87597569 None:intergenic 45.0%
GTAGAGGGTCCATTATCAAG+AGG + Chr4:87596647-87596666 None:intergenic 45.0%
GTCATGAAGGCAACAACATG+AGG - Chr4:87598207-87598226 MsG0480023608.01.T01:CDS 45.0%
GTCGCGAAAGCAACATGATA+AGG - Chr4:87597565-87597584 MsG0480023608.01.T01:CDS 45.0%
TACAGGTGTGATTCCAGTAG+AGG - Chr4:87598590-87598609 MsG0480023608.01.T01:intron 45.0%
TCAGAGCTCACCTTACCATT+TGG - Chr4:87597231-87597250 MsG0480023608.01.T01:CDS 45.0%
TCCAGTAAGAAGAAAGAGCC+CGG - Chr4:87596256-87596275 MsG0480023608.01.T01:intron 45.0%
TCTGACCAGGATTCACCAAA+TGG + Chr4:87597249-87597268 None:intergenic 45.0%
TCTGCAGCAGGTATGATTCT+AGG + Chr4:87596487-87596506 None:intergenic 45.0%
TGAGGGGGAATTTGGTACAT+TGG - Chr4:87597809-87597828 MsG0480023608.01.T01:CDS 45.0%
TGATACCCAAACCGTTCACA+AGG - Chr4:87597155-87597174 MsG0480023608.01.T01:CDS 45.0%
TGGAATGCAAAGGACAGTTG+AGG + Chr4:87596553-87596572 None:intergenic 45.0%
TGGTACATTGGATCAACCAC+CGG - Chr4:87597821-87597840 MsG0480023608.01.T01:CDS 45.0%
TTGCTTGTGTCCATTGCGTT+TGG + Chr4:87596139-87596158 None:intergenic 45.0%
TTTCTTCCCCACCATAGAGA+TGG + Chr4:87597056-87597075 None:intergenic 45.0%
TTTGGCAGTTCACCAACACT+AGG + Chr4:87597354-87597373 None:intergenic 45.0%
! AAAATACGGTTTTGCCCCCT+CGG - Chr4:87599184-87599203 MsG0480023608.01.T01:CDS 45.0%
! CCAAGAGTAGTGGAATGCAA+AGG + Chr4:87596563-87596582 None:intergenic 45.0%
! CCTTACCATTTGGTGAATCC+TGG - Chr4:87597241-87597260 MsG0480023608.01.T01:CDS 45.0%
! CGATTGCTGTTCCTTGTGAA+CGG + Chr4:87597169-87597188 None:intergenic 45.0%
! GCGTTTGGTTGCTCGATTTT+TGG + Chr4:87596124-87596143 None:intergenic 45.0%
! GCTTTAGTTTCAAAACCCGG+TGG + Chr4:87597840-87597859 None:intergenic 45.0%
! GGAGCATCTAACCATCTCTA+TGG - Chr4:87597042-87597061 MsG0480023608.01.T01:intron 45.0%
! GTATCAGCGTTGCCAGATTT+TGG - Chr4:87598675-87598694 MsG0480023608.01.T01:intron 45.0%
! GTTACAGTTTGAAATGGCGG+TGG + Chr4:87598480-87598499 None:intergenic 45.0%
! TGGTCTGTAAGCTTGGTAAC+TGG + Chr4:87596421-87596440 None:intergenic 45.0%
!!! AGACACACTTTTTCCAGGTG+TGG + Chr4:87597619-87597638 None:intergenic 45.0%
!!! TGCAGCCGGTTTTAATTCCT+CGG + Chr4:87599224-87599243 None:intergenic 45.0%
!!! TGGATTTTGACTGCACCAGT+GGG + Chr4:87596873-87596892 None:intergenic 45.0%
!!! TTGGATTTTGACTGCACCAG+TGG + Chr4:87596874-87596893 None:intergenic 45.0%
AAATGACCAGGTTGCTGAGG+GGG - Chr4:87597794-87597813 MsG0480023608.01.T01:CDS 50.0%
AACCTTGCAGGCTCAGAGAT+GGG + Chr4:87598794-87598813 None:intergenic 50.0%
AAGGAGCTAGTCCTCAACTC+AGG + Chr4:87597501-87597520 None:intergenic 50.0%
ACCTGCTGCAGACAAACAAG+TGG - Chr4:87596495-87596514 MsG0480023608.01.T01:CDS 50.0%
AGGCAACAACATGAGGAACC+TGG - Chr4:87598214-87598233 MsG0480023608.01.T01:CDS 50.0%
ATCCTGGTCAGATCCATGCT+TGG - Chr4:87597257-87597276 MsG0480023608.01.T01:CDS 50.0%
CAGGTTGCTGAGGGTGAATT+TGG - Chr4:87598119-87598138 MsG0480023608.01.T01:CDS 50.0%
CCAGTGACAGTGTCAAATGC+AGG + Chr4:87596695-87596714 None:intergenic 50.0%
CCTGCATTTGACACTGTCAC+TGG - Chr4:87596692-87596711 MsG0480023608.01.T01:CDS 50.0%
GAGATTAATGGCAGCTACCC+GGG + Chr4:87598900-87598919 None:intergenic 50.0%
GCTGTTCCTTGTGAACGGTT+TGG + Chr4:87597164-87597183 None:intergenic 50.0%
GGATATGGAGTTCATCAGCC+TGG + Chr4:87596323-87596342 None:intergenic 50.0%
GGTACATTGGATCAACCACC+GGG - Chr4:87597822-87597841 MsG0480023608.01.T01:CDS 50.0%
GTTACTGCCGAGGAAATCCT+CGG - Chr4:87599244-87599263 MsG0480023608.01.T01:CDS 50.0%
TAGTCCTCAACACAGGTTCC+AGG + Chr4:87597917-87597936 None:intergenic 50.0%
TCAGTTTCATGGACGGTAGC+GGG + Chr4:87596758-87596777 None:intergenic 50.0%
TCCACTTGTTTGTCTGCAGC+AGG + Chr4:87596499-87596518 None:intergenic 50.0%
TGGTGCATGGTCTGTAAGCT+TGG + Chr4:87596428-87596447 None:intergenic 50.0%
TGTTGTTGCGGATCAACTCC+AGG + Chr4:87598819-87598838 None:intergenic 50.0%
TTATCAGAAGGGCTTGCCTC+CGG + Chr4:87596955-87596974 None:intergenic 50.0%
TTCCAAGCATGGATCTGACC+AGG + Chr4:87597262-87597281 None:intergenic 50.0%
TTGGGTCAGACCAAGAGTAG+TGG + Chr4:87596573-87596592 None:intergenic 50.0%
TTGTCGGGCTTCAAAACGAC+TGG - Chr4:87596285-87596304 MsG0480023608.01.T01:intron 50.0%
! AACTGTCATGATGGAGGGGA+TGG - Chr4:87598651-87598670 MsG0480023608.01.T01:intron 50.0%
! AGTCGCTTTGACAACCGCAT+AGG + Chr4:87596919-87596938 None:intergenic 50.0%
! GGAATCTGGAACCTGTGTTG+AGG - Chr4:87597586-87597605 MsG0480023608.01.T01:CDS 50.0%
! GTCGCTTTGACAACCGCATA+GGG + Chr4:87596918-87596937 None:intergenic 50.0%
!! GCAGTGGGCTTTTCTTTGCA+TGG + Chr4:87597003-87597022 None:intergenic 50.0%
!! TTGAGGACTAGCTCCACATC+TGG - Chr4:87597927-87597946 MsG0480023608.01.T01:CDS 50.0%
!!! AGTCGTTTTGAAGCCCGACA+AGG + Chr4:87596286-87596305 None:intergenic 50.0%
AACTGGTGGTAACACCCGTG+AGG + Chr4:87596618-87596637 None:intergenic 55.0%
AAGAGCCCGGCATTCCTTGT+CGG - Chr4:87596269-87596288 MsG0480023608.01.T01:intron 55.0%
ACTGGTGGTAACACCCGTGA+GGG + Chr4:87596617-87596636 None:intergenic 55.0%
CAAATTCCCCCTCAGCAACC+TGG + Chr4:87597803-87597822 None:intergenic 55.0%
CAACCTTGCAGGCTCAGAGA+TGG + Chr4:87598795-87598814 None:intergenic 55.0%
CAACTCCAGGACAACCTTGC+AGG + Chr4:87598806-87598825 None:intergenic 55.0%
CAGGTTGCTGAGGGGGAATT+TGG - Chr4:87597801-87597820 MsG0480023608.01.T01:CDS 55.0%
CGGTTGTCAAAGCGACTTGC+TGG - Chr4:87596922-87596941 MsG0480023608.01.T01:intron 55.0%
CTCTTGGTCTGACCCAAGCT+TGG - Chr4:87596576-87596595 MsG0480023608.01.T01:CDS 55.0%
GACTCTCACTGGTGCTTTGC+CGG - Chr4:87597293-87597312 MsG0480023608.01.T01:CDS 55.0%
GCCGGGCTCTTTCTTCTTAC+TGG + Chr4:87596260-87596279 None:intergenic 55.0%
GGAACCTGGAACCTGTGTTG+AGG - Chr4:87598228-87598247 MsG0480023608.01.T01:CDS 55.0%
GTGGAGCTAGACCTCAACAC+AGG + Chr4:87597600-87597619 None:intergenic 55.0%
GTGGAGCTAGTCCTCAACAC+AGG + Chr4:87597924-87597943 None:intergenic 55.0%
TGAAGCCCGACAAGGAATGC+CGG + Chr4:87596278-87596297 None:intergenic 55.0%
TGCAGGCTCAGAGATGGGAA+TGG + Chr4:87598789-87598808 None:intergenic 55.0%
TGCTTGGGCAACCTGAGTTG+AGG - Chr4:87597487-87597506 MsG0480023608.01.T01:CDS 55.0%
TGGGAGAGTGACAACCAGCA+TGG - Chr4:87597386-87597405 MsG0480023608.01.T01:CDS 55.0%
TGGGAGCTAGTCCTCAACAC+AGG + Chr4:87598242-87598261 None:intergenic 55.0%
TTCCCATCTCTGAGCCTGCA+AGG - Chr4:87598789-87598808 MsG0480023608.01.T01:CDS 55.0%
! ACTTGCTGGCATTGAACCGG+AGG - Chr4:87596936-87596955 MsG0480023608.01.T01:intron 55.0%
! CTCATTGATGACTGCTGCCC+TGG + Chr4:87598762-87598781 None:intergenic 55.0%
! TTGAGGTCTAGCTCCACACC+TGG - Chr4:87597603-87597622 MsG0480023608.01.T01:CDS 55.0%
!! GCGACTTGCTGGCATTGAAC+CGG - Chr4:87596933-87596952 MsG0480023608.01.T01:intron 55.0%
!! GTTGAGGACTAGCTCCCATC+TGG - Chr4:87598244-87598263 MsG0480023608.01.T01:CDS 55.0%
ACAGGAGGGAAGTCCATGCC+AGG - Chr4:87598741-87598760 MsG0480023608.01.T01:CDS 60.0%
AGAGCCCGGCATTCCTTGTC+GGG - Chr4:87596270-87596289 MsG0480023608.01.T01:intron 60.0%
CAGGAGGGAAGTCCATGCCA+GGG - Chr4:87598742-87598761 MsG0480023608.01.T01:CDS 60.0%
CAGTTAACTGCCTGCCGAGG+GGG + Chr4:87599201-87599220 None:intergenic 60.0%
CGGGCTTCAAAACGACTGGC+TGG - Chr4:87596289-87596308 MsG0480023608.01.T01:intron 60.0%
CTGAGCCTGCAAGGTTGTCC+TGG - Chr4:87598798-87598817 MsG0480023608.01.T01:CDS 60.0%
GAAGCCCGACAAGGAATGCC+GGG + Chr4:87596277-87596296 None:intergenic 60.0%
GCAGTTAACTGCCTGCCGAG+GGG + Chr4:87599202-87599221 None:intergenic 60.0%
GGCAGTTAACTGCCTGCCGA+GGG + Chr4:87599203-87599222 None:intergenic 60.0%
TCCTCGGCAGTAACTGCAGC+CGG + Chr4:87599238-87599257 None:intergenic 60.0%
TGATGACTGCTGCCCTGGCA+TGG + Chr4:87598757-87598776 None:intergenic 60.0%
! GACTGGCTGGATCTGAACCC+AGG - Chr4:87596302-87596321 MsG0480023608.01.T01:intron 60.0%
!! AGCAGTTCAAGGGGGTGTCC+AGG - Chr4:87598620-87598639 MsG0480023608.01.T01:intron 60.0%
ACCGGCTGCAGTTACTGCCG+AGG - Chr4:87599234-87599253 MsG0480023608.01.T01:CDS 65.0%
CGGCAGGCAGTTAACTGCCG+AGG - Chr4:87599204-87599223 MsG0480023608.01.T01:CDS 65.0%
CGGCAGTTAACTGCCTGCCG+AGG + Chr4:87599204-87599223 None:intergenic 65.0%
GGTACATCGGAGCAGCCTCC+AGG - Chr4:87598140-87598159 MsG0480023608.01.T01:CDS 65.0%
! TACGGTTTTGCCCCCTCGGC+AGG - Chr4:87599188-87599207 MsG0480023608.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 87596085 87599273 87596085 ID=MsG0480023608.01;Name=MsG0480023608.01
Chr4 mRNA 87596085 87599273 87596085 ID=MsG0480023608.01.T01;Parent=MsG0480023608.01;Name=MsG0480023608.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|0.75|1|1|4|0|811
Chr4 exon 87598736 87599273 87598736 ID=MsG0480023608.01.T01:exon:1879;Parent=MsG0480023608.01.T01
Chr4 exon 87597115 87598504 87597115 ID=MsG0480023608.01.T01:exon:1878;Parent=MsG0480023608.01.T01
Chr4 exon 87596487 87596930 87596487 ID=MsG0480023608.01.T01:exon:1877;Parent=MsG0480023608.01.T01
Chr4 exon 87596085 87596148 87596085 ID=MsG0480023608.01.T01:exon:1876;Parent=MsG0480023608.01.T01
Chr4 CDS 87598736 87599273 87598736 ID=MsG0480023608.01.T01:cds;Parent=MsG0480023608.01.T01
Chr4 CDS 87597115 87598504 87597115 ID=MsG0480023608.01.T01:cds;Parent=MsG0480023608.01.T01
Chr4 CDS 87596487 87596930 87596487 ID=MsG0480023608.01.T01:cds;Parent=MsG0480023608.01.T01
Chr4 CDS 87596085 87596148 87596085 ID=MsG0480023608.01.T01:cds;Parent=MsG0480023608.01.T01
Gene Sequence

>MsG0480023608.01.T01

ATGGAAAATAAATCATCTCAGCATTTCAAGGGTGTCCCAAAAATCGAGCAACCAAACGCAATGGACACAAGCAACACTCTTTCTGAAGTAGTTTTCAAAGAACAACCACGTCAACTAGAAAGAGAGAAAATCGAAGACAATAAGCCAGAATTTCATACCAACCCAAACAAATCCAGTAAGAAGAAAGAGCCCGGCATTCCTTGTCGGGCTTCAAAACGACTGGCTGGATCTGAACCCAGGCTGATGAACTCCATATCCTGTGAAAAAGCTTCCAAATGTAAAAGCACAAGGTCTAAAGAAGTCATAGCTGAATTGCAACTAAGTGAGGGTGGGCCAGTTACCAAGCTTACAGACCATGCACCATTACATAGAGAGTCGGGAAATAAAAGAAGAAAATCTCCTAGAATCATACCTGCTGCAGACAAACAAGTGGAAAAACCTGAAGTGGATGATGAGAAATCAGAACCTCAACTGTCCTTTGCATTCCACTACTCTTGGTCTGACCCAAGCTTGGATTATGCAATCAATACCCTCACGGAAAGCAGAGACAAAAACCCACTGGTGCAGTCAAAATCCAAGAGAAAGAAAGAGGTCAAAGTCCCTATGCGGTTGTCAAAGCGACTTGCTGGCATTGAACCGGAGGCAAGCCCTTCTGATAAAGCTCTTGAGTATTCCAGTAGAAAACCATGCAAAGAAAAGCCCACTGCAACTGTACTTTTAACTACTGGAGCATCTAACCATCTCTATGGTGGGGAAGAAACCAAGCTTACTCGTCATGTGTCTGAGAGTTTGAAAGCAGAAGTGCTAGGAGAATCATCAAGAAAGTGTGGTAAGTCATATGATACCCAAACCGTTCACAAGGAACAGCAATCGGAGAGAGCTGAAGCTAAACATATTAGTAATGATAGGTCAAAGTCAGAGCTCACCTTACCATTTGGTGAATCCTGGTCAGATCCATGCTTGGAATTTGCATTCAAGACTCTCACTGGTGCTTTGCCGGTTGATTCTTCTGCTGAGTTTTTTAAAGTTTCGACTCCTAGTGTTGGTGAACTGCCAAATAATGAGTTGTATGGGAGAGTGACAACCAGCATGGATAAAAAAGTTCATGACAAAACAAACCAATCCGAAAACAAGAAAGAGCGTAATATGAATGGTCAGTCTTCAAAGATACTGCTTGGGCAACCTGAGTTGAGGACTAGCTCCTTATCCCGAAAAAATATGCCTAAATTCACCAATGGAGAATCTCATAGTCGCGAAAGCAACATGATAAGGAATCTGGAACCTGTGTTGAGGTCTAGCTCCACACCTGGAAAAAGTGTGTCTAAATTAACCACTCAAGAATCTCACAATCATGAAGAGAACATGATGAGGAATTTGTTTGGAGAACCTCTATTTGTTGAAGATGAAAACACAACCCAACTTCTGCATCATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAAATGACCAGGTTGCTGAGGGGGAATTTGGTACATTGGATCAACCACCGGGTTTTGAAACTAAAGCGTATAACCATGGCAACAGAGAATCTTGTAGTCATGAAGGCAACAACATAAGGAATCTGGAACCTGTGTTGAGGACTAGCTCCACATCTGGAAAAAATGCGTCAACCATTCGAGAATCTCATAATCATGAAGACAGCATAATGAGAAATTTGTTTGGAGAACCTCTATATGTTGAAGATAAAAACACAACCCAACTTCTGCATCGTTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAAATGATCAGGTTGCTGAGGGTGAATTTGGTACATCGGAGCAGCCTCCAGGTTTTGAAACTAAAACGTTAAACAATGGCAATGGAGAATCTCTTAGTCATGAAGGCAACAACATGAGGAACCTGGAACCTGTTAAAGAAAATGACCAGGTTGCTAAGGGTGAATTTGGTACATCGGAGCAACCACCGCCATTTCAAACTGTAACGTTAAACCACGACAATACTGAGTTGCAGTTCTGTGAATCTTTTATGAATTCTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACTCTTACAGGTGTGATTCCAGTAGAGGAAAATTTAGCAGTTCAAGGGGGTGTCCAGGAACCTGTTAACTGTCATGATGGAGGGGATGGTGTATCAGCGTTGCCAGATTTTGGATCTTCCAGTTTTTCACAAAGTGATTTCTCATTTCACTTTGACACAGGAGGGAAGTCCATGCCAGGGCAGCAGTCATCAATGAGCTCTCCATTCCCATCTCTGAGCCTGCAAGGTTGTCCTGGAGTTGATCCGCAACAACAATATTCCCAGTTCAATAATAATTTTCAAAGACGGCAGTTAACTGCCGAGGAATTAAAACCGGCTGCAGTTACTGCCGAGGAAATCCTCGGTAGTTAA
Protein sequence

>MsG0480023608.01.T01

MENKSSQHFKGVPKIEQPNAMDTSNTLSEVVFKEQPRQLEREKIEDNKPEFHTNPNKSSKKKEPGIPCRASKRLAGSEPRLMNSISCEKASKCKSTRSKEVIAELQLSEGGPVTKLTDHAPLHRESGNKRRKSPRIIPAADKQVEKPEVDDEKSEPQLSFAFHYSWSDPSLDYAINTLTESRDKNPLVQSKSKRKKEVKVPMRLSKRLAGIEPEASPSDKALEYSSRKPCKEKPTATVLLTTGASNHLYGGEETKLTRHVSESLKAEVLGESSRKCGKSYDTQTVHKEQQSERAEAKHISNDRSKSELTLPFGESWSDPCLEFAFKTLTGALPVDSSAEFFKVSTPSVGELPNNELYGRVTTSMDKKVHDKTNQSENKKERNMNGQSSKILLGQPELRTSSLSRKNMPKFTNGESHSRESNMIRNLEPVLRSSSTPGKSVSKLTTQESHNHEENMMRNLFGEPLFVEDENTTQLLHHSRTNAYSQIHEEPLKKNDQVAEGEFGTLDQPPGFETKAYNHGNRESCSHEGNNIRNLEPVLRTSSTSGKNASTIRESHNHEDSIMRNLFGEPLYVEDKNTTQLLHRSRTNAYSQIHEEPLKKNDQVAEGEFGTSEQPPGFETKTLNNGNGESLSHEGNNMRNLEPVKENDQVAKGEFGTSEQPPPFQTVTLNHDNTELQFCESFMNSWSDPCLEFAFKTLTGVIPVEENLAVQGGVQEPVNCHDGGDGVSALPDFGSSSFSQSDFSFHFDTGGKSMPGQQSSMSSPFPSLSLQGCPGVDPQQQYSQFNNNFQRRQLTAEELKPAAVTAEEILGS*