AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023735.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023735.01.T01 MTR_8g100135 84.422 199 26 1 102 295 281 479 4.56e-119 350
MsG0480023735.01.T01 MTR_8g100135 96.212 132 5 0 1 132 67 198 8.88e-85 263
MsG0480023735.01.T01 MTR_8g100135 96.212 132 5 0 1 132 67 198 2.64e-86 264
MsG0480023735.01.T01 MTR_8g100135 68.317 101 27 1 102 197 281 381 8.65e-38 138
MsG0480023735.01.T01 MTR_8g089190 56.209 153 65 2 141 291 290 442 1.29e-56 189
MsG0480023735.01.T01 MTR_8g089190 38.406 138 73 4 2 131 31 164 3.42e-20 90.5
MsG0480023735.01.T01 MTR_5g091760 50.000 162 80 1 131 292 316 476 3.78e-52 178
MsG0480023735.01.T01 MTR_5g091760 30.894 123 83 1 6 126 76 198 3.46e-11 63.9
MsG0480023735.01.T01 MTR_5g092150 49.091 165 82 2 131 294 309 472 8.80e-50 171
MsG0480023735.01.T01 MTR_5g092150 34.188 117 77 0 10 126 70 186 2.84e-15 76.3
MsG0480023735.01.T01 MTR_3g467140 43.094 181 100 2 116 293 164 344 2.95e-48 164
MsG0480023735.01.T01 MTR_3g467140 43.094 181 100 2 116 293 297 477 4.04e-47 164
MsG0480023735.01.T01 MTR_3g467140 26.016 123 91 0 8 130 72 194 2.03e-11 64.7
MsG0480023735.01.T01 MTR_3g467130 41.989 181 102 2 116 293 297 477 9.94e-47 163
MsG0480023735.01.T01 MTR_3g467130 27.642 123 89 0 8 130 72 194 2.10e-11 64.7
MsG0480023735.01.T01 MTR_4g086130 40.123 162 95 2 131 291 306 466 2.98e-36 135
MsG0480023735.01.T01 MTR_8g072260 36.328 256 147 6 54 294 212 466 3.11e-36 135
MsG0480023735.01.T01 MTR_5g025610 40.000 170 97 2 125 294 300 464 3.96e-35 132
MsG0480023735.01.T01 MTR_1g019410 44.366 142 78 1 148 289 325 465 3.41e-33 127
MsG0480023735.01.T01 MTR_4g086040 36.810 163 100 3 131 291 309 470 4.30e-33 127
MsG0480023735.01.T01 MTR_6g034940 33.161 193 123 2 101 288 285 476 3.71e-30 119
MsG0480023735.01.T01 MTR_8g077810 34.884 215 120 7 85 290 274 477 2.12e-29 117
MsG0480023735.01.T01 MTR_5g020020 33.023 215 127 6 85 293 203 406 3.80e-29 115
MsG0480023735.01.T01 MTR_8g072260 35.841 226 129 6 54 264 212 436 8.18e-29 114
MsG0480023735.01.T01 MTR_5g020020 33.023 215 127 6 85 293 277 480 8.32e-29 115
MsG0480023735.01.T01 MTR_5g025610 39.583 144 82 2 125 268 300 438 1.78e-28 113
MsG0480023735.01.T01 MTR_1g037580 39.752 161 95 2 131 290 314 473 1.20e-27 112
MsG0480023735.01.T01 MTR_7g033040 36.424 151 90 1 124 274 308 452 2.50e-27 110
MsG0480023735.01.T01 MTR_5g082520 37.931 145 84 3 148 288 318 460 1.03e-26 109
MsG0480023735.01.T01 MTR_8g089800 37.681 138 85 1 135 271 330 467 1.21e-26 109
MsG0480023735.01.T01 MTR_5g021220 36.810 163 94 4 135 292 330 488 1.44e-26 108
MsG0480023735.01.T01 MTR_5g014250 33.121 157 104 1 135 290 331 487 1.50e-26 108
MsG0480023735.01.T01 MTR_5g014240 34.395 157 102 1 135 290 330 486 4.55e-26 107
MsG0480023735.01.T01 MTR_8g012970 35.526 152 96 2 135 285 328 478 1.56e-25 105
MsG0480023735.01.T01 MTR_8g076510 35.000 160 100 2 131 288 316 473 1.22e-24 103
MsG0480023735.01.T01 MTR_3g112120 34.254 181 113 2 99 274 285 464 1.25e-24 103
MsG0480023735.01.T01 MTR_8g076940 36.232 138 87 1 128 265 320 456 1.98e-24 102
MsG0480023735.01.T01 MTR_2g031920 35.000 160 89 2 135 293 328 473 3.97e-24 102
MsG0480023735.01.T01 MTR_8g016180 35.537 121 78 0 145 265 326 446 5.63e-24 101
MsG0480023735.01.T01 MTR_4g005230 35.526 152 96 2 135 285 326 476 6.10e-24 101
MsG0480023735.01.T01 MTR_3g070380 36.306 157 89 4 139 288 311 463 1.30e-23 100
MsG0480023735.01.T01 MTR_2g031930 34.375 160 89 3 135 293 330 474 1.99e-23 100
MsG0480023735.01.T01 MTR_6g015910 35.252 139 89 1 135 272 306 444 6.76e-23 98.2
MsG0480023735.01.T01 MTR_0045s0060 34.532 139 88 2 152 289 255 391 7.50e-23 97.4
MsG0480023735.01.T01 MTR_2g031930 37.405 131 80 2 135 264 326 455 3.24e-22 96.3
MsG0480023735.01.T01 MTR_0045s0060 34.286 140 89 2 152 290 337 474 3.76e-22 96.3
MsG0480023735.01.T01 MTR_7g016040 34.722 144 92 2 148 290 318 460 1.03e-21 94.7
MsG0480023735.01.T01 MTR_3g007320 34.815 135 87 1 135 268 306 440 1.08e-21 94.7
MsG0480023735.01.T01 MTR_1g032950 32.237 152 102 1 135 285 315 466 2.45e-21 94.0
MsG0480023735.01.T01 MTR_5g010750 34.146 123 79 1 148 268 324 446 3.51e-21 93.6
MsG0480023735.01.T01 MTR_8g089190 37.681 138 74 3 2 131 31 164 2.02e-20 90.1
MsG0480023735.01.T01 MTR_8g089190 56.897 58 24 1 141 197 290 347 1.70e-14 73.2
MsG0480023735.01.T01 MTR_5g010750 34.454 119 76 1 148 264 324 442 6.59e-20 89.7
MsG0480023735.01.T01 MTR_0045s0070 32.192 146 96 2 145 289 330 473 1.55e-19 88.6
MsG0480023735.01.T01 MTR_1g062190 27.551 196 131 5 88 274 325 518 4.90e-16 78.6
MsG0480023735.01.T01 MTR_7g079440 32.000 125 79 1 151 269 498 622 7.74e-16 78.2
MsG0480023735.01.T01 MTR_4g071710 29.936 157 102 2 135 283 344 500 1.36e-15 77.0
MsG0480023735.01.T01 MTR_0045s0070 33.884 121 77 2 145 264 330 448 6.58e-15 75.1
MsG0480023735.01.T01 MTR_6g069000 32.576 132 82 1 140 264 331 462 1.15e-14 74.3
MsG0480023735.01.T01 MTR_6g069000 32.576 132 82 1 140 264 321 452 1.17e-14 74.3
MsG0480023735.01.T01 MTR_5g025610 38.384 99 57 1 125 223 300 394 1.74e-14 73.6
MsG0480023735.01.T01 MTR_8g072260 43.750 96 51 2 131 223 301 396 1.84e-14 73.6
MsG0480023735.01.T01 MTR_5g072980 33.577 137 86 2 135 266 333 469 4.33e-14 72.8
MsG0480023735.01.T01 MTR_5g072930 33.577 137 86 2 135 266 333 469 4.33e-14 72.8
MsG0480023735.01.T01 MTR_4g025970 31.081 148 95 3 135 277 328 473 8.19e-14 71.6
MsG0480023735.01.T01 MTR_8g008530 32.090 134 86 2 137 265 357 490 1.17e-13 71.2
MsG0480023735.01.T01 MTR_5g014230 35.294 85 55 0 207 291 2 86 2.41e-13 65.5
MsG0480023735.01.T01 MTR_5g073020 31.613 155 95 4 135 280 333 485 2.70e-13 70.1
MsG0480023735.01.T01 MTR_5g021390 28.324 173 113 3 119 283 331 500 4.90e-13 69.3
MsG0480023735.01.T01 MTR_4g025940 30.556 144 89 4 135 271 5 144 5.98e-13 66.2
MsG0480023735.01.T01 MTR_5g095290 29.927 137 92 1 134 266 331 467 8.27e-13 68.9
MsG0480023735.01.T01 MTR_7g012330 31.387 137 88 2 134 266 332 466 9.64e-13 68.6
MsG0480023735.01.T01 MTR_4g077210 34.507 142 88 3 137 274 336 476 1.11e-12 68.6
MsG0480023735.01.T01 MTR_2g072400 30.081 123 81 2 149 266 366 488 1.93e-12 67.8
MsG0480023735.01.T01 MTR_8g063280 30.303 132 84 2 151 274 344 475 2.85e-12 67.0
MsG0480023735.01.T01 MTR_7g012860 28.467 137 94 1 134 266 331 467 3.02e-12 67.0
MsG0480023735.01.T01 MTR_0287s0060 28.467 137 94 1 134 266 331 467 3.02e-12 67.0
MsG0480023735.01.T01 MTR_4g104660 33.058 121 76 2 151 266 360 480 4.28e-12 66.6
MsG0480023735.01.T01 MTR_5g034900 32.558 129 80 2 151 272 365 493 8.94e-12 65.9
MsG0480023735.01.T01 MTR_8g006450 29.412 136 86 2 145 270 324 459 1.46e-11 65.1
MsG0480023735.01.T01 MTR_8g006495 29.412 136 86 2 145 270 211 346 1.52e-11 64.7
MsG0480023735.01.T01 MTR_3g104560 34.483 116 67 3 155 263 255 368 2.31e-11 64.3
MsG0480023735.01.T01 MTR_5g095260 29.197 137 93 1 134 266 332 468 2.41e-11 64.3
MsG0480023735.01.T01 MTR_2g010380 31.707 123 77 2 151 266 357 479 2.61e-11 64.3
MsG0480023735.01.T01 MTR_8g076940 33.333 96 64 0 128 223 320 415 2.68e-11 63.9
MsG0480023735.01.T01 MTR_3g104560 34.483 116 67 3 155 263 390 503 3.65e-11 63.9
MsG0480023735.01.T01 MTR_1g031700 27.059 170 115 4 134 294 327 496 4.43e-11 63.5
MsG0480023735.01.T01 MTR_2g073440 26.744 172 114 4 125 290 301 466 4.50e-11 63.5
MsG0480023735.01.T01 MTR_2g073480 25.731 171 117 3 125 290 234 399 4.61e-11 63.2
MsG0480023735.01.T01 MTR_3g057900 34.127 126 73 3 149 266 341 464 4.85e-11 63.5
MsG0480023735.01.T01 MTR_1g103670 26.786 168 114 4 134 292 327 494 7.52e-11 62.8
MsG0480023735.01.T01 MTR_4g057645 31.068 103 64 2 169 266 1 101 9.61e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023735.01.T01 AT5G36110 73.469 147 38 1 148 293 330 476 1.32e-77 244
MsG0480023735.01.T01 AT5G36110 60.484 124 48 1 8 131 77 199 3.88e-45 159
MsG0480023735.01.T01 AT5G36130 74.820 139 34 1 156 293 1 139 4.93e-75 226
MsG0480023735.01.T01 AT2G42850 40.000 245 118 6 51 292 264 482 1.01e-51 177
MsG0480023735.01.T01 AT5G36140 57.252 131 55 1 1 131 66 195 4.94e-46 158
MsG0480023735.01.T01 AT5G36110 60.484 124 48 1 8 131 77 199 5.47e-46 159
MsG0480023735.01.T01 AT5G36110 65.455 55 19 0 148 202 330 384 2.61e-18 84.7
MsG0480023735.01.T01 AT2G29090 43.030 165 92 2 129 292 223 386 6.86e-41 146
MsG0480023735.01.T01 AT2G29090 43.030 165 92 2 129 292 318 481 9.71e-40 145
MsG0480023735.01.T01 AT2G29090 43.030 165 92 2 129 292 318 481 9.71e-40 145
MsG0480023735.01.T01 AT5G45340 45.000 160 87 1 131 290 301 459 2.03e-39 144
MsG0480023735.01.T01 AT4G19230 42.500 160 91 1 131 290 301 459 4.87e-36 134
MsG0480023735.01.T01 AT3G19270 42.466 146 83 1 148 293 322 466 2.48e-33 127
MsG0480023735.01.T01 AT5G45340 45.522 134 72 1 131 264 301 433 3.31e-32 124
MsG0480023735.01.T01 AT4G19230 41.727 139 80 1 131 269 301 438 1.81e-30 119
MsG0480023735.01.T01 AT3G19270 43.220 118 66 1 148 265 322 438 1.99e-27 110
MsG0480023735.01.T01 AT3G50660 31.818 220 125 5 85 290 301 509 3.35e-27 110
MsG0480023735.01.T01 AT5G05690 39.456 147 79 4 148 288 202 344 1.36e-26 107
MsG0480023735.01.T01 AT4G36380 34.146 164 102 3 131 290 348 509 3.21e-26 108
MsG0480023735.01.T01 AT2G32440 34.615 156 102 0 135 290 329 484 3.57e-26 107
MsG0480023735.01.T01 AT2G32440 34.615 156 102 0 135 290 329 484 3.57e-26 107
MsG0480023735.01.T01 AT5G05690 39.456 147 79 4 148 288 321 463 1.10e-25 106
MsG0480023735.01.T01 AT1G05160 35.443 158 100 2 135 290 330 487 1.72e-24 103
MsG0480023735.01.T01 AT1G05160 35.443 158 100 2 135 290 330 487 1.72e-24 103
MsG0480023735.01.T01 AT3G13730 37.956 137 81 2 144 280 344 476 3.54e-24 102
MsG0480023735.01.T01 AT5G38970 32.500 160 106 2 135 293 226 384 3.57e-22 95.5
MsG0480023735.01.T01 AT5G38970 32.500 160 106 2 135 293 226 384 3.57e-22 95.5
MsG0480023735.01.T01 AT3G13730 38.017 121 75 0 144 264 344 464 3.85e-22 96.3
MsG0480023735.01.T01 AT5G38970 32.500 160 106 2 135 293 307 465 1.13e-21 94.7
MsG0480023735.01.T01 AT1G12740 34.146 123 79 1 148 268 324 446 9.15e-21 92.4
MsG0480023735.01.T01 AT1G12740 33.858 127 82 1 144 268 326 452 9.19e-21 92.4
MsG0480023735.01.T01 AT3G30180 34.483 145 93 2 135 278 307 450 1.86e-20 91.3
MsG0480023735.01.T01 AT1G78490 33.117 154 97 4 140 290 323 473 9.00e-20 89.4
MsG0480023735.01.T01 AT1G12740 33.333 129 78 2 148 268 324 452 8.02e-19 86.7
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 303 473 1.22e-18 86.3
MsG0480023735.01.T01 AT5G48000 29.651 172 111 4 128 290 344 514 1.58e-18 85.9
MsG0480023735.01.T01 AT5G14400 29.843 191 103 4 104 294 204 363 1.91e-18 84.7
MsG0480023735.01.T01 AT5G14400 29.843 191 103 4 104 294 258 417 2.34e-18 85.1
MsG0480023735.01.T01 AT1G55940 32.192 146 93 4 148 290 345 487 2.45e-17 82.4
MsG0480023735.01.T01 AT1G19630 29.834 181 121 2 99 274 276 455 2.56e-17 82.4
MsG0480023735.01.T01 AT1G55940 33.613 119 76 2 148 263 345 463 3.93e-17 81.6
MsG0480023735.01.T01 AT4G15396 32.231 121 77 3 148 265 326 444 2.69e-16 79.3
MsG0480023735.01.T01 AT2G42850 34.000 150 71 5 51 197 264 388 2.82e-16 79.0
MsG0480023735.01.T01 AT4G15300 33.835 133 82 4 137 265 325 455 3.08e-16 79.0
MsG0480023735.01.T01 AT4G15300 33.835 133 82 4 137 265 313 443 3.66e-16 79.0
MsG0480023735.01.T01 AT4G15300 33.835 133 82 4 137 265 303 433 4.27e-16 78.6
MsG0480023735.01.T01 AT4G15393 27.570 214 144 6 59 265 233 442 7.67e-16 77.8
MsG0480023735.01.T01 AT5G14400 30.247 162 83 3 104 265 258 389 1.15e-15 77.0
MsG0480023735.01.T01 AT3G44970 33.083 133 84 3 136 265 319 449 1.30e-15 77.0
MsG0480023735.01.T01 AT1G73340 30.612 147 95 1 132 271 313 459 1.55e-15 77.0
MsG0480023735.01.T01 AT3G53130 26.531 196 133 5 88 274 325 518 2.37e-15 76.6
MsG0480023735.01.T01 AT4G15396 31.624 117 76 2 148 261 326 441 3.26e-15 75.9
MsG0480023735.01.T01 AT1G31800 27.273 187 127 3 88 266 355 540 7.01e-15 75.1
MsG0480023735.01.T01 AT1G19630 28.000 175 120 2 99 268 276 449 8.68e-15 74.7
MsG0480023735.01.T01 AT3G30290 32.558 129 80 4 140 265 249 373 2.32e-14 73.2
MsG0480023735.01.T01 AT1G65670 30.579 121 79 3 148 265 321 439 1.50e-13 70.9
MsG0480023735.01.T01 AT3G28740 30.147 136 93 2 134 268 334 468 2.13e-13 70.5
MsG0480023735.01.T01 AT2G26170 37.008 127 67 5 155 270 292 416 5.77e-13 69.3
MsG0480023735.01.T01 AT5G57220 31.387 137 90 3 134 268 321 455 8.22e-13 68.9
MsG0480023735.01.T01 AT2G26170 36.641 131 70 5 151 270 371 499 8.87e-13 68.9
MsG0480023735.01.T01 AT4G37330 30.216 139 95 2 134 271 323 460 1.17e-12 68.6
MsG0480023735.01.T01 AT3G25180 29.286 140 94 2 134 268 339 478 1.25e-12 68.2
MsG0480023735.01.T01 AT4G37360 29.605 152 102 3 137 287 329 476 1.44e-12 68.2
MsG0480023735.01.T01 AT4G37430 29.371 143 97 3 134 272 326 468 2.83e-12 67.4
MsG0480023735.01.T01 AT4G13290 29.605 152 89 5 135 274 320 465 3.82e-12 67.0
MsG0480023735.01.T01 AT2G28860 30.882 136 87 3 141 271 331 464 4.44e-12 66.6
MsG0480023735.01.T01 AT4G13310 29.801 151 96 4 135 277 327 475 4.46e-12 66.6
MsG0480023735.01.T01 AT4G37370 29.323 133 92 2 137 268 328 459 1.24e-11 65.5
MsG0480023735.01.T01 AT4G37400 28.873 142 93 3 134 268 321 461 1.36e-11 65.1
MsG0480023735.01.T01 AT5G24910 33.333 120 75 3 151 265 384 503 2.05e-11 64.7
MsG0480023735.01.T01 AT1G64930 28.800 125 81 2 152 268 356 480 2.08e-11 64.7
MsG0480023735.01.T01 AT3G50660 29.078 141 88 3 85 223 301 431 2.26e-11 64.3
MsG0480023735.01.T01 AT5G24900 31.159 138 85 4 151 278 262 399 2.74e-11 63.9
MsG0480023735.01.T01 AT1G11680 28.082 146 87 3 145 280 326 463 2.84e-11 64.3
MsG0480023735.01.T01 AT5G24900 33.071 127 75 4 162 278 390 516 3.73e-11 63.9
MsG0480023735.01.T01 AT2G12190 27.941 136 90 2 152 279 357 492 8.84e-11 62.8

Find 112 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGGCTTTCACCTATTAT+TGG 0.180925 4:+89177652 None:intergenic
ATTTATATGTGTAGCTTTAT+TGG 0.183186 4:-89172417 MsG0480023735.01.T01:intron
AAATTTGCCACCAGGTAAAA+TGG 0.191783 4:-89177680 MsG0480023735.01.T01:five_prime_UTR
CTCCACTCCAAGGAGGTTTC+AGG 0.207186 4:-89172602 MsG0480023735.01.T01:CDS
TTACCTGGTGGCAAATTTAA+TGG 0.222647 4:+89177685 None:intergenic
CTGGTCTTCTAAAACATCTT+TGG 0.242258 4:+89171945 None:intergenic
GTTTGGATGCCGCAATTTAT+AGG 0.250914 4:+89177892 None:intergenic
CAATTTATAGGCATAATGTT+AGG 0.298018 4:+89177904 None:intergenic
AATACAGGAAGAGAAATATT+TGG 0.300794 4:+89172036 None:intergenic
AAGAAATCAATCATTCAGTA+TGG 0.302864 4:+89171858 None:intergenic
GAAGTTTGATTGGTTTCATT+TGG 0.303846 4:-89171806 MsG0480023735.01.T01:three_prime_UTR
CCATTTCCTTCAAATCTTGT+TGG 0.308493 4:+89172337 None:intergenic
CAAGGCTTTCACCTATTATT+GGG 0.313035 4:+89177653 None:intergenic
TGCCGTACAGTAATTGATAT+TGG 0.320886 4:-89177972 MsG0480023735.01.T01:five_prime_UTR
TTTAAGCTTTGTGTGGATAA+AGG 0.325283 4:+89172125 None:intergenic
CATTTCCTTCAAATCTTGTT+GGG 0.327422 4:+89172338 None:intergenic
CAGCAGGAGAATTGTTGAAT+TGG 0.334479 4:-89172686 MsG0480023735.01.T01:CDS
CTTGTTGGGTCAAATTTCTC+TGG 0.350406 4:+89172352 None:intergenic
AAAGACACTTTGTTTCTCAT+TGG 0.353365 4:-89177307 MsG0480023735.01.T01:CDS
AAAATGGGTTACCCAATAAT+AGG 0.354591 4:-89177664 MsG0480023735.01.T01:five_prime_UTR
CCAAATGGCACAAAAGTATA+AGG 0.354997 4:+89172307 None:intergenic
CACATAACGTTGTAGAGCTT+CGG 0.362346 4:+89177352 None:intergenic
ATCACTGACTTTATGTTCAA+TGG 0.364510 4:-89172573 MsG0480023735.01.T01:CDS
AGCCTTGAGTTCTTATCAAC+TGG 0.364680 4:-89177637 MsG0480023735.01.T01:five_prime_UTR
GGGAGATCCTTTGCAGGGAT+GGG 0.372416 4:+89172154 None:intergenic
TTGGACTGCGTGTCCATGTT+TGG 0.390472 4:+89177875 None:intergenic
TTTGACCCAACAAGATTTGA+AGG 0.391588 4:-89172343 MsG0480023735.01.T01:CDS
AAGACACTTTGTTTCTCATT+GGG 0.393050 4:-89177306 MsG0480023735.01.T01:CDS
CCAACAAGATTTGAAGGAAA+TGG 0.393625 4:-89172337 MsG0480023735.01.T01:CDS
TTCTCTTGACTCTAGCTTGA+AGG 0.396372 4:-89177420 MsG0480023735.01.T01:CDS
CAAACGACAAGCTAACAAAA+AGG 0.399058 4:+89176795 None:intergenic
AACCGAATCTGAAGTTTGAT+TGG 0.403480 4:-89171816 MsG0480023735.01.T01:three_prime_UTR
CGAATTGGGAGATCCTTTGC+AGG 0.407892 4:+89172148 None:intergenic
TTGTGTGGATAAAGGCGAAT+TGG 0.408235 4:+89172133 None:intergenic
CAATTCAACAATTCTCCTGC+TGG 0.410007 4:+89172687 None:intergenic
TCAACAATAATCTTCTCATC+TGG 0.415793 4:+89172184 None:intergenic
AGCAGGAGAATTGTTGAATT+GGG 0.421810 4:-89172685 MsG0480023735.01.T01:CDS
TGGGAGATCCTTTGCAGGGA+TGG 0.425546 4:+89172153 None:intergenic
CTAGAGTCAAGAGAAGTAGT+AGG 0.430083 4:+89177428 None:intergenic
ATTTGGCTTGTGCAAGTTGT+GGG 0.433946 4:-89172092 MsG0480023735.01.T01:three_prime_UTR
TCATGCACAATTTAGTGAAA+AGG 0.434920 4:-89172228 MsG0480023735.01.T01:CDS
CAATGGCTTCTCAATTCCTA+AGG 0.438143 4:-89172556 MsG0480023735.01.T01:CDS
AACCAATCAAACTTCAGATT+CGG 0.441833 4:+89171814 None:intergenic
TGTGTGGATAAAGGCGAATT+GGG 0.442584 4:+89172134 None:intergenic
AATTTATAGGCATAATGTTA+GGG 0.449706 4:+89177905 None:intergenic
TCAAGAAAATGAAATACTCT+TGG 0.452559 4:-89172656 MsG0480023735.01.T01:CDS
TGGGTCAAATTTCTCTGGCA+TGG 0.457169 4:+89172357 None:intergenic
ACATAACGTTGTAGAGCTTC+GGG 0.459836 4:+89177353 None:intergenic
AATTTGCCACCAGGTAAAAT+GGG 0.460791 4:-89177679 MsG0480023735.01.T01:five_prime_UTR
CAAAGAGAAGGAGAAGGGAG+AGG 0.469658 4:+89177757 None:intergenic
ATTTAGTGAAAAGGTTTAAG+TGG 0.469950 4:-89172219 MsG0480023735.01.T01:CDS
TGGCTTCCCTGAAACCTCCT+TGG 0.470918 4:+89172595 None:intergenic
TTTAGTGAAAAGGTTTAAGT+GGG 0.478571 4:-89172218 MsG0480023735.01.T01:CDS
TCCTTTGCAGGGATGGGGAA+TGG 0.480520 4:+89172160 None:intergenic
TTAATTACCTTCCATCCCTT+AGG 0.481881 4:+89172540 None:intergenic
GGAGATCCTTTGCAGGGATG+GGG 0.484284 4:+89172155 None:intergenic
TCCACTCCAAGGAGGTTTCA+GGG 0.488222 4:-89172601 MsG0480023735.01.T01:CDS
AGAGACAAAGAGAAGGAGAA+GGG 0.490883 4:+89177752 None:intergenic
AATTTGGCTTGTGCAAGTTG+TGG 0.499633 4:-89172093 MsG0480023735.01.T01:three_prime_UTR
GGGTCAAATTTCTCTGGCAT+GGG 0.502359 4:+89172358 None:intergenic
TACAATGGTGCAATGGCAGT+TGG 0.502785 4:+89177856 None:intergenic
ATCCTTGGTCCTCCACCAAA+TGG 0.503860 4:+89172292 None:intergenic
GCTTCGGGTTTAAAGAATTG+AGG 0.506044 4:+89177368 None:intergenic
GAAAAGGTTTAAGTGGGAAA+AGG 0.508814 4:-89172212 MsG0480023735.01.T01:CDS
CAAAGTAAAAGAACAAATAC+AGG 0.510957 4:+89172021 None:intergenic
GAATCTACGGTGGTTTGTTG+TGG 0.515913 4:-89177533 MsG0480023735.01.T01:CDS
TGAAACCTCCTTGGAGTGGA+GGG 0.516382 4:+89172604 None:intergenic
AAGAGACAAAGAGAAGGAGA+AGG 0.518046 4:+89177751 None:intergenic
TTCTTATCAACTGGATGGAA+AGG 0.523515 4:-89177628 MsG0480023735.01.T01:five_prime_UTR
AAATGAAAGAGACAAAGAGA+AGG 0.531102 4:+89177745 None:intergenic
CTCAATTCCTAAGGGATGGA+AGG 0.533431 4:-89172547 MsG0480023735.01.T01:intron
ATCAATCGTAGGAGAATCTA+CGG 0.534642 4:-89177546 MsG0480023735.01.T01:CDS
CGGAGGAATATTTACGCATA+CGG 0.539451 4:+89177582 None:intergenic
TTGAGTTCTTATCAACTGGA+TGG 0.540450 4:-89177633 MsG0480023735.01.T01:five_prime_UTR
CTGAAACCTCCTTGGAGTGG+AGG 0.543395 4:+89172603 None:intergenic
TAGAGTCAAGAGAAGTAGTA+GGG 0.548147 4:+89177429 None:intergenic
GCTTCTCAATTCCTAAGGGA+TGG 0.548330 4:-89172551 MsG0480023735.01.T01:CDS
TCCCTGAAACCTCCTTGGAG+TGG 0.550574 4:+89172600 None:intergenic
GGCACAAAAGTATAAGGAGC+TGG 0.558481 4:+89172313 None:intergenic
AAATTCTCTTTAGCTTACAA+TGG 0.560199 4:+89177841 None:intergenic
AGAAATTGACCTCTTGGCCA+AGG 0.560240 4:+89177256 None:intergenic
CGAAGCTCTACAACGTTATG+TGG 0.560307 4:-89177351 MsG0480023735.01.T01:CDS
AACATTATGCCTATAAATTG+CGG 0.560921 4:-89177901 MsG0480023735.01.T01:five_prime_UTR
AGAAATCAATCATTCAGTAT+GGG 0.562845 4:+89171859 None:intergenic
ACAACGTTATGTGGTGGTCA+TGG 0.563847 4:-89177342 MsG0480023735.01.T01:CDS
CCTCTTGGCCAAGGGGTAGA+CGG 0.569551 4:+89177265 None:intergenic
TGAAATCACCGTCTACCCCT+TGG 0.570162 4:-89177273 MsG0480023735.01.T01:CDS
TGCCAATATCAATTACTGTA+CGG 0.574875 4:+89177970 None:intergenic
TAAATTGCGGCATCCAAACA+TGG 0.575465 4:-89177888 MsG0480023735.01.T01:five_prime_UTR
TCCATTCCCCATCCCTGCAA+AGG 0.577603 4:-89172161 MsG0480023735.01.T01:CDS
ATTGCAAAATCGAAACCAGC+AGG 0.580297 4:-89172702 MsG0480023735.01.T01:CDS
GAAATTGACCTCTTGGCCAA+GGG 0.585160 4:+89177257 None:intergenic
ATCCAGTTGATAAGAACTCA+AGG 0.588872 4:+89177635 None:intergenic
AGACTTTCCCCTCCACTCCA+AGG 0.589332 4:-89172612 MsG0480023735.01.T01:CDS
TCTCCATTAAATTTGCCACC+AGG 0.598181 4:-89177688 MsG0480023735.01.T01:five_prime_UTR
AATGGCTTCTCAATTCCTAA+GGG 0.600833 4:-89172555 MsG0480023735.01.T01:CDS
GGAGGACCAAGGATGTGCCC+TGG 0.603367 4:-89172283 MsG0480023735.01.T01:CDS
TTTAGCTTACAATGGTGCAA+TGG 0.603712 4:+89177849 None:intergenic
CCGTCTACCCCTTGGCCAAG+AGG 0.605112 4:-89177265 MsG0480023735.01.T01:intron
GAAACCTCCTTGGAGTGGAG+GGG 0.607503 4:+89172605 None:intergenic
ATTGAACATAAAGTCAGTGA+TGG 0.611283 4:+89172575 None:intergenic
CTTTCCCCTCCACTCCAAGG+AGG 0.633438 4:-89172609 MsG0480023735.01.T01:CDS
GAATTGGGAGATCCTTTGCA+GGG 0.633506 4:+89172149 None:intergenic
TGCCATTTGGTGGAGGACCA+AGG 0.636114 4:-89172294 MsG0480023735.01.T01:CDS
ATTTATAGGCATAATGTTAG+GGG 0.637730 4:+89177906 None:intergenic
CTCTTTAAAACATCAATCGT+AGG 0.639207 4:-89177557 MsG0480023735.01.T01:CDS
TTTATAGGCATAATGTTAGG+GGG 0.651002 4:+89177907 None:intergenic
AGCTCTACAACGTTATGTGG+TGG 0.653383 4:-89177348 MsG0480023735.01.T01:CDS
AGAACAAACTTGTGACTGCA+TGG 0.653750 4:-89177478 MsG0480023735.01.T01:CDS
AAATTGACCTCTTGGCCAAG+GGG 0.660874 4:+89177258 None:intergenic
AATCGTAGGAGAATCTACGG+TGG 0.773902 4:-89177543 MsG0480023735.01.T01:CDS
ACAAACTTGTGACTGCATGG+TGG 0.792291 4:-89177475 MsG0480023735.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAATTCTAACTAAT+AGG - Chr4:89176718-89176737 MsG0480023735.01.T01:intron 10.0%
!! ATTAAGTAAATATATAGTAT+TGG - Chr4:89172624-89172643 MsG0480023735.01.T01:CDS 10.0%
!!! ATCATATTTACTTTTTTTTA+AGG + Chr4:89173750-89173769 None:intergenic 10.0%
!!! CATTTAACTATTATTTTAAA+AGG + Chr4:89176802-89176821 None:intergenic 10.0%
!!! TAGTTAGAATTAATTTTTTA+AGG + Chr4:89176716-89176735 None:intergenic 10.0%
!!! TTTTAATAGAATATTTCTTT+TGG - Chr4:89175939-89175958 MsG0480023735.01.T01:intron 10.0%
!! AAAAAAAGTAAATATGATGT+TGG - Chr4:89173752-89173771 MsG0480023735.01.T01:intron 15.0%
!! AATAAAAACGATAGTTTATA+TGG - Chr4:89176753-89176772 MsG0480023735.01.T01:intron 15.0%
!! CATTCAATTAATAATGAATA+TGG - Chr4:89174109-89174128 MsG0480023735.01.T01:intron 15.0%
!! GCTTAAAAATATATTCAATT+TGG - Chr4:89177652-89177671 MsG0480023735.01.T01:five_prime_UTR 15.0%
!! GTTTCCTTAAAAAAAAAAAT+TGG + Chr4:89176539-89176558 None:intergenic 15.0%
!! TGTAAAATCATACTATAATT+AGG - Chr4:89174322-89174341 MsG0480023735.01.T01:intron 15.0%
!! TTTAGTAGAAAAAATAGTAT+TGG - Chr4:89176001-89176020 MsG0480023735.01.T01:intron 15.0%
!!! AATAAATTCAATTTTAGACT+TGG - Chr4:89173888-89173907 MsG0480023735.01.T01:intron 15.0%
!!! AATTTTCTTTTTATCCTTTT+GGG - Chr4:89173952-89173971 MsG0480023735.01.T01:intron 15.0%
!!! ACTTTTTTAATTTAGATGAA+AGG + Chr4:89173824-89173843 None:intergenic 15.0%
!!! ATTTTACTTATAATAGTGAT+CGG - Chr4:89174181-89174200 MsG0480023735.01.T01:intron 15.0%
!!! CATATCTGAAATATTATATT+TGG - Chr4:89172665-89172684 MsG0480023735.01.T01:CDS 15.0%
!!! TAATTTTCTTTTTATCCTTT+TGG - Chr4:89173951-89173970 MsG0480023735.01.T01:intron 15.0%
!!! TATAGAAGTTATAGTTTTTT+AGG + Chr4:89176582-89176601 None:intergenic 15.0%
!!! TTATTAACTTAGTATTTTAG+AGG + Chr4:89173441-89173460 None:intergenic 15.0%
!!! TTCACCAATTTTTTTTTTTA+AGG - Chr4:89176532-89176551 MsG0480023735.01.T01:intron 15.0%
!! AAAAAATCTTCACAATTGAA+TGG + Chr4:89172845-89172864 None:intergenic 20.0%
!! AAATTGCTTACTAGAAAAAT+TGG + Chr4:89173865-89173884 None:intergenic 20.0%
!! AATAAGTCTTTATATTGCAA+CGG - Chr4:89173471-89173490 MsG0480023735.01.T01:intron 20.0%
!! AATTTATAGGCATAATGTTA+GGG + Chr4:89171859-89171878 None:intergenic 20.0%
!! ATTTATGATAAAGTCTATCA+CGG - Chr4:89173351-89173370 MsG0480023735.01.T01:intron 20.0%
!! CATTCATTAAATGATTTATG+TGG + Chr4:89174148-89174167 None:intergenic 20.0%
!! CCAAAATAATTTCTAATCTA+AGG - Chr4:89175604-89175623 MsG0480023735.01.T01:intron 20.0%
!! TCAACATAAATATCAATAAG+TGG - Chr4:89175146-89175165 MsG0480023735.01.T01:intron 20.0%
!! TCAGATATGAATTTAATCTT+AGG + Chr4:89172654-89172673 None:intergenic 20.0%
!! TTAAAAAAATTGTGTGTTGT+CGG - Chr4:89174935-89174954 MsG0480023735.01.T01:intron 20.0%
!!! ACGTGGATTTATTTTTAAAT+TGG + Chr4:89173924-89173943 None:intergenic 20.0%
!!! ATATATTTTTAAGCTTTGTG+TGG + Chr4:89177646-89177665 None:intergenic 20.0%
!!! ATTTATATGTGTAGCTTTAT+TGG - Chr4:89177344-89177363 MsG0480023735.01.T01:CDS 20.0%
!!! ATTTTTTTTCACAAAATACG+TGG - Chr4:89173620-89173639 MsG0480023735.01.T01:intron 20.0%
!!! CCTTAGATTAGAAATTATTT+TGG + Chr4:89175607-89175626 None:intergenic 20.0%
!!! GATTTTTATTTTTAAACCAC+TGG - Chr4:89176462-89176481 MsG0480023735.01.T01:intron 20.0%
!!! GTCAACATAATATTTAAAGT+GGG - Chr4:89174292-89174311 MsG0480023735.01.T01:intron 20.0%
!!! GTCTTTTTCATGAAAATAAA+AGG + Chr4:89175223-89175242 None:intergenic 20.0%
!!! GTTTTTTCTTTGTTTCTTTT+TGG - Chr4:89175178-89175197 MsG0480023735.01.T01:intron 20.0%
!!! TAGAGTTAGCTTTAAATATT+CGG + Chr4:89175482-89175501 None:intergenic 20.0%
!!! TCAACATAATATTTAAAGTG+GGG - Chr4:89174293-89174312 MsG0480023735.01.T01:intron 20.0%
!!! TTTTTGGTTTGAATCATATA+AGG - Chr4:89177275-89177294 MsG0480023735.01.T01:CDS 20.0%
! AAAGTATAATGTTTCTTGAG+GGG + Chr4:89176307-89176326 None:intergenic 25.0%
! AAATATTATATTTGGTCTCG+TGG - Chr4:89172673-89172692 MsG0480023735.01.T01:CDS 25.0%
! AAATTGAATGTGTAACTGTA+TGG + Chr4:89173604-89173623 None:intergenic 25.0%
! AACATTATGCCTATAAATTG+CGG - Chr4:89171860-89171879 MsG0480023735.01.T01:three_prime_UTR 25.0%
! AAGAAAATTAAGATAGTACG+TGG + Chr4:89173941-89173960 None:intergenic 25.0%
! AAGAAATCAATCATTCAGTA+TGG + Chr4:89177906-89177925 None:intergenic 25.0%
! AATACAGGAAGAGAAATATT+TGG + Chr4:89177728-89177747 None:intergenic 25.0%
! AATTTAGTCACAAAAAAGCA+TGG - Chr4:89171968-89171987 MsG0480023735.01.T01:three_prime_UTR 25.0%
! AGAAATCAATCATTCAGTAT+GGG + Chr4:89177905-89177924 None:intergenic 25.0%
! AGTTAACATTACTAAAAACG+AGG + Chr4:89173708-89173727 None:intergenic 25.0%
! ATTATAATCATAGACATGCA+CGG + Chr4:89174402-89174421 None:intergenic 25.0%
! ATTTAGTGAAAAGGTTTAAG+TGG - Chr4:89177542-89177561 MsG0480023735.01.T01:CDS 25.0%
! ATTTATAGGCATAATGTTAG+GGG + Chr4:89171858-89171877 None:intergenic 25.0%
! CAAAGTAAAAGAACAAATAC+AGG + Chr4:89177743-89177762 None:intergenic 25.0%
! CAAAGTATAATGTTTCTTGA+GGG + Chr4:89176308-89176327 None:intergenic 25.0%
! CAATTTATAGGCATAATGTT+AGG + Chr4:89171860-89171879 None:intergenic 25.0%
! GAATAATTGAAGAGAATGAA+TGG + Chr4:89172550-89172569 None:intergenic 25.0%
! GGTCAACATAATATTTAAAG+TGG - Chr4:89174291-89174310 MsG0480023735.01.T01:intron 25.0%
! GTAAAATAGAAACCAAATAG+TGG - Chr4:89174344-89174363 MsG0480023735.01.T01:intron 25.0%
! GTAATGACTATATTGTTGAA+AGG + Chr4:89173656-89173675 None:intergenic 25.0%
! GTCTATGATTATAATGCAAT+GGG - Chr4:89174407-89174426 MsG0480023735.01.T01:intron 25.0%
! TAACCAAACTAATATACTAG+AGG + Chr4:89174266-89174285 None:intergenic 25.0%
! TAGACTTTATCATAAATGTG+AGG + Chr4:89173348-89173367 None:intergenic 25.0%
! TCAAGAAAATGAAATACTCT+TGG - Chr4:89177105-89177124 MsG0480023735.01.T01:intron 25.0%
! TGTCTATGATTATAATGCAA+TGG - Chr4:89174406-89174425 MsG0480023735.01.T01:intron 25.0%
! TTAAATACTCATCAATGAGA+TGG - Chr4:89175361-89175380 MsG0480023735.01.T01:intron 25.0%
! TTACCTCTAGTATATTAGTT+TGG - Chr4:89174260-89174279 MsG0480023735.01.T01:intron 25.0%
! TTGAGTTATACTACATCATA+TGG - Chr4:89174052-89174071 MsG0480023735.01.T01:intron 25.0%
! TTGATTAATCAAAACAAAGG+AGG - Chr4:89173136-89173155 MsG0480023735.01.T01:intron 25.0%
! TTTAGTGAAAAGGTTTAAGT+GGG - Chr4:89177543-89177562 MsG0480023735.01.T01:CDS 25.0%
!! AAATTCTCTTTAGCTTACAA+TGG + Chr4:89171923-89171942 None:intergenic 25.0%
!! AGTATATTAGTTTGGTTATG+CGG - Chr4:89174268-89174287 MsG0480023735.01.T01:intron 25.0%
!! ATATTTGTAGAAGTATGTTC+TGG + Chr4:89175342-89175361 None:intergenic 25.0%
!! ATCAAAATATTTTCGTCAGT+AGG - Chr4:89174898-89174917 MsG0480023735.01.T01:intron 25.0%
!! GAGTTGATTAATCAAAACAA+AGG - Chr4:89173133-89173152 MsG0480023735.01.T01:intron 25.0%
!! TTTTCAAATCAAAGCTTAGT+TGG - Chr4:89175007-89175026 MsG0480023735.01.T01:intron 25.0%
!!! AAGAGTATTTCATTTTCTTG+AGG + Chr4:89177106-89177125 None:intergenic 25.0%
!!! AAGATTTTGTTTACACTATC+TGG + Chr4:89172312-89172331 None:intergenic 25.0%
!!! ACATTCTTTTTGGTTAAAGT+GGG + Chr4:89175775-89175794 None:intergenic 25.0%
!!! AGCATATACTATTTTAAGAC+AGG - Chr4:89175244-89175263 MsG0480023735.01.T01:intron 25.0%
!!! AGTTGTACTCATTTTGATTA+TGG - Chr4:89177863-89177882 MsG0480023735.01.T01:five_prime_UTR 25.0%
!!! CACATATATCTCTTTTTTGT+TGG - Chr4:89177245-89177264 MsG0480023735.01.T01:intron 25.0%
!!! CTATTGATTTCAAAAGCAAA+TGG - Chr4:89176960-89176979 MsG0480023735.01.T01:intron 25.0%
!!! GATTGATGTTTTAAAGAGTT+CGG + Chr4:89172202-89172221 None:intergenic 25.0%
!!! GTTATAGTTTTTTAGGTTGA+AGG + Chr4:89176575-89176594 None:intergenic 25.0%
!!! TTGTGACTGCATTATTTTTT+AGG + Chr4:89177791-89177810 None:intergenic 25.0%
!!! TTTTGTTGGTCTTTACTTTT+TGG - Chr4:89177259-89177278 MsG0480023735.01.T01:intron 25.0%
AAAACAAAGGAGGATAGATT+TGG - Chr4:89173146-89173165 MsG0480023735.01.T01:intron 30.0%
AAATGAAAGAGACAAAGAGA+AGG + Chr4:89172019-89172038 None:intergenic 30.0%
AAATGTAACCAAAGCAGAAT+TGG - Chr4:89176501-89176520 MsG0480023735.01.T01:intron 30.0%
AACCAATCAAACTTCAGATT+CGG + Chr4:89177950-89177969 None:intergenic 30.0%
AAGAAGTTTGAATGGAAGAA+TGG + Chr4:89175298-89175317 None:intergenic 30.0%
AATAAGAAAATGCTCCCAAA+AGG + Chr4:89173969-89173988 None:intergenic 30.0%
AATATTGCCGATAAGATTCT+TGG - Chr4:89173253-89173272 MsG0480023735.01.T01:intron 30.0%
ACCATTCAACAAAGCTATAA+AGG - Chr4:89173090-89173109 MsG0480023735.01.T01:intron 30.0%
ACTTTCCTTGTCAAATATCT+CGG - Chr4:89173315-89173334 MsG0480023735.01.T01:intron 30.0%
AGGAACTCAAAAAATTGCAT+TGG - Chr4:89176052-89176071 MsG0480023735.01.T01:intron 30.0%
AGTACATCATGCATAAAGTT+AGG + Chr4:89174826-89174845 None:intergenic 30.0%
ATATGAAGAAATTGACCTCT+TGG + Chr4:89172514-89172533 None:intergenic 30.0%
ATCTGGTAATCTCTGATTTA+TGG + Chr4:89173534-89173553 None:intergenic 30.0%
ATTGAACATAAAGTCAGTGA+TGG + Chr4:89177189-89177208 None:intergenic 30.0%
CAAATTAGTTCCCACAAAAA+TGG + Chr4:89177312-89177331 None:intergenic 30.0%
CAATACGTTGTTATATGTTG+TGG - Chr4:89176656-89176675 MsG0480023735.01.T01:intron 30.0%
CATTTCCTTCAAATCTTGTT+GGG + Chr4:89177426-89177445 None:intergenic 30.0%
CTCAAACTTTCTACTACAAT+TGG + Chr4:89174037-89174056 None:intergenic 30.0%
GATAGAGAGATAAATGGAAA+TGG + Chr4:89173399-89173418 None:intergenic 30.0%
GATAGAGATAGAGAGATAAA+TGG + Chr4:89173405-89173424 None:intergenic 30.0%
GATGAGAAAAGAAGTTTGAA+TGG + Chr4:89175306-89175325 None:intergenic 30.0%
GCAAAGTATAATGTTTCTTG+AGG + Chr4:89176309-89176328 None:intergenic 30.0%
GGATGTTCAATTAATATCTC+TGG - Chr4:89175960-89175979 MsG0480023735.01.T01:intron 30.0%
TAACCGAATCATATGAGATT+CGG + Chr4:89175566-89175585 None:intergenic 30.0%
TATCTCTCTATCTCTATCTT+GGG - Chr4:89173407-89173426 MsG0480023735.01.T01:intron 30.0%
TCAACAATAATCTTCTCATC+TGG + Chr4:89177580-89177599 None:intergenic 30.0%
TCAGAGATTACCAGATATAT+CGG - Chr4:89173538-89173557 MsG0480023735.01.T01:intron 30.0%
TCATGCACAATTTAGTGAAA+AGG - Chr4:89177533-89177552 MsG0480023735.01.T01:CDS 30.0%
TGAGACAATATATCTTGTGT+TGG + Chr4:89173189-89173208 None:intergenic 30.0%
TGCCAATATCAATTACTGTA+CGG + Chr4:89171794-89171813 None:intergenic 30.0%
TGTTCACGTAAATGCTATAT+CGG + Chr4:89174981-89175000 None:intergenic 30.0%
TTATCTCTCTATCTCTATCT+TGG - Chr4:89173406-89173425 MsG0480023735.01.T01:intron 30.0%
TTTAGGAAAAAGGAAGAAGT+TGG - Chr4:89175858-89175877 MsG0480023735.01.T01:intron 30.0%
TTTATAGGCATAATGTTAGG+GGG + Chr4:89171857-89171876 None:intergenic 30.0%
TTTGTCTATGCATTTGATCT+AGG - Chr4:89174492-89174511 MsG0480023735.01.T01:intron 30.0%
! AAAAGAATTGTTTCTTGAGG+AGG + Chr4:89176258-89176277 None:intergenic 30.0%
! AAAGACACTTTGTTTCTCAT+TGG - Chr4:89172454-89172473 MsG0480023735.01.T01:intron 30.0%
! AAGACACTTTGTTTCTCATT+GGG - Chr4:89172455-89172474 MsG0480023735.01.T01:intron 30.0%
! CAAAATGAGTACAACTTTTC+TGG + Chr4:89177859-89177878 None:intergenic 30.0%
! CCTAAAAGAATTGTTTCTTG+AGG + Chr4:89176261-89176280 None:intergenic 30.0%
! CCTCAAGAAACAATTCTTTT+AGG - Chr4:89176258-89176277 MsG0480023735.01.T01:intron 30.0%
! GGAAGTCACATTTTTAAATC+TGG + Chr4:89177838-89177857 None:intergenic 30.0%
! GTAAATGCTATATCGGATTT+TGG + Chr4:89174974-89174993 None:intergenic 30.0%
! GTATATTAGTTTGGTTATGC+GGG - Chr4:89174269-89174288 MsG0480023735.01.T01:intron 30.0%
! GTATTGGAGAAAGATTTTAG+AGG - Chr4:89176017-89176036 MsG0480023735.01.T01:intron 30.0%
! TATATTAGTTTGGTTATGCG+GGG - Chr4:89174270-89174289 MsG0480023735.01.T01:intron 30.0%
! TGGATCTTGTCGATTATTTA+AGG - Chr4:89176407-89176426 MsG0480023735.01.T01:intron 30.0%
! TGTATAAGTACTATCGCTTT+TGG + Chr4:89174441-89174460 None:intergenic 30.0%
! TGTCGATTATTTAAGGACTA+AGG - Chr4:89176414-89176433 MsG0480023735.01.T01:intron 30.0%
! TTTAAGCTTTGTGTGGATAA+AGG + Chr4:89177639-89177658 None:intergenic 30.0%
!! AAAATGGGTTACCCAATAAT+AGG - Chr4:89172097-89172116 MsG0480023735.01.T01:three_prime_UTR 30.0%
!! ATCACTGACTTTATGTTCAA+TGG - Chr4:89177188-89177207 MsG0480023735.01.T01:intron 30.0%
!! CTCTTTAAAACATCAATCGT+AGG - Chr4:89172204-89172223 MsG0480023735.01.T01:CDS 30.0%
!! GAAGTTTGATTGGTTTCATT+TGG - Chr4:89177955-89177974 MsG0480023735.01.T01:five_prime_UTR 30.0%
!! TTTAGAGGATACTGATTTGA+AGG - Chr4:89176032-89176051 MsG0480023735.01.T01:intron 30.0%
!!! ATCTGTACTTTTAATTTCGC+TGG + Chr4:89176923-89176942 None:intergenic 30.0%
!!! GACATTCTTTTTGGTTAAAG+TGG + Chr4:89175776-89175795 None:intergenic 30.0%
AAATTTGCCACCAGGTAAAA+TGG - Chr4:89172081-89172100 MsG0480023735.01.T01:three_prime_UTR 35.0%
AAGATTCTTGGCCTATTGAT+CGG - Chr4:89173265-89173284 MsG0480023735.01.T01:intron 35.0%
AAGCAAATGGAAATTGCAAG+TGG - Chr4:89176973-89176992 MsG0480023735.01.T01:intron 35.0%
AATGGCTTCTCAATTCCTAA+GGG - Chr4:89177206-89177225 MsG0480023735.01.T01:intron 35.0%
AATTGGTAGGGATATGATTC+CGG + Chr4:89173055-89173074 None:intergenic 35.0%
AATTTGCCACCAGGTAAAAT+GGG - Chr4:89172082-89172101 MsG0480023735.01.T01:three_prime_UTR 35.0%
ACCAAAGCAGAATTGGAATT+TGG - Chr4:89176508-89176527 MsG0480023735.01.T01:intron 35.0%
ACCAAATTCCAATTCTGCTT+TGG + Chr4:89176512-89176531 None:intergenic 35.0%
ACGTTGTTATATGTTGTGGT+TGG - Chr4:89176660-89176679 MsG0480023735.01.T01:intron 35.0%
ACTCTCACGTAAGACAAAAA+GGG + Chr4:89175087-89175106 None:intergenic 35.0%
AGCAGGAGAATTGTTGAATT+GGG - Chr4:89177076-89177095 MsG0480023735.01.T01:intron 35.0%
ATCAATCGTAGGAGAATCTA+CGG - Chr4:89172215-89172234 MsG0480023735.01.T01:CDS 35.0%
CAAAACAGAAAAGACTTGAG+GGG + Chr4:89176349-89176368 None:intergenic 35.0%
CAAACGACAAGCTAACAAAA+AGG + Chr4:89172969-89172988 None:intergenic 35.0%
CAAGGCTTTCACCTATTATT+GGG + Chr4:89172111-89172130 None:intergenic 35.0%
CAATAGGCCAAGAATCTTAT+CGG + Chr4:89173263-89173282 None:intergenic 35.0%
CATTATAGTTCAGACGTTCA+TGG - Chr4:89175637-89175656 MsG0480023735.01.T01:intron 35.0%
CCAACAAGATTTGAAGGAAA+TGG - Chr4:89177424-89177443 MsG0480023735.01.T01:CDS 35.0%
CCATTTCCTTCAAATCTTGT+TGG + Chr4:89177427-89177446 None:intergenic 35.0%
CGTTGTTATATGTTGTGGTT+GGG - Chr4:89176661-89176680 MsG0480023735.01.T01:intron 35.0%
CTCCTTTCTTATGAAGTTTG+AGG + Chr4:89173116-89173135 None:intergenic 35.0%
CTTTGGGTAATTCGCTAATT+GGG + Chr4:89174754-89174773 None:intergenic 35.0%
GAAAAGGTTTAAGTGGGAAA+AGG - Chr4:89177549-89177568 MsG0480023735.01.T01:CDS 35.0%
GACTAAGGTTTACTTAGATC+TGG - Chr4:89176387-89176406 MsG0480023735.01.T01:intron 35.0%
GCAAAACAGAAAAGACTTGA+GGG + Chr4:89176350-89176369 None:intergenic 35.0%
GCATGATGTACTATAGCTTA+GGG - Chr4:89174834-89174853 MsG0480023735.01.T01:intron 35.0%
GTCAAATACCCTAAGTACTA+TGG + Chr4:89175805-89175824 None:intergenic 35.0%
GTTGTTATATGTTGTGGTTG+GGG - Chr4:89176662-89176681 MsG0480023735.01.T01:intron 35.0%
TAGAGTCAAGAGAAGTAGTA+GGG + Chr4:89172335-89172354 None:intergenic 35.0%
TATGAAGAATGCCTCTTAAC+AGG - Chr4:89175523-89175542 MsG0480023735.01.T01:intron 35.0%
TCAAGGCTTTCACCTATTAT+TGG + Chr4:89172112-89172131 None:intergenic 35.0%
TCACCGAATCTCATATGATT+CGG - Chr4:89175560-89175579 MsG0480023735.01.T01:intron 35.0%
TCACTGATCCATAGTACTTA+GGG - Chr4:89175794-89175813 MsG0480023735.01.T01:intron 35.0%
TGACATGTGATTTGAGCTTT+GGG + Chr4:89174770-89174789 None:intergenic 35.0%
TGACTTTGTTACAAGTAGCT+TGG + Chr4:89175129-89175148 None:intergenic 35.0%
TGATCCATTCCAGTTAATTG+CGG - Chr4:89173029-89173048 MsG0480023735.01.T01:intron 35.0%
TGCAAAACAGAAAAGACTTG+AGG + Chr4:89176351-89176370 None:intergenic 35.0%
TGCATGATGTACTATAGCTT+AGG - Chr4:89174833-89174852 MsG0480023735.01.T01:intron 35.0%
TGCCGTACAGTAATTGATAT+TGG - Chr4:89171789-89171808 MsG0480023735.01.T01:three_prime_UTR 35.0%
TGCTTTGGTTACATTTGACA+GGG + Chr4:89176497-89176516 None:intergenic 35.0%
TGTCGATAATAACACTTGAC+AGG - Chr4:89172939-89172958 MsG0480023735.01.T01:intron 35.0%
TTAATTACCTTCCATCCCTT+AGG + Chr4:89177224-89177243 None:intergenic 35.0%
TTACCTGGTGGCAAATTTAA+TGG + Chr4:89172079-89172098 None:intergenic 35.0%
TTCATAGACACCGATATATC+TGG + Chr4:89173551-89173570 None:intergenic 35.0%
TTCTTATCAACTGGATGGAA+AGG - Chr4:89172133-89172152 MsG0480023735.01.T01:CDS 35.0%
TTGACATGTGATTTGAGCTT+TGG + Chr4:89174771-89174790 None:intergenic 35.0%
TTGAGTTCTTATCAACTGGA+TGG - Chr4:89172128-89172147 MsG0480023735.01.T01:CDS 35.0%
TTTGACATACTCCTGTTAAG+AGG + Chr4:89175537-89175556 None:intergenic 35.0%
TTTGACCCAACAAGATTTGA+AGG - Chr4:89177418-89177437 MsG0480023735.01.T01:CDS 35.0%
! AACCGAATCTGAAGTTTGAT+TGG - Chr4:89177945-89177964 MsG0480023735.01.T01:five_prime_UTR 35.0%
! AATCTTGCATACTCTTTTCC+AGG + Chr4:89177499-89177518 None:intergenic 35.0%
! ACGGTCGAAAATGAATTTTC+AGG + Chr4:89172163-89172182 None:intergenic 35.0%
! ATCTTGCATACTCTTTTCCA+GGG + Chr4:89177498-89177517 None:intergenic 35.0%
! CCAAATGGCACAAAAGTATA+AGG + Chr4:89177457-89177476 None:intergenic 35.0%
! GCTCTAAACATGCACAAATT+AGG + Chr4:89177031-89177050 None:intergenic 35.0%
! GTTGGTAGAAAGGTTAATCT+TGG - Chr4:89175876-89175895 MsG0480023735.01.T01:intron 35.0%
! TGGATCAGTGACATTCTTTT+TGG + Chr4:89175785-89175804 None:intergenic 35.0%
! TTGGTAATTGAGTGTGATGT+TGG + Chr4:89174796-89174815 None:intergenic 35.0%
! TTGTGCATGTTTAGAGCAAA+TGG - Chr4:89177034-89177053 MsG0480023735.01.T01:intron 35.0%
! TTTAGCTTACAATGGTGCAA+TGG + Chr4:89171915-89171934 None:intergenic 35.0%
! TTTTCTGTTTTGCACTCCAT+CGG - Chr4:89176357-89176376 MsG0480023735.01.T01:intron 35.0%
!! AAAGGAAGAAGTTGGTAGAA+AGG - Chr4:89175866-89175885 MsG0480023735.01.T01:intron 35.0%
!! ATCCAGTTGATAAGAACTCA+AGG + Chr4:89172129-89172148 None:intergenic 35.0%
!! ATGAGTGCTACCATTTTTGT+GGG - Chr4:89177299-89177318 MsG0480023735.01.T01:CDS 35.0%
!! CCTTATACTTTTGTGCCATT+TGG - Chr4:89177454-89177473 MsG0480023735.01.T01:CDS 35.0%
!! CTGGTCTTCTAAAACATCTT+TGG + Chr4:89177819-89177838 None:intergenic 35.0%
!! GCCTTTATAGCTTTGTTGAA+TGG + Chr4:89173094-89173113 None:intergenic 35.0%
!! TATGAGTGCTACCATTTTTG+TGG - Chr4:89177298-89177317 MsG0480023735.01.T01:CDS 35.0%
!!! TATACTTTTGTGCCATTTGG+TGG - Chr4:89177457-89177476 MsG0480023735.01.T01:CDS 35.0%
!!! TGATGTTTTAAAGAGTTCGG+AGG + Chr4:89172199-89172218 None:intergenic 35.0%
AAAATCGCAGACCAAACCTT+AGG + Chr4:89175828-89175847 None:intergenic 40.0%
AAATCGCAGACCAAACCTTA+GGG + Chr4:89175827-89175846 None:intergenic 40.0%
AAGAGACAAAGAGAAGGAGA+AGG + Chr4:89172013-89172032 None:intergenic 40.0%
ACATAACGTTGTAGAGCTTC+GGG + Chr4:89172411-89172430 None:intergenic 40.0%
AGAACAAACTTGTGACTGCA+TGG - Chr4:89172283-89172302 MsG0480023735.01.T01:CDS 40.0%
AGAGACAAAGAGAAGGAGAA+GGG + Chr4:89172012-89172031 None:intergenic 40.0%
AGCCTTGAGTTCTTATCAAC+TGG - Chr4:89172124-89172143 MsG0480023735.01.T01:exon 40.0%
AGGTGAATAAGTGAGATCTC+CGG + Chr4:89176696-89176715 None:intergenic 40.0%
ATTGCAAAATCGAAACCAGC+AGG - Chr4:89177059-89177078 MsG0480023735.01.T01:intron 40.0%
CAATGGCTTCTCAATTCCTA+AGG - Chr4:89177205-89177224 MsG0480023735.01.T01:intron 40.0%
CAATTCAACAATTCTCCTGC+TGG + Chr4:89177077-89177096 None:intergenic 40.0%
CACACTCAATTACCAATAGC+TGG - Chr4:89174800-89174819 MsG0480023735.01.T01:intron 40.0%
CACATAACGTTGTAGAGCTT+CGG + Chr4:89172412-89172431 None:intergenic 40.0%
CACTCTCACGTAAGACAAAA+AGG + Chr4:89175088-89175107 None:intergenic 40.0%
CAGCAGGAGAATTGTTGAAT+TGG - Chr4:89177075-89177094 MsG0480023735.01.T01:intron 40.0%
CATAAAGTTAGGCCAGCTAT+TGG + Chr4:89174815-89174834 None:intergenic 40.0%
CGGAGGAATATTTACGCATA+CGG + Chr4:89172182-89172201 None:intergenic 40.0%
CTAGAGTCAAGAGAAGTAGT+AGG + Chr4:89172336-89172355 None:intergenic 40.0%
CTGCTTTGGTTACATTTGAC+AGG + Chr4:89176498-89176517 None:intergenic 40.0%
CTTGTTGGGTCAAATTTCTC+TGG + Chr4:89177412-89177431 None:intergenic 40.0%
GACTAAGGCTTACTTAGATC+TGG - Chr4:89176429-89176448 MsG0480023735.01.T01:intron 40.0%
GGATGTAAATTCGTGCAATG+AGG + Chr4:89172895-89172914 None:intergenic 40.0%
GGCCTCAAACTTCATAAGAA+AGG - Chr4:89173111-89173130 MsG0480023735.01.T01:intron 40.0%
GTCACTGATCCATAGTACTT+AGG - Chr4:89175793-89175812 MsG0480023735.01.T01:intron 40.0%
GTTTGGATGCCGCAATTTAT+AGG + Chr4:89171872-89171891 None:intergenic 40.0%
TAAATTGCGGCATCCAAACA+TGG - Chr4:89171873-89171892 MsG0480023735.01.T01:three_prime_UTR 40.0%
TATCAGCTGAGTTATGCTCA+CGG + Chr4:89176632-89176651 None:intergenic 40.0%
TCTCCATTAAATTTGCCACC+AGG - Chr4:89172073-89172092 MsG0480023735.01.T01:three_prime_UTR 40.0%
TGAAGAGAATGAATGGTGCA+TGG + Chr4:89172543-89172562 None:intergenic 40.0%
TGAGCATAACTCAGCTGATA+GGG - Chr4:89176632-89176651 MsG0480023735.01.T01:intron 40.0%
TGTGTGGATAAAGGCGAATT+GGG + Chr4:89177630-89177649 None:intergenic 40.0%
TTGCTTGTGACATACATACG+AGG - Chr4:89172592-89172611 MsG0480023735.01.T01:CDS 40.0%
TTGTGTGGATAAAGGCGAAT+TGG + Chr4:89177631-89177650 None:intergenic 40.0%
! ACTTAGGGTATTTGACCCTA+AGG - Chr4:89175809-89175828 MsG0480023735.01.T01:intron 40.0%
! ATTGGGTAACCCATTTTACC+TGG + Chr4:89172094-89172113 None:intergenic 40.0%
! GCTTCGGGTTTAAAGAATTG+AGG + Chr4:89172396-89172415 None:intergenic 40.0%
! GCTTTGGGTAATTCGCTAAT+TGG + Chr4:89174755-89174774 None:intergenic 40.0%
! TTCTCTTGACTCTAGCTTGA+AGG - Chr4:89172341-89172360 MsG0480023735.01.T01:CDS 40.0%
!! AATTTGGCTTGTGCAAGTTG+TGG - Chr4:89177668-89177687 MsG0480023735.01.T01:five_prime_UTR 40.0%
!! ATTTGGCTTGTGCAAGTTGT+GGG - Chr4:89177669-89177688 MsG0480023735.01.T01:five_prime_UTR 40.0%
!! TAAGGTTTGGTCTGCGATTT+TGG - Chr4:89175827-89175846 MsG0480023735.01.T01:intron 40.0%
AAATTGACCTCTTGGCCAAG+GGG + Chr4:89172506-89172525 None:intergenic 45.0%
AATCGTAGGAGAATCTACGG+TGG - Chr4:89172218-89172237 MsG0480023735.01.T01:CDS 45.0%
ACAAACTTGTGACTGCATGG+TGG - Chr4:89172286-89172305 MsG0480023735.01.T01:CDS 45.0%
ACAACGTTATGTGGTGGTCA+TGG - Chr4:89172419-89172438 MsG0480023735.01.T01:intron 45.0%
AGAAATTGACCTCTTGGCCA+AGG + Chr4:89172508-89172527 None:intergenic 45.0%
AGCTCTACAACGTTATGTGG+TGG - Chr4:89172413-89172432 MsG0480023735.01.T01:intron 45.0%
AGGAGGATAGATTTGGCACA+AGG - Chr4:89173153-89173172 MsG0480023735.01.T01:intron 45.0%
ATCAGCTGAGTTATGCTCAC+GGG + Chr4:89176631-89176650 None:intergenic 45.0%
ATTCTTGGCCTATTGATCGG+AGG - Chr4:89173268-89173287 MsG0480023735.01.T01:intron 45.0%
CCTGGCACAATCAATTGGTA+GGG + Chr4:89173067-89173086 None:intergenic 45.0%
CGAAGCTCTACAACGTTATG+TGG - Chr4:89172410-89172429 MsG0480023735.01.T01:intron 45.0%
CTCAATTCCTAAGGGATGGA+AGG - Chr4:89177214-89177233 MsG0480023735.01.T01:intron 45.0%
GAAATTGACCTCTTGGCCAA+GGG + Chr4:89172507-89172526 None:intergenic 45.0%
GAATTGGGAGATCCTTTGCA+GGG + Chr4:89177615-89177634 None:intergenic 45.0%
GCTTCTCAATTCCTAAGGGA+TGG - Chr4:89177210-89177229 MsG0480023735.01.T01:intron 45.0%
GGAGGATAGATTTGGCACAA+GGG - Chr4:89173154-89173173 MsG0480023735.01.T01:intron 45.0%
GGGTATTTGACCCTAAGGTT+TGG - Chr4:89175814-89175833 MsG0480023735.01.T01:intron 45.0%
GGGTCAAATTTCTCTGGCAT+GGG + Chr4:89177406-89177425 None:intergenic 45.0%
GGTCACTTGACTCCACTATT+TGG + Chr4:89174359-89174378 None:intergenic 45.0%
GGTGAATAAGTGAGATCTCC+GGG + Chr4:89176695-89176714 None:intergenic 45.0%
GTGAATAAGTGAGATCTCCG+GGG + Chr4:89176694-89176713 None:intergenic 45.0%
GTGAGCATAACTCAGCTGAT+AGG - Chr4:89176631-89176650 MsG0480023735.01.T01:intron 45.0%
GTGTTCCTGGCACAATCAAT+TGG + Chr4:89173072-89173091 None:intergenic 45.0%
TACAATGGTGCAATGGCAGT+TGG + Chr4:89171908-89171927 None:intergenic 45.0%
TCCTGGCACAATCAATTGGT+AGG + Chr4:89173068-89173087 None:intergenic 45.0%
TGGGTCAAATTTCTCTGGCA+TGG + Chr4:89177407-89177426 None:intergenic 45.0%
TGTCATGTCCTCCGATCAAT+AGG + Chr4:89173279-89173298 None:intergenic 45.0%
! GCTTTGTTGAATGGTGTTCC+TGG + Chr4:89173085-89173104 None:intergenic 45.0%
! GGAGCAGGACTTTAGGAAAA+AGG - Chr4:89175848-89175867 MsG0480023735.01.T01:intron 45.0%
! GGCACAAAAGTATAAGGAGC+TGG + Chr4:89177451-89177470 None:intergenic 45.0%
! TTAGGGGGTGTGCAATTTCA+TGG + Chr4:89171842-89171861 None:intergenic 45.0%
!! GAATCTACGGTGGTTTGTTG+TGG - Chr4:89172228-89172247 MsG0480023735.01.T01:CDS 45.0%
!!! ACTTTTGTGCCATTTGGTGG+AGG - Chr4:89177460-89177479 MsG0480023735.01.T01:CDS 45.0%
!!! CGATTTTGGAGCAGGACTTT+AGG - Chr4:89175841-89175860 MsG0480023735.01.T01:intron 45.0%
!! CAATTAAATTTATAAATTTA+AGG + Chr4:89172916-89172935 None:intergenic 5.0%
!! TTAAAAATAAAAATCAATTA+TGG + Chr4:89176457-89176476 None:intergenic 5.0%
ACCTTAGTCGACAAGTCCGA+TGG + Chr4:89176376-89176395 None:intergenic 50.0%
ATCCTTGGTCCTCCACCAAA+TGG + Chr4:89177472-89177491 None:intergenic 50.0%
CAAAGAGAAGGAGAAGGGAG+AGG + Chr4:89172007-89172026 None:intergenic 50.0%
CCATTCCAGTTAATTGCGGC+CGG - Chr4:89173033-89173052 MsG0480023735.01.T01:intron 50.0%
CCCTACCAATTGATTGTGCC+AGG - Chr4:89173064-89173083 MsG0480023735.01.T01:intron 50.0%
CGAATTGGGAGATCCTTTGC+AGG + Chr4:89177616-89177635 None:intergenic 50.0%
GACAGGGTTATTCAAGCCAG+TGG + Chr4:89176481-89176500 None:intergenic 50.0%
GCTCGCCGAGATATTTGACA+AGG + Chr4:89173323-89173342 None:intergenic 50.0%
TCCACTCCAAGGAGGTTTCA+GGG - Chr4:89177160-89177179 MsG0480023735.01.T01:intron 50.0%
TGAAACCTCCTTGGAGTGGA+GGG + Chr4:89177160-89177179 None:intergenic 50.0%
TGAAATCACCGTCTACCCCT+TGG - Chr4:89172488-89172507 MsG0480023735.01.T01:intron 50.0%
TGATTCCGGCCGCAATTAAC+TGG + Chr4:89173041-89173060 None:intergenic 50.0%
TTGGACTGCGTGTCCATGTT+TGG + Chr4:89171889-89171908 None:intergenic 50.0%
! GGGTAACCCATTTTACCTGG+TGG + Chr4:89172091-89172110 None:intergenic 50.0%
! TCCATCGGACTTGTCGACTA+AGG - Chr4:89176372-89176391 MsG0480023735.01.T01:intron 50.0%
! TCTTTTCCAGGGCACATCCT+TGG + Chr4:89177487-89177506 None:intergenic 50.0%
!!! TTGGTCTGCGATTTTGGAGC+AGG - Chr4:89175833-89175852 MsG0480023735.01.T01:intron 50.0%
AGACTTTCCCCTCCACTCCA+AGG - Chr4:89177149-89177168 MsG0480023735.01.T01:intron 55.0%
CCGGCCGCAATTAACTGGAA+TGG + Chr4:89173036-89173055 None:intergenic 55.0%
CTCCACTCCAAGGAGGTTTC+AGG - Chr4:89177159-89177178 MsG0480023735.01.T01:intron 55.0%
CTGAAACCTCCTTGGAGTGG+AGG + Chr4:89177161-89177180 None:intergenic 55.0%
GAAACCTCCTTGGAGTGGAG+GGG + Chr4:89177159-89177178 None:intergenic 55.0%
GATGCAGCTGCAGGCTATTG+GGG + Chr4:89174380-89174399 None:intergenic 55.0%
GGAGATCCTTTGCAGGGATG+GGG + Chr4:89177609-89177628 None:intergenic 55.0%
GGATGCAGCTGCAGGCTATT+GGG + Chr4:89174381-89174400 None:intergenic 55.0%
GGGAGATCCTTTGCAGGGAT+GGG + Chr4:89177610-89177629 None:intergenic 55.0%
TCCATTCCCCATCCCTGCAA+AGG - Chr4:89177600-89177619 MsG0480023735.01.T01:exon 55.0%
TCCCTGAAACCTCCTTGGAG+TGG + Chr4:89177164-89177183 None:intergenic 55.0%
TCCTTTGCAGGGATGGGGAA+TGG + Chr4:89177604-89177623 None:intergenic 55.0%
TGGCTTCCCTGAAACCTCCT+TGG + Chr4:89177169-89177188 None:intergenic 55.0%
TGGGAGATCCTTTGCAGGGA+TGG + Chr4:89177611-89177630 None:intergenic 55.0%
TGTGGTTGGGGTTTGAACCC+CGG - Chr4:89176674-89176693 MsG0480023735.01.T01:intron 55.0%
! TGCCATTTGGTGGAGGACCA+AGG - Chr4:89177467-89177486 MsG0480023735.01.T01:CDS 55.0%
ACATGCACGGATGCAGCTGC+AGG + Chr4:89174389-89174408 None:intergenic 60.0%
CCTCTTGGCCAAGGGGTAGA+CGG + Chr4:89172499-89172518 None:intergenic 60.0%
CGGATGCAGCTGCAGGCTAT+TGG + Chr4:89174382-89174401 None:intergenic 60.0%
CTTTCCCCTCCACTCCAAGG+AGG - Chr4:89177152-89177171 MsG0480023735.01.T01:intron 60.0%
CCGTCTACCCCTTGGCCAAG+AGG - Chr4:89172496-89172515 MsG0480023735.01.T01:intron 65.0%
GGAGGACCAAGGATGTGCCC+TGG - Chr4:89177478-89177497 MsG0480023735.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89171760 89178023 89171760 ID=MsG0480023735.01;Name=MsG0480023735.01
Chr4 mRNA 89171760 89178023 89171760 ID=MsG0480023735.01.T01;Parent=MsG0480023735.01;Name=MsG0480023735.01.T01;_AED=0.47;_eAED=0.47;_QI=423|0.66|0.5|1|1|1|4|366|295
Chr4 exon 89171760 89172425 89171760 ID=MsG0480023735.01.T01:exon:5006;Parent=MsG0480023735.01.T01
Chr4 exon 89172548 89172733 89172548 ID=MsG0480023735.01.T01:exon:5005;Parent=MsG0480023735.01.T01
Chr4 exon 89176756 89176822 89176756 ID=MsG0480023735.01.T01:exon:5004;Parent=MsG0480023735.01.T01
Chr4 exon 89177266 89178023 89177266 ID=MsG0480023735.01.T01:exon:5003;Parent=MsG0480023735.01.T01
Chr4 five_prime_UTR 89177601 89178023 89177601 ID=MsG0480023735.01.T01:five_prime_utr;Parent=MsG0480023735.01.T01
Chr4 CDS 89177266 89177600 89177266 ID=MsG0480023735.01.T01:cds;Parent=MsG0480023735.01.T01
Chr4 CDS 89176756 89176822 89176756 ID=MsG0480023735.01.T01:cds;Parent=MsG0480023735.01.T01
Chr4 CDS 89172548 89172733 89172548 ID=MsG0480023735.01.T01:cds;Parent=MsG0480023735.01.T01
Chr4 CDS 89172126 89172425 89172126 ID=MsG0480023735.01.T01:cds;Parent=MsG0480023735.01.T01
Chr4 three_prime_UTR 89171760 89172125 89171760 ID=MsG0480023735.01.T01:three_prime_utr;Parent=MsG0480023735.01.T01
Gene Sequence

>MsG0480023735.01.T01

ATGCGTAAATATTCCTCCGAACTCTTTAAAACATCAATCGTAGGAGAATCTACGGTGGTTTGTTGTGGAGCAGCAAGTAACAAGTTTTTGTTTTCAAACGAGAACAAACTTGTGACTGCATGGTGGCCAGATAGTGTAAACAAAATCTTCCCTACTACTTCTCTTGACTCTAGCTTGAAGGAAGAATCTATTAAGATGAGAAAATTGCTTCCTCAATTCTTTAAACCCGAAGCTCTACAACGTTATGTGGTGGTCATGGATGTTATAGCTCAAAGACACTTTGTTTCTCATTGGGAGAACAAAGATGAAATCACCGTCTACCCCTTGGCCAAGAGGTACACCTTTTTGTTAGCTTGTCGTTTGTTCATGAGCGTTGAAGACGAGAATCATGTAGCAAATTCACAAATGGAAATTGCAAAATCGAAACCAGCAGGAGAATTGTTGAATTGGGATGACCTCAAGAAAATGAAATACTCTTGGAACGTAGCTTGTGAAGTAATGAGACTTTCCCCTCCACTCCAAGGAGGTTTCAGGGAAGCCATCACTGACTTTATGTTCAATGGCTTCTCAATTCCTAAGGGATGGAAGCTTTATTGGAGTGCAAATTCAACACATAAGAACGCAGAATGTTTTCCCATGCCAGAGAAATTTGACCCAACAAGATTTGAAGGAAATGGACCAGCTCCTTATACTTTTGTGCCATTTGGTGGAGGACCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATACTAGTTTTCATGCACAATTTAGTGAAAAGGTTTAAGTGGGAAAAGGTGATTCCAGATGAGAAGATTATTGTTGATCCATTCCCCATCCCTGCAAAGGATCTCCCAATTCGCCTTTATCCACACAAAGCTTAA
Protein sequence

>MsG0480023735.01.T01

MRKYSSELFKTSIVGESTVVCCGAASNKFLFSNENKLVTAWWPDSVNKIFPTTSLDSSLKEESIKMRKLLPQFFKPEALQRYVVVMDVIAQRHFVSHWENKDEITVYPLAKRYTFLLACRLFMSVEDENHVANSQMEIAKSKPAGELLNWDDLKKMKYSWNVACEVMRLSPPLQGGFREAITDFMFNGFSIPKGWKLYWSANSTHKNAECFPMPEKFDPTRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKVIPDEKIIVDPFPIPAKDLPIRLYPHKA*