AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023783.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023783.01.T01 MTR_8g102190 67.905 377 25 4 1 289 1 369 1.47e-163 461
MsG0480023783.01.T01 MTR_8g102190 67.905 377 25 4 1 289 1 369 4.87e-163 463
MsG0480023783.01.T01 MTR_8g102190 96.154 52 2 0 276 327 424 475 4.92e-25 105
MsG0480023783.01.T01 MTR_8g102190 69.041 365 17 4 1 277 1 357 2.16e-162 458
MsG0480023783.01.T01 MTR_6g090130 58.221 371 58 5 7 289 4 365 1.19e-132 387
MsG0480023783.01.T01 MTR_3g110395 56.793 368 74 5 3 288 4 368 2.46e-126 372
MsG0480023783.01.T01 MTR_2g100710 52.299 348 70 4 18 277 18 357 1.87e-108 321
MsG0480023783.01.T01 MTR_2g100710 52.299 348 70 4 18 277 18 357 8.03e-108 322
MsG0480023783.01.T01 MTR_1g090300 48.159 353 78 6 17 277 84 423 3.54e-96 295
MsG0480023783.01.T01 MTR_4g134290 38.776 343 118 7 20 278 27 361 1.62e-67 219
MsG0480023783.01.T01 MTR_8g069040 38.007 271 78 5 92 278 170 434 1.57e-45 162
MsG0480023783.01.T01 MTR_5g032570 36.296 270 82 5 92 277 174 437 6.61e-42 152
MsG0480023783.01.T01 MTR_2g066850 69.643 56 16 1 133 188 407 461 1.53e-13 72.0
MsG0480023783.01.T01 MTR_2g100670 59.184 49 20 0 231 279 61 109 5.65e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023783.01.T01 AT4G26270 55.313 367 63 5 1 277 1 356 1.40e-123 363
MsG0480023783.01.T01 AT5G56630 55.342 365 65 5 1 277 1 355 6.40e-120 354
MsG0480023783.01.T01 AT5G56630 74.419 43 11 0 278 320 423 465 1.68e-11 65.5
MsG0480023783.01.T01 AT4G29220 53.463 361 76 4 3 277 4 358 1.46e-117 347
MsG0480023783.01.T01 AT4G32840 50.505 396 96 7 10 313 11 398 1.01e-113 337
MsG0480023783.01.T01 AT5G61580 48.442 353 77 6 17 277 68 407 1.67e-99 303
MsG0480023783.01.T01 AT5G61580 48.442 353 77 6 17 277 68 407 1.70e-99 303
MsG0480023783.01.T01 AT5G47810 38.304 342 110 6 30 277 7 341 1.07e-63 208
MsG0480023783.01.T01 AT2G22480 38.376 271 77 5 92 278 178 442 6.96e-46 163

Find 105 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCAACACCTTCAACTTA+TGG 0.240478 4:+89784307 None:intergenic
CAATTTCAGGTTTATATAAT+AGG 0.242241 4:-89785198 MsG0480023783.01.T01:intron
CATTCAAAGGTATAATATAA+TGG 0.259338 4:+89787200 None:intergenic
CACAAGCAGCAGGATGCTTC+TGG 0.291444 4:-89784366 MsG0480023783.01.T01:CDS
CTGGTCTCAACACCGTTATT+AGG 0.296986 4:-89785691 MsG0480023783.01.T01:CDS
TCAAAGCCTAAAATTGTTAG+AGG 0.297441 4:-89787044 MsG0480023783.01.T01:CDS
AGCTCTCCACGGACATCTTA+TGG 0.305461 4:+89782922 None:intergenic
TTTCGTCGTAATTATTGAAT+AGG 0.314802 4:+89787131 None:intergenic
TTCTTCAAGATGTTGGACTA+TGG 0.331798 4:-89784335 MsG0480023783.01.T01:CDS
ACTGCTACTGAGTAGTGATA+TGG 0.334902 4:-89787081 MsG0480023783.01.T01:exon
GAGTGATTCACGAAGGAAAA+AGG 0.335181 4:+89787161 None:intergenic
TATGGCGTCAAGAAAGTATT+AGG 0.339409 4:-89785641 MsG0480023783.01.T01:CDS
CCCTCTTGGACTATCTTTGT+TGG 0.340897 4:+89785882 None:intergenic
GAGAGAAGGCTAAAAGAAAA+TGG 0.369087 4:-89784456 MsG0480023783.01.T01:CDS
AATCAACACCTTCAACTTAT+GGG 0.387680 4:+89784308 None:intergenic
CGACGACGTACTGGTAAATC+TGG 0.393095 4:+89786972 None:intergenic
CCTGCTGCTTGTGCATGGAT+TGG 0.398659 4:+89784376 None:intergenic
ATTCAAAGGTATAATATAAT+GGG 0.400872 4:+89787201 None:intergenic
TTCGTCGTAATTATTGAATA+GGG 0.403548 4:+89787132 None:intergenic
CTTTCTTGACGCCATACATA+TGG 0.405194 4:+89785648 None:intergenic
TGGTCTCAACACCGTTATTA+GGG 0.405636 4:-89785690 MsG0480023783.01.T01:CDS
AACAAACTTCTTCAAGATGT+TGG 0.415670 4:-89784342 MsG0480023783.01.T01:CDS
CGCCGAAAATGTATCCCTCT+TGG 0.417477 4:+89785868 None:intergenic
AACGATAGATAACGACATTC+CGG 0.425629 4:-89784988 MsG0480023783.01.T01:intron
TTCCTTCTTCTTCTCTTCAA+CGG 0.430663 4:+89783138 None:intergenic
GGTCTCAAGGTTGCAGTTGT+AGG 0.434255 4:-89785020 MsG0480023783.01.T01:CDS
CGATGACAGTGTTCCTCAAA+AGG 0.434629 4:-89786623 MsG0480023783.01.T01:CDS
TGGTAAATCTGGAATGTAAT+CGG 0.438642 4:+89786983 None:intergenic
GAAAGTGTTGAAAACGGAAT+AGG 0.440666 4:-89784765 MsG0480023783.01.T01:CDS
AATAGGTGTTGTCAAGTTGA+TGG 0.445015 4:-89784748 MsG0480023783.01.T01:CDS
CGGCTTTGACACAGCTGTTG+AGG 0.452847 4:-89784826 MsG0480023783.01.T01:CDS
TAGGTTATTGACAAGTCCTT+CGG 0.454297 4:-89784846 MsG0480023783.01.T01:CDS
AAAGTCGTTTGTAGATGAAT+CGG 0.479262 4:+89782823 None:intergenic
CAAGGTCGAGGCTAAAATGA+TGG 0.480670 4:+89783007 None:intergenic
AACTTACTTGACAACTGAAT+AGG 0.487126 4:+89786757 None:intergenic
CTGCTACTGAGTAGTGATAT+GGG 0.487486 4:-89787080 MsG0480023783.01.T01:exon
CTAACAAAACGGAGATAGAA+AGG 0.493583 4:+89787106 None:intergenic
AGAAGATTCATTTAATCTGT+AGG 0.494275 4:-89783107 MsG0480023783.01.T01:exon
GTTATTAGGGAGTTAGTATG+TGG 0.496614 4:-89785677 MsG0480023783.01.T01:CDS
AATTCAAATGATTATCATAC+GGG 0.496880 4:+89782856 None:intergenic
AGCATCCTGCTGCTTGTGCA+TGG 0.502680 4:+89784371 None:intergenic
TGTGGTTTATACCATATGTA+TGG 0.503323 4:-89785659 MsG0480023783.01.T01:CDS
GGCGTGCCGGACTCGTCAAA+AGG 0.505128 4:-89785849 MsG0480023783.01.T01:intron
AAATTCAAATGATTATCATA+CGG 0.505765 4:+89782855 None:intergenic
CCAATCCATGCACAAGCAGC+AGG 0.508389 4:-89784376 MsG0480023783.01.T01:CDS
GATTGCTGAAGGAGCAGGAC+AGG 0.511673 4:-89784418 MsG0480023783.01.T01:CDS
TAACCGATCGAATGTGGGCT+AGG 0.515770 4:-89783207 MsG0480023783.01.T01:CDS
ATGGATATCCCATAAGTTGA+AGG 0.517124 4:-89784316 MsG0480023783.01.T01:intron
TTTCAGGTTTATATAATAGG+AGG 0.517903 4:-89785195 MsG0480023783.01.T01:intron
ATTGTGATTGCTGAAGGAGC+AGG 0.519189 4:-89784423 MsG0480023783.01.T01:CDS
CAAGTTACCGTTACAACACA+AGG 0.519736 4:+89782989 None:intergenic
CGTGAATGTATCACATTCAA+AGG 0.520936 4:+89787187 None:intergenic
CCACGGACATCTTATGGATG+TGG 0.529555 4:+89782928 None:intergenic
TAGTGATAACCGATCGAATG+TGG 0.534224 4:-89783213 MsG0480023783.01.T01:CDS
TGATTTGGGTTGAGTAGCAA+TGG 0.535472 4:-89787274 MsG0480023783.01.T01:five_prime_UTR
TTTGTTAACAAAACAGTTGG+CGG 0.539588 4:-89783061 MsG0480023783.01.T01:three_prime_UTR
GTTTATATAATAGGAGGAGA+TGG 0.543174 4:-89785189 MsG0480023783.01.T01:CDS
GCCTCGACCTTGTGTTGTAA+CGG 0.546199 4:-89782996 MsG0480023783.01.T01:three_prime_UTR
ACATACTAACTCCCTAATAA+CGG 0.547174 4:+89785679 None:intergenic
AGGAGGAGATGGAACTCAGA+GGG 0.547255 4:-89785178 MsG0480023783.01.T01:CDS
TTGCTACTCAACCCAAATCA+AGG 0.547535 4:+89787277 None:intergenic
CTTCTTCTTCTCTTCAACGG+CGG 0.554022 4:+89783141 None:intergenic
CGCCGTTGAAGAGAAGAAGA+AGG 0.554186 4:-89783140 MsG0480023783.01.T01:CDS
GATTAGAAGAGGAGAATGAA+TGG 0.554285 4:+89787226 None:intergenic
AAAATTGTTAGAGGCTCCGC+TGG 0.554480 4:-89787035 MsG0480023783.01.T01:CDS
AATTAGAAACCGTGGTCTCA+AGG 0.554898 4:-89785033 MsG0480023783.01.T01:CDS
CTAATAACGGTGTTGAGACC+AGG 0.555952 4:+89785692 None:intergenic
ACATGTGGAGGTTTATGTCC+TGG 0.556306 4:-89785710 MsG0480023783.01.T01:CDS
TAGGCAGGATTGTCTTGCAA+TGG 0.561212 4:+89786776 None:intergenic
CTTTGACACAGCTGTTGAGG+AGG 0.569026 4:-89784823 MsG0480023783.01.T01:CDS
GCCAACAAAGATAGTCCAAG+AGG 0.569223 4:-89785883 MsG0480023783.01.T01:CDS
TTGTTAACAAAACAGTTGGC+GGG 0.571329 4:-89783060 MsG0480023783.01.T01:three_prime_UTR
ATAGGTGTTGTCAAGTTGAT+GGG 0.573864 4:-89784747 MsG0480023783.01.T01:CDS
GGAATGTAATCGGTTAAATG+AGG 0.576489 4:+89786993 None:intergenic
CAGGAAACTTACCACTGTAT+CGG 0.579399 4:+89784724 None:intergenic
TACTTGACAACTGAATAGGC+AGG 0.587228 4:+89786761 None:intergenic
AGTAGCAGTAGCTAACAAAA+CGG 0.590627 4:+89787095 None:intergenic
GAAGCTGAAAGTGTTGAAAA+CGG 0.594450 4:-89784771 MsG0480023783.01.T01:CDS
AAGGTCGAGGCTAAAATGAT+GGG 0.595025 4:+89783008 None:intergenic
CAAAGGTATAATATAATGGG+TGG 0.603745 4:+89787204 None:intergenic
GCTGCCATTGTGACATGTGG+AGG 0.605863 4:-89785722 MsG0480023783.01.T01:CDS
TATAATGGGTGGATTAGAAG+AGG 0.607323 4:+89787215 None:intergenic
AACAGCTGTGTCAAAGCCGA+AGG 0.608023 4:+89784830 None:intergenic
TTAAATGAGGAACATCTTCG+AGG 0.616676 4:+89787006 None:intergenic
ACCGTTACAACACAAGGTCG+AGG 0.617342 4:+89782995 None:intergenic
ATGGTTATTGTGATTGCTGA+AGG 0.618393 4:-89784429 MsG0480023783.01.T01:CDS
CAACTGCAACCTTGAGACCA+CGG 0.620649 4:+89785024 None:intergenic
AAGCCTAGCCCACATTCGAT+CGG 0.620731 4:+89783204 None:intergenic
GACATCTTATGGATGTGGAA+AGG 0.622603 4:+89782933 None:intergenic
GCTAAAAGAAAATGGCCACA+TGG 0.633855 4:-89784448 MsG0480023783.01.T01:CDS
ATGTAGAGCTGAGCTCTCCA+CGG 0.634095 4:+89782911 None:intergenic
AAGTTGATGGGCCGATACAG+TGG 0.643563 4:-89784735 MsG0480023783.01.T01:intron
GTGGTGCAGAGAATCAATGA+AGG 0.644057 4:-89783247 MsG0480023783.01.T01:intron
AGTGATAACCGATCGAATGT+GGG 0.645984 4:-89783212 MsG0480023783.01.T01:CDS
CCAACAAAGATAGTCCAAGA+GGG 0.648453 4:-89785882 MsG0480023783.01.T01:CDS
TAAACCTCCACATGTCACAA+TGG 0.653142 4:+89785718 None:intergenic
CAGGCTGCCATTGTGACATG+TGG 0.653226 4:-89785725 MsG0480023783.01.T01:CDS
CCACATCCATAAGATGTCCG+TGG 0.655280 4:-89782928 MsG0480023783.01.T01:three_prime_UTR
TCATAGGAAATTAGAAACCG+TGG 0.660254 4:-89785041 MsG0480023783.01.T01:intron
GGTCGTATTTATAGTAAACG+TGG 0.687789 4:+89787247 None:intergenic
ATCTTCGAGGATATAACCAG+CGG 0.701644 4:+89787019 None:intergenic
GGAGGAGATGGAACTCAGAG+GGG 0.709597 4:-89785177 MsG0480023783.01.T01:CDS
TAGGAGGAGATGGAACTCAG+AGG 0.715955 4:-89785179 MsG0480023783.01.T01:CDS
GATTAGTGAGTGATTCACGA+AGG 0.719306 4:+89787154 None:intergenic
CAGCAATCACAATAACCATG+TGG 0.741689 4:+89784433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATGAATAAAAATAAATT+AGG + Chr4:89783417-89783436 None:intergenic 10.0%
!!! AATTACTATTTTTAATGATT+AGG + Chr4:89783633-89783652 None:intergenic 10.0%
!!! GTTATATTTTCTTTTATTTT+GGG - Chr4:89783518-89783537 MsG0480023783.01.T01:intron 10.0%
!!! TTATATTTTCTTTTATTTTG+GGG - Chr4:89783519-89783538 MsG0480023783.01.T01:intron 10.0%
!! AAATTCAAATGATTATCATA+CGG + Chr4:89787267-89787286 None:intergenic 15.0%
!!! ATTCAAAGGTATAATATAAT+GGG + Chr4:89782921-89782940 None:intergenic 15.0%
!!! GGTTATATTTTCTTTTATTT+TGG - Chr4:89783517-89783536 MsG0480023783.01.T01:intron 15.0%
!! AAAAAACAATTTATCCTCAT+AGG - Chr4:89785062-89785081 MsG0480023783.01.T01:intron 20.0%
!! AATTCAAATGATTATCATAC+GGG + Chr4:89787266-89787285 None:intergenic 20.0%
!! ACAGTATAAATTGTATATTC+AGG - Chr4:89784348-89784367 MsG0480023783.01.T01:CDS 20.0%
!! CAAAATACATAGGAATTATT+TGG - Chr4:89786701-89786720 MsG0480023783.01.T01:intron 20.0%
!! GTAAGAATTACTAACATTAT+GGG + Chr4:89786218-89786237 None:intergenic 20.0%
!! GTTAGTAATTCTTACAAATA+AGG - Chr4:89786223-89786242 MsG0480023783.01.T01:intron 20.0%
!! TAAAGAAAGCAAATAGAATA+TGG - Chr4:89785491-89785510 MsG0480023783.01.T01:intron 20.0%
!! TAATCTTAAAATCGTATCAT+AGG - Chr4:89783841-89783860 MsG0480023783.01.T01:intron 20.0%
!! TGTAAGAATTACTAACATTA+TGG + Chr4:89786219-89786238 None:intergenic 20.0%
!! TTAAAATGTATTCATGAATG+TGG - Chr4:89783874-89783893 MsG0480023783.01.T01:intron 20.0%
!!! AAAGAAAATATAACCTTTTG+AGG + Chr4:89783512-89783531 None:intergenic 20.0%
!!! ACATTTAAAACTCATCAAAA+TGG + Chr4:89786044-89786063 None:intergenic 20.0%
!!! CAATTTCAGGTTTATATAAT+AGG - Chr4:89784921-89784940 MsG0480023783.01.T01:intron 20.0%
!!! CATTCAAAGGTATAATATAA+TGG + Chr4:89782922-89782941 None:intergenic 20.0%
!!! TTTATTTTGGGGTAAATTTT+CGG - Chr4:89783530-89783549 MsG0480023783.01.T01:intron 20.0%
!!! TTTTGAGGTATTAAACTTTT+AGG - Chr4:89784977-89784996 MsG0480023783.01.T01:intron 20.0%
! ACCATGTTATATACTAATGA+AGG + Chr4:89783598-89783617 None:intergenic 25.0%
! AGAAGATTCATTTAATCTGT+AGG - Chr4:89787012-89787031 MsG0480023783.01.T01:CDS 25.0%
! ATACTCTCAAATATATAGGT+TGG - Chr4:89786388-89786407 MsG0480023783.01.T01:intron 25.0%
! ATATAAATTGGGTCAATTTC+AGG - Chr4:89784908-89784927 MsG0480023783.01.T01:intron 25.0%
! ATGTTATATACTAATGAAGG+AGG + Chr4:89783595-89783614 None:intergenic 25.0%
! CAATAATCTGTTAAACAAAG+AGG + Chr4:89784217-89784236 None:intergenic 25.0%
! CTATTTGCTTTCTTTAAATG+AGG + Chr4:89785487-89785506 None:intergenic 25.0%
! TAAACAGATAAAATCACACA+TGG + Chr4:89784303-89784322 None:intergenic 25.0%
! TATCTGTTCTGATAAATAGA+AGG + Chr4:89784855-89784874 None:intergenic 25.0%
! TCCTTCATTAGTATATAACA+TGG - Chr4:89783594-89783613 MsG0480023783.01.T01:intron 25.0%
! TTATATAAGATCAGCGTAAT+TGG + Chr4:89783824-89783843 None:intergenic 25.0%
! TTCGTCGTAATTATTGAATA+GGG + Chr4:89782990-89783009 None:intergenic 25.0%
! TTTCGTCGTAATTATTGAAT+AGG + Chr4:89782991-89783010 None:intergenic 25.0%
!! AATGATACATAAGATTAGCT+AGG + Chr4:89783234-89783253 None:intergenic 25.0%
!! ATGTATATCATTACGGTTTT+CGG + Chr4:89784732-89784751 None:intergenic 25.0%
!! ATGTGTGATTTTATCTGTTT+AGG - Chr4:89784302-89784321 MsG0480023783.01.T01:intron 25.0%
!! CATTTTGTTAACAAAACAGT+TGG - Chr4:89787055-89787074 MsG0480023783.01.T01:CDS 25.0%
!! TCTTTAGTACAACTTTTGTA+AGG + Chr4:89786101-89786120 None:intergenic 25.0%
!! TTATGTTGTAAGATCTTTTG+AGG + Chr4:89784081-89784100 None:intergenic 25.0%
!! TTTTAAATCAGATGAAGTTC+AGG - Chr4:89784375-89784394 MsG0480023783.01.T01:CDS 25.0%
!!! ACAATTTTAGGCTTTGAATT+TGG + Chr4:89783072-89783091 None:intergenic 25.0%
!!! CAACTGTTTTGTTAACAAAA+TGG + Chr4:89787057-89787076 None:intergenic 25.0%
!!! GTGTTCCTTTTAATTTACTA+GGG + Chr4:89785465-89785484 None:intergenic 25.0%
!!! TGTTCCTTTTAATTTACTAG+GGG + Chr4:89785464-89785483 None:intergenic 25.0%
!!! TTTCAGGTTTATATAATAGG+AGG - Chr4:89784924-89784943 MsG0480023783.01.T01:intron 25.0%
AAACAAAACATGATATTGCC+AGG - Chr4:89783668-89783687 MsG0480023783.01.T01:intron 30.0%
AAATAATCCTGCTACATCAA+AGG + Chr4:89786346-89786365 None:intergenic 30.0%
AAATCAACACCTTCAACTTA+TGG + Chr4:89785815-89785834 None:intergenic 30.0%
AACAAAACATGATATTGCCA+GGG - Chr4:89783669-89783688 MsG0480023783.01.T01:intron 30.0%
AACAAACTTCTTCAAGATGT+TGG - Chr4:89785777-89785796 MsG0480023783.01.T01:intron 30.0%
AACTTACTTGACAACTGAAT+AGG + Chr4:89783365-89783384 None:intergenic 30.0%
AAGTCATTCTGAATAGGATT+AGG - Chr4:89786776-89786795 MsG0480023783.01.T01:CDS 30.0%
AATACTGTCAACTATCTTAG+TGG + Chr4:89784801-89784820 None:intergenic 30.0%
AATCAACACCTTCAACTTAT+GGG + Chr4:89785814-89785833 None:intergenic 30.0%
ACATACTAACTCCCTAATAA+CGG + Chr4:89784443-89784462 None:intergenic 30.0%
AGAAGTTTCTGCATAAACAT+GGG + Chr4:89783725-89783744 None:intergenic 30.0%
AGTTAGTTATGCACAAAGTA+CGG + Chr4:89783947-89783966 None:intergenic 30.0%
AGTTGACAGTATTCAAGATA+GGG - Chr4:89784808-89784827 MsG0480023783.01.T01:CDS 30.0%
ATCACTTTATAAGTAGCTTG+TGG - Chr4:89786158-89786177 MsG0480023783.01.T01:intron 30.0%
ATGGACATGAATGTAATGTA+AGG + Chr4:89785940-89785959 None:intergenic 30.0%
ATTGACCCAATTTATATGTC+TGG + Chr4:89784905-89784924 None:intergenic 30.0%
CAATCCCCTAGTAAATTAAA+AGG - Chr4:89785457-89785476 MsG0480023783.01.T01:intron 30.0%
CACGCTTATGTATATCATTA+CGG + Chr4:89784739-89784758 None:intergenic 30.0%
CATTACATTCATGTCCATTT+AGG - Chr4:89785942-89785961 MsG0480023783.01.T01:intron 30.0%
CTTACAACATAACTTTGTTG+AGG - Chr4:89784089-89784108 MsG0480023783.01.T01:intron 30.0%
GAAATGACAAATATCACTCT+AGG + Chr4:89786673-89786692 None:intergenic 30.0%
GATAACAAGTCATTCTGAAT+AGG - Chr4:89786770-89786789 MsG0480023783.01.T01:CDS 30.0%
GCATAACTAACTTCCATAAA+AGG - Chr4:89783955-89783974 MsG0480023783.01.T01:intron 30.0%
GGGTATACTCTCAAATATAT+AGG - Chr4:89786384-89786403 MsG0480023783.01.T01:intron 30.0%
GTCTTAGCAATCAAAAAACT+GGG + Chr4:89786959-89786978 None:intergenic 30.0%
GTTAACGAACTCACATTAAA+GGG + Chr4:89786651-89786670 None:intergenic 30.0%
GTTTATATAATAGGAGGAGA+TGG - Chr4:89784930-89784949 MsG0480023783.01.T01:intron 30.0%
GTTTGGATTTCATACAATCA+TGG - Chr4:89784545-89784564 MsG0480023783.01.T01:intron 30.0%
TAGAAGTTTCTGCATAAACA+TGG + Chr4:89783726-89783745 None:intergenic 30.0%
TAGTTGACAGTATTCAAGAT+AGG - Chr4:89784807-89784826 MsG0480023783.01.T01:CDS 30.0%
TATCACATTGTATACTATGC+AGG - Chr4:89784876-89784895 MsG0480023783.01.T01:intron 30.0%
TCAAAGCCTAAAATTGTTAG+AGG - Chr4:89783075-89783094 MsG0480023783.01.T01:three_prime_UTR 30.0%
TCAGCGTAATTGGTATAATT+TGG + Chr4:89783814-89783833 None:intergenic 30.0%
TGTGGTTTATACCATATGTA+TGG - Chr4:89784460-89784479 MsG0480023783.01.T01:CDS 30.0%
TTGTATGAAATCCAAACAAG+AGG + Chr4:89784542-89784561 None:intergenic 30.0%
TTTCATACAATCATGGACAT+AGG - Chr4:89784552-89784571 MsG0480023783.01.T01:intron 30.0%
TTTGCTAAACAGAAGACAAT+GGG - Chr4:89786364-89786383 MsG0480023783.01.T01:intron 30.0%
TTTGTTAACAAAACAGTTGG+CGG - Chr4:89787058-89787077 MsG0480023783.01.T01:CDS 30.0%
! AATTAACAGAGCCTAAGTTT+TGG - Chr4:89785522-89785541 MsG0480023783.01.T01:intron 30.0%
! ATGTCGTTATCTATCGTTTT+TGG + Chr4:89785129-89785148 None:intergenic 30.0%
! ATTAACAGAGCCTAAGTTTT+GGG - Chr4:89785523-89785542 MsG0480023783.01.T01:intron 30.0%
! ATTCATTTTCTCCTCTTGTT+TGG - Chr4:89784528-89784547 MsG0480023783.01.T01:intron 30.0%
! CAAAGGTATAATATAATGGG+TGG + Chr4:89782918-89782937 None:intergenic 30.0%
! TACATGTTTTCTGTTGTCTT+TGG - Chr4:89785245-89785264 MsG0480023783.01.T01:intron 30.0%
! TGGTAAATCTGGAATGTAAT+CGG + Chr4:89783139-89783158 None:intergenic 30.0%
! TTTTGCTAAACAGAAGACAA+TGG - Chr4:89786363-89786382 MsG0480023783.01.T01:intron 30.0%
! TTTTTAACCTTTGATGTAGC+AGG - Chr4:89786336-89786355 MsG0480023783.01.T01:intron 30.0%
! TTTTTGAATATACGGAGAGA+AGG - Chr4:89785649-89785668 MsG0480023783.01.T01:CDS 30.0%
!! ACATTTTAAAGACCACATTG+AGG + Chr4:89785863-89785882 None:intergenic 30.0%
!! ATCTGTCGATTTGAAAAAGA+AGG + Chr4:89786483-89786502 None:intergenic 30.0%
!! TCTGTCGATTTGAAAAAGAA+GGG + Chr4:89786482-89786501 None:intergenic 30.0%
!! TGTCGTTATCTATCGTTTTT+GGG + Chr4:89785128-89785147 None:intergenic 30.0%
!!! AATTTGGTTTTTCACAGCAT+AGG + Chr4:89783798-89783817 None:intergenic 30.0%
!!! AGCATAGGTGTTGTTTTAAT+TGG + Chr4:89783783-89783802 None:intergenic 30.0%
!!! GGTGTTCCTTTTAATTTACT+AGG + Chr4:89785466-89785485 None:intergenic 30.0%
!!! TTTTTTTATTCTGTTTGCGC+CGG - Chr4:89785834-89785853 MsG0480023783.01.T01:intron 30.0%
AAAAGGAACCTATCGTCTAT+CGG - Chr4:89783972-89783991 MsG0480023783.01.T01:intron 35.0%
AAAGGTTCTGTTAAAGTTGC+TGG - Chr4:89784152-89784171 MsG0480023783.01.T01:intron 35.0%
AACGATAGATAACGACATTC+CGG - Chr4:89785131-89785150 MsG0480023783.01.T01:intron 35.0%
AATGATATACATAAGCGTGG+CGG - Chr4:89784740-89784759 MsG0480023783.01.T01:CDS 35.0%
ACCTTTCTATCAGAAAATCG+TGG + Chr4:89784138-89784157 None:intergenic 35.0%
ACGGTTTCTAATTTCCTATG+AGG + Chr4:89785079-89785098 None:intergenic 35.0%
AGGACACCAGACATATAAAT+TGG - Chr4:89784896-89784915 MsG0480023783.01.T01:intron 35.0%
AGTAGCAGTAGCTAACAAAA+CGG + Chr4:89783027-89783046 None:intergenic 35.0%
ATGGTTATTGTGATTGCTGA+AGG - Chr4:89785690-89785709 MsG0480023783.01.T01:CDS 35.0%
ATGTTCTGTTGTGATGTGAA+GGG - Chr4:89784663-89784682 MsG0480023783.01.T01:intron 35.0%
CGTAATGATATACATAAGCG+TGG - Chr4:89784737-89784756 MsG0480023783.01.T01:CDS 35.0%
CGTGAATGTATCACATTCAA+AGG + Chr4:89782935-89782954 None:intergenic 35.0%
CTAACAAAACGGAGATAGAA+AGG + Chr4:89783016-89783035 None:intergenic 35.0%
GAGAGAAGGCTAAAAGAAAA+TGG - Chr4:89785663-89785682 MsG0480023783.01.T01:CDS 35.0%
GATGAACTTAACACATTAGC+CGG + Chr4:89785977-89785996 None:intergenic 35.0%
GATTAGAAGAGGAGAATGAA+TGG + Chr4:89782896-89782915 None:intergenic 35.0%
GGAATGTAATCGGTTAAATG+AGG + Chr4:89783129-89783148 None:intergenic 35.0%
GGACACCAGACATATAAATT+GGG - Chr4:89784897-89784916 MsG0480023783.01.T01:intron 35.0%
GGGGAGGTAAAAATAATTAC+CGG + Chr4:89785153-89785172 None:intergenic 35.0%
GGTCGTATTTATAGTAAACG+TGG + Chr4:89782875-89782894 None:intergenic 35.0%
GGTCTTAGCAATCAAAAAAC+TGG + Chr4:89786960-89786979 None:intergenic 35.0%
GGTTAACGAACTCACATTAA+AGG + Chr4:89786652-89786671 None:intergenic 35.0%
GTTATTAGGGAGTTAGTATG+TGG - Chr4:89784442-89784461 MsG0480023783.01.T01:CDS 35.0%
GTTGACAGTATTCAAGATAG+GGG - Chr4:89784809-89784828 MsG0480023783.01.T01:CDS 35.0%
TAGGTTATTGACAAGTCCTT+CGG - Chr4:89785273-89785292 MsG0480023783.01.T01:intron 35.0%
TCAAACATGCAAACTAGCAT+AGG + Chr4:89786013-89786032 None:intergenic 35.0%
TCATAGGAAATTAGAAACCG+TGG - Chr4:89785078-89785097 MsG0480023783.01.T01:intron 35.0%
TCCATTTAGGCTATGATTAC+CGG - Chr4:89785955-89785974 MsG0480023783.01.T01:intron 35.0%
TCTGCTTCTGCAAAATACAT+AGG - Chr4:89786691-89786710 MsG0480023783.01.T01:intron 35.0%
TTAAATGAGGAACATCTTCG+AGG + Chr4:89783116-89783135 None:intergenic 35.0%
TTCCTTCTTCTTCTCTTCAA+CGG + Chr4:89786984-89787003 None:intergenic 35.0%
TTCTTCAAGATGTTGGACTA+TGG - Chr4:89785784-89785803 MsG0480023783.01.T01:intron 35.0%
TTGTTAACAAAACAGTTGGC+GGG - Chr4:89787059-89787078 MsG0480023783.01.T01:CDS 35.0%
! ACAGCTCTAATCATATAGGT+AGG + Chr4:89786506-89786525 None:intergenic 35.0%
! ACTTTATAAGTAGCTTGTGG+TGG - Chr4:89786161-89786180 MsG0480023783.01.T01:intron 35.0%
! AGGCGGTCTTTTTGAATATA+CGG - Chr4:89785641-89785660 MsG0480023783.01.T01:CDS 35.0%
! ATGGATATCCCATAAGTTGA+AGG - Chr4:89785803-89785822 MsG0480023783.01.T01:intron 35.0%
! GAAGCATTTCTATCTGAACA+TGG - Chr4:89786119-89786138 MsG0480023783.01.T01:intron 35.0%
! TAGACGATAGGTTCCTTTTA+TGG + Chr4:89783971-89783990 None:intergenic 35.0%
! TCCACGATTTTCTGATAGAA+AGG - Chr4:89784134-89784153 MsG0480023783.01.T01:intron 35.0%
! TCTGTTGTCTTTGGCTTAAT+AGG - Chr4:89785254-89785273 MsG0480023783.01.T01:intron 35.0%
! TGGAACAGCTCTAATCATAT+AGG + Chr4:89786510-89786529 None:intergenic 35.0%
!! AATAGGTGTTGTCAAGTTGA+TGG - Chr4:89785371-89785390 MsG0480023783.01.T01:intron 35.0%
!! AGAAGAAACAGGTTTTAACC+GGG + Chr4:89783208-89783227 None:intergenic 35.0%
!! ATAGGTGTTGTCAAGTTGAT+GGG - Chr4:89785372-89785391 MsG0480023783.01.T01:intron 35.0%
!! GAAAGTGTTGAAAACGGAAT+AGG - Chr4:89785354-89785373 MsG0480023783.01.T01:intron 35.0%
!! GAAGCTGAAAGTGTTGAAAA+CGG - Chr4:89785348-89785367 MsG0480023783.01.T01:intron 35.0%
!! GAGAAGAAACAGGTTTTAAC+CGG + Chr4:89783209-89783228 None:intergenic 35.0%
!! TATAATGGGTGGATTAGAAG+AGG + Chr4:89782907-89782926 None:intergenic 35.0%
!! TATGGCGTCAAGAAAGTATT+AGG - Chr4:89784478-89784497 MsG0480023783.01.T01:CDS 35.0%
!! TTGAGTTGGAATCCACAAAT+AGG + Chr4:89785180-89785199 None:intergenic 35.0%
AAAGACCACATTGAGGTAAC+CGG + Chr4:89785856-89785875 None:intergenic 40.0%
AAGGTCGAGGCTAAAATGAT+GGG + Chr4:89787114-89787133 None:intergenic 40.0%
AATTAGAAACCGTGGTCTCA+AGG - Chr4:89785086-89785105 MsG0480023783.01.T01:intron 40.0%
ACTGCTACTGAGTAGTGATA+TGG - Chr4:89783038-89783057 MsG0480023783.01.T01:three_prime_UTR 40.0%
AGATACGTCAGCTCAGTTAA+TGG + Chr4:89783695-89783714 None:intergenic 40.0%
AGCGTTACATTATGACTGCA+AGG - Chr4:89786808-89786827 MsG0480023783.01.T01:intron 40.0%
AGTGATAACCGATCGAATGT+GGG - Chr4:89786907-89786926 MsG0480023783.01.T01:intron 40.0%
ATCTTCGAGGATATAACCAG+CGG + Chr4:89783103-89783122 None:intergenic 40.0%
CAAGTTACCGTTACAACACA+AGG + Chr4:89787133-89787152 None:intergenic 40.0%
CAGCAATCACAATAACCATG+TGG + Chr4:89785689-89785708 None:intergenic 40.0%
CAGGAAACTTACCACTGTAT+CGG + Chr4:89785398-89785417 None:intergenic 40.0%
CAGGTTTGAACTGTTTGAGT+TGG + Chr4:89785194-89785213 None:intergenic 40.0%
CCAACAAAGATAGTCCAAGA+GGG - Chr4:89784237-89784256 MsG0480023783.01.T01:intron 40.0%
CTGCTACTGAGTAGTGATAT+GGG - Chr4:89783039-89783058 MsG0480023783.01.T01:three_prime_UTR 40.0%
CTTTCTTGACGCCATACATA+TGG + Chr4:89784474-89784493 None:intergenic 40.0%
GAATCCACAAATAGGAAGAG+GGG + Chr4:89785172-89785191 None:intergenic 40.0%
GACATCTTATGGATGTGGAA+AGG + Chr4:89787189-89787208 None:intergenic 40.0%
GAGTGATTCACGAAGGAAAA+AGG + Chr4:89782961-89782980 None:intergenic 40.0%
GATATGCACGAAATATTGCC+TGG + Chr4:89783477-89783496 None:intergenic 40.0%
GATGTTCTGTTGTGATGTGA+AGG - Chr4:89784662-89784681 MsG0480023783.01.T01:intron 40.0%
GATTAGTGAGTGATTCACGA+AGG + Chr4:89782968-89782987 None:intergenic 40.0%
GCTAAAAGAAAATGGCCACA+TGG - Chr4:89785671-89785690 MsG0480023783.01.T01:CDS 40.0%
GGAATCCACAAATAGGAAGA+GGG + Chr4:89785173-89785192 None:intergenic 40.0%
GTCGTAAAATAAGCACACGA+AGG + Chr4:89784330-89784349 None:intergenic 40.0%
TAAACCTCCACATGTCACAA+TGG + Chr4:89784404-89784423 None:intergenic 40.0%
TACAAGTCAACCATGCTAAC+TGG + Chr4:89785227-89785246 None:intergenic 40.0%
TACTTGACAACTGAATAGGC+AGG + Chr4:89783361-89783380 None:intergenic 40.0%
TAGCTAGGTAGAGAAGAAAC+AGG + Chr4:89783219-89783238 None:intergenic 40.0%
TAGTGATAACCGATCGAATG+TGG - Chr4:89786906-89786925 MsG0480023783.01.T01:intron 40.0%
TCAAGATAGGGGAATCAATC+AGG - Chr4:89784820-89784839 MsG0480023783.01.T01:CDS 40.0%
TCTGCATAAACATGGGATTG+TGG + Chr4:89783718-89783737 None:intergenic 40.0%
TGGAATCCACAAATAGGAAG+AGG + Chr4:89785174-89785193 None:intergenic 40.0%
TGGTCTCAACACCGTTATTA+GGG - Chr4:89784429-89784448 MsG0480023783.01.T01:CDS 40.0%
TTGCTACTCAACCCAAATCA+AGG + Chr4:89782845-89782864 None:intergenic 40.0%
TTTCCTACTACCAGTTAGCA+TGG - Chr4:89785214-89785233 MsG0480023783.01.T01:intron 40.0%
! GACAATGCAAGTTGAAACAG+CGG - Chr4:89784111-89784130 MsG0480023783.01.T01:intron 40.0%
! GGGCGCTTATAGAATTTTTG+AGG - Chr4:89784962-89784981 MsG0480023783.01.T01:intron 40.0%
! GTCCAAGAGGGATACATTTT+CGG - Chr4:89784249-89784268 MsG0480023783.01.T01:intron 40.0%
! TGTGGACTGTTGCTTAATTC+CGG - Chr4:89785595-89785614 MsG0480023783.01.T01:intron 40.0%
! TTGTGGTGGAAACATGATCA+CGG - Chr4:89786175-89786194 MsG0480023783.01.T01:intron 40.0%
!! TGATTTGGGTTGAGTAGCAA+TGG - Chr4:89782845-89782864 MsG0480023783.01.T01:three_prime_UTR 40.0%
AAAATTGTTAGAGGCTCCGC+TGG - Chr4:89783084-89783103 MsG0480023783.01.T01:three_prime_UTR 45.0%
ACATGCAAACTAGCATAGGC+AGG + Chr4:89786009-89786028 None:intergenic 45.0%
ACATGTGGAGGTTTATGTCC+TGG - Chr4:89784409-89784428 MsG0480023783.01.T01:CDS 45.0%
ACGAAATATTGCCTGGCAAG+AGG + Chr4:89783470-89783489 None:intergenic 45.0%
ATTGTGATTGCTGAAGGAGC+AGG - Chr4:89785696-89785715 MsG0480023783.01.T01:CDS 45.0%
CAACCATGCTAACTGGTAGT+AGG + Chr4:89785220-89785239 None:intergenic 45.0%
CAAGGTCGAGGCTAAAATGA+TGG + Chr4:89787115-89787134 None:intergenic 45.0%
CATGCAAACTAGCATAGGCA+GGG + Chr4:89786008-89786027 None:intergenic 45.0%
CCAACGTTCTTCGCTGATAA+AGG - Chr4:89783901-89783920 MsG0480023783.01.T01:intron 45.0%
CCCTCTTGGACTATCTTTGT+TGG + Chr4:89784240-89784259 None:intergenic 45.0%
CCTTTATCAGCGAAGAACGT+TGG + Chr4:89783904-89783923 None:intergenic 45.0%
CGAAATATTGCCTGGCAAGA+GGG + Chr4:89783469-89783488 None:intergenic 45.0%
CGATGACAGTGTTCCTCAAA+AGG - Chr4:89783496-89783515 MsG0480023783.01.T01:intron 45.0%
CTGGTCTCAACACCGTTATT+AGG - Chr4:89784428-89784447 MsG0480023783.01.T01:CDS 45.0%
CTTCTTCTTCTCTTCAACGG+CGG + Chr4:89786981-89787000 None:intergenic 45.0%
GAATTAGAACGACGACGTAC+TGG + Chr4:89783159-89783178 None:intergenic 45.0%
GATGTGAAGGGAGGATACAA+GGG - Chr4:89784675-89784694 MsG0480023783.01.T01:intron 45.0%
GCCAACAAAGATAGTCCAAG+AGG - Chr4:89784236-89784255 MsG0480023783.01.T01:intron 45.0%
GCCGGTAATCATAGCCTAAA+TGG + Chr4:89785959-89785978 None:intergenic 45.0%
GCTAACTGGTAGTAGGAAAC+AGG + Chr4:89785213-89785232 None:intergenic 45.0%
GTGGTGCAGAGAATCAATGA+AGG - Chr4:89786872-89786891 MsG0480023783.01.T01:intron 45.0%
TACGCTTCTTGCTCAAAGTG+CGG - Chr4:89786556-89786575 MsG0480023783.01.T01:intron 45.0%
TAGGCAGGATTGTCTTGCAA+TGG + Chr4:89783346-89783365 None:intergenic 45.0%
TGATGTGAAGGGAGGATACA+AGG - Chr4:89784674-89784693 MsG0480023783.01.T01:intron 45.0%
TTAATTTCCTCCCTCTTGCC+AGG - Chr4:89783456-89783475 MsG0480023783.01.T01:intron 45.0%
TTCTGTTGTGATGTGAAGGG+AGG - Chr4:89784666-89784685 MsG0480023783.01.T01:intron 45.0%
! CTAATAACGGTGTTGAGACC+AGG + Chr4:89784430-89784449 None:intergenic 45.0%
! CTATGCTTTTCTCTTACGCC+CGG - Chr4:89783187-89783206 MsG0480023783.01.T01:CDS 45.0%
! GCGGAGCCTCTAACAATTTT+AGG + Chr4:89783084-89783103 None:intergenic 45.0%
! TAGTCTTGCTCAACTCTCTC+GGG - Chr4:89786836-89786855 MsG0480023783.01.T01:intron 45.0%
! TGATCACGGTTGATGTTGAC+AGG - Chr4:89786189-89786208 MsG0480023783.01.T01:intron 45.0%
!! TGGAGGCATTACAAGCAATC+AGG + Chr4:89785417-89785436 None:intergenic 45.0%
!! TTCAAGGAAAAGGGTGTCTC+CGG + Chr4:89785617-89785636 None:intergenic 45.0%
!!! GCTACACTGGTTTTACGAGT+GGG - Chr4:89786597-89786616 MsG0480023783.01.T01:intron 45.0%
AAAAGACCGCCTGACCTTCA+AGG + Chr4:89785633-89785652 None:intergenic 50.0%
AACAGCTGTGTCAAAGCCGA+AGG + Chr4:89785292-89785311 None:intergenic 50.0%
AAGCCTAGCCCACATTCGAT+CGG + Chr4:89786918-89786937 None:intergenic 50.0%
AAGTGCGGTTCATGGAGCAA+TGG - Chr4:89786571-89786590 MsG0480023783.01.T01:intron 50.0%
AATATTGCCTGGCAAGAGGG+AGG + Chr4:89783466-89783485 None:intergenic 50.0%
ACCGTTACAACACAAGGTCG+AGG + Chr4:89787127-89787146 None:intergenic 50.0%
ACCTCCCCTCTTCCTATTTG+TGG - Chr4:89785165-89785184 MsG0480023783.01.T01:CDS 50.0%
ACTAGCATAGGCAGGGAAGT+AGG + Chr4:89786001-89786020 None:intergenic 50.0%
ACTATCCTTGGTTCATCGCG+AGG - Chr4:89784764-89784783 MsG0480023783.01.T01:CDS 50.0%
AGCTCTCCACGGACATCTTA+TGG + Chr4:89787200-89787219 None:intergenic 50.0%
AGGAGGAGATGGAACTCAGA+GGG - Chr4:89784941-89784960 MsG0480023783.01.T01:intron 50.0%
ATGTAGAGCTGAGCTCTCCA+CGG + Chr4:89787211-89787230 None:intergenic 50.0%
CAACTGCAACCTTGAGACCA+CGG + Chr4:89785098-89785117 None:intergenic 50.0%
CCACATCCATAAGATGTCCG+TGG - Chr4:89787191-89787210 MsG0480023783.01.T01:five_prime_UTR 50.0%
CCACGGACATCTTATGGATG+TGG + Chr4:89787194-89787213 None:intergenic 50.0%
CGCCGAAAATGTATCCCTCT+TGG + Chr4:89784254-89784273 None:intergenic 50.0%
CGCCGTTGAAGAGAAGAAGA+AGG - Chr4:89786979-89786998 MsG0480023783.01.T01:intron 50.0%
CGCCTGACCTTCAAGGAAAA+GGG + Chr4:89785626-89785645 None:intergenic 50.0%
CGTACAGTACACGTTGTCAG+AGG + Chr4:89786540-89786559 None:intergenic 50.0%
CTTGCTCAAAGTGCGGTTCA+TGG - Chr4:89786563-89786582 MsG0480023783.01.T01:intron 50.0%
CTTTGACACAGCTGTTGAGG+AGG - Chr4:89785296-89785315 MsG0480023783.01.T01:intron 50.0%
GCCTCGACCTTGTGTTGTAA+CGG - Chr4:89787123-89787142 MsG0480023783.01.T01:five_prime_UTR 50.0%
GGAACCTATCGTCTATCGGA+CGG - Chr4:89783976-89783995 MsG0480023783.01.T01:intron 50.0%
GGTCTCAAGGTTGCAGTTGT+AGG - Chr4:89785099-89785118 MsG0480023783.01.T01:intron 50.0%
GTTTCCGTCCGATAGACGAT+AGG + Chr4:89783983-89784002 None:intergenic 50.0%
TAACCGATCGAATGTGGGCT+AGG - Chr4:89786912-89786931 MsG0480023783.01.T01:intron 50.0%
TAGGAGGAGATGGAACTCAG+AGG - Chr4:89784940-89784959 MsG0480023783.01.T01:intron 50.0%
TCCACAAATAGGAAGAGGGG+AGG + Chr4:89785169-89785188 None:intergenic 50.0%
TGTATGCCACCCTTGCGAAT+CGG - Chr4:89785570-89785589 MsG0480023783.01.T01:intron 50.0%
TTGAAGCACGCGAAGCTGAT+AGG + Chr4:89785440-89785459 None:intergenic 50.0%
! ACCACACCTTTTGACGAGTC+CGG + Chr4:89784279-89784298 None:intergenic 50.0%
! CACCCTTTTCCTTGAAGGTC+AGG - Chr4:89785621-89785640 MsG0480023783.01.T01:intron 50.0%
! CCTTTTCCTTGAAGGTCAGG+CGG - Chr4:89785624-89785643 MsG0480023783.01.T01:intron 50.0%
! CGACGACGTACTGGTAAATC+TGG + Chr4:89783150-89783169 None:intergenic 50.0%
! GGAGACACCCTTTTCCTTGA+AGG - Chr4:89785616-89785635 MsG0480023783.01.T01:intron 50.0%
! TTTACGAGTGGGCTTGTGCA+TGG - Chr4:89786608-89786627 MsG0480023783.01.T01:CDS 50.0%
!! AAGTTGATGGGCCGATACAG+TGG - Chr4:89785384-89785403 MsG0480023783.01.T01:intron 50.0%
!! ACGTTGTCAGAGGCATTGCT+TGG + Chr4:89786530-89786549 None:intergenic 50.0%
!!! GGCTACACTGGTTTTACGAG+TGG - Chr4:89786596-89786615 MsG0480023783.01.T01:intron 50.0%
AAGCACGCGAAGCTGATAGG+TGG + Chr4:89785437-89785456 None:intergenic 55.0%
ATCCTTGGTTCATCGCGAGG+TGG - Chr4:89784767-89784786 MsG0480023783.01.T01:CDS 55.0%
CACAAGCAGCAGGATGCTTC+TGG - Chr4:89785753-89785772 MsG0480023783.01.T01:intron 55.0%
CAGGCTGCCATTGTGACATG+TGG - Chr4:89784394-89784413 MsG0480023783.01.T01:CDS 55.0%
CCAATCCATGCACAAGCAGC+AGG - Chr4:89785743-89785762 MsG0480023783.01.T01:intron 55.0%
CCGCCTGACCTTCAAGGAAA+AGG + Chr4:89785627-89785646 None:intergenic 55.0%
GATTGCTGAAGGAGCAGGAC+AGG - Chr4:89785701-89785720 MsG0480023783.01.T01:CDS 55.0%
GCACCATGCGCCCAAAACTT+AGG + Chr4:89785536-89785555 None:intergenic 55.0%
GCTGCCATTGTGACATGTGG+AGG - Chr4:89784397-89784416 MsG0480023783.01.T01:CDS 55.0%
GGAGGAGATGGAACTCAGAG+GGG - Chr4:89784942-89784961 MsG0480023783.01.T01:intron 55.0%
GTATGCCACCCTTGCGAATC+GGG - Chr4:89785571-89785590 MsG0480023783.01.T01:intron 55.0%
GTCAGCTCAGTTAATGGCCC+TGG + Chr4:89783689-89783708 None:intergenic 55.0%
TGCTCAACTCTCTCGGGTGT+TGG - Chr4:89786842-89786861 MsG0480023783.01.T01:intron 55.0%
! AAGCGTGGCGGAACTATCCT+TGG - Chr4:89784752-89784771 MsG0480023783.01.T01:CDS 55.0%
! AGCATCCTGCTGCTTGTGCA+TGG + Chr4:89785751-89785770 None:intergenic 55.0%
! AGTCCACATCCCGATTCGCA+AGG + Chr4:89785583-89785602 None:intergenic 55.0%
! CCTGCTGCTTGTGCATGGAT+TGG + Chr4:89785746-89785765 None:intergenic 55.0%
! CGGCTTTGACACAGCTGTTG+AGG - Chr4:89785293-89785312 MsG0480023783.01.T01:intron 55.0%
! GGGATACATTTTCGGCGTGC+CGG - Chr4:89784257-89784276 MsG0480023783.01.T01:intron 55.0%
! GTCCACATCCCGATTCGCAA+GGG + Chr4:89785582-89785601 None:intergenic 55.0%
!! CTCGGGTGTTGGTTGCTTTG+TGG - Chr4:89786853-89786872 MsG0480023783.01.T01:intron 55.0%
!! TTGCGCCGGTTACCTCAATG+TGG - Chr4:89785848-89785867 MsG0480023783.01.T01:intron 55.0%
!!! AAGTTTTGGGCGCATGGTGC+AGG - Chr4:89785536-89785555 MsG0480023783.01.T01:intron 55.0%
!!! GAGCCTAAGTTTTGGGCGCA+TGG - Chr4:89785530-89785549 MsG0480023783.01.T01:intron 55.0%
CACCCTTGCGAATCGGGATG+TGG - Chr4:89785577-89785596 MsG0480023783.01.T01:intron 60.0%
CACGCGAAGCTGATAGGTGG+AGG + Chr4:89785434-89785453 None:intergenic 60.0%
GCCGGACTCGTCAAAAGGTG+TGG - Chr4:89784275-89784294 MsG0480023783.01.T01:intron 60.0%
GCGGTTCATGGAGCAATGGC+AGG - Chr4:89786575-89786594 MsG0480023783.01.T01:intron 60.0%
GGAGCAATGGCAGGCTACAC+TGG - Chr4:89786584-89786603 MsG0480023783.01.T01:intron 60.0%
GTCCACCTCGCGATGAACCA+AGG + Chr4:89784772-89784791 None:intergenic 60.0%
! CACATCCCGATTCGCAAGGG+TGG + Chr4:89785579-89785598 None:intergenic 60.0%
GGCGTGCCGGACTCGTCAAA+AGG - Chr4:89784270-89784289 MsG0480023783.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89782837 89787304 89782837 ID=MsG0480023783.01;Name=MsG0480023783.01
Chr4 mRNA 89782837 89787304 89782837 ID=MsG0480023783.01.T01;Parent=MsG0480023783.01;Name=MsG0480023783.01.T01;_AED=0.49;_eAED=0.49;_QI=220|0.44|0.7|1|1|1|10|271|327
Chr4 exon 89782837 89783260 89782837 ID=MsG0480023783.01.T01:exon:12545;Parent=MsG0480023783.01.T01
Chr4 exon 89784317 89784498 89784317 ID=MsG0480023783.01.T01:exon:12544;Parent=MsG0480023783.01.T01
Chr4 exon 89784736 89784865 89784736 ID=MsG0480023783.01.T01:exon:12543;Parent=MsG0480023783.01.T01
Chr4 exon 89784989 89785057 89784989 ID=MsG0480023783.01.T01:exon:12542;Parent=MsG0480023783.01.T01
Chr4 exon 89785158 89785211 89785158 ID=MsG0480023783.01.T01:exon:12541;Parent=MsG0480023783.01.T01
Chr4 exon 89785634 89785755 89785634 ID=MsG0480023783.01.T01:exon:12540;Parent=MsG0480023783.01.T01
Chr4 exon 89785850 89785911 89785850 ID=MsG0480023783.01.T01:exon:12539;Parent=MsG0480023783.01.T01
Chr4 exon 89786601 89786663 89786601 ID=MsG0480023783.01.T01:exon:12538;Parent=MsG0480023783.01.T01
Chr4 exon 89786764 89786810 89786764 ID=MsG0480023783.01.T01:exon:12537;Parent=MsG0480023783.01.T01
Chr4 exon 89786983 89787304 89786983 ID=MsG0480023783.01.T01:exon:12536;Parent=MsG0480023783.01.T01
Chr4 five_prime_UTR 89787085 89787304 89787085 ID=MsG0480023783.01.T01:five_prime_utr;Parent=MsG0480023783.01.T01
Chr4 CDS 89786983 89787084 89786983 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89786764 89786810 89786764 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89786601 89786663 89786601 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89785850 89785911 89785850 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89785634 89785755 89785634 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89785158 89785211 89785158 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89784989 89785057 89784989 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89784736 89784865 89784736 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89784317 89784498 89784317 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 CDS 89783108 89783260 89783108 ID=MsG0480023783.01.T01:cds;Parent=MsG0480023783.01.T01
Chr4 three_prime_UTR 89782837 89783107 89782837 ID=MsG0480023783.01.T01:three_prime_utr;Parent=MsG0480023783.01.T01
Gene Sequence

>MsG0480023783.01.T01

ATGGGTTCTTCTCCAAATTCAAAGCCTAAAATTGTTAGAGGCTCCGCTGGTTATATCCTCGAAGATGTTCCTCATTTAACCGATTACATTCCAGATTTACCAACATATTCTAATCCATTGCAAGACAATCCTGCCTATTCAGTTGTCAAGCAATATTTCGTGCATATCGATGACAGTGTTCCTCAAAAGGTTATATTTTCTTTTATTTTGGGATTATTGCCAACAAAGATAGTCCAAGAGGGATACATTTTCGGCGTGCCGGACTCGTCAAAAGATGAAGTTCAGGCTGCCATTGTGACATGTGGAGGTTTATGTCCTGGTCTCAACACCGTTATTAGGGAGTTAGTATGTGGTTTATACCATATGTATGGCGTCAAGAAAGTATTAGGAATCAGTGTTTATATAATAGGAGGAGATGGAACTCAGAGGGGCGCTTATAGAATTTTTGAGGAAATTAGAAACCGTGGTCTCAAGGTTGCAGTTGTAGGAATCCCAAAAACGATAGATAACGACATTCCGGTTATTGACAAGTCCTTCGGCTTTGACACAGCTGTTGAGGAGGCTCAAAGAGCTATAAATGCAGCACATGTTGAAGCTGAAAGTGTTGAAAACGGAATAGGTGTTGTCAAGTTGATGGGCCGATACAGTGGCGGTCTTTTTGAATATACGGAGAGAAGGCTAAAAGAAAATGGCCACATGGTTATTGTGATTGCTGAAGGAGCAGGACAGGAACTTGTTACTGAGAGCATCCAATCCATGCACAAGCAGCAGGATGCTTCTGGAAACAAACTTCTTCAAGATGTTGGACTATGGATATCCCATAAGTTGAAGAGAATCAATGAAGGACAGAACACAGTAGTGATAACCGATCGAATGTGGGCTAGGCTTTTATCTTCAACAAATCAGCCCAGTTTTTTGATTGCTAAGACCGCCGTTGAAGAGAAGAAGAAGGAAGAAGAAGAAGAAGATTCATTTAATCTGTAG
Protein sequence

>MsG0480023783.01.T01

MGSSPNSKPKIVRGSAGYILEDVPHLTDYIPDLPTYSNPLQDNPAYSVVKQYFVHIDDSVPQKVIFSFILGLLPTKIVQEGYIFGVPDSSKDEVQAAIVTCGGLCPGLNTVIRELVCGLYHMYGVKKVLGISVYIIGGDGTQRGAYRIFEEIRNRGLKVAVVGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESVENGIGVVKLMGRYSGGLFEYTERRLKENGHMVIVIAEGAGQELVTESIQSMHKQQDASGNKLLQDVGLWISHKLKRINEGQNTVVITDRMWARLLSSTNQPSFLIAKTAVEEKKKEEEEEDSFNL*