Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007260.01.T01 | BAL45203.1 | 98.601 | 143 | 2 | 0 | 65 | 207 | 378 | 520 | 1.58E-96 | 300 |
MsG0280007260.01.T01 | BAL45203.1 | 71.25 | 80 | 23 | 0 | 1 | 80 | 168 | 247 | 1.03E-27 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007260.01.T01 | Q2MJ21 | 98.601 | 143 | 2 | 0 | 65 | 207 | 378 | 520 | 2.03E-99 | 300 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007260.01.T01 | H1A984 | 98.601 | 143 | 2 | 0 | 65 | 207 | 378 | 520 | 7.56e-97 | 300 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280007260.01 | MsG0280009206.01 | 0.887118 | 1.889612e-72 | 1.386969e-68 |
MsG0280007260.01 | MsG0280009207.01 | 0.890445 | 9.793856e-74 | 8.235371e-70 |
MsG0280007260.01 | MsG0480023735.01 | 0.804940 | 1.696735e-49 | 8.863199e-47 |
MsG0280007260.01 | MsG0780039312.01 | 0.803646 | 3.156200e-49 | 1.594553e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007260.01.T01 | MTR_2g023680 | 98.601 | 143 | 2 | 0 | 65 | 207 | 378 | 520 | 1.98e-100 | 300 |
MsG0280007260.01.T01 | MTR_2g023680 | 68.750 | 80 | 25 | 0 | 1 | 80 | 168 | 247 | 2.03e-30 | 117 |
MsG0280007260.01.T01 | MTR_2g072420 | 67.143 | 140 | 46 | 0 | 67 | 206 | 3 | 142 | 2.05e-72 | 216 |
MsG0280007260.01.T01 | MTR_2g072260 | 71.631 | 141 | 40 | 0 | 67 | 207 | 373 | 513 | 1.18e-71 | 226 |
MsG0280007260.01.T01 | MTR_2g072260 | 60.000 | 80 | 32 | 0 | 1 | 80 | 161 | 240 | 5.02e-25 | 102 |
MsG0280007260.01.T01 | MTR_2g055470 | 69.231 | 143 | 44 | 0 | 65 | 207 | 378 | 520 | 3.25e-71 | 225 |
MsG0280007260.01.T01 | MTR_2g055470 | 50.000 | 80 | 40 | 0 | 1 | 80 | 168 | 247 | 1.42e-21 | 92.0 |
MsG0280007260.01.T01 | MTR_2g055430 | 70.922 | 141 | 41 | 0 | 67 | 207 | 380 | 520 | 4.43e-71 | 224 |
MsG0280007260.01.T01 | MTR_2g055430 | 53.750 | 80 | 37 | 0 | 1 | 80 | 168 | 247 | 3.90e-23 | 96.7 |
MsG0280007260.01.T01 | MTR_2g072250 | 69.504 | 141 | 43 | 0 | 67 | 207 | 376 | 516 | 6.62e-71 | 224 |
MsG0280007260.01.T01 | MTR_2g072250 | 58.750 | 80 | 33 | 0 | 1 | 80 | 164 | 243 | 3.36e-24 | 99.8 |
MsG0280007260.01.T01 | MTR_2g072310 | 69.286 | 140 | 43 | 0 | 67 | 206 | 213 | 352 | 7.29e-71 | 219 |
MsG0280007260.01.T01 | MTR_2g072310 | 53.750 | 80 | 37 | 0 | 1 | 80 | 1 | 80 | 5.57e-23 | 94.7 |
MsG0280007260.01.T01 | MTR_2g072400 | 68.085 | 141 | 45 | 0 | 67 | 207 | 378 | 518 | 1.35e-69 | 221 |
MsG0280007260.01.T01 | MTR_2g072400 | 52.500 | 80 | 38 | 0 | 1 | 80 | 166 | 245 | 2.83e-21 | 91.3 |
MsG0280007260.01.T01 | MTR_2g072380 | 65.714 | 140 | 48 | 0 | 67 | 206 | 213 | 352 | 3.46e-68 | 213 |
MsG0280007260.01.T01 | MTR_2g072380 | 53.750 | 80 | 37 | 0 | 1 | 80 | 1 | 80 | 3.84e-22 | 92.8 |
MsG0280007260.01.T01 | MTR_2g072340 | 66.429 | 140 | 47 | 0 | 67 | 206 | 378 | 517 | 4.49e-68 | 217 |
MsG0280007260.01.T01 | MTR_2g072340 | 53.846 | 78 | 36 | 0 | 3 | 80 | 168 | 245 | 7.97e-21 | 90.1 |
MsG0280007260.01.T01 | MTR_5g095230 | 67.376 | 141 | 46 | 0 | 67 | 207 | 376 | 516 | 6.82e-67 | 214 |
MsG0280007260.01.T01 | MTR_5g095230 | 53.535 | 99 | 38 | 2 | 1 | 91 | 164 | 262 | 1.54e-23 | 97.8 |
MsG0280007260.01.T01 | MTR_2g072380 | 65.714 | 140 | 48 | 0 | 67 | 206 | 353 | 492 | 1.98e-66 | 212 |
MsG0280007260.01.T01 | MTR_2g072380 | 53.750 | 80 | 37 | 0 | 1 | 80 | 141 | 220 | 1.17e-21 | 92.4 |
MsG0280007260.01.T01 | MTR_8g042020 | 60.432 | 139 | 55 | 0 | 67 | 205 | 385 | 523 | 7.02e-59 | 193 |
MsG0280007260.01.T01 | MTR_8g042020 | 54.167 | 72 | 33 | 0 | 1 | 72 | 175 | 246 | 4.91e-19 | 84.7 |
MsG0280007260.01.T01 | MTR_8g042040 | 60.432 | 139 | 55 | 0 | 67 | 205 | 369 | 507 | 1.09e-58 | 192 |
MsG0280007260.01.T01 | MTR_8g042040 | 66.667 | 57 | 19 | 0 | 1 | 57 | 175 | 231 | 1.87e-19 | 86.3 |
MsG0280007260.01.T01 | MTR_2g072270 | 61.151 | 139 | 54 | 0 | 67 | 205 | 385 | 523 | 1.74e-58 | 192 |
MsG0280007260.01.T01 | MTR_2g072270 | 41.441 | 111 | 56 | 4 | 1 | 109 | 175 | 278 | 3.34e-13 | 68.2 |
MsG0280007260.01.T01 | MTR_8g042060 | 58.993 | 139 | 57 | 0 | 67 | 205 | 350 | 488 | 3.55e-58 | 190 |
MsG0280007260.01.T01 | MTR_8g042060 | 58.993 | 139 | 57 | 0 | 67 | 205 | 386 | 524 | 7.03e-58 | 190 |
MsG0280007260.01.T01 | MTR_8g042060 | 63.158 | 57 | 21 | 0 | 1 | 57 | 175 | 231 | 1.98e-18 | 83.2 |
MsG0280007260.01.T01 | MTR_4g031820 | 56.835 | 139 | 60 | 0 | 67 | 205 | 368 | 506 | 7.80e-56 | 184 |
MsG0280007260.01.T01 | MTR_4g031820 | 34.343 | 99 | 63 | 2 | 1 | 97 | 179 | 277 | 5.82e-13 | 67.4 |
MsG0280007260.01.T01 | MTR_4g031820 | 56.835 | 139 | 60 | 0 | 67 | 205 | 390 | 528 | 1.69e-55 | 184 |
MsG0280007260.01.T01 | MTR_4g031820 | 34.343 | 99 | 63 | 2 | 1 | 97 | 179 | 277 | 6.26e-13 | 67.0 |
MsG0280007260.01.T01 | MTR_8g042000 | 61.871 | 139 | 53 | 0 | 67 | 205 | 386 | 524 | 1.39e-54 | 182 |
MsG0280007260.01.T01 | MTR_8g042000 | 66.667 | 57 | 19 | 0 | 1 | 57 | 175 | 231 | 4.69e-19 | 85.1 |
MsG0280007260.01.T01 | MTR_2g072330 | 43.500 | 200 | 69 | 5 | 7 | 206 | 149 | 304 | 5.83e-44 | 149 |
MsG0280007260.01.T01 | MTR_2g072330 | 39.496 | 119 | 69 | 1 | 1 | 119 | 50 | 165 | 2.38e-21 | 89.7 |
MsG0280007260.01.T01 | MTR_2g072330 | 43.000 | 200 | 70 | 4 | 7 | 206 | 260 | 415 | 8.87e-43 | 148 |
MsG0280007260.01.T01 | MTR_2g072330 | 50.000 | 80 | 40 | 0 | 1 | 80 | 161 | 240 | 1.03e-20 | 89.4 |
MsG0280007260.01.T01 | MTR_7g098550 | 44.681 | 141 | 74 | 1 | 65 | 205 | 361 | 497 | 1.13e-41 | 147 |
MsG0280007260.01.T01 | MTR_7g098550 | 40.506 | 79 | 47 | 0 | 2 | 80 | 168 | 246 | 1.74e-12 | 65.9 |
MsG0280007260.01.T01 | MTR_7g098550 | 44.604 | 139 | 73 | 1 | 67 | 205 | 371 | 505 | 1.18e-41 | 147 |
MsG0280007260.01.T01 | MTR_7g098550 | 40.506 | 79 | 47 | 0 | 2 | 80 | 168 | 246 | 1.72e-12 | 65.9 |
MsG0280007260.01.T01 | MTR_8g008530 | 43.262 | 141 | 80 | 0 | 65 | 205 | 379 | 519 | 1.31e-38 | 139 |
MsG0280007260.01.T01 | MTR_4g113650 | 38.095 | 147 | 91 | 0 | 59 | 205 | 373 | 519 | 4.17e-37 | 135 |
MsG0280007260.01.T01 | MTR_7g006900 | 38.636 | 176 | 101 | 3 | 32 | 207 | 306 | 474 | 2.07e-36 | 132 |
MsG0280007260.01.T01 | MTR_1g085680 | 42.857 | 140 | 80 | 0 | 67 | 206 | 378 | 517 | 2.53e-36 | 133 |
MsG0280007260.01.T01 | MTR_6g072490 | 39.007 | 141 | 86 | 0 | 63 | 203 | 371 | 511 | 2.95e-36 | 133 |
MsG0280007260.01.T01 | MTR_3g093530 | 42.754 | 138 | 79 | 0 | 67 | 204 | 386 | 523 | 6.78e-36 | 132 |
MsG0280007260.01.T01 | MTR_1g022040 | 39.007 | 141 | 82 | 1 | 65 | 205 | 367 | 503 | 7.51e-36 | 131 |
MsG0280007260.01.T01 | MTR_6g017325 | 43.571 | 140 | 73 | 3 | 65 | 203 | 371 | 505 | 1.24e-35 | 131 |
MsG0280007260.01.T01 | MTR_0147s0030 | 42.553 | 141 | 81 | 0 | 65 | 205 | 391 | 531 | 1.58e-35 | 131 |
MsG0280007260.01.T01 | MTR_1g101040 | 37.589 | 141 | 88 | 0 | 63 | 203 | 373 | 513 | 2.33e-35 | 130 |
MsG0280007260.01.T01 | MTR_3g062900 | 47.500 | 120 | 59 | 2 | 90 | 205 | 1 | 120 | 4.76e-35 | 120 |
MsG0280007260.01.T01 | MTR_1g101050 | 33.918 | 171 | 106 | 1 | 33 | 203 | 346 | 509 | 9.29e-35 | 129 |
MsG0280007260.01.T01 | MTR_7g055793 | 44.030 | 134 | 75 | 0 | 65 | 198 | 329 | 462 | 3.62e-34 | 126 |
MsG0280007260.01.T01 | MTR_7g055793 | 44.030 | 134 | 75 | 0 | 65 | 198 | 384 | 517 | 7.40e-34 | 126 |
MsG0280007260.01.T01 | MTR_1g069200 | 35.461 | 141 | 91 | 0 | 63 | 203 | 370 | 510 | 1.12e-32 | 123 |
MsG0280007260.01.T01 | MTR_8g469360 | 39.041 | 146 | 87 | 1 | 61 | 206 | 280 | 423 | 8.09e-32 | 119 |
MsG0280007260.01.T01 | MTR_2g061200 | 39.437 | 142 | 86 | 0 | 64 | 205 | 388 | 529 | 2.17e-31 | 119 |
MsG0280007260.01.T01 | MTR_2g023680 | 68.750 | 80 | 25 | 0 | 1 | 80 | 168 | 247 | 3.46e-31 | 117 |
MsG0280007260.01.T01 | MTR_0025s0110 | 34.752 | 141 | 92 | 0 | 63 | 203 | 384 | 524 | 3.79e-31 | 119 |
MsG0280007260.01.T01 | MTR_2g055530 | 52.500 | 80 | 38 | 0 | 1 | 80 | 95 | 174 | 9.41e-24 | 94.0 |
MsG0280007260.01.T01 | MTR_5g095230 | 53.535 | 99 | 38 | 2 | 1 | 91 | 164 | 262 | 9.42e-24 | 97.8 |
MsG0280007260.01.T01 | MTR_2g055430 | 53.750 | 80 | 37 | 0 | 1 | 80 | 168 | 247 | 1.55e-23 | 97.1 |
MsG0280007260.01.T01 | MTR_8g042000 | 66.667 | 57 | 19 | 0 | 1 | 57 | 175 | 231 | 4.15e-19 | 84.7 |
MsG0280007260.01.T01 | MTR_0727s0010 | 43.902 | 82 | 46 | 0 | 124 | 205 | 13 | 94 | 7.18e-19 | 78.6 |
MsG0280007260.01.T01 | MTR_1g062190 | 37.313 | 134 | 75 | 5 | 50 | 180 | 387 | 514 | 1.29e-18 | 83.6 |
MsG0280007260.01.T01 | MTR_7g079440 | 34.014 | 147 | 84 | 8 | 68 | 206 | 509 | 650 | 5.42e-16 | 76.3 |
MsG0280007260.01.T01 | MTR_5g009110 | 32.022 | 178 | 88 | 7 | 58 | 204 | 246 | 421 | 1.66e-15 | 74.7 |
MsG0280007260.01.T01 | MTR_5g009110 | 32.022 | 178 | 88 | 7 | 58 | 204 | 394 | 569 | 2.07e-15 | 74.3 |
MsG0280007260.01.T01 | MTR_4g012320 | 28.750 | 160 | 98 | 5 | 53 | 205 | 73 | 223 | 2.33e-14 | 69.7 |
MsG0280007260.01.T01 | MTR_6g035100 | 32.824 | 131 | 82 | 3 | 65 | 191 | 351 | 479 | 3.08e-14 | 70.9 |
MsG0280007260.01.T01 | MTR_1g035750 | 30.303 | 165 | 97 | 5 | 53 | 204 | 345 | 504 | 3.71e-14 | 70.9 |
MsG0280007260.01.T01 | MTR_4g075110 | 25.281 | 178 | 124 | 3 | 34 | 204 | 373 | 548 | 2.16e-13 | 68.6 |
MsG0280007260.01.T01 | MTR_5g018990 | 32.061 | 131 | 86 | 3 | 61 | 190 | 355 | 483 | 3.91e-13 | 67.8 |
MsG0280007260.01.T01 | MTR_8g104030 | 31.496 | 127 | 85 | 1 | 61 | 187 | 131 | 255 | 4.75e-13 | 66.6 |
MsG0280007260.01.T01 | MTR_4g031820 | 34.343 | 99 | 63 | 2 | 1 | 97 | 179 | 277 | 6.48e-13 | 67.0 |
MsG0280007260.01.T01 | MTR_1g036130 | 27.660 | 141 | 90 | 3 | 71 | 204 | 370 | 505 | 9.55e-13 | 66.6 |
MsG0280007260.01.T01 | MTR_5g020020 | 34.211 | 114 | 69 | 3 | 68 | 179 | 272 | 381 | 9.60e-13 | 66.6 |
MsG0280007260.01.T01 | MTR_5g091760 | 34.259 | 108 | 65 | 2 | 71 | 178 | 350 | 451 | 1.02e-12 | 66.6 |
MsG0280007260.01.T01 | MTR_6g004600 | 29.012 | 162 | 105 | 4 | 51 | 204 | 355 | 514 | 1.05e-12 | 66.6 |
MsG0280007260.01.T01 | MTR_6g004590 | 30.000 | 140 | 92 | 3 | 69 | 204 | 377 | 514 | 1.11e-12 | 66.6 |
MsG0280007260.01.T01 | MTR_5g020020 | 34.211 | 114 | 69 | 3 | 68 | 179 | 346 | 455 | 1.18e-12 | 66.2 |
MsG0280007260.01.T01 | MTR_7g033570 | 30.000 | 140 | 92 | 3 | 69 | 204 | 356 | 493 | 1.32e-12 | 66.2 |
MsG0280007260.01.T01 | MTR_7g098550 | 40.506 | 79 | 47 | 0 | 2 | 80 | 168 | 246 | 1.57e-12 | 65.9 |
MsG0280007260.01.T01 | MTR_1g035140 | 29.457 | 129 | 89 | 2 | 65 | 193 | 356 | 482 | 1.92e-12 | 65.9 |
MsG0280007260.01.T01 | MTR_1g035940 | 27.660 | 141 | 90 | 3 | 71 | 204 | 371 | 506 | 1.96e-12 | 65.9 |
MsG0280007260.01.T01 | MTR_1g035760 | 27.660 | 141 | 90 | 3 | 71 | 204 | 343 | 478 | 2.11e-12 | 65.5 |
MsG0280007260.01.T01 | MTR_3g058060 | 30.556 | 144 | 95 | 4 | 51 | 191 | 343 | 484 | 2.21e-12 | 65.5 |
MsG0280007260.01.T01 | MTR_5g092150 | 29.730 | 111 | 74 | 2 | 68 | 178 | 340 | 446 | 4.24e-12 | 64.7 |
MsG0280007260.01.T01 | MTR_3g058210 | 31.818 | 132 | 87 | 3 | 63 | 193 | 356 | 485 | 5.16e-12 | 64.3 |
MsG0280007260.01.T01 | MTR_1g035670 | 27.273 | 143 | 92 | 3 | 69 | 204 | 364 | 501 | 5.24e-12 | 64.3 |
MsG0280007260.01.T01 | MTR_1g036010 | 25.926 | 162 | 102 | 4 | 56 | 204 | 350 | 506 | 5.41e-12 | 64.3 |
MsG0280007260.01.T01 | MTR_8g036185 | 28.571 | 140 | 83 | 3 | 55 | 178 | 348 | 486 | 5.57e-12 | 64.3 |
MsG0280007260.01.T01 | MTR_1g037560 | 28.188 | 149 | 103 | 3 | 59 | 204 | 395 | 542 | 5.68e-12 | 64.3 |
MsG0280007260.01.T01 | MTR_5g070840 | 29.771 | 131 | 90 | 2 | 61 | 190 | 25 | 154 | 5.81e-12 | 62.0 |
MsG0280007260.01.T01 | MTR_5g095290 | 29.530 | 149 | 100 | 4 | 44 | 191 | 336 | 480 | 7.08e-12 | 63.9 |
MsG0280007260.01.T01 | MTR_7g033580 | 28.571 | 140 | 94 | 3 | 69 | 204 | 356 | 493 | 7.26e-12 | 63.9 |
MsG0280007260.01.T01 | MTR_8g104100 | 27.848 | 158 | 110 | 2 | 34 | 191 | 88 | 241 | 9.16e-12 | 62.8 |
MsG0280007260.01.T01 | MTR_3g058220 | 30.496 | 141 | 92 | 4 | 65 | 204 | 356 | 491 | 9.44e-12 | 63.5 |
MsG0280007260.01.T01 | MTR_1g035580 | 28.358 | 134 | 90 | 3 | 71 | 200 | 360 | 491 | 1.11e-11 | 63.5 |
MsG0280007260.01.T01 | MTR_1g035830 | 26.950 | 141 | 91 | 3 | 71 | 204 | 371 | 506 | 1.21e-11 | 63.5 |
MsG0280007260.01.T01 | MTR_5g019010 | 26.786 | 168 | 114 | 4 | 31 | 191 | 318 | 483 | 1.28e-11 | 63.2 |
MsG0280007260.01.T01 | MTR_8g098435 | 26.316 | 152 | 106 | 2 | 50 | 200 | 354 | 500 | 1.58e-11 | 63.2 |
MsG0280007260.01.T01 | MTR_5g018980 | 29.688 | 128 | 87 | 3 | 65 | 191 | 361 | 486 | 1.99e-11 | 62.8 |
MsG0280007260.01.T01 | MTR_1g050362 | 28.030 | 132 | 83 | 3 | 71 | 195 | 371 | 497 | 2.41e-11 | 62.4 |
MsG0280007260.01.T01 | MTR_7g075610 | 28.099 | 121 | 82 | 3 | 63 | 179 | 353 | 472 | 3.41e-11 | 62.0 |
MsG0280007260.01.T01 | MTR_1g015860 | 27.612 | 134 | 89 | 3 | 65 | 197 | 386 | 512 | 5.25e-11 | 61.6 |
MsG0280007260.01.T01 | MTR_4g071710 | 26.531 | 147 | 103 | 3 | 33 | 178 | 339 | 481 | 6.48e-11 | 61.2 |
MsG0280007260.01.T01 | MTR_1g037550 | 26.531 | 147 | 96 | 3 | 65 | 204 | 405 | 546 | 6.51e-11 | 61.2 |
MsG0280007260.01.T01 | MTR_3g057970 | 30.172 | 116 | 78 | 3 | 65 | 178 | 345 | 459 | 7.27e-11 | 61.2 |
MsG0280007260.01.T01 | MTR_3g057980 | 28.030 | 132 | 92 | 3 | 61 | 191 | 347 | 476 | 7.86e-11 | 60.8 |
MsG0280007260.01.T01 | MTR_1g035800 | 27.536 | 138 | 94 | 3 | 71 | 204 | 376 | 511 | 9.77e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280007260.01.T01 | AT3G14610 | 57.447 | 141 | 60 | 0 | 65 | 205 | 372 | 512 | 1.40e-56 | 187 |
MsG0280007260.01.T01 | AT3G14610 | 37.500 | 80 | 49 | 1 | 1 | 79 | 166 | 245 | 1.10e-11 | 63.5 |
MsG0280007260.01.T01 | AT3G14640 | 58.156 | 141 | 59 | 0 | 65 | 205 | 374 | 514 | 2.71e-56 | 186 |
MsG0280007260.01.T01 | AT3G14640 | 41.463 | 82 | 46 | 1 | 1 | 80 | 167 | 248 | 7.43e-16 | 75.9 |
MsG0280007260.01.T01 | AT3G14640 | 58.156 | 141 | 59 | 0 | 65 | 205 | 396 | 536 | 4.57e-56 | 186 |
MsG0280007260.01.T01 | AT3G14640 | 41.463 | 82 | 46 | 1 | 1 | 80 | 189 | 270 | 7.01e-16 | 75.9 |
MsG0280007260.01.T01 | AT3G14630 | 56.028 | 141 | 62 | 0 | 65 | 205 | 368 | 508 | 4.70e-56 | 185 |
MsG0280007260.01.T01 | AT3G14630 | 43.210 | 81 | 45 | 1 | 1 | 80 | 163 | 243 | 2.28e-16 | 77.4 |
MsG0280007260.01.T01 | AT3G14630 | 56.028 | 141 | 62 | 0 | 65 | 205 | 423 | 563 | 5.46e-56 | 186 |
MsG0280007260.01.T01 | AT3G14630 | 43.210 | 81 | 45 | 1 | 1 | 80 | 218 | 298 | 2.55e-16 | 77.0 |
MsG0280007260.01.T01 | AT3G14690 | 56.028 | 141 | 62 | 0 | 65 | 205 | 372 | 512 | 1.26e-55 | 184 |
MsG0280007260.01.T01 | AT3G14690 | 37.805 | 82 | 50 | 1 | 1 | 81 | 167 | 248 | 2.20e-14 | 71.6 |
MsG0280007260.01.T01 | AT3G14690 | 56.028 | 141 | 62 | 0 | 65 | 205 | 407 | 547 | 4.01e-55 | 184 |
MsG0280007260.01.T01 | AT3G14690 | 37.805 | 82 | 50 | 1 | 1 | 81 | 202 | 283 | 2.37e-14 | 71.2 |
MsG0280007260.01.T01 | AT3G14680 | 55.319 | 141 | 63 | 0 | 65 | 205 | 372 | 512 | 4.61e-55 | 183 |
MsG0280007260.01.T01 | AT3G14680 | 35.802 | 81 | 51 | 1 | 1 | 80 | 167 | 247 | 3.89e-13 | 67.8 |
MsG0280007260.01.T01 | AT3G14660 | 54.610 | 141 | 64 | 0 | 65 | 205 | 226 | 366 | 2.40e-54 | 177 |
MsG0280007260.01.T01 | AT3G14660 | 36.275 | 102 | 54 | 4 | 1 | 92 | 21 | 121 | 3.28e-13 | 67.8 |
MsG0280007260.01.T01 | AT3G14660 | 54.610 | 141 | 64 | 0 | 65 | 205 | 372 | 512 | 5.36e-53 | 177 |
MsG0280007260.01.T01 | AT3G14660 | 36.275 | 102 | 54 | 4 | 1 | 92 | 167 | 267 | 4.00e-13 | 67.8 |
MsG0280007260.01.T01 | AT3G14650 | 53.901 | 141 | 65 | 0 | 65 | 205 | 372 | 512 | 6.19e-50 | 169 |
MsG0280007260.01.T01 | AT3G14650 | 38.272 | 81 | 49 | 1 | 1 | 80 | 167 | 247 | 1.07e-13 | 69.3 |
MsG0280007260.01.T01 | AT3G14620 | 54.348 | 138 | 62 | 1 | 65 | 201 | 374 | 511 | 1.35e-47 | 163 |
MsG0280007260.01.T01 | AT3G14620 | 60.000 | 65 | 25 | 1 | 1 | 64 | 171 | 235 | 1.58e-18 | 83.6 |
MsG0280007260.01.T01 | AT2G26710 | 41.497 | 147 | 86 | 0 | 59 | 205 | 369 | 515 | 3.30e-41 | 146 |
MsG0280007260.01.T01 | AT2G26710 | 37.500 | 80 | 50 | 0 | 1 | 80 | 171 | 250 | 3.83e-13 | 67.8 |
MsG0280007260.01.T01 | AT1G75130 | 43.357 | 143 | 77 | 1 | 65 | 207 | 367 | 505 | 2.38e-40 | 144 |
MsG0280007260.01.T01 | AT5G24900 | 46.763 | 139 | 72 | 1 | 67 | 205 | 272 | 408 | 1.54e-38 | 137 |
MsG0280007260.01.T01 | AT5G24900 | 46.099 | 141 | 74 | 1 | 65 | 205 | 387 | 525 | 1.10e-37 | 137 |
MsG0280007260.01.T01 | AT5G24910 | 45.070 | 142 | 76 | 1 | 65 | 206 | 392 | 531 | 2.35e-37 | 136 |
MsG0280007260.01.T01 | AT1G67110 | 41.844 | 141 | 79 | 2 | 63 | 203 | 371 | 508 | 4.11e-36 | 132 |
MsG0280007260.01.T01 | AT5G38450 | 41.958 | 143 | 80 | 2 | 61 | 203 | 375 | 514 | 6.11e-36 | 132 |
MsG0280007260.01.T01 | AT2G46950 | 42.754 | 138 | 79 | 0 | 68 | 205 | 433 | 570 | 8.56e-36 | 132 |
MsG0280007260.01.T01 | AT2G46960 | 44.203 | 138 | 76 | 1 | 67 | 203 | 262 | 399 | 1.13e-35 | 129 |
MsG0280007260.01.T01 | AT4G27710 | 41.606 | 137 | 80 | 0 | 67 | 203 | 379 | 515 | 1.02e-34 | 129 |
MsG0280007260.01.T01 | AT2G46960 | 44.203 | 138 | 76 | 1 | 67 | 203 | 378 | 515 | 1.26e-34 | 128 |
MsG0280007260.01.T01 | AT5G52400 | 33.523 | 176 | 114 | 2 | 28 | 203 | 345 | 517 | 4.18e-31 | 119 |
MsG0280007260.01.T01 | AT1G31800 | 39.655 | 116 | 65 | 5 | 68 | 180 | 430 | 543 | 4.44e-18 | 82.4 |
MsG0280007260.01.T01 | AT3G53130 | 36.090 | 133 | 81 | 4 | 71 | 200 | 403 | 534 | 7.46e-17 | 78.6 |
MsG0280007260.01.T01 | AT3G26125 | 29.197 | 137 | 96 | 1 | 65 | 200 | 391 | 527 | 1.31e-16 | 77.8 |
MsG0280007260.01.T01 | AT4G13290 | 30.147 | 136 | 82 | 2 | 65 | 199 | 344 | 467 | 3.61e-15 | 73.6 |
MsG0280007260.01.T01 | AT4G13310 | 30.147 | 136 | 82 | 2 | 65 | 199 | 351 | 474 | 4.44e-15 | 73.6 |
MsG0280007260.01.T01 | AT2G30770 | 30.000 | 170 | 108 | 4 | 7 | 174 | 300 | 460 | 5.75e-14 | 70.1 |
MsG0280007260.01.T01 | AT3G48270 | 28.188 | 149 | 99 | 3 | 34 | 179 | 314 | 457 | 9.10e-14 | 69.7 |
MsG0280007260.01.T01 | AT1G13150 | 25.899 | 139 | 102 | 1 | 65 | 202 | 376 | 514 | 1.84e-13 | 68.9 |
MsG0280007260.01.T01 | AT3G14660 | 36.275 | 102 | 54 | 4 | 1 | 92 | 167 | 267 | 3.47e-13 | 67.8 |
MsG0280007260.01.T01 | AT1G13140 | 24.460 | 139 | 104 | 1 | 65 | 202 | 357 | 495 | 4.34e-13 | 67.8 |
MsG0280007260.01.T01 | AT1G13140 | 24.460 | 139 | 104 | 1 | 65 | 202 | 383 | 521 | 4.50e-13 | 67.8 |
MsG0280007260.01.T01 | AT4G15110 | 30.822 | 146 | 67 | 5 | 67 | 181 | 411 | 553 | 6.03e-13 | 67.4 |
MsG0280007260.01.T01 | AT5G24950 | 30.172 | 116 | 80 | 1 | 65 | 179 | 350 | 465 | 6.53e-13 | 67.0 |
MsG0280007260.01.T01 | AT1G24540 | 27.143 | 140 | 101 | 1 | 65 | 203 | 379 | 518 | 1.21e-12 | 66.2 |
MsG0280007260.01.T01 | AT3G25180 | 35.135 | 111 | 70 | 2 | 65 | 174 | 364 | 473 | 2.13e-12 | 65.9 |
MsG0280007260.01.T01 | AT3G48310 | 26.050 | 119 | 87 | 1 | 65 | 182 | 343 | 461 | 5.04e-12 | 64.7 |
MsG0280007260.01.T01 | AT3G48300 | 28.070 | 114 | 81 | 1 | 65 | 177 | 340 | 453 | 5.94e-12 | 64.3 |
MsG0280007260.01.T01 | AT3G48300 | 28.070 | 114 | 81 | 1 | 65 | 177 | 342 | 455 | 5.95e-12 | 64.3 |
MsG0280007260.01.T01 | AT2G26170 | 27.564 | 156 | 106 | 3 | 25 | 179 | 344 | 493 | 1.01e-11 | 63.5 |
MsG0280007260.01.T01 | AT2G26170 | 27.564 | 156 | 106 | 3 | 25 | 179 | 261 | 410 | 1.02e-11 | 63.5 |
MsG0280007260.01.T01 | AT1G57750 | 28.986 | 138 | 96 | 2 | 69 | 204 | 358 | 495 | 1.14e-11 | 63.5 |
MsG0280007260.01.T01 | AT4G39510 | 26.857 | 175 | 116 | 5 | 36 | 204 | 336 | 504 | 3.29e-11 | 62.0 |
MsG0280007260.01.T01 | AT2G42850 | 30.631 | 111 | 71 | 2 | 68 | 178 | 353 | 457 | 3.33e-11 | 62.0 |
MsG0280007260.01.T01 | AT3G48280 | 27.826 | 115 | 82 | 1 | 65 | 178 | 342 | 456 | 4.11e-11 | 62.0 |
MsG0280007260.01.T01 | AT5G10610 | 32.456 | 114 | 73 | 4 | 65 | 177 | 350 | 460 | 4.18e-11 | 62.0 |
MsG0280007260.01.T01 | AT5G52320 | 27.007 | 137 | 98 | 2 | 71 | 205 | 366 | 502 | 5.20e-11 | 61.6 |
MsG0280007260.01.T01 | AT5G42590 | 29.808 | 104 | 71 | 1 | 88 | 189 | 374 | 477 | 7.93e-11 | 61.2 |
Find 48 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAATAATTAAATTTAAATT+TGG | 0.150818 | 2:+12705179 | None:intergenic |
TGAATAGTCATTACTAAATT+TGG | 0.170025 | 2:+12705555 | None:intergenic |
ACACTAATATGCGTTGTTAA+AGG | 0.214543 | 2:-12705128 | MsG0280007260.01.T01:three_prime_UTR |
TTATGTTGAAGCAAAATAAT+TGG | 0.233112 | 2:+12705795 | None:intergenic |
GAATAAAATTGTTATAGTTT+TGG | 0.254011 | 2:-12705082 | MsG0280007260.01.T01:three_prime_UTR |
GTTGGCAAAGATATAAAGTT+TGG | 0.266128 | 2:-12705855 | MsG0280007260.01.T01:CDS |
AAATCTACCATTTGTTGCTT+TGG | 0.272507 | 2:+12705710 | None:intergenic |
ATGAAGTGCGTGACACTTAA+TGG | 0.290423 | 2:-12705242 | MsG0280007260.01.T01:three_prime_UTR |
TAAATTTGGATAACAATAGA+TGG | 0.320553 | 2:+12705193 | None:intergenic |
TTCAACATAACAATGAACTA+TGG | 0.332986 | 2:-12705782 | MsG0280007260.01.T01:CDS |
GTTATTTCTCGAAACGCATT+TGG | 0.377764 | 2:-12706842 | MsG0280007260.01.T01:CDS |
GCACTGATATGATTAGCAAA+TGG | 0.429712 | 2:-12706937 | MsG0280007260.01.T01:CDS |
AGATTGTATCCACCTGCATT+TGG | 0.432958 | 2:-12705891 | MsG0280007260.01.T01:CDS |
TTCACTATTGGAAGCAAAGA+TGG | 0.441429 | 2:-12705637 | MsG0280007260.01.T01:CDS |
TGCTAAACGTTGAGTACAAA+TGG | 0.454479 | 2:+12705319 | None:intergenic |
TAGAACCTCGTACAAAATCA+TGG | 0.457849 | 2:+12705914 | None:intergenic |
TCAACATAACAATGAACTAT+GGG | 0.459154 | 2:-12705781 | MsG0280007260.01.T01:CDS |
CACTGATATGATTAGCAAAT+GGG | 0.461038 | 2:-12706936 | MsG0280007260.01.T01:CDS |
AATGACTATTCAGCCAGAAA+AGG | 0.465992 | 2:-12705544 | MsG0280007260.01.T01:CDS |
GGAATTTCCAAAGCAACAAA+TGG | 0.494078 | 2:-12705717 | MsG0280007260.01.T01:CDS |
TTTGGAGTATGAGCATAGGT+TGG | 0.499601 | 2:+12705573 | None:intergenic |
GATCAGGTGAAATAGACATA+TGG | 0.505098 | 2:-12706892 | MsG0280007260.01.T01:CDS |
TTTGGAAGTAGTTACGAAGA+AGG | 0.507891 | 2:-12706824 | MsG0280007260.01.T01:CDS |
GTGCAACTTGTGAGGAAACT+TGG | 0.512966 | 2:+12706956 | None:intergenic |
GTACAAATGGTATAGCTTAG+TGG | 0.516635 | 2:+12705332 | None:intergenic |
ATTCCATCAGCAAATCTCTC+AGG | 0.523232 | 2:+12705735 | None:intergenic |
CATGGAAGTACCTGCTGGAG+TGG | 0.525797 | 2:-12705829 | MsG0280007260.01.T01:CDS |
ATGACTATTCAGCCAGAAAA+GGG | 0.530494 | 2:-12705543 | MsG0280007260.01.T01:CDS |
AGAACCTCGTACAAAATCAT+GGG | 0.532420 | 2:+12705915 | None:intergenic |
AAGAAAACCTCCACTCCAGC+AGG | 0.537685 | 2:+12705819 | None:intergenic |
AGATATAAAGTTTGGAAACA+TGG | 0.544012 | 2:-12705847 | MsG0280007260.01.T01:CDS |
ACATTGTCTTCAGATGGATC+AGG | 0.548886 | 2:-12706908 | MsG0280007260.01.T01:CDS |
TTTGATCTTCAAAGAGAGCA+AGG | 0.558424 | 2:-12706792 | MsG0280007260.01.T01:intron |
TTTGGTGTTACTCGATATGT+TGG | 0.561527 | 2:-12705873 | MsG0280007260.01.T01:CDS |
TAAATTTGGAGTATGAGCAT+AGG | 0.569435 | 2:+12705569 | None:intergenic |
AACAAGTGTGAAGCACATCA+TGG | 0.581609 | 2:-12705297 | MsG0280007260.01.T01:three_prime_UTR |
GAGGCAACATTGTCTTCAGA+TGG | 0.583162 | 2:-12706914 | MsG0280007260.01.T01:CDS |
AATCCTGAGAGATTTGCTGA+TGG | 0.589596 | 2:-12705738 | MsG0280007260.01.T01:CDS |
GGAAACATGGAAGTACCTGC+TGG | 0.602391 | 2:-12705834 | MsG0280007260.01.T01:CDS |
ATTTGGATAACAATAGATGG+TGG | 0.614879 | 2:+12705196 | None:intergenic |
TCATATCAGTGCAACTTGTG+AGG | 0.621779 | 2:+12706948 | None:intergenic |
GGAAGTACCTGCTGGAGTGG+AGG | 0.635276 | 2:-12705826 | MsG0280007260.01.T01:CDS |
CGAGTAACACCAAATGCAGG+TGG | 0.637298 | 2:+12705882 | None:intergenic |
TATCGAGTAACACCAAATGC+AGG | 0.641498 | 2:+12705879 | None:intergenic |
TGATATGATTAGCAAATGGG+AGG | 0.667892 | 2:-12706933 | MsG0280007260.01.T01:CDS |
CAACATAACAATGAACTATG+GGG | 0.670836 | 2:-12705780 | MsG0280007260.01.T01:CDS |
TGTCACGCACTTCATGACAA+TGG | 0.691778 | 2:+12705250 | None:intergenic |
GAACCTCGTACAAAATCATG+GGG | 0.698612 | 2:+12705916 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTACAATATAAACTTTAT+GGG | + | Chr2:12706586-12706605 | None:intergenic | 10.0% |
!! | TAATTACAATATAAACTTTA+TGG | + | Chr2:12706587-12706606 | None:intergenic | 10.0% |
!! | TTCTAATATAGTGATATATT+AGG | - | Chr2:12705326-12705345 | MsG0280007260.01.T01:three_prime_UTR | 15.0% |
!!! | AGATTTATATATTTTCCATT+TGG | - | Chr2:12706320-12706339 | MsG0280007260.01.T01:intron | 15.0% |
!!! | GAATAAAATTGTTATAGTTT+TGG | - | Chr2:12706931-12706950 | MsG0280007260.01.T01:CDS | 15.0% |
!! | TAAATTTGGATAACAATAGA+TGG | + | Chr2:12706823-12706842 | None:intergenic | 20.0% |
!! | TGAATAGTCATTACTAAATT+TGG | + | Chr2:12706461-12706480 | None:intergenic | 20.0% |
!! | TTATGTTGAAGCAAAATAAT+TGG | + | Chr2:12706221-12706240 | None:intergenic | 20.0% |
!!! | AACTTTTTATCATAACTGTT+GGG | + | Chr2:12706961-12706980 | None:intergenic | 20.0% |
!!! | AGGAAGTATTACAAATATTT+TGG | - | Chr2:12705703-12705722 | MsG0280007260.01.T01:CDS | 20.0% |
!!! | ATGCAATTGTTTTTAAAACT+TGG | + | Chr2:12706008-12706027 | None:intergenic | 20.0% |
!!! | TAACTTTTTATCATAACTGT+TGG | + | Chr2:12706962-12706981 | None:intergenic | 20.0% |
!!! | TTATATATTTTCCATTTGGA+GGG | - | Chr2:12706324-12706343 | MsG0280007260.01.T01:intron | 20.0% |
!!! | TTCAAAAGATGCATTTTTAA+AGG | + | Chr2:12705811-12705830 | None:intergenic | 20.0% |
!!! | TTTATATATTTTCCATTTGG+AGG | - | Chr2:12706323-12706342 | MsG0280007260.01.T01:intron | 20.0% |
! | AGATATAAAGTTTGGAAACA+TGG | - | Chr2:12706166-12706185 | MsG0280007260.01.T01:intron | 25.0% |
! | GTTATTTAATCCTTCATAGT+CGG | + | Chr2:12705740-12705759 | None:intergenic | 25.0% |
! | TCAACATAACAATGAACTAT+GGG | - | Chr2:12706232-12706251 | MsG0280007260.01.T01:intron | 25.0% |
! | TGAAATCTTTAATCCCTTTA+TGG | - | Chr2:12705266-12705285 | MsG0280007260.01.T01:three_prime_UTR | 25.0% |
! | TTATTTAATCCTTCATAGTC+GGG | + | Chr2:12705739-12705758 | None:intergenic | 25.0% |
! | TTCAACATAACAATGAACTA+TGG | - | Chr2:12706231-12706250 | MsG0280007260.01.T01:intron | 25.0% |
!! | TATATATTTTCCATTTGGAG+GGG | - | Chr2:12706325-12706344 | MsG0280007260.01.T01:intron | 25.0% |
!! | TTCTTTTGTGTTTAGGAAAT+CGG | - | Chr2:12705979-12705998 | MsG0280007260.01.T01:intron | 25.0% |
AATCTTTAATCCCTTTATGG+AGG | - | Chr2:12705269-12705288 | MsG0280007260.01.T01:three_prime_UTR | 30.0% | |
ACACTAATATGCGTTGTTAA+AGG | - | Chr2:12706885-12706904 | MsG0280007260.01.T01:CDS | 30.0% | |
ATTTGGATAACAATAGATGG+TGG | + | Chr2:12706820-12706839 | None:intergenic | 30.0% | |
CAACATAACAATGAACTATG+GGG | - | Chr2:12706233-12706252 | MsG0280007260.01.T01:intron | 30.0% | |
CACTGATATGATTAGCAAAT+GGG | - | Chr2:12705077-12705096 | MsG0280007260.01.T01:three_prime_UTR | 30.0% | |
CATGGAAACAACAAGAATAT+GGG | - | Chr2:12705551-12705570 | MsG0280007260.01.T01:CDS | 30.0% | |
GTTGGCAAAGATATAAAGTT+TGG | - | Chr2:12706158-12706177 | MsG0280007260.01.T01:intron | 30.0% | |
TCATGGAAACAACAAGAATA+TGG | - | Chr2:12705550-12705569 | MsG0280007260.01.T01:CDS | 30.0% | |
TTCCATGATCTCTAATTTCT+TGG | + | Chr2:12705538-12705557 | None:intergenic | 30.0% | |
TTCCTAAACACAAAAGAACT+CGG | + | Chr2:12705977-12705996 | None:intergenic | 30.0% | |
! | AAATCTACCATTTGTTGCTT+TGG | + | Chr2:12706306-12706325 | None:intergenic | 30.0% |
! | AGCATCACAGTAAGATTTTA+AGG | - | Chr2:12706531-12706550 | MsG0280007260.01.T01:intron | 30.0% |
! | ATATATTTTCCATTTGGAGG+GGG | - | Chr2:12706326-12706345 | MsG0280007260.01.T01:intron | 30.0% |
! | TAAATTTGGAGTATGAGCAT+AGG | + | Chr2:12706447-12706466 | None:intergenic | 30.0% |
!! | ATCACTTGTCAAGTTTTGTA+GGG | + | Chr2:12705151-12705170 | None:intergenic | 30.0% |
!! | ATTAGTCTTACCTCCATAAA+GGG | + | Chr2:12705282-12705301 | None:intergenic | 30.0% |
AACAAAAAACCCGACTATGA+AGG | - | Chr2:12705727-12705746 | MsG0280007260.01.T01:CDS | 35.0% | |
AATGACTATTCAGCCAGAAA+AGG | - | Chr2:12706469-12706488 | MsG0280007260.01.T01:intron | 35.0% | |
AATGAGTCTTGAAGATGTAG+TGG | - | Chr2:12705574-12705593 | MsG0280007260.01.T01:CDS | 35.0% | |
ACCTAATAAGTCATTCTCAG+TGG | + | Chr2:12705495-12705514 | None:intergenic | 35.0% | |
AGAACCTCGTACAAAATCAT+GGG | + | Chr2:12706101-12706120 | None:intergenic | 35.0% | |
ATGACTATTCAGCCAGAAAA+GGG | - | Chr2:12706470-12706489 | MsG0280007260.01.T01:intron | 35.0% | |
ATGAGTCTTGAAGATGTAGT+GGG | - | Chr2:12705575-12705594 | MsG0280007260.01.T01:CDS | 35.0% | |
CACCAAGAAATTAGAGATCA+TGG | - | Chr2:12705533-12705552 | MsG0280007260.01.T01:CDS | 35.0% | |
CATGATCTCTAATTTCTTGG+TGG | + | Chr2:12705535-12705554 | None:intergenic | 35.0% | |
CTACTTCAACTATGCTTGTT+TGG | - | Chr2:12705632-12705651 | MsG0280007260.01.T01:CDS | 35.0% | |
GATCAGGTGAAATAGACATA+TGG | - | Chr2:12705121-12705140 | MsG0280007260.01.T01:three_prime_UTR | 35.0% | |
GGAATGCAAGTTATTCTACT+TGG | - | Chr2:12705597-12705616 | MsG0280007260.01.T01:CDS | 35.0% | |
GGAATTTCCAAAGCAACAAA+TGG | - | Chr2:12706296-12706315 | MsG0280007260.01.T01:intron | 35.0% | |
GGACAATGATATTGTTGAGT+AGG | - | Chr2:12705653-12705672 | MsG0280007260.01.T01:CDS | 35.0% | |
GTACAAATGGTATAGCTTAG+TGG | + | Chr2:12706684-12706703 | None:intergenic | 35.0% | |
TAGAACCTCGTACAAAATCA+TGG | + | Chr2:12706102-12706121 | None:intergenic | 35.0% | |
TGATATGATTAGCAAATGGG+AGG | - | Chr2:12705080-12705099 | MsG0280007260.01.T01:three_prime_UTR | 35.0% | |
TGCTAAACGTTGAGTACAAA+TGG | + | Chr2:12706697-12706716 | None:intergenic | 35.0% | |
TTCACTATTGGAAGCAAAGA+TGG | - | Chr2:12706376-12706395 | MsG0280007260.01.T01:intron | 35.0% | |
TTTGATCTTCAAAGAGAGCA+AGG | - | Chr2:12705221-12705240 | MsG0280007260.01.T01:three_prime_UTR | 35.0% | |
TTTGGAAGTAGTTACGAAGA+AGG | - | Chr2:12705189-12705208 | MsG0280007260.01.T01:three_prime_UTR | 35.0% | |
! | GATGGTGGCAAAAATATAGA+TGG | + | Chr2:12706805-12706824 | None:intergenic | 35.0% |
! | GCACTGATATGATTAGCAAA+TGG | - | Chr2:12705076-12705095 | MsG0280007260.01.T01:three_prime_UTR | 35.0% |
! | GCATCTTTTGAACTCGTTTA+AGG | - | Chr2:12705819-12705838 | MsG0280007260.01.T01:CDS | 35.0% |
! | GGGACAAAACTTTTCACTAT+TGG | - | Chr2:12706364-12706383 | MsG0280007260.01.T01:intron | 35.0% |
! | TACCGAGTTCTTTTGTGTTT+AGG | - | Chr2:12705972-12705991 | MsG0280007260.01.T01:intron | 35.0% |
!! | CATCACTTGTCAAGTTTTGT+AGG | + | Chr2:12705152-12705171 | None:intergenic | 35.0% |
!! | CTTTTGAACTCGTTTAAGGT+TGG | - | Chr2:12705823-12705842 | MsG0280007260.01.T01:CDS | 35.0% |
!! | GATTAGTCTTACCTCCATAA+AGG | + | Chr2:12705283-12705302 | None:intergenic | 35.0% |
!! | GTTATTTCTCGAAACGCATT+TGG | - | Chr2:12705171-12705190 | MsG0280007260.01.T01:three_prime_UTR | 35.0% |
!! | TTTGGTGTTACTCGATATGT+TGG | - | Chr2:12706140-12706159 | MsG0280007260.01.T01:intron | 35.0% |
AACAAGTGTGAAGCACATCA+TGG | - | Chr2:12706716-12706735 | MsG0280007260.01.T01:intron | 40.0% | |
ACATTGTCTTCAGATGGATC+AGG | - | Chr2:12705105-12705124 | MsG0280007260.01.T01:three_prime_UTR | 40.0% | |
ACCTGTAGGTGCAAGAAAAA+TGG | + | Chr2:12706660-12706679 | None:intergenic | 40.0% | |
AGATTGTATCCACCTGCATT+TGG | - | Chr2:12706122-12706141 | MsG0280007260.01.T01:intron | 40.0% | |
ATGAAGTGCGTGACACTTAA+TGG | - | Chr2:12706771-12706790 | MsG0280007260.01.T01:intron | 40.0% | |
ATTCCATCAGCAAATCTCTC+AGG | + | Chr2:12706281-12706300 | None:intergenic | 40.0% | |
CAAGAGAGAGAAAGCAATGA+AGG | - | Chr2:12705460-12705479 | MsG0280007260.01.T01:intron | 40.0% | |
GAACCTCGTACAAAATCATG+GGG | + | Chr2:12706100-12706119 | None:intergenic | 40.0% | |
GCAAGTTATTCTACTTGGCA+GGG | - | Chr2:12705602-12705621 | MsG0280007260.01.T01:CDS | 40.0% | |
GCCACTGAGAATGACTTATT+AGG | - | Chr2:12705491-12705510 | MsG0280007260.01.T01:exon | 40.0% | |
TATAGCTTAGTGGTACCTGT+AGG | + | Chr2:12706674-12706693 | None:intergenic | 40.0% | |
TATCGAGTAACACCAAATGC+AGG | + | Chr2:12706137-12706156 | None:intergenic | 40.0% | |
TCATATCAGTGCAACTTGTG+AGG | + | Chr2:12705068-12705087 | None:intergenic | 40.0% | |
TGAGTCTTGAAGATGTAGTG+GGG | - | Chr2:12705576-12705595 | MsG0280007260.01.T01:CDS | 40.0% | |
TGCAAGTTATTCTACTTGGC+AGG | - | Chr2:12705601-12705620 | MsG0280007260.01.T01:CDS | 40.0% | |
! | ATAACATGAGCACCCTTTTC+TGG | + | Chr2:12706485-12706504 | None:intergenic | 40.0% |
! | TTTGGAGTATGAGCATAGGT+TGG | + | Chr2:12706443-12706462 | None:intergenic | 40.0% |
! | TTTTGTCCCATACAGACTCT+AGG | + | Chr2:12706353-12706372 | None:intergenic | 40.0% |
!! | AATCCTGAGAGATTTGCTGA+TGG | - | Chr2:12706275-12706294 | MsG0280007260.01.T01:intron | 40.0% |
!! | AGTCATACTCTGGCTTTAGT+CGG | - | Chr2:12705936-12705955 | MsG0280007260.01.T01:intron | 40.0% |
!! | CTTGTCAAGTTTTGTAGGGA+AGG | + | Chr2:12705147-12705166 | None:intergenic | 40.0% |
AAGATCTCAAGCCAACCACT+AGG | + | Chr2:12705849-12705868 | None:intergenic | 45.0% | |
AGAGAGAAAGCAATGAAGGC+AGG | - | Chr2:12705464-12705483 | MsG0280007260.01.T01:intron | 45.0% | |
ATACCTACCGCTCTACTCAA+AGG | - | Chr2:12705385-12705404 | MsG0280007260.01.T01:intron | 45.0% | |
CTTGGAGTTTGCACATCTCA+AGG | - | Chr2:12705866-12705885 | MsG0280007260.01.T01:CDS | 45.0% | |
GAGGCAACATTGTCTTCAGA+TGG | - | Chr2:12705099-12705118 | MsG0280007260.01.T01:three_prime_UTR | 45.0% | |
GTGCAACTTGTGAGGAAACT+TGG | + | Chr2:12705060-12705079 | None:intergenic | 45.0% | |
TGTCACGCACTTCATGACAA+TGG | + | Chr2:12706766-12706785 | None:intergenic | 45.0% | |
TGTTGAGTAGGTACCCTGAT+TGG | - | Chr2:12705665-12705684 | MsG0280007260.01.T01:CDS | 45.0% | |
TTGCACGTTCTTGCCAATCA+GGG | + | Chr2:12705681-12705700 | None:intergenic | 45.0% | |
TTTGCACATCTCAAGGTCTC+AGG | - | Chr2:12705873-12705892 | MsG0280007260.01.T01:CDS | 45.0% | |
! | GCTTTAGTCGGTTCTTGGAT+CGG | - | Chr2:12705948-12705967 | MsG0280007260.01.T01:intron | 45.0% |
!! | TAGTGGTTGGCTTGAGATCT+TGG | - | Chr2:12705848-12705867 | MsG0280007260.01.T01:CDS | 45.0% |
!! | TTTAAGGTTGGCCTAGTGGT+TGG | - | Chr2:12705835-12705854 | MsG0280007260.01.T01:CDS | 45.0% |
!!! | GCCATTTTTCTTGCACCTAC+AGG | - | Chr2:12706656-12706675 | MsG0280007260.01.T01:intron | 45.0% |
!! | TAAAAATATATAAACTTTAT+TGG | - | Chr2:12706036-12706055 | MsG0280007260.01.T01:intron | 5.0% |
!! | TGAATAATTAAATTTAAATT+TGG | + | Chr2:12706837-12706856 | None:intergenic | 5.0% |
AACTTAACACCAAGGGCCAG+GGG | + | Chr2:12705907-12705926 | None:intergenic | 50.0% | |
AAGAAAACCTCCACTCCAGC+AGG | + | Chr2:12706197-12706216 | None:intergenic | 50.0% | |
ATTGGCAAGAACGTGCAAGG+AGG | - | Chr2:12705683-12705702 | MsG0280007260.01.T01:CDS | 50.0% | |
CCCGCTGAACTTAACACCAA+GGG | + | Chr2:12705914-12705933 | None:intergenic | 50.0% | |
CGAGTAACACCAAATGCAGG+TGG | + | Chr2:12706134-12706153 | None:intergenic | 50.0% | |
CTGATTGGCAAGAACGTGCA+AGG | - | Chr2:12705680-12705699 | MsG0280007260.01.T01:CDS | 50.0% | |
CTTGCACGTTCTTGCCAATC+AGG | + | Chr2:12705682-12705701 | None:intergenic | 50.0% | |
GAACTTAACACCAAGGGCCA+GGG | + | Chr2:12705908-12705927 | None:intergenic | 50.0% | |
GCATCCTCCTTTGAGTAGAG+CGG | + | Chr2:12705395-12705414 | None:intergenic | 50.0% | |
TGAACTTAACACCAAGGGCC+AGG | + | Chr2:12705909-12705928 | None:intergenic | 50.0% | |
! | GCTCCCCATGATTTTGTACG+AGG | - | Chr2:12706094-12706113 | MsG0280007260.01.T01:intron | 50.0% |
!! | CCCTTGGTGTTAAGTTCAGC+GGG | - | Chr2:12705911-12705930 | MsG0280007260.01.T01:CDS | 50.0% |
!! | CTCGTTTAAGGTTGGCCTAG+TGG | - | Chr2:12705831-12705850 | MsG0280007260.01.T01:CDS | 50.0% |
!! | CTCTGGCTTTAGTCGGTTCT+TGG | - | Chr2:12705943-12705962 | MsG0280007260.01.T01:intron | 50.0% |
!! | GCCCTTGGTGTTAAGTTCAG+CGG | - | Chr2:12705910-12705929 | MsG0280007260.01.T01:CDS | 50.0% |
!! | GGAAACATGGAAGTACCTGC+TGG | - | Chr2:12706179-12706198 | MsG0280007260.01.T01:intron | 50.0% |
ACTTAACACCAAGGGCCAGG+GGG | + | Chr2:12705906-12705925 | None:intergenic | 55.0% | |
AGGGGGTCCTAGAGTCTGTA+TGG | - | Chr2:12706343-12706362 | MsG0280007260.01.T01:intron | 55.0% | |
CCTACCGCTCTACTCAAAGG+AGG | - | Chr2:12705388-12705407 | MsG0280007260.01.T01:intron | 55.0% | |
CCTCCTTTGAGTAGAGCGGT+AGG | + | Chr2:12705391-12705410 | None:intergenic | 55.0% | |
GCCCGCTGAACTTAACACCA+AGG | + | Chr2:12705915-12705934 | None:intergenic | 55.0% | |
GGGGGTCCTAGAGTCTGTAT+GGG | - | Chr2:12706344-12706363 | MsG0280007260.01.T01:intron | 55.0% | |
GTCTCAGGTTTGATTCCCCC+TGG | - | Chr2:12705888-12705907 | MsG0280007260.01.T01:CDS | 55.0% | |
TCAGCGGGCAAGTCATACTC+TGG | - | Chr2:12705926-12705945 | MsG0280007260.01.T01:intron | 55.0% | |
!! | ACTCTAGGACCCCCTCCAAA+TGG | + | Chr2:12706338-12706357 | None:intergenic | 55.0% |
!! | CATGGAAGTACCTGCTGGAG+TGG | - | Chr2:12706184-12706203 | MsG0280007260.01.T01:intron | 55.0% |
GTTTGATTCCCCCTGGCCCT+TGG | - | Chr2:12705895-12705914 | MsG0280007260.01.T01:CDS | 60.0% | |
!! | GGAAGTACCTGCTGGAGTGG+AGG | - | Chr2:12706187-12706206 | MsG0280007260.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 12705051 | 12706984 | 12705051 | ID=MsG0280007260.01;Name=MsG0280007260.01 |
Chr2 | mRNA | 12705051 | 12706984 | 12705051 | ID=MsG0280007260.01.T01;Parent=MsG0280007260.01;Name=MsG0280007260.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0.5|0.66|1|0.5|0.33|3|333|207 |
Chr2 | exon | 12705051 | 12705357 | 12705051 | ID=MsG0280007260.01.T01:exon:521;Parent=MsG0280007260.01.T01 |
Chr2 | exon | 12705483 | 12705940 | 12705483 | ID=MsG0280007260.01.T01:exon:520;Parent=MsG0280007260.01.T01 |
Chr2 | exon | 12706793 | 12706984 | 12706793 | ID=MsG0280007260.01.T01:exon:519;Parent=MsG0280007260.01.T01 |
Chr2 | CDS | 12706793 | 12706984 | 12706793 | ID=MsG0280007260.01.T01:cds;Parent=MsG0280007260.01.T01 |
Chr2 | CDS | 12705509 | 12705940 | 12705509 | ID=MsG0280007260.01.T01:cds;Parent=MsG0280007260.01.T01 |
Chr2 | three_prime_UTR | 12705483 | 12705508 | 12705483 | ID=MsG0280007260.01.T01:three_prime_utr;Parent=MsG0280007260.01.T01 |
Chr2 | three_prime_UTR | 12705051 | 12705357 | 12705051 | ID=MsG0280007260.01.T01:three_prime_utr;Parent=MsG0280007260.01.T01 |
Gene Sequence |
Protein sequence |