AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003167.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003167.01.T01 MTR_1g055080 91.176 136 11 1 204 338 319 454 2.09e-72 241
MsG0180003167.01.T01 MTR_1g055080 74.312 109 21 1 323 424 583 691 1.67e-43 162
MsG0180003167.01.T01 MTR_1g055080 59.375 96 36 2 152 245 145 239 2.39e-23 103
MsG0180003167.01.T01 MTR_1g055080 95.833 48 2 0 98 145 1 48 7.34e-21 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003167.01.T01 AT5G26760 41.739 115 56 2 317 424 309 419 2.48e-20 93.2
MsG0180003167.01.T01 AT5G26760 41.739 115 56 2 317 424 614 724 5.60e-20 93.2

Find 83 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGCAACTGCGAGCTGTTT+TGG 0.105249 1:+57891012 MsG0180003167.01.T01:CDS
CTCGCAACTGCGAGCGATTT+GGG 0.115349 1:+57891062 MsG0180003167.01.T01:CDS
CATTGAATTTCCATCATAAA+TGG 0.130334 1:+57899024 MsG0180003167.01.T01:exon
CTTTGTGCAGTGAAAGAATT+TGG 0.146405 1:+57896386 MsG0180003167.01.T01:CDS
AACATTGGCAGAATTTAAAT+TGG 0.247143 1:-57896222 None:intergenic
GAATCATTGTCTCTTTGTTT+TGG 0.252817 1:-57895485 None:intergenic
TGCTCTCTGGAACTCCTAAA+AGG 0.258912 1:+57890963 MsG0180003167.01.T01:CDS
CAAACAGCTGGTCTTCTCTT+TGG 0.270227 1:-57895019 None:intergenic
CGGCACTGGGGAGGTGTCTT+TGG 0.285516 1:+57895421 MsG0180003167.01.T01:CDS
AGAATTTGGAAACATTAAAA+AGG 0.285942 1:+57896400 MsG0180003167.01.T01:CDS
TTAGATTTAAGAGAAGATTT+TGG 0.295505 1:-57896293 None:intergenic
GCTCGCAACTGCGAGCGATT+TGG 0.304315 1:+57891061 MsG0180003167.01.T01:CDS
GATGAGAAAATCAACAGTTC+TGG 0.329888 1:+57896353 MsG0180003167.01.T01:CDS
AGCATCAGAAGCAGTGCTTC+TGG 0.330590 1:+57896511 MsG0180003167.01.T01:CDS
AACTCAGTCGCTCTGTTACT+TGG 0.346040 1:+57896327 MsG0180003167.01.T01:CDS
CTCAATACTCAATGCTTTGA+AGG 0.351051 1:-57899117 None:intergenic
TTGCAATTGGCCCTCCTTGA+TGG 0.351205 1:+57894993 MsG0180003167.01.T01:CDS
ACAAAGAGACAATGATTCTA+AGG 0.351983 1:+57895490 MsG0180003167.01.T01:CDS
TAACCCTCAATTGCATTTGA+TGG 0.359086 1:-57895458 None:intergenic
GTTCTGAGTGGTTCACAAAT+AGG 0.360354 1:+57898917 MsG0180003167.01.T01:CDS
ACATCAATTACCAGCATCAT+TGG 0.377762 1:-57896545 None:intergenic
CTTCTCTTTGGATGCCATCA+AGG 0.393499 1:-57895007 None:intergenic
CACTGTTTCATTCTGAATGC+TGG 0.415973 1:-57897934 None:intergenic
AGAAACTTGCTTGCTTCTGA+TGG 0.424803 1:+57894929 MsG0180003167.01.T01:CDS
GAAGCACTGCTTCTGATGCT+TGG 0.426359 1:-57896508 None:intergenic
ATTGAATTTCCATCATAAAT+GGG 0.426414 1:+57899025 MsG0180003167.01.T01:exon
GGCGAGCAAAACGTGCTCTC+TGG 0.444746 1:+57890950 MsG0180003167.01.T01:CDS
GAACTTAATCAAGCACATAT+AGG 0.452290 1:+57899057 MsG0180003167.01.T01:three_prime_UTR
ATCCAGGATAAAACAGAAAC+CGG 0.452687 1:+57895401 MsG0180003167.01.T01:CDS
ATGAGAAAATCAACAGTTCT+GGG 0.455398 1:+57896354 MsG0180003167.01.T01:CDS
GAAGACCAGCTGTTTGCAGC+TGG 0.470370 1:+57895026 MsG0180003167.01.T01:CDS
GTGTCTTTGGAACAGTGGGC+TGG 0.477616 1:+57895434 MsG0180003167.01.T01:CDS
CAAGTTTCTAGAATTGCATC+AGG 0.478713 1:-57894915 None:intergenic
TAGGAATTTCTCTTCAACAT+TGG 0.487770 1:-57896237 None:intergenic
ACTCAGTCGCTCTGTTACTT+GGG 0.488356 1:+57896328 MsG0180003167.01.T01:CDS
GGCAGAATTTAAATTGGAAG+TGG 0.495798 1:-57896216 None:intergenic
GCTGGATACAATGTCGTTTG+TGG 0.496169 1:+57897903 MsG0180003167.01.T01:CDS
TGGACCATCAAATGCAATTG+AGG 0.498530 1:+57895454 MsG0180003167.01.T01:CDS
CCTCATTTCGCTTCTCAAAG+TGG 0.502724 1:+57898991 MsG0180003167.01.T01:CDS
CATCAATTACCAGCATCATT+GGG 0.503869 1:-57896544 None:intergenic
GGAGGTGTCTTTGGAACAGT+GGG 0.515557 1:+57895430 MsG0180003167.01.T01:CDS
TGCTTCTGATGCTTGGCTCA+AGG 0.515832 1:-57896501 None:intergenic
GATAAAACAGAAACCGGCAC+TGG 0.518194 1:+57895407 MsG0180003167.01.T01:CDS
CAGATCCAGCTGCAAACAGC+TGG 0.520179 1:-57895031 None:intergenic
GACTCGGATCCCAATGATGC+TGG 0.527843 1:+57896535 MsG0180003167.01.T01:CDS
GCTCTCTGGAACTCCTAAAA+GGG 0.532726 1:+57890964 MsG0180003167.01.T01:CDS
CAAAGACACCTCCCCAGTGC+CGG 0.533876 1:-57895420 None:intergenic
TGGAATGTTAAAACTTATTG+TGG 0.536576 1:+57894881 MsG0180003167.01.T01:CDS
AAGCAGTGCTTCTGGAGACT+CGG 0.538745 1:+57896519 MsG0180003167.01.T01:CDS
AAGGATTTCATTGTACCACT+TGG 0.557921 1:+57898962 MsG0180003167.01.T01:CDS
GGACCATCAAATGCAATTGA+GGG 0.558886 1:+57895455 MsG0180003167.01.T01:CDS
TCGCAACTGCGAGCGATTTG+GGG 0.558971 1:+57891063 MsG0180003167.01.T01:CDS
AAATCTTCTCTTAAATCTAA+CGG 0.559728 1:+57896296 MsG0180003167.01.T01:CDS
GGGAGGTGTCTTTGGAACAG+TGG 0.560569 1:+57895429 MsG0180003167.01.T01:CDS
TCTTTGGATGCCATCAAGGA+GGG 0.561444 1:-57895003 None:intergenic
ATAAAACAGAAACCGGCACT+GGG 0.562398 1:+57895408 MsG0180003167.01.T01:CDS
CTCTTTGGATGCCATCAAGG+AGG 0.564450 1:-57895004 None:intergenic
GCTTTGAAGGTAAAAGAGAA+AGG 0.579118 1:-57899104 None:intergenic
CAGGAGGGACTTGTTTCTCA+AGG 0.580423 1:+57898032 MsG0180003167.01.T01:CDS
TTATCTCATACATGACGGAC+AGG 0.585032 1:+57898013 MsG0180003167.01.T01:CDS
GTAAAAGAGAAAGGTAACAT+TGG 0.589572 1:-57899095 None:intergenic
AGGTCCATCACTAATTTGTG+TGG 0.591299 1:+57895091 MsG0180003167.01.T01:CDS
CAGAACAGAATGATTCTGAA+AGG 0.593966 1:+57896138 MsG0180003167.01.T01:CDS
CTCATACATGACGGACAGGA+GGG 0.594470 1:+57898017 MsG0180003167.01.T01:CDS
CCACTTTGAGAAGCGAAATG+AGG 0.604648 1:-57898991 None:intergenic
AACAGAAACCGGCACTGGGG+AGG 0.610011 1:+57895412 MsG0180003167.01.T01:CDS
CCTAAAAGGGTTACTCGCAA+CGG 0.626699 1:+57890977 MsG0180003167.01.T01:CDS
ATACCCACACAAATTAGTGA+TGG 0.627168 1:-57895095 None:intergenic
TCTCATACATGACGGACAGG+AGG 0.627733 1:+57898016 MsG0180003167.01.T01:CDS
TACTCTTATCTCATACATGA+CGG 0.628188 1:+57898008 MsG0180003167.01.T01:CDS
GGTCCATCACTAATTTGTGT+GGG 0.629146 1:+57895092 MsG0180003167.01.T01:CDS
GCGAGTGCAATTGCTCGCAA+CGG 0.629842 1:+57890929 MsG0180003167.01.T01:CDS
CAGAATGAAACAGTGGCAAG+TGG 0.634857 1:+57897942 MsG0180003167.01.T01:CDS
GAGTGGTTCACAAATAGGCA+AGG 0.636728 1:+57898922 MsG0180003167.01.T01:CDS
AAGGAAATCGATACAACTCA+AGG 0.637391 1:+57896157 MsG0180003167.01.T01:CDS
TATGAAGATGTTGTAACTGA+AGG 0.642618 1:+57895071 MsG0180003167.01.T01:CDS
GTCATGTATGAGATAAGAGT+AGG 0.656182 1:-57898006 None:intergenic
GCGAGTGTTGCTACTCGCAA+CGG 0.657081 1:+57891098 MsG0180003167.01.T01:CDS
GAAATGAGGTGCTCGCCAAG+TGG 0.678879 1:-57898977 None:intergenic
TTGGTGAAGCAGGTTCTGAG+TGG 0.679031 1:+57898905 MsG0180003167.01.T01:intron
CAGCATTCAGAATGAAACAG+TGG 0.697410 1:+57897935 MsG0180003167.01.T01:CDS
GAAATCGATACAACTCAAGG+AGG 0.703199 1:+57896160 MsG0180003167.01.T01:CDS
TAAAACAGAAACCGGCACTG+GGG 0.778448 1:+57895409 MsG0180003167.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAATATTAGAAGT+GGG - Chr1:57891573-57891592 None:intergenic 10.0%
!! AAATAATTAAATAATTACGA+CGG + Chr1:57891773-57891792 MsG0180003167.01.T01:intron 10.0%
!! ATGTATTTAATGAAATATAT+GGG - Chr1:57892916-57892935 None:intergenic 10.0%
!! CAAGTAAATTTATTAAAAAA+TGG + Chr1:57892705-57892724 MsG0180003167.01.T01:intron 10.0%
!! TAAAATAAAAATATTAGAAG+TGG - Chr1:57891574-57891593 None:intergenic 10.0%
!! TATGTATTTAATGAAATATA+TGG - Chr1:57892917-57892936 None:intergenic 10.0%
!!! AAACATTATAAATTTTTGAA+TGG + Chr1:57897575-57897594 MsG0180003167.01.T01:intron 10.0%
!!! AGTAATACTTTTTTTTTTAA+AGG + Chr1:57892938-57892957 MsG0180003167.01.T01:intron 10.0%
!!! TTATGATTTTTAGATATTAA+GGG - Chr1:57891640-57891659 None:intergenic 10.0%
!! AAATAAAAATATTAGAAGTG+GGG - Chr1:57891572-57891591 None:intergenic 15.0%
!! AATAATTAAATAATTACGAC+GGG + Chr1:57891774-57891793 MsG0180003167.01.T01:intron 15.0%
!! ACTATGAATTCATAATTATT+TGG - Chr1:57891845-57891864 None:intergenic 15.0%
!! AGGATTTCAAAAAATTATAT+TGG - Chr1:57895558-57895577 None:intergenic 15.0%
!! ATTAAATATTTATTACACTC+TGG + Chr1:57897242-57897261 MsG0180003167.01.T01:intron 15.0%
!! CACATGAAAAATATAATTAT+TGG - Chr1:57894498-57894517 None:intergenic 15.0%
!! GAATGATTATAAAGTTTAAT+TGG + Chr1:57895792-57895811 MsG0180003167.01.T01:intron 15.0%
!! GATATATTTACTCTATAATT+TGG + Chr1:57898566-57898585 MsG0180003167.01.T01:intron 15.0%
!! GGTATTAAATTATATTAAAC+CGG - Chr1:57893225-57893244 None:intergenic 15.0%
!! GGTCTATATAAAAATTATAT+TGG - Chr1:57893246-57893265 None:intergenic 15.0%
!! TACTAGCAAATAAAATAATA+AGG - Chr1:57898297-57898316 None:intergenic 15.0%
!!! AATAAATAGAGTAATTTGTA+TGG + Chr1:57892433-57892452 MsG0180003167.01.T01:intron 15.0%
!!! AATCATATTTTGTTTTTTCT+TGG + Chr1:57892984-57893003 MsG0180003167.01.T01:intron 15.0%
!!! ATTTCTAAATTTTGAAAAGA+AGG - Chr1:57897737-57897756 None:intergenic 15.0%
!!! GTTATGATTTTTAGATATTA+AGG - Chr1:57891641-57891660 None:intergenic 15.0%
!!! TAAAACATTGCTTTATTAAT+TGG + Chr1:57897531-57897550 MsG0180003167.01.T01:intron 15.0%
!!! TAATTATGAATTCATAGTTT+TGG + Chr1:57891847-57891866 MsG0180003167.01.T01:intron 15.0%
!!! TATGATTTTTAGATATTAAG+GGG - Chr1:57891639-57891658 None:intergenic 15.0%
!!! TATTTTATTTGCTAGTATTT+TGG + Chr1:57898300-57898319 MsG0180003167.01.T01:intron 15.0%
!!! TGATTTGGTTAAAATTAAAT+GGG + Chr1:57894268-57894287 MsG0180003167.01.T01:intron 15.0%
!!! TTGATTTGGTTAAAATTAAA+TGG + Chr1:57894267-57894286 MsG0180003167.01.T01:intron 15.0%
!! AAATCTTCTCTTAAATCTAA+CGG + Chr1:57896296-57896315 MsG0180003167.01.T01:CDS 20.0%
!! AAATGAATTTAGCATGAATT+CGG - Chr1:57891331-57891350 None:intergenic 20.0%
!! AAGAATTTCTATCAGTTAAT+GGG + Chr1:57897030-57897049 MsG0180003167.01.T01:intron 20.0%
!! AATAAGGATTAAATGTTTGT+TGG - Chr1:57898281-57898300 None:intergenic 20.0%
!! AATTCAAGTGTATAAATAGA+AGG - Chr1:57891510-57891529 None:intergenic 20.0%
!! AATTTATTAAAAAATGGCAG+CGG + Chr1:57892711-57892730 MsG0180003167.01.T01:intron 20.0%
!! ACACTAACAAATGTAATAAT+AGG - Chr1:57898464-57898483 None:intergenic 20.0%
!! ACCAAAGTTATTTATCTTAT+TGG + Chr1:57894057-57894076 MsG0180003167.01.T01:intron 20.0%
!! ACTAACTTTCAATATTATTG+AGG - Chr1:57891367-57891386 None:intergenic 20.0%
!! AGAAATTTCCAAAAAATCAT+GGG + Chr1:57897751-57897770 MsG0180003167.01.T01:intron 20.0%
!! AGAATTTGGAAACATTAAAA+AGG + Chr1:57896400-57896419 MsG0180003167.01.T01:CDS 20.0%
!! AGATGAATTATATTCACAAA+GGG - Chr1:57892803-57892822 None:intergenic 20.0%
!! ATAAGGATTAAATGTTTGTT+GGG - Chr1:57898280-57898299 None:intergenic 20.0%
!! ATACTATAATTGTAAAGTTG+AGG + Chr1:57895666-57895685 MsG0180003167.01.T01:intron 20.0%
!! ATATAAATAATGTGTGTCAT+TGG + Chr1:57893921-57893940 MsG0180003167.01.T01:intron 20.0%
!! ATCAGAACAATATAAACAAA+CGG - Chr1:57898063-57898082 None:intergenic 20.0%
!! ATGAATTTAAGTGATTTATG+AGG - Chr1:57891722-57891741 None:intergenic 20.0%
!! ATTGAATTTCCATCATAAAT+GGG + Chr1:57899025-57899044 MsG0180003167.01.T01:exon 20.0%
!! CAAAGTTATTTATCTTATTG+GGG + Chr1:57894059-57894078 MsG0180003167.01.T01:intron 20.0%
!! CACTAACAAATGTAATAATA+GGG - Chr1:57898463-57898482 None:intergenic 20.0%
!! CCAAAGTTATTTATCTTATT+GGG + Chr1:57894058-57894077 MsG0180003167.01.T01:intron 20.0%
!! CTAACTTTCAATATTATTGA+GGG - Chr1:57891366-57891385 None:intergenic 20.0%
!! GAAAACTGAAATAATAAGAT+AGG - Chr1:57898815-57898834 None:intergenic 20.0%
!! GAAATAAAACAAACATTAGT+TGG + Chr1:57897094-57897113 MsG0180003167.01.T01:intron 20.0%
!! TAGAAATTTCCAAAAAATCA+TGG + Chr1:57897750-57897769 MsG0180003167.01.T01:intron 20.0%
!! TAGATGAATTATATTCACAA+AGG - Chr1:57892804-57892823 None:intergenic 20.0%
!! TCATGTTCAATTATCAAAAT+CGG + Chr1:57891268-57891287 MsG0180003167.01.T01:intron 20.0%
!! TCTAAGAAAAATGCTAAAAA+AGG + Chr1:57895515-57895534 MsG0180003167.01.T01:CDS 20.0%
!! TCTCTTTATAATGTTTACAA+TGG + Chr1:57894794-57894813 MsG0180003167.01.T01:intron 20.0%
!!! AAGCAAAATTTCTCTTTTTT+TGG - Chr1:57894151-57894170 None:intergenic 20.0%
!!! AAGCATTTTATAATGATATC+AGG + Chr1:57898238-57898257 MsG0180003167.01.T01:intron 20.0%
!!! AATTGAAAAATTTGTTGGTT+AGG + Chr1:57893859-57893878 MsG0180003167.01.T01:intron 20.0%
!!! AGCAAAATTTCTCTTTTTTT+GGG - Chr1:57894150-57894169 None:intergenic 20.0%
!!! ATAATTTGGTTTATCTAATG+TGG + Chr1:57898580-57898599 MsG0180003167.01.T01:intron 20.0%
!!! ATGTTAGTTCTAAATTTTGT+TGG + Chr1:57894861-57894880 MsG0180003167.01.T01:intron 20.0%
!!! ATTCAATTGCTTTTTCAATT+AGG - Chr1:57896259-57896278 None:intergenic 20.0%
!!! CATTTAGAATAAACAAACAA+AGG - Chr1:57898351-57898370 None:intergenic 20.0%
!!! GCAAGTAAATTTTATTCATA+TGG - Chr1:57898680-57898699 None:intergenic 20.0%
!!! GGATTTTATTTTGTTAAGTT+TGG - Chr1:57898520-57898539 None:intergenic 20.0%
!!! GTATTAAATGCTCTTATTTA+AGG - Chr1:57893088-57893107 None:intergenic 20.0%
!!! TATCCATTTTTGTTTATATG+AGG + Chr1:57897844-57897863 MsG0180003167.01.T01:intron 20.0%
!!! TATTACATTTGTTAGTGTTT+TGG + Chr1:57898466-57898485 MsG0180003167.01.T01:intron 20.0%
!!! TGGATTTTTGTTTTTCAATT+GGG + Chr1:57894598-57894617 MsG0180003167.01.T01:intron 20.0%
!!! TTAGATTTAAGAGAAGATTT+TGG - Chr1:57896296-57896315 None:intergenic 20.0%
!!! TTGGATTTTTGTTTTTCAAT+TGG + Chr1:57894597-57894616 MsG0180003167.01.T01:intron 20.0%
!!! TTTTATCCACTACAATTTAA+TGG - Chr1:57892393-57892412 None:intergenic 20.0%
!!! TTTTATTTTGTTAAGTTTGG+AGG - Chr1:57898517-57898536 None:intergenic 20.0%
! AACATTGGCAGAATTTAAAT+TGG - Chr1:57896225-57896244 None:intergenic 25.0%
! AATATTTATTACACTCTGGT+AGG + Chr1:57897246-57897265 MsG0180003167.01.T01:intron 25.0%
! AATCTTCTTAAACATCAAAC+CGG - Chr1:57892679-57892698 None:intergenic 25.0%
! AGAGTAAATATATCTAAGCA+TGG - Chr1:57898560-57898579 None:intergenic 25.0%
! AGAGTATAAGAACAAAGAAA+TGG - Chr1:57897695-57897714 None:intergenic 25.0%
! AGAGTCAAACAAATCAAATT+CGG - Chr1:57896771-57896790 None:intergenic 25.0%
! AGTGTATAAATAGAAGGTTT+AGG - Chr1:57891504-57891523 None:intergenic 25.0%
! ATAATGTTTACAATGGATGA+GGG + Chr1:57894801-57894820 MsG0180003167.01.T01:intron 25.0%
! ATCTAATAAGCAATTCAAAC+CGG - Chr1:57892570-57892589 None:intergenic 25.0%
! ATGCTAAAATTGATGAAACT+TGG - Chr1:57897462-57897481 None:intergenic 25.0%
! ATTTCTTTGTTCTTATACTC+TGG + Chr1:57897694-57897713 MsG0180003167.01.T01:intron 25.0%
! CAAGGTAATTTAGCAAATAT+AGG - Chr1:57894036-57894055 None:intergenic 25.0%
! CATCCTCATATAAACAAAAA+TGG - Chr1:57897850-57897869 None:intergenic 25.0%
! CATCGTAATTTACTTCATTT+GGG + Chr1:57894690-57894709 MsG0180003167.01.T01:intron 25.0%
! CATTGAATTTCCATCATAAA+TGG + Chr1:57899024-57899043 MsG0180003167.01.T01:exon 25.0%
! CCCAATAAGATAAATAACTT+TGG - Chr1:57894061-57894080 None:intergenic 25.0%
! CTTCTTTGGCATATATATAT+GGG + Chr1:57896988-57897007 MsG0180003167.01.T01:intron 25.0%
! GAAAACTCAGTATAGAAATT+TGG - Chr1:57893948-57893967 None:intergenic 25.0%
! GAAATGATGTATATAAACTG+AGG + Chr1:57898784-57898803 MsG0180003167.01.T01:intron 25.0%
! GAAGAATTTCTATCAGTTAA+TGG + Chr1:57897029-57897048 MsG0180003167.01.T01:intron 25.0%
! GCTTCAATTGAAAAATTTGT+TGG + Chr1:57893854-57893873 MsG0180003167.01.T01:intron 25.0%
! GTTTGAATTGCTTATTAGAT+CGG + Chr1:57892570-57892589 MsG0180003167.01.T01:intron 25.0%
! TATAATGTTTACAATGGATG+AGG + Chr1:57894800-57894819 MsG0180003167.01.T01:intron 25.0%
! TATGTATTTCTTGGGAATAT+GGG + Chr1:57898746-57898765 MsG0180003167.01.T01:intron 25.0%
! TATGTTCCATTAAATTGTAG+TGG + Chr1:57892384-57892403 MsG0180003167.01.T01:intron 25.0%
! TCATCGTAATTTACTTCATT+TGG + Chr1:57894689-57894708 MsG0180003167.01.T01:intron 25.0%
! TCTTCTTTGGCATATATATA+TGG + Chr1:57896987-57897006 MsG0180003167.01.T01:intron 25.0%
! TGGAATGTTAAAACTTATTG+TGG + Chr1:57894881-57894900 MsG0180003167.01.T01:CDS 25.0%
! TTGGAAATTGAATTTGAACT+TGG + Chr1:57895327-57895346 MsG0180003167.01.T01:intron 25.0%
! TTTCAATTGGGATAAATTAG+TGG + Chr1:57894610-57894629 MsG0180003167.01.T01:intron 25.0%
! TTTGTGAGAATTGAGAATTT+AGG - Chr1:57891301-57891320 None:intergenic 25.0%
!! AAAAGAGAAATTTTGCTTCT+TGG + Chr1:57894153-57894172 MsG0180003167.01.T01:intron 25.0%
!! AGATAAATAACTTTGGTTCA+AGG - Chr1:57894054-57894073 None:intergenic 25.0%
!! GATGAAAAGTTGTGATTTTT+AGG - Chr1:57891153-57891172 None:intergenic 25.0%
!! TGATTGGTTAAAATTCACAT+GGG - Chr1:57894334-57894353 None:intergenic 25.0%
!! TTGATTGGTTAAAATTCACA+TGG - Chr1:57894335-57894354 None:intergenic 25.0%
!!! AAGCATTTGATAATGATATC+AGG + Chr1:57898132-57898151 MsG0180003167.01.T01:intron 25.0%
!!! CAATTTTAGCATATGTGAAA+AGG + Chr1:57897470-57897489 MsG0180003167.01.T01:intron 25.0%
!!! GCAAAATTTCTCTTTTTTTG+GGG - Chr1:57894149-57894168 None:intergenic 25.0%
!!! GTGTACATAGTTTTAAAAAC+CGG - Chr1:57893378-57893397 None:intergenic 25.0%
!!! GTTGAAAATTTGAGTTGAAT+TGG - Chr1:57893527-57893546 None:intergenic 25.0%
!!! GTTGATAGTATAAAAGAAGA+CGG + Chr1:57893412-57893431 MsG0180003167.01.T01:intron 25.0%
!!! TAATTTGTTAACCATTGTTC+TGG + Chr1:57898875-57898894 MsG0180003167.01.T01:intron 25.0%
!!! TATGTTTCGAAAGTATCATT+GGG + Chr1:57895860-57895879 MsG0180003167.01.T01:intron 25.0%
!!! TTATTTTACCCACATTACTA+TGG + Chr1:57898086-57898105 MsG0180003167.01.T01:intron 25.0%
!!! TTTGATAATGATATCAGGTA+AGG + Chr1:57898137-57898156 MsG0180003167.01.T01:intron 25.0%
AAACTTACATGTTTGTTCCT+CGG + Chr1:57895209-57895228 MsG0180003167.01.T01:intron 30.0%
AACGGTTTGTATTGGATTTA+GGG - Chr1:57893469-57893488 None:intergenic 30.0%
AAGAATTGTGAAGATTCAAG+AGG - Chr1:57892195-57892214 None:intergenic 30.0%
AATCAACAAAACTGTGGAAA+AGG + Chr1:57897368-57897387 MsG0180003167.01.T01:intron 30.0%
AATGGAACATAGTAGCAAAA+AGG - Chr1:57892375-57892394 None:intergenic 30.0%
ACAAAGAGACAATGATTCTA+AGG + Chr1:57895490-57895509 MsG0180003167.01.T01:CDS 30.0%
ACCAATCAAAAAGAATGTGT+TGG + Chr1:57894346-57894365 MsG0180003167.01.T01:intron 30.0%
ACCTAAAAACGACAGAAAAT+CGG - Chr1:57892103-57892122 None:intergenic 30.0%
AGAAACTGAACAATGTTCTT+AGG + Chr1:57895300-57895319 MsG0180003167.01.T01:intron 30.0%
ATAAGGCTATCTAATAGTCT+AGG - Chr1:57895578-57895597 None:intergenic 30.0%
ATGAGAAAATCAACAGTTCT+GGG + Chr1:57896354-57896373 MsG0180003167.01.T01:CDS 30.0%
ATTTGCATCAAACAAGGTAA+GGG - Chr1:57891394-57891413 None:intergenic 30.0%
CATATTCCCAAGAAATACAT+AGG - Chr1:57898747-57898766 None:intergenic 30.0%
CGATTGTCAATGACTTATTT+CGG - Chr1:57892339-57892358 None:intergenic 30.0%
CTATGTATTTCTTGGGAATA+TGG + Chr1:57898745-57898764 MsG0180003167.01.T01:intron 30.0%
CTTCTATCATTAAGAAAGCA+CGG - Chr1:57898408-57898427 None:intergenic 30.0%
CTTGAATCTTCACAATTCTT+CGG + Chr1:57892195-57892214 MsG0180003167.01.T01:intron 30.0%
CTTGTGCACAATAATGAATA+CGG - Chr1:57893820-57893839 None:intergenic 30.0%
GAACTTAATCAAGCACATAT+AGG + Chr1:57899057-57899076 MsG0180003167.01.T01:three_prime_UTR 30.0%
GAATAAACAAACAAAGGTGA+AGG - Chr1:57898345-57898364 None:intergenic 30.0%
GATTGTCAATGACTTATTTC+GGG - Chr1:57892338-57892357 None:intergenic 30.0%
GGTAATTGATGTTTCTTTAG+AGG + Chr1:57896556-57896575 MsG0180003167.01.T01:intron 30.0%
GTAAAAGAGAAAGGTAACAT+TGG - Chr1:57899098-57899117 None:intergenic 30.0%
GTATATTAAAATCACCCATC+AGG - Chr1:57895650-57895669 None:intergenic 30.0%
TACTCTTATCTCATACATGA+CGG + Chr1:57898008-57898027 MsG0180003167.01.T01:CDS 30.0%
TAGATATCGGATTTCATTGA+AGG + Chr1:57895162-57895181 MsG0180003167.01.T01:intron 30.0%
TAGCAAAATTGTTGACAGAT+GGG + Chr1:57897064-57897083 MsG0180003167.01.T01:intron 30.0%
TAGGAATTTCTCTTCAACAT+TGG - Chr1:57896240-57896259 None:intergenic 30.0%
TATGAAGATGTTGTAACTGA+AGG + Chr1:57895071-57895090 MsG0180003167.01.T01:CDS 30.0%
TATTCCATTTCTCAGAACTT+AGG - Chr1:57895693-57895712 None:intergenic 30.0%
TCCAAAAAATCATGGGTTTA+AGG + Chr1:57897758-57897777 MsG0180003167.01.T01:intron 30.0%
TCCCTTAAATTGCTATGTTT+CGG + Chr1:57892269-57892288 MsG0180003167.01.T01:intron 30.0%
TCTAATAAGCAATTCAAACC+GGG - Chr1:57892569-57892588 None:intergenic 30.0%
TGTTAGAATGATGCAAAAAC+TGG - Chr1:57891243-57891262 None:intergenic 30.0%
TTATATTAAACCGGATGACT+CGG - Chr1:57893216-57893235 None:intergenic 30.0%
TTCAAAACTATGGTTGTGTA+GGG - Chr1:57892498-57892517 None:intergenic 30.0%
TTTCAAAACTATGGTTGTGT+AGG - Chr1:57892499-57892518 None:intergenic 30.0%
TTTGAGCAAAAAATGGCATA+AGG - Chr1:57895595-57895614 None:intergenic 30.0%
TTTGGCATATATATATGGGA+GGG + Chr1:57896992-57897011 MsG0180003167.01.T01:intron 30.0%
! AACAATGTTCTTAGGTTGTT+TGG + Chr1:57895308-57895327 MsG0180003167.01.T01:intron 30.0%
! AGACACTTTTGAGCAAAAAA+TGG - Chr1:57895602-57895621 None:intergenic 30.0%
! ATCACATTCTCTTTCTGAAA+TGG - Chr1:57896117-57896136 None:intergenic 30.0%
! ATTAACAGTAAAGCTTTTGC+TGG + Chr1:57895239-57895258 MsG0180003167.01.T01:intron 30.0%
! CAAATTCAGTTACTCTGAAA+TGG + Chr1:57896727-57896746 MsG0180003167.01.T01:intron 30.0%
! CAATAGTTGTTATTGCTATG+CGG + Chr1:57898608-57898627 MsG0180003167.01.T01:intron 30.0%
! CATCTTCAAATAATTTGCCT+CGG + Chr1:57892126-57892145 MsG0180003167.01.T01:intron 30.0%
! GTTCTTATACTCTGGTTTAT+AGG + Chr1:57897702-57897721 MsG0180003167.01.T01:intron 30.0%
! TAAGTGCACAACTTTCTTTT+AGG + Chr1:57897873-57897892 MsG0180003167.01.T01:intron 30.0%
! TAATTTACTTCATTTGGGAC+TGG + Chr1:57894695-57894714 MsG0180003167.01.T01:intron 30.0%
! TCAAATTTTCAACCCTAATC+AGG + Chr1:57893534-57893553 MsG0180003167.01.T01:intron 30.0%
! TCCAACACATTCTTTTTGAT+TGG - Chr1:57894350-57894369 None:intergenic 30.0%
! TGTATTCTTTGTTTCCTGAT+GGG + Chr1:57895633-57895652 MsG0180003167.01.T01:intron 30.0%
! TTAACAGTAAAGCTTTTGCT+GGG + Chr1:57895240-57895259 MsG0180003167.01.T01:intron 30.0%
! TTCTATCATTAAGAAAGCAC+GGG - Chr1:57898407-57898426 None:intergenic 30.0%
! TTGTATTCTTTGTTTCCTGA+TGG + Chr1:57895632-57895651 MsG0180003167.01.T01:intron 30.0%
! TTTCTTTTCAACAGAATGAG+AGG - Chr1:57896078-57896097 None:intergenic 30.0%
!! ATGTTTCGAAAGTATCATTG+GGG + Chr1:57895861-57895880 MsG0180003167.01.T01:intron 30.0%
!! GAATCATTGTCTCTTTGTTT+TGG - Chr1:57895488-57895507 None:intergenic 30.0%
!! GTATGTTTCGAAAGTATCAT+TGG + Chr1:57895859-57895878 MsG0180003167.01.T01:intron 30.0%
!! TTAGTTTGTGTTAGAAGTGT+TGG - Chr1:57894230-57894249 None:intergenic 30.0%
!! TTCCTTAGTTTGTTTATGAG+TGG - Chr1:57897350-57897369 None:intergenic 30.0%
!! TTTTTCTGACTTGAAAATCC+AGG + Chr1:57895385-57895404 MsG0180003167.01.T01:CDS 30.0%
!!! AGTTGTGATTTTTAGGTTTC+TGG - Chr1:57891146-57891165 None:intergenic 30.0%
!!! GAGAAGATTTTGGTTTAGTA+TGG - Chr1:57896286-57896305 None:intergenic 30.0%
!!! TGCTGTTTTGAAATTGCAAT+TGG + Chr1:57894980-57894999 MsG0180003167.01.T01:CDS 30.0%
AACATTCAGTTGTTGATGCA+TGG + Chr1:57891896-57891915 MsG0180003167.01.T01:intron 35.0%
AAGGAAATCGATACAACTCA+AGG + Chr1:57896157-57896176 MsG0180003167.01.T01:CDS 35.0%
AAGGATTTCATTGTACCACT+TGG + Chr1:57898962-57898981 MsG0180003167.01.T01:CDS 35.0%
ACAGACCTTAGATATTACCT+AGG - Chr1:57891217-57891236 None:intergenic 35.0%
ACAGCATCTTTGACAAAAAC+AGG - Chr1:57894966-57894985 None:intergenic 35.0%
ACAGTCAAACTAAAACCTTC+TGG - Chr1:57896818-57896837 None:intergenic 35.0%
ACATCAATTACCAGCATCAT+TGG - Chr1:57896548-57896567 None:intergenic 35.0%
ACGTTCAGTTTGGAGAAAAA+GGG - Chr1:57891458-57891477 None:intergenic 35.0%
ACTTGGAACCAATGGAAAAT+TGG + Chr1:57895344-57895363 MsG0180003167.01.T01:intron 35.0%
AGAACTAACATCAGAAGACA+TGG - Chr1:57894852-57894871 None:intergenic 35.0%
AGATATATTAGAGCAAGCGA+TGG + Chr1:57897173-57897192 MsG0180003167.01.T01:intron 35.0%
AGATTGCTACCATAGTAATG+TGG - Chr1:57898098-57898117 None:intergenic 35.0%
AGCCACTCATAAACAAACTA+AGG + Chr1:57897345-57897364 MsG0180003167.01.T01:intron 35.0%
ATACCCACACAAATTAGTGA+TGG - Chr1:57895098-57895117 None:intergenic 35.0%
ATAGTAGCAAAAGTGACAAC+TGG - Chr1:57896936-57896955 None:intergenic 35.0%
ATCACCCTAGGTAATATCTA+AGG + Chr1:57891209-57891228 MsG0180003167.01.T01:intron 35.0%
ATCCAGGATAAAACAGAAAC+CGG + Chr1:57895401-57895420 MsG0180003167.01.T01:CDS 35.0%
ATGTGGATCCCATATGAATT+TGG + Chr1:57894303-57894322 MsG0180003167.01.T01:intron 35.0%
ATTCCCAAGAAATACATAGG+TGG - Chr1:57898744-57898763 None:intergenic 35.0%
ATTGGAAAGGATGGAGAATT+AGG + Chr1:57895362-57895381 MsG0180003167.01.T01:intron 35.0%
CAAACATGTAAGTTTCGTGT+AGG - Chr1:57895204-57895223 None:intergenic 35.0%
CAACGGTTTGTATTGGATTT+AGG - Chr1:57893470-57893489 None:intergenic 35.0%
CAATGGAAAATTGGAAAGGA+TGG + Chr1:57895353-57895372 MsG0180003167.01.T01:intron 35.0%
CAGAACAGAATGATTCTGAA+AGG + Chr1:57896138-57896157 MsG0180003167.01.T01:CDS 35.0%
CAGACCTTAGATATTACCTA+GGG - Chr1:57891216-57891235 None:intergenic 35.0%
CAGCTTAAAATGCTTGTAAG+AGG - Chr1:57894405-57894424 None:intergenic 35.0%
CATCAATTACCAGCATCATT+GGG - Chr1:57896547-57896566 None:intergenic 35.0%
CCAACAAAAGAATGTGCTAT+AGG - Chr1:57897409-57897428 None:intergenic 35.0%
CCCGAAACATAGCAATTTAA+GGG - Chr1:57892273-57892292 None:intergenic 35.0%
CCCTTAAATTGCTATGTTTC+GGG + Chr1:57892270-57892289 MsG0180003167.01.T01:intron 35.0%
CGCATAGCAATAACAACTAT+TGG - Chr1:57898610-57898629 None:intergenic 35.0%
CGCTTGCTCTAATATATCTA+CGG - Chr1:57897172-57897191 None:intergenic 35.0%
CGTGCTTTCTTAATGATAGA+AGG + Chr1:57898406-57898425 MsG0180003167.01.T01:intron 35.0%
CTAAATCCAATACAAACCGT+TGG + Chr1:57893468-57893487 MsG0180003167.01.T01:intron 35.0%
CTAAGGAATCAACAAAACTG+TGG + Chr1:57897362-57897381 MsG0180003167.01.T01:intron 35.0%
CTAGCAAAATTGTTGACAGA+TGG + Chr1:57897063-57897082 MsG0180003167.01.T01:intron 35.0%
CTATTTCCTTCTCTTTGTTG+AGG - Chr1:57896028-57896047 None:intergenic 35.0%
CTCAATACTCAATGCTTTGA+AGG - Chr1:57899120-57899139 None:intergenic 35.0%
CTCTAATATATCTACGGGTA+TGG - Chr1:57897166-57897185 None:intergenic 35.0%
CTTAATGATAGAAGGTTGCA+TGG + Chr1:57898414-57898433 MsG0180003167.01.T01:intron 35.0%
CTTTGGCATATATATATGGG+AGG + Chr1:57896991-57897010 MsG0180003167.01.T01:intron 35.0%
CTTTGTGCAGTGAAAGAATT+TGG + Chr1:57896386-57896405 MsG0180003167.01.T01:CDS 35.0%
GAACCAATGGAAAATTGGAA+AGG + Chr1:57895349-57895368 MsG0180003167.01.T01:intron 35.0%
GAATTTGAACTTGGAACCAA+TGG + Chr1:57895336-57895355 MsG0180003167.01.T01:intron 35.0%
GAGAAACTTTACTACTCCAA+CGG - Chr1:57893487-57893506 None:intergenic 35.0%
GATGAGAAAATCAACAGTTC+TGG + Chr1:57896353-57896372 MsG0180003167.01.T01:CDS 35.0%
GATTGCTACCATAGTAATGT+GGG - Chr1:57898097-57898116 None:intergenic 35.0%
GATTTGCATCAAACAAGGTA+AGG - Chr1:57891395-57891414 None:intergenic 35.0%
GCTTGCTCTAATATATCTAC+GGG - Chr1:57897171-57897190 None:intergenic 35.0%
GGAAACATTAAAAAGGAGTC+TGG + Chr1:57896407-57896426 MsG0180003167.01.T01:CDS 35.0%
GGCAGAATTTAAATTGGAAG+TGG - Chr1:57896219-57896238 None:intergenic 35.0%
GGGTGATAATTAGATGCTAT+TGG - Chr1:57891196-57891215 None:intergenic 35.0%
GTCATGTATGAGATAAGAGT+AGG - Chr1:57898009-57898028 None:intergenic 35.0%
GTTATATGTCCGAGTCATTT+CGG + Chr1:57893268-57893287 MsG0180003167.01.T01:intron 35.0%
TAACCAAATCAAAGAGAGTG+TGG - Chr1:57894259-57894278 None:intergenic 35.0%
TAACCCTCAATTGCATTTGA+TGG - Chr1:57895461-57895480 None:intergenic 35.0%
TAAGTACCTCAACAAAGAGA+AGG + Chr1:57896019-57896038 MsG0180003167.01.T01:intron 35.0%
TACGTTCAGTTTGGAGAAAA+AGG - Chr1:57891459-57891478 None:intergenic 35.0%
TAGCATATGTGAAAAGGAAC+TGG + Chr1:57897476-57897495 MsG0180003167.01.T01:intron 35.0%
TAGCATCTAATTATCACCCT+AGG + Chr1:57891197-57891216 MsG0180003167.01.T01:intron 35.0%
TATTAAAAAATGGCAGCGGT+GGG + Chr1:57892715-57892734 MsG0180003167.01.T01:intron 35.0%
TATTGGATGAAAGAACCATG+AGG - Chr1:57891179-57891198 None:intergenic 35.0%
TCAGAAGACTTACAAATAGG+AGG - Chr1:57892170-57892189 None:intergenic 35.0%
TCCCGAAACATAGCAATTTA+AGG - Chr1:57892274-57892293 None:intergenic 35.0%
TCCTATTTGTAAGTCTTCTG+AGG + Chr1:57892169-57892188 MsG0180003167.01.T01:intron 35.0%
TGGATGATTAAATCTCTTCG+TGG + Chr1:57893678-57893697 MsG0180003167.01.T01:intron 35.0%
TTATATGTCCGAGTCATTTC+GGG + Chr1:57893269-57893288 MsG0180003167.01.T01:intron 35.0%
TTATTAAAAAATGGCAGCGG+TGG + Chr1:57892714-57892733 MsG0180003167.01.T01:intron 35.0%
TTCCCAAGAAATACATAGGT+GGG - Chr1:57898743-57898762 None:intergenic 35.0%
TTCCCACCTATGTATTTCTT+GGG + Chr1:57898738-57898757 MsG0180003167.01.T01:intron 35.0%
TTTACAACGTACGTTCAGTT+TGG - Chr1:57891468-57891487 None:intergenic 35.0%
TTTCCCACCTATGTATTTCT+TGG + Chr1:57898737-57898756 MsG0180003167.01.T01:intron 35.0%
TTTGTTAAGTTTGGAGGTGA+AGG - Chr1:57898511-57898530 None:intergenic 35.0%
! AAAAAGGGTTGGCAATAAAG+TGG + Chr1:57895939-57895958 MsG0180003167.01.T01:intron 35.0%
! AAGCTTTTGCCCATTTATGA+TGG - Chr1:57899037-57899056 None:intergenic 35.0%
! AATGACTCGGACATATAACT+CGG - Chr1:57893267-57893286 None:intergenic 35.0%
! ACTTTATTGCCAACCCTTTT+TGG - Chr1:57895940-57895959 None:intergenic 35.0%
! ATAATTTGCCTCGGTACTTT+AGG + Chr1:57892135-57892154 MsG0180003167.01.T01:intron 35.0%
! ATACTCTGGTTTATAGGACA+AGG + Chr1:57897708-57897727 MsG0180003167.01.T01:intron 35.0%
! CAACTTTTCATCTATCCTCA+TGG + Chr1:57891161-57891180 MsG0180003167.01.T01:intron 35.0%
! CATCCTTTCCAATTTTCCAT+TGG - Chr1:57895355-57895374 None:intergenic 35.0%
! CATCTGTCAACAATTTTGCT+AGG - Chr1:57897065-57897084 None:intergenic 35.0%
! CCTATAGCACATTCTTTTGT+TGG + Chr1:57897406-57897425 MsG0180003167.01.T01:intron 35.0%
! CTATACTGAGTTTTCTTCTC+TGG + Chr1:57893953-57893972 MsG0180003167.01.T01:intron 35.0%
! TCTATCATTAAGAAAGCACG+GGG - Chr1:57898406-57898425 None:intergenic 35.0%
! TCTTTTACCCAGCATTTCAA+CGG - Chr1:57892888-57892907 None:intergenic 35.0%
! TGAAAAGGAACTGGTTTAGA+TGG + Chr1:57897485-57897504 MsG0180003167.01.T01:intron 35.0%
!! ATATTCACAAAGGGTACTTG+TGG - Chr1:57892794-57892813 None:intergenic 35.0%
!! CAAGTTTCTAGAATTGCATC+AGG - Chr1:57894918-57894937 None:intergenic 35.0%
!! GCTTTGAAGGTAAAAGAGAA+AGG - Chr1:57899107-57899126 None:intergenic 35.0%
!! TGGGACTGGTTTATCTTAAT+GGG + Chr1:57894709-57894728 MsG0180003167.01.T01:intron 35.0%
!! TTGGGACTGGTTTATCTTAA+TGG + Chr1:57894708-57894727 MsG0180003167.01.T01:intron 35.0%
!! TTTCTGAAATGGTAATCGAG+TGG - Chr1:57896106-57896125 None:intergenic 35.0%
!!! ATGAGTGGCTCTTCATTTTT+TGG - Chr1:57897335-57897354 None:intergenic 35.0%
!!! CACAACCATAGTTTTGAAAC+CGG + Chr1:57892500-57892519 MsG0180003167.01.T01:intron 35.0%
!!! GCCTTAAACCCATGATTTTT+TGG - Chr1:57897762-57897781 None:intergenic 35.0%
!!! GCGGATTTTTAGTTAAAGTG+AGG + Chr1:57898627-57898646 MsG0180003167.01.T01:intron 35.0%
!!! TCCGATTTTCTGTCGTTTTT+AGG + Chr1:57892099-57892118 MsG0180003167.01.T01:intron 35.0%
!!! TTGTCACTTTTGCTACTATG+TGG + Chr1:57896937-57896956 MsG0180003167.01.T01:intron 35.0%
AAAAGAGGAGAACAAGAGAG+AGG - Chr1:57891423-57891442 None:intergenic 40.0%
AAATGGTTGCCAATGTGGTA+TGG - Chr1:57897678-57897697 None:intergenic 40.0%
AACGACAGAAAATCGGAGAT+TGG - Chr1:57892096-57892115 None:intergenic 40.0%
AATGGTTGCCAATGTGGTAT+GGG - Chr1:57897677-57897696 None:intergenic 40.0%
ACATCAGAAGACATGGATCA+AGG - Chr1:57894845-57894864 None:intergenic 40.0%
ACGACAGAAAATCGGAGATT+GGG - Chr1:57892095-57892114 None:intergenic 40.0%
ACTACTCCAACGGTTTGTAT+TGG - Chr1:57893477-57893496 None:intergenic 40.0%
AGAGGGGTCACAAACATAAT+AGG - Chr1:57897312-57897331 None:intergenic 40.0%
AGTACTTTCCTCAACAGCAT+TGG - Chr1:57896682-57896701 None:intergenic 40.0%
ATAAAACAGAAACCGGCACT+GGG + Chr1:57895408-57895427 MsG0180003167.01.T01:CDS 40.0%
ATCCAAAAACATGAACGCGA+AGG - Chr1:57893663-57893682 None:intergenic 40.0%
ATGGGTTCCACAAAATCATG+TGG + Chr1:57894286-57894305 MsG0180003167.01.T01:intron 40.0%
ATGGTGCAGCTAAGTTATGT+GGG - Chr1:57898541-57898560 None:intergenic 40.0%
ATTGGGGCAAACAGACAAAA+TGG + Chr1:57895877-57895896 MsG0180003167.01.T01:intron 40.0%
CAAAGAAATGGTTGCCAATG+TGG - Chr1:57897683-57897702 None:intergenic 40.0%
CAACCACACTCTCTTTGATT+TGG + Chr1:57894253-57894272 MsG0180003167.01.T01:intron 40.0%
CAATGCATCTTGTGCAGTAT+CGG + Chr1:57896627-57896646 MsG0180003167.01.T01:intron 40.0%
CACTGTTTCATTCTGAATGC+TGG - Chr1:57897937-57897956 None:intergenic 40.0%
CAGCATTCAGAATGAAACAG+TGG + Chr1:57897935-57897954 MsG0180003167.01.T01:CDS 40.0%
CATCTTTGACAAAAACAGGC+TGG - Chr1:57894962-57894981 None:intergenic 40.0%
CATTAAAAAGGAGTCTGGTG+TGG + Chr1:57896412-57896431 MsG0180003167.01.T01:CDS 40.0%
CGATGTTATCCACGAAAAGA+AGG - Chr1:57896967-57896986 None:intergenic 40.0%
GAAATACATAGGTGGGAAAG+TGG - Chr1:57898736-57898755 None:intergenic 40.0%
GAAATCGATACAACTCAAGG+AGG + Chr1:57896160-57896179 MsG0180003167.01.T01:CDS 40.0%
GAACATTGTTCAGTTTCTCC+AGG - Chr1:57895298-57895317 None:intergenic 40.0%
GAGGGGTCACAAACATAATA+GGG - Chr1:57897311-57897330 None:intergenic 40.0%
GCCTCAGAAGACTTACAAAT+AGG - Chr1:57892173-57892192 None:intergenic 40.0%
GGAACATAGTAGCAAAAAGG+AGG - Chr1:57892372-57892391 None:intergenic 40.0%
GGACCATCAAATGCAATTGA+GGG + Chr1:57895455-57895474 MsG0180003167.01.T01:CDS 40.0%
GGATCCCATATGAATTTGGT+GGG + Chr1:57894307-57894326 MsG0180003167.01.T01:intron 40.0%
GTACTTTCCTCAACAGCATT+GGG - Chr1:57896681-57896700 None:intergenic 40.0%
GTCAAACTAAAACCTTCTGG+TGG - Chr1:57896815-57896834 None:intergenic 40.0%
GTCGAATCGCATAACTAAAC+CGG - Chr1:57893300-57893319 None:intergenic 40.0%
GTGACAACTGGAAGAAAGTT+CGG - Chr1:57896924-57896943 None:intergenic 40.0%
GTGGATAACATCGTCTTCTT+TGG + Chr1:57896974-57896993 MsG0180003167.01.T01:intron 40.0%
GTTAACCATTGTTCTGGTGT+TGG + Chr1:57898881-57898900 MsG0180003167.01.T01:intron 40.0%
GTTGAATGCGTACCTGATTA+GGG - Chr1:57893549-57893568 None:intergenic 40.0%
TACTGTTAATCACACAACCG+AGG - Chr1:57895229-57895248 None:intergenic 40.0%
TGGACCATCAAATGCAATTG+AGG + Chr1:57895454-57895473 MsG0180003167.01.T01:CDS 40.0%
TGGATCCCATATGAATTTGG+TGG + Chr1:57894306-57894325 MsG0180003167.01.T01:intron 40.0%
TTCGGAAACTCCAGTTTCTT+TGG - Chr1:57896753-57896772 None:intergenic 40.0%
TTGATGCATGGTCAGACTAA+TGG + Chr1:57891908-57891927 MsG0180003167.01.T01:intron 40.0%
! AACATCAAACCGGTTCAGTT+TGG - Chr1:57892669-57892688 None:intergenic 40.0%
! AGAAACTTGCTTGCTTCTGA+TGG + Chr1:57894929-57894948 MsG0180003167.01.T01:CDS 40.0%
! AGGTCCATCACTAATTTGTG+TGG + Chr1:57895091-57895110 MsG0180003167.01.T01:CDS 40.0%
! ATGGGATCCACATGATTTTG+TGG - Chr1:57894296-57894315 None:intergenic 40.0%
! CAAATCAAAGAGAGTGTGGT+TGG - Chr1:57894255-57894274 None:intergenic 40.0%
! GAGTAATTTGTATGGACCGT+TGG + Chr1:57892441-57892460 MsG0180003167.01.T01:intron 40.0%
! GATTTCATTGAAGGAGCACA+AGG + Chr1:57895171-57895190 MsG0180003167.01.T01:intron 40.0%
! GGAATCTGAGCTTGAGATTT+TGG - Chr1:57894128-57894147 None:intergenic 40.0%
! GGTCCATCACTAATTTGTGT+GGG + Chr1:57895092-57895111 MsG0180003167.01.T01:CDS 40.0%
! GTTCTGAGTGGTTCACAAAT+AGG + Chr1:57898917-57898936 MsG0180003167.01.T01:CDS 40.0%
! TCTGAAATGGCCAAAGAAAC+TGG + Chr1:57896740-57896759 MsG0180003167.01.T01:intron 40.0%
!! AGGACCTAAGTTCTGAGAAA+TGG + Chr1:57895686-57895705 MsG0180003167.01.T01:intron 40.0%
!! ATTCTGTTCCTAAAGTACCG+AGG - Chr1:57892146-57892165 None:intergenic 40.0%
!! CTGTCGATTTGCATCAAACA+AGG - Chr1:57891400-57891419 None:intergenic 40.0%
!! GGAAGAGTATGACGTTTTGA+AGG + Chr1:57898943-57898962 MsG0180003167.01.T01:CDS 40.0%
!! GGCTTCATTGATTTACTGCA+AGG + Chr1:57894631-57894650 MsG0180003167.01.T01:intron 40.0%
!! TTATCTCATACATGACGGAC+AGG + Chr1:57898013-57898032 MsG0180003167.01.T01:CDS 40.0%
!! TTTCTTTTAGGTACGCTTGC+TGG + Chr1:57897885-57897904 MsG0180003167.01.T01:intron 40.0%
!! TTTTTAGAGACCGAGTCATC+CGG + Chr1:57893203-57893222 MsG0180003167.01.T01:intron 40.0%
!!! ATATGGGCACTTGTTTTGGT+TGG + Chr1:57898762-57898781 MsG0180003167.01.T01:intron 40.0%
!!! GCTCTTCATTTTTTGGAGAG+GGG - Chr1:57897328-57897347 None:intergenic 40.0%
!!! GGCTCTTCATTTTTTGGAGA+GGG - Chr1:57897329-57897348 None:intergenic 40.0%
!!! TGGCTCTTCATTTTTTGGAG+AGG - Chr1:57897330-57897349 None:intergenic 40.0%
AACTCAGTCGCTCTGTTACT+TGG + Chr1:57896327-57896346 MsG0180003167.01.T01:CDS 45.0%
AGGCATGTTTCAAATGCCCT+AGG + Chr1:57892046-57892065 MsG0180003167.01.T01:intron 45.0%
AGTGTGAACCGTTGAAATGC+TGG + Chr1:57892877-57892896 MsG0180003167.01.T01:intron 45.0%
ATCCTGAACTCTGAACTGCA+TGG - Chr1:57894524-57894543 None:intergenic 45.0%
ATGAAATTTCCAGTGGTGGC+GGG - Chr1:57893599-57893618 None:intergenic 45.0%
CAACCTTATCTTGCCTTTGC+AGG - Chr1:57897643-57897662 None:intergenic 45.0%
CAACGGTTCACACTTTAAGC+TGG - Chr1:57892871-57892890 None:intergenic 45.0%
CACAATCGGCAGTTGGAAAA+TGG - Chr1:57895740-57895759 None:intergenic 45.0%
CAGAAGACATGGATCAAGGT+AGG - Chr1:57894841-57894860 None:intergenic 45.0%
CAGAATGAAACAGTGGCAAG+TGG + Chr1:57897942-57897961 MsG0180003167.01.T01:CDS 45.0%
CATGGTGCAGCTAAGTTATG+TGG - Chr1:57898542-57898561 None:intergenic 45.0%
CCAAACCAACACCAGAACAA+TGG - Chr1:57898889-57898908 None:intergenic 45.0%
CCTAAAAGGGTTACTCGCAA+CGG + Chr1:57890977-57890996 MsG0180003167.01.T01:CDS 45.0%
CCTCATTTCGCTTCTCAAAG+TGG + Chr1:57898991-57899010 MsG0180003167.01.T01:CDS 45.0%
CGATACTGCACAAGATGCAT+TGG - Chr1:57896629-57896648 None:intergenic 45.0%
CGTTGAATGCGTACCTGATT+AGG - Chr1:57893550-57893569 None:intergenic 45.0%
CTGCAAAGGCAAGATAAGGT+TGG + Chr1:57897641-57897660 MsG0180003167.01.T01:intron 45.0%
CTGGTCCGGTTTCAAAACTA+TGG - Chr1:57892508-57892527 None:intergenic 45.0%
CTTCCTGCAAAGGCAAGATA+AGG + Chr1:57897637-57897656 MsG0180003167.01.T01:intron 45.0%
CTTCTCTTTGGATGCCATCA+AGG - Chr1:57895010-57895029 None:intergenic 45.0%
GAGATTGGGTCGAAGAAGAA+AGG - Chr1:57892081-57892100 None:intergenic 45.0%
GAGTGGTTCACAAATAGGCA+AGG + Chr1:57898922-57898941 MsG0180003167.01.T01:CDS 45.0%
GATAAAACAGAAACCGGCAC+TGG + Chr1:57895407-57895426 MsG0180003167.01.T01:CDS 45.0%
GATCGGTTATGCAGTCAAAC+CGG + Chr1:57892587-57892606 MsG0180003167.01.T01:intron 45.0%
GATGAAATTTCCAGTGGTGG+CGG - Chr1:57893600-57893619 None:intergenic 45.0%
GCTATTGACCCATACCACAT+TGG + Chr1:57897666-57897685 MsG0180003167.01.T01:intron 45.0%
GGAGATGAAATTTCCAGTGG+TGG - Chr1:57893603-57893622 None:intergenic 45.0%
GGGACCCACCAAATTCATAT+GGG - Chr1:57894314-57894333 None:intergenic 45.0%
GGGAGAGAAAGTCAGAAAAG+AGG - Chr1:57891438-57891457 None:intergenic 45.0%
GGTGGAGATGAAATTTCCAG+TGG - Chr1:57893606-57893625 None:intergenic 45.0%
GGTTCAGTTTGGAAAAACCG+CGG - Chr1:57892658-57892677 None:intergenic 45.0%
GTGTGAACCGTTGAAATGCT+GGG + Chr1:57892878-57892897 MsG0180003167.01.T01:intron 45.0%
GTTCAGTTTGGAAAAACCGC+GGG - Chr1:57892657-57892676 None:intergenic 45.0%
TAAAACAGAAACCGGCACTG+GGG + Chr1:57895409-57895428 MsG0180003167.01.T01:CDS 45.0%
TAAGGCTGTCTGTTGCAGTT+AGG + Chr1:57897776-57897795 MsG0180003167.01.T01:intron 45.0%
TACAAGGCTCTGTGATCCAA+CGG - Chr1:57892460-57892479 None:intergenic 45.0%
TCTTTGGATGCCATCAAGGA+GGG - Chr1:57895006-57895025 None:intergenic 45.0%
TGCACAATGTTAGCGAGTTC+TGG + Chr1:57897608-57897627 MsG0180003167.01.T01:intron 45.0%
TGGGACCCACCAAATTCATA+TGG - Chr1:57894315-57894334 None:intergenic 45.0%
TTCCATGCAGTTCAGAGTTC+AGG + Chr1:57894519-57894538 MsG0180003167.01.T01:intron 45.0%
TTGGAGAAGCCAAAAAGGGT+TGG + Chr1:57895928-57895947 MsG0180003167.01.T01:intron 45.0%
! ACTCAGTCGCTCTGTTACTT+GGG + Chr1:57896328-57896347 MsG0180003167.01.T01:CDS 45.0%
! AGAGCCTTGTACAACACGAA+AGG + Chr1:57892469-57892488 MsG0180003167.01.T01:intron 45.0%
! AGGGATCAAGCGTTTTTGTC+AGG - Chr1:57898444-57898463 None:intergenic 45.0%
! AGGGCATTTGAAACATGCCT+AGG - Chr1:57892046-57892065 None:intergenic 45.0%
! CCACTTTGAGAAGCGAAATG+AGG - Chr1:57898994-57899013 None:intergenic 45.0%
! CTCCTTCGCGTTCATGTTTT+TGG + Chr1:57893658-57893677 MsG0180003167.01.T01:intron 45.0%
! CTGGAATTTGCTTCCTGCAA+AGG + Chr1:57897627-57897646 MsG0180003167.01.T01:intron 45.0%
! GCGGTTTTTCCAAACTGAAC+CGG + Chr1:57892657-57892676 MsG0180003167.01.T01:intron 45.0%
! GCTGGATACAATGTCGTTTG+TGG + Chr1:57897903-57897922 MsG0180003167.01.T01:CDS 45.0%
! GGGAATATGGGCACTTGTTT+TGG + Chr1:57898758-57898777 MsG0180003167.01.T01:intron 45.0%
! GGGCATTTGAAACATGCCTA+GGG - Chr1:57892045-57892064 None:intergenic 45.0%
! GGTTCATTGGTTGAACCACT+GGG - Chr1:57893329-57893348 None:intergenic 45.0%
! TCGACTTGCCACATTAGCTT+TGG - Chr1:57895774-57895793 None:intergenic 45.0%
! TGGTTCATTGGTTGAACCAC+TGG - Chr1:57893330-57893349 None:intergenic 45.0%
! TGTGGAATGCCTTCTTTTCG+TGG + Chr1:57896955-57896974 MsG0180003167.01.T01:intron 45.0%
! TGTTTGACTCTGAAGACACG+TGG + Chr1:57896780-57896799 MsG0180003167.01.T01:intron 45.0%
!! CAAACAGCTGGTCTTCTCTT+TGG - Chr1:57895022-57895041 None:intergenic 45.0%
!! CCATTGTTCTGGTGTTGGTT+TGG + Chr1:57898886-57898905 MsG0180003167.01.T01:intron 45.0%
!! GAGGTGCAATGTTTTAGACC+TGG + Chr1:57895277-57895296 MsG0180003167.01.T01:intron 45.0%
!! GATCAGTTGGCAAAGCATTG+TGG - Chr1:57895129-57895148 None:intergenic 45.0%
!! GCTCTCTGGAACTCCTAAAA+GGG + Chr1:57890964-57890983 MsG0180003167.01.T01:CDS 45.0%
!! TGCTCTCTGGAACTCCTAAA+AGG + Chr1:57890963-57890982 MsG0180003167.01.T01:CDS 45.0%
!! TGCTGTTGAGGAAAGTACTG+TGG + Chr1:57896683-57896702 MsG0180003167.01.T01:intron 45.0%
!!! GTTTTAAAAACCGGACCGCT+CGG - Chr1:57893369-57893388 None:intergenic 45.0%
!!! TGCCGGTTTCTGTTTTATCC+TGG - Chr1:57895406-57895425 None:intergenic 45.0%
!! TATATTAAGTATAAAAAAAT+TGG + Chr1:57894578-57894597 MsG0180003167.01.T01:intron 5.0%
!!! ATAATCATATTTTATTTAAA+AGG + Chr1:57893027-57893046 MsG0180003167.01.T01:intron 5.0%
!!! TTAATTTTAAATTAAAATCA+AGG + Chr1:57892845-57892864 MsG0180003167.01.T01:intron 5.0%
AAGAAAGGCAGAATGCGCCT+AGG - Chr1:57892066-57892085 None:intergenic 50.0%
ACAAGCAAATGCCATGCCCT+AGG + Chr1:57892006-57892025 MsG0180003167.01.T01:intron 50.0%
ACGGGGCAGCTAAGTTATGT+GGG - Chr1:57898389-57898408 None:intergenic 50.0%
AGAAAGGCAGAATGCGCCTA+GGG - Chr1:57892065-57892084 None:intergenic 50.0%
AGCATCAGAAGCAGTGCTTC+TGG + Chr1:57896511-57896530 MsG0180003167.01.T01:CDS 50.0%
ATCCGATATCTACCCTTCCG+AGG - Chr1:57895154-57895173 None:intergenic 50.0%
CATTGCACCTCTCATCTTGC+AGG - Chr1:57895268-57895287 None:intergenic 50.0%
CGGATTGACCCGAAATGACT+CGG - Chr1:57893280-57893299 None:intergenic 50.0%
CTCTTTGGATGCCATCAAGG+AGG - Chr1:57895007-57895026 None:intergenic 50.0%
CTGAGCTCTTCAACAACAGC+AGG - Chr1:57897139-57897158 None:intergenic 50.0%
CTGCTGTTGTTGAAGAGCTC+AGG + Chr1:57897137-57897156 MsG0180003167.01.T01:intron 50.0%
CTTTGCCAACTGATCGTCCT+CGG + Chr1:57895134-57895153 MsG0180003167.01.T01:intron 50.0%
GCGAGCGATGAATGTCAGTA+CGG + Chr1:57891120-57891139 MsG0180003167.01.T01:intron 50.0%
GCTGCCTTTCGTGTTGTACA+AGG - Chr1:57892476-57892495 None:intergenic 50.0%
GCTTGTATCTCATGCGCCTA+GGG - Chr1:57891992-57892011 None:intergenic 50.0%
GGGAGTAGTAGTTCACGGTT+CGG - Chr1:57893579-57893598 None:intergenic 50.0%
GTCCTCGGAAGGGTAGATAT+CGG + Chr1:57895149-57895168 MsG0180003167.01.T01:intron 50.0%
TGCAGGGTCCAAAGCTAATG+TGG + Chr1:57895763-57895782 MsG0180003167.01.T01:intron 50.0%
TGCTTCTGATGCTTGGCTCA+AGG - Chr1:57896504-57896523 None:intergenic 50.0%
TGCTTGTATCTCATGCGCCT+AGG - Chr1:57891993-57892012 None:intergenic 50.0%
TGGAAAAACCGCGGGTTCAT+CGG - Chr1:57892649-57892668 None:intergenic 50.0%
TGGTTGAACCACTGGGTCAA+TGG - Chr1:57893322-57893341 None:intergenic 50.0%
TGGTTTGATGCTCCACCAGA+AGG + Chr1:57896800-57896819 MsG0180003167.01.T01:intron 50.0%
TTGCAATTGGCCCTCCTTGA+TGG + Chr1:57894993-57895012 MsG0180003167.01.T01:CDS 50.0%
! AAGCAGTGCTTCTGGAGACT+CGG + Chr1:57896519-57896538 MsG0180003167.01.T01:CDS 50.0%
! ACCCCGACTTTTTGCATGCA+CGG + Chr1:57891951-57891970 MsG0180003167.01.T01:intron 50.0%
! AGAGTAATGGAACCTGACGG+TGG - Chr1:57893634-57893653 None:intergenic 50.0%
! CAGGAGGGACTTGTTTCTCA+AGG + Chr1:57898032-57898051 MsG0180003167.01.T01:CDS 50.0%
! CCGTTGCGAGTAACCCTTTT+AGG - Chr1:57890980-57890999 None:intergenic 50.0%
! CGAGTCATTTCGGGTCAATC+CGG + Chr1:57893278-57893297 MsG0180003167.01.T01:intron 50.0%
! CTCAACAGCATTGGGAGGAT+GGG - Chr1:57896673-57896692 None:intergenic 50.0%
! CTTTCCTCAACAGCATTGGG+AGG - Chr1:57896678-57896697 None:intergenic 50.0%
! GCGAGAGTAATGGAACCTGA+CGG - Chr1:57893637-57893656 None:intergenic 50.0%
! GGGTTGGCAATAAAGTGGTC+AGG + Chr1:57895944-57895963 MsG0180003167.01.T01:intron 50.0%
! TCTTGTGCAGTATCGGAAGC+AGG + Chr1:57896634-57896653 MsG0180003167.01.T01:intron 50.0%
!! CGGTTTTGACCGAGTCATAC+CGG - Chr1:57892619-57892638 None:intergenic 50.0%
!! CTCATACATGACGGACAGGA+GGG + Chr1:57898017-57898036 MsG0180003167.01.T01:CDS 50.0%
!! GAAGCACTGCTTCTGATGCT+TGG - Chr1:57896511-57896530 None:intergenic 50.0%
!! GGAGGTGTCTTTGGAACAGT+GGG + Chr1:57895430-57895449 MsG0180003167.01.T01:CDS 50.0%
!! GGCAAAGCATTGTGGCACAA+TGG - Chr1:57895121-57895140 None:intergenic 50.0%
!! GTTACGGGTCACTGGTTCAT+TGG - Chr1:57893342-57893361 None:intergenic 50.0%
!! TCGCAACTGCGAGCTGTTTT+GGG + Chr1:57891013-57891032 MsG0180003167.01.T01:CDS 50.0%
!! TCTCATACATGACGGACAGG+AGG + Chr1:57898016-57898035 MsG0180003167.01.T01:CDS 50.0%
!! TGGTGTTGGTTTGGTGAAGC+AGG + Chr1:57898895-57898914 MsG0180003167.01.T01:intron 50.0%
!! TTGGTGAAGCAGGTTCTGAG+TGG + Chr1:57898905-57898924 MsG0180003167.01.T01:intron 50.0%
!!! GTTTTGAAACCGGACCAGAC+CGG + Chr1:57892510-57892529 MsG0180003167.01.T01:intron 50.0%
AAAAACCGGACCGCTCGGTA+AGG - Chr1:57893364-57893383 None:intergenic 55.0%
AATTCAAACCGGGCACCCCA+CGG - Chr1:57892559-57892578 None:intergenic 55.0%
AGGGCATGCACTATGCACCT+AGG - Chr1:57892026-57892045 None:intergenic 55.0%
AGGTGCATAGTGCATGCCCT+AGG + Chr1:57892026-57892045 MsG0180003167.01.T01:intron 55.0%
CACGGGGCAGCTAAGTTATG+TGG - Chr1:57898390-57898409 None:intergenic 55.0%
CAGATCCAGCTGCAAACAGC+TGG - Chr1:57895034-57895053 None:intergenic 55.0%
CCAACTGATCGTCCTCGGAA+GGG + Chr1:57895139-57895158 MsG0180003167.01.T01:intron 55.0%
CCATCCTCCCAATGCTGTTG+AGG + Chr1:57896671-57896690 MsG0180003167.01.T01:intron 55.0%
CCCCGTGCATGCAAAAAGTC+GGG - Chr1:57891956-57891975 None:intergenic 55.0%
CCCGTGCATGCAAAAAGTCG+GGG - Chr1:57891955-57891974 None:intergenic 55.0%
CGATTCGACCATTGACCCAG+TGG + Chr1:57893311-57893330 MsG0180003167.01.T01:intron 55.0%
CGGGGCAGCTAAGTTATGTG+GGG - Chr1:57898388-57898407 None:intergenic 55.0%
CTCGCAACTGCGAGCGATTT+GGG + Chr1:57891062-57891081 MsG0180003167.01.T01:CDS 55.0%
GAAGACCAGCTGTTTGCAGC+TGG + Chr1:57895026-57895045 MsG0180003167.01.T01:CDS 55.0%
GACTCGGATCCCAATGATGC+TGG + Chr1:57896535-57896554 MsG0180003167.01.T01:CDS 55.0%
GCCCCGTGCATGCAAAAAGT+CGG - Chr1:57891957-57891976 None:intergenic 55.0%
GCGAAGGAGAGCGAGAGTAA+TGG - Chr1:57893647-57893666 None:intergenic 55.0%
GCGAGTGCAATTGCTCGCAA+CGG + Chr1:57890929-57890948 MsG0180003167.01.T01:CDS 55.0%
GCTGAAAACCGATGAACCCG+CGG + Chr1:57892638-57892657 MsG0180003167.01.T01:intron 55.0%
GGGCATGCACTATGCACCTA+GGG - Chr1:57892025-57892044 None:intergenic 55.0%
TCGCAACTGCGAGCGATTTG+GGG + Chr1:57891063-57891082 MsG0180003167.01.T01:CDS 55.0%
TCGGTAAGGTTACGGGTCAC+TGG - Chr1:57893350-57893369 None:intergenic 55.0%
TGACCCGTAACCTTACCGAG+CGG + Chr1:57893351-57893370 MsG0180003167.01.T01:intron 55.0%
TGCAACGCACAATCGGCAGT+TGG - Chr1:57895747-57895766 None:intergenic 55.0%
TGCACTATGCACCTAGGGCA+TGG - Chr1:57892020-57892039 None:intergenic 55.0%
TGGAACCTGACGGTGGTAGA+CGG - Chr1:57893627-57893646 None:intergenic 55.0%
TGGACCCTGCAACGCACAAT+CGG - Chr1:57895754-57895773 None:intergenic 55.0%
TTCATGGTTCCCGGTCCGAT+CGG - Chr1:57892536-57892555 None:intergenic 55.0%
! AACTGCCGATTGTGCGTTGC+AGG + Chr1:57895746-57895765 MsG0180003167.01.T01:intron 55.0%
! ACTGCCGATTGTGCGTTGCA+GGG + Chr1:57895747-57895766 MsG0180003167.01.T01:intron 55.0%
! CCCCGACTTTTTGCATGCAC+GGG + Chr1:57891952-57891971 MsG0180003167.01.T01:intron 55.0%
! CCCGACTTTTTGCATGCACG+GGG + Chr1:57891953-57891972 MsG0180003167.01.T01:intron 55.0%
! CCTCAACAGCATTGGGAGGA+TGG - Chr1:57896674-57896693 None:intergenic 55.0%
! CTCGCAACTGCGAGCTGTTT+TGG + Chr1:57891012-57891031 MsG0180003167.01.T01:CDS 55.0%
! GAAATGAGGTGCTCGCCAAG+TGG - Chr1:57898980-57898999 None:intergenic 55.0%
! GCGAGTGTTGCTACTCGCAA+CGG + Chr1:57891098-57891117 MsG0180003167.01.T01:CDS 55.0%
! GTGGCGGGAGTAGTAGTTCA+CGG - Chr1:57893584-57893603 None:intergenic 55.0%
!! CAAAGGGTACTTGTGGCGTG+TGG - Chr1:57892787-57892806 None:intergenic 55.0%
!! GGGAGGTGTCTTTGGAACAG+TGG + Chr1:57895429-57895448 MsG0180003167.01.T01:CDS 55.0%
!! GTGTCTTTGGAACAGTGGGC+TGG + Chr1:57895434-57895453 MsG0180003167.01.T01:CDS 55.0%
!!! GCGGGTTCATCGGTTTTCAG+CGG - Chr1:57892639-57892658 None:intergenic 55.0%
AACCTGACGGTGGTAGACGG+TGG - Chr1:57893624-57893643 None:intergenic 60.0%
ACCCCACGGTTCATGGTTCC+CGG - Chr1:57892545-57892564 None:intergenic 60.0%
ACCGGGAACCATGAACCGTG+GGG + Chr1:57892541-57892560 MsG0180003167.01.T01:intron 60.0%
ACTACTACTCCCGCCACCAC+TGG + Chr1:57893587-57893606 MsG0180003167.01.T01:intron 60.0%
CAAAGACACCTCCCCAGTGC+CGG - Chr1:57895423-57895442 None:intergenic 60.0%
CCCTTCCGAGGACGATCAGT+TGG - Chr1:57895142-57895161 None:intergenic 60.0%
CGGACCGCTCGGTAAGGTTA+CGG - Chr1:57893358-57893377 None:intergenic 60.0%
CGGCGTGAACCGGTATGACT+CGG + Chr1:57892607-57892626 MsG0180003167.01.T01:intron 60.0%
CGTAACCTTACCGAGCGGTC+CGG + Chr1:57893356-57893375 MsG0180003167.01.T01:intron 60.0%
CTGGGAGCCTGCAAGATGAG+AGG + Chr1:57895258-57895277 MsG0180003167.01.T01:intron 60.0%
GACCGGGAACCATGAACCGT+GGG + Chr1:57892540-57892559 MsG0180003167.01.T01:intron 60.0%
GCAGTCAAACCGGCGTGAAC+CGG + Chr1:57892597-57892616 MsG0180003167.01.T01:intron 60.0%
GCCAACTGATCGTCCTCGGA+AGG + Chr1:57895138-57895157 MsG0180003167.01.T01:intron 60.0%
GCTCGCAACTGCGAGCGATT+TGG + Chr1:57891061-57891080 MsG0180003167.01.T01:CDS 60.0%
GGACCGCTCGGTAAGGTTAC+GGG - Chr1:57893357-57893376 None:intergenic 60.0%
GGCGAGCAAAACGTGCTCTC+TGG + Chr1:57890950-57890969 MsG0180003167.01.T01:CDS 60.0%
GGGCGCATAGCAAACACCCT+AGG + Chr1:57891973-57891992 MsG0180003167.01.T01:intron 60.0%
! AACAGAAACCGGCACTGGGG+AGG + Chr1:57895412-57895431 MsG0180003167.01.T01:CDS 60.0%
!! CGAGTCATACCGGTTCACGC+CGG - Chr1:57892609-57892628 None:intergenic 60.0%
CTCCACCGTCTACCACCGTC+AGG + Chr1:57893619-57893638 MsG0180003167.01.T01:intron 65.0%
GGACCGGGAACCATGAACCG+TGG + Chr1:57892539-57892558 MsG0180003167.01.T01:intron 65.0%
! ACCATGAACCGTGGGGTGCC+CGG + Chr1:57892548-57892567 MsG0180003167.01.T01:intron 65.0%
!! CGGCACTGGGGAGGTGTCTT+TGG + Chr1:57895421-57895440 MsG0180003167.01.T01:CDS 65.0%
ACCAGACCGGCCGATCGGAC+CGG + Chr1:57892523-57892542 MsG0180003167.01.T01:intron 70.0%
ACCGGACCAGACCGGCCGAT+CGG + Chr1:57892518-57892537 MsG0180003167.01.T01:intron 70.0%
ACCGGGCACCCCACGGTTCA+TGG - Chr1:57892552-57892571 None:intergenic 70.0%
TCCGATCGGCCGGTCTGGTC+CGG - Chr1:57892522-57892541 None:intergenic 70.0%
TGGTTCCCGGTCCGATCGGC+CGG - Chr1:57892532-57892551 None:intergenic 70.0%
CCAGACCGGCCGATCGGACC+GGG + Chr1:57892524-57892543 MsG0180003167.01.T01:intron 75.0%
! CCCGGTCCGATCGGCCGGTC+TGG - Chr1:57892527-57892546 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 57890926 57899155 57890926 ID=MsG0180003167.01;Name=MsG0180003167.01
Chr1 mRNA 57890926 57899155 57890926 ID=MsG0180003167.01.T01;Parent=MsG0180003167.01;Name=MsG0180003167.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0.2|0.33|0.83|1|1|6|113|442
Chr1 exon 57890926 57891136 57890926 ID=MsG0180003167.01.T01:exon:22828;Parent=MsG0180003167.01.T01
Chr1 exon 57894868 57895113 57894868 ID=MsG0180003167.01.T01:exon:22829;Parent=MsG0180003167.01.T01
Chr1 exon 57895384 57895536 57895384 ID=MsG0180003167.01.T01:exon:22830;Parent=MsG0180003167.01.T01
Chr1 exon 57896123 57896556 57896123 ID=MsG0180003167.01.T01:exon:22831;Parent=MsG0180003167.01.T01
Chr1 exon 57897895 57898053 57897895 ID=MsG0180003167.01.T01:exon:22832;Parent=MsG0180003167.01.T01
Chr1 exon 57898917 57899155 57898917 ID=MsG0180003167.01.T01:exon:22833;Parent=MsG0180003167.01.T01
Chr1 CDS 57890926 57891136 57890926 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 CDS 57894868 57895113 57894868 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 CDS 57895384 57895536 57895384 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 CDS 57896123 57896556 57896123 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 CDS 57897895 57898053 57897895 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 CDS 57898917 57899042 57898917 ID=MsG0180003167.01.T01:cds;Parent=MsG0180003167.01.T01
Chr1 three_prime_UTR 57899043 57899155 57899043 ID=MsG0180003167.01.T01:three_prime_utr;Parent=MsG0180003167.01.T01
Gene Sequence

>MsG0180003167.01.T01

ATGGCGAGTGCAATTGCTCGCAACGGCGAGCAAAACGTGCTCTCTGGAACTCCTAAAAGGGTTACTCGCAACGGCGAGTTACTTTGCTCGCAACTGCGAGCTGTTTTGGGTTACTCGCAACGCGAGTGTGTTCTTGCTCGCAACTGCGAGCGATTTGGGGTTACTTGCAACTGCGAGTGTTGCTACTCGCAACGGCGAGCGATGAATGTCATTCTAAATTTTGTTGGAATGTTAAAACTTATTGTGGTGTTCTTTGTGCCTGATGCAATTCTAGAAACTTGCTTGCTTCTGATGGAGAAGAACCAGCCTGTTTTTGTCAAAGATGCTGTTTTGAAATTGCAATTGGCCCTCCTTGATGGCATCCAAAGAGAAGACCAGCTGTTTGCAGCTGGATCTGTGATATCAAAGAGTGACTATGAAGATGTTGTAACTGAAGGTCCATCACTAATTTGTGTGGGTTTTTCTGACTTGAAAATCCAGGATAAAACAGAAACCGGCACTGGGGAGGTGTCTTTGGAACAGTGGGCTGGACCATCAAATGCAATTGAGGGTTATGTACCAAAACAAAGAGACAATGATTCTAAGGCTTCTAAGAAAAATGCTAAAAAAGAAAGAGAATGTGATGCAGAACAGAATGATTCTGAAAGGAAATCGATACAACTCAAGGAGGAAAATAGTATAGTTGCTGCTAACGATGATGCTTCCACTTCCAATTTAAATTCTGCCAATGTTGAAGAGAAATTCCTAATTGAAAAAGCAATTGAATCATGCCATACTAAACCAAAATCTTCTCTTAAATCTAACGGTAAAAAGAAACTCAGTCGCTCTGTTACTTGGGCTGATGAGAAAATCAACAGTTCTGGGAGTAAAGATCTTTGTGCAGTGAAAGAATTTGGAAACATTAAAAAGGAGTCTGGTGTGGCTGATAACGTAGATTCTGCTGATGAAGATATGTTACGTTGCACATTAGCAGAAGCTTGTGCAATTGCCTTGAGCCAAGCATCAGAAGCAGTGCTTCTGGAGACTCGGATCCCAATGATGCTGGTACGCTTGCTGGATACAATGTCGTTTGTGGAAGCACTACCAGCATTCAGAATGAAACAGTGGCAAGTGGTTGTTCTCTTGATCATTGATGCATTGTCTGTTTCTAGAGTGCCTACTCTTATCTCATACATGACGGACAGGAGGGACTTGTTTCTCAAGGTTCTGAGTGGTTCACAAATAGGCAAGGAAGAGTATGACGTTTTGAAGGATTTCATTGTACCACTTGGCGAGCACCTCATTTCGCTTCTCAAAGTGGAGCTTGAAAACATTGAATTTCCATCATAA

Protein sequence

>MsG0180003167.01.T01

MASAIARNGEQNVLSGTPKRVTRNGELLCSQLRAVLGYSQRECVLARNCERFGVTCNCECCYSQRRAMNVILNFVGMLKLIVVFFVPDAILETCLLLMEKNQPVFVKDAVLKLQLALLDGIQREDQLFAAGSVISKSDYEDVVTEGPSLICVGFSDLKIQDKTETGTGEVSLEQWAGPSNAIEGYVPKQRDNDSKASKKNAKKERECDAEQNDSERKSIQLKEENSIVAANDDASTSNLNSANVEEKFLIEKAIESCHTKPKSSLKSNGKKKLSRSVTWADEKINSSGSKDLCAVKEFGNIKKESGVADNVDSADEDMLRCTLAEACAIALSQASEAVLLETRIPMMLVRLLDTMSFVEALPAFRMKQWQVVVLLIIDALSVSRVPTLISYMTDRRDLFLKVLSGSQIGKEEYDVLKDFIVPLGEHLISLLKVELENIEFPS*