AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004167.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004167.01.T01 MTR_1g076400 97.631 1013 24 0 1 1013 1 1013 0.0 2013
MsG0180004167.01.T01 MTR_7g117890 28.854 1012 668 19 18 1005 16 999 1.23e-112 372
MsG0180004167.01.T01 MTR_8g027140 28.306 1021 682 20 8 1005 11 1004 7.19e-109 362
MsG0180004167.01.T01 MTR_1g040955 65.455 165 55 2 598 762 12 174 1.10e-57 196
MsG0180004167.01.T01 MTR_1g040985 66.667 138 45 1 596 733 78 214 1.04e-50 179
MsG0180004167.01.T01 MTR_3g115670 26.667 795 512 33 258 999 26 802 2.25e-46 180
MsG0180004167.01.T01 MTR_3g019360 28.031 635 402 18 392 1005 225 825 3.24e-44 173
MsG0180004167.01.T01 MTR_1g040915 72.917 96 25 1 600 695 167 261 5.20e-35 135
MsG0180004167.01.T01 MTR_1g040915 71.014 69 20 0 96 164 1 69 3.06e-22 98.6
MsG0180004167.01.T01 MTR_1g094215 21.997 591 384 15 32 600 31 566 1.78e-13 75.1
MsG0180004167.01.T01 MTR_4g063800 23.629 529 347 17 91 600 84 574 2.24e-13 74.7
MsG0180004167.01.T01 MTR_7g116600 38.202 89 55 0 239 327 56 144 1.54e-12 71.6
MsG0180004167.01.T01 MTR_4g485520 25.360 347 219 10 265 600 109 426 8.93e-12 69.3
MsG0180004167.01.T01 MTR_4g485520 25.360 347 219 10 265 600 277 594 1.25e-11 69.3
MsG0180004167.01.T01 MTR_1g094215 26.359 368 224 11 249 600 47 383 1.97e-11 67.8
MsG0180004167.01.T01 MTR_5g034440 23.729 295 206 6 47 331 65 350 8.55e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004167.01.T01 AT1G76390 27.464 761 471 29 264 965 28 766 4.80e-38 154
MsG0180004167.01.T01 AT1G76390 27.464 761 471 29 264 965 28 766 4.80e-38 154
MsG0180004167.01.T01 AT1G20780 26.959 753 487 29 264 968 26 763 5.26e-37 150
MsG0180004167.01.T01 AT1G20780 26.959 753 487 29 264 968 26 763 5.26e-37 150
MsG0180004167.01.T01 AT1G20780 26.959 753 487 29 264 968 26 763 5.26e-37 150
MsG0180004167.01.T01 AT1G68940 23.258 1062 697 33 35 999 37 1077 1.60e-34 143
MsG0180004167.01.T01 AT1G68940 23.202 1043 685 32 35 982 37 1058 1.16e-33 140
MsG0180004167.01.T01 AT1G68940 25.131 764 508 26 261 973 246 996 3.77e-31 132
MsG0180004167.01.T01 AT3G46510 22.978 544 343 22 85 600 80 575 5.23e-12 70.5
MsG0180004167.01.T01 AT1G71020 24.932 369 227 12 265 614 99 436 6.82e-12 69.7
MsG0180004167.01.T01 AT1G71020 24.932 369 227 12 265 614 247 584 9.73e-12 69.7
MsG0180004167.01.T01 AT3G54790 24.643 280 179 10 70 347 67 316 1.00e-11 69.7
MsG0180004167.01.T01 AT3G54790 24.643 280 179 10 70 347 67 316 1.00e-11 69.7
MsG0180004167.01.T01 AT3G52450 30.496 141 81 2 265 388 11 151 1.74e-11 68.2
MsG0180004167.01.T01 AT3G54790 24.643 280 179 10 70 347 31 280 1.77e-11 68.9
MsG0180004167.01.T01 AT2G23140 29.213 178 110 3 154 331 142 303 3.22e-11 68.2
MsG0180004167.01.T01 AT2G23140 29.213 178 110 3 154 331 139 300 3.44e-11 68.2
MsG0180004167.01.T01 AT2G23140 29.213 178 110 3 154 331 139 300 3.44e-11 68.2

Find 210 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGAACCTCTTGTGTTTC+TGG 0.059826 1:-74331799 None:intergenic
GCAGCAGCTGATGTTCTTAT+TGG 0.181583 1:+74330968 MsG0180004167.01.T01:CDS
GGCAAAAGCCATAGTTAATT+TGG 0.187215 1:+74332882 MsG0180004167.01.T01:CDS
GGCAGAAGCTTTAGGACTTT+TGG 0.205522 1:+74334142 MsG0180004167.01.T01:CDS
CCTTAGCAGCTTTCCTTCTA+AGG 0.210627 1:-74334265 None:intergenic
AAATGCAATGAGACCTTTAT+TGG 0.217381 1:+74334088 MsG0180004167.01.T01:CDS
TTGACCGGCAGTAATATTTA+TGG 0.222346 1:+74334233 MsG0180004167.01.T01:CDS
CATCTTCACTTCTCTGTCAT+TGG 0.229854 1:-74332049 None:intergenic
CTGTTGCAAAACTAGCAATT+TGG 0.235539 1:-74333226 None:intergenic
GTTAGTTCTCGTTCGGATTT+TGG 0.239898 1:-74333567 None:intergenic
ATCAAAGCTTCTAGCCTTCT+AGG 0.241589 1:-74333477 None:intergenic
ACCTCTGCTGAATCGTTTCC+AGG 0.248782 1:-74332455 None:intergenic
ATCTGCAATCTCTGGAGTTT+TGG 0.262837 1:+74334325 MsG0180004167.01.T01:CDS
CTCTTGAAGCAGATGTTAAA+AGG 0.268785 1:+74331104 MsG0180004167.01.T01:CDS
CATTGCTTGAACGTTATTCT+AGG 0.272811 1:+74334294 MsG0180004167.01.T01:CDS
AACAAGGATTGGATCTCTAT+TGG 0.289337 1:+74331988 MsG0180004167.01.T01:CDS
TCACTTAAGGCAGAAGCTTT+AGG 0.292250 1:+74334134 MsG0180004167.01.T01:CDS
CCAACGCTACGTGCTCTTCT+TGG 0.306871 1:+74333279 MsG0180004167.01.T01:CDS
TCTTCGATCGATTGTCTTAG+TGG 0.313992 1:-74331847 None:intergenic
CCGCATAAACGGAGCTGTTA+TGG 0.327966 1:+74331693 MsG0180004167.01.T01:CDS
ACAAGGATTGGATCTCTATT+GGG 0.328260 1:+74331989 MsG0180004167.01.T01:CDS
AGAAAGTTTCTCGAGGATTT+CGG 0.337226 1:-74333133 None:intergenic
TATCGAGTCACAGCGCGATT+TGG 0.345338 1:+74333707 MsG0180004167.01.T01:CDS
AACTACAAAGTTGATTGAAA+TGG 0.346902 1:+74333587 MsG0180004167.01.T01:CDS
ACGCTCTCAGTGCACTCTTC+AGG 0.348203 1:+74333667 MsG0180004167.01.T01:CDS
TGTTAAAAGGGCGAATAATA+TGG 0.357230 1:+74331117 MsG0180004167.01.T01:CDS
AACACTTTCTACATTGGTAT+TGG 0.361873 1:+74334025 MsG0180004167.01.T01:CDS
CAGCTATTAGAGCCTGCATT+TGG 0.370250 1:-74331954 None:intergenic
TAACAAATCAATTGCTGCCT+TGG 0.372173 1:-74332330 None:intergenic
ACAGTTAATATTGTACCTAT+TGG 0.373426 1:-74330914 None:intergenic
GTTTCTGATCTCTTAGTCCT+TGG 0.375417 1:-74331372 None:intergenic
AAACCAGCAACCGCTTGGTT+TGG 0.375908 1:-74333853 None:intergenic
TCAATACTTTGAAAGGGTTC+AGG 0.379007 1:+74331612 MsG0180004167.01.T01:CDS
AGGTATTCAACTACTCCTTC+TGG 0.379870 1:-74333447 None:intergenic
GCCATTGATATTCTTGAATC+CGG 0.380624 1:-74332862 None:intergenic
GGAATTGATTTCTTTGTTGA+TGG 0.386950 1:+74333168 MsG0180004167.01.T01:CDS
ATCCAACACCAAATTAACTA+TGG 0.387861 1:-74332890 None:intergenic
GGATCATATTATTTCGTGCT+TGG 0.390606 1:+74332289 MsG0180004167.01.T01:CDS
AACTAGCAATTTGGTGATGA+TGG 0.392035 1:-74333217 None:intergenic
GAACTGGCTCAATATCAAAT+AGG 0.394193 1:-74331021 None:intergenic
GTTCCTGTGGAAAGGCTAAC+AGG 0.396841 1:-74331721 None:intergenic
TTAGAGCCTGCATTTGGCTC+AGG 0.401778 1:-74331948 None:intergenic
CTTTGTAGTTAGTTCTCGTT+CGG 0.401965 1:-74333574 None:intergenic
AACATCAAATCTAGAATAAG+AGG 0.405447 1:-74333072 None:intergenic
GAAAAGAGTTGGCCAGCATT+AGG 0.407138 1:+74331473 MsG0180004167.01.T01:CDS
AGAAGGCTAGAAGCTTTGAT+TGG 0.408094 1:+74333480 MsG0180004167.01.T01:CDS
CGCTGTGACTCGATATTTGT+AGG 0.409793 1:-74333699 None:intergenic
TTTCCAAACCAAGCGGTTGC+TGG 0.410881 1:+74333850 MsG0180004167.01.T01:CDS
AAAATTCTATTAACAAGGAT+TGG 0.412160 1:+74331977 MsG0180004167.01.T01:CDS
TCTTTCCTTTGCCGCATAAA+CGG 0.416779 1:+74331682 MsG0180004167.01.T01:CDS
CTGCTCCAAGAAAACAAATT+CGG 0.420958 1:-74331533 None:intergenic
GACTCTAGAGCAACTCTAGC+AGG 0.426038 1:-74331082 None:intergenic
AGCTGTAATTCCTTTAGAAC+TGG 0.426952 1:-74331037 None:intergenic
CGACAATGATAATGTACAAA+TGG 0.431176 1:+74333518 MsG0180004167.01.T01:CDS
GATACCGTTATCTCGATCCT+TGG 0.434218 1:+74332021 MsG0180004167.01.T01:CDS
TTAAGAATCAATACTTTGAA+AGG 0.434740 1:+74331605 MsG0180004167.01.T01:CDS
ACTACAAAGTTGATTGAAAT+GGG 0.437763 1:+74333588 MsG0180004167.01.T01:CDS
AAGGAAATGGTGGAATACTA+TGG 0.438629 1:+74334182 MsG0180004167.01.T01:CDS
TGATATTGAGCCAGTTCTAA+AGG 0.439774 1:+74331027 MsG0180004167.01.T01:CDS
GGCATTTGCAAGTTCGAGAC+TGG 0.440948 1:+74333300 MsG0180004167.01.T01:CDS
CATGAGCAGTTCTCAAGACT+TGG 0.442224 1:-74330946 None:intergenic
ATGGAGACGGACACCTTAGA+AGG 0.442619 1:+74334252 MsG0180004167.01.T01:CDS
AGACCTTTCTTTATCAGCCC+TGG 0.443666 1:+74332993 MsG0180004167.01.T01:CDS
GATTTAAACTTGATACAACT+TGG 0.449112 1:+74332913 MsG0180004167.01.T01:CDS
TTGCAAGTTCGAGACTGGTT+TGG 0.450043 1:+74333305 MsG0180004167.01.T01:CDS
CTATCATGAGCTGCACATAA+AGG 0.455630 1:-74333894 None:intergenic
TCTTCATCATCTGCAATCTC+TGG 0.456840 1:+74334317 MsG0180004167.01.T01:CDS
AAGGGATATCGGAAGGTCTC+TGG 0.458262 1:+74331219 MsG0180004167.01.T01:CDS
GAGCAAGTTACAAGGGATAT+CGG 0.462903 1:+74331208 MsG0180004167.01.T01:CDS
CAAGTCAAAATCTCCAATAA+AGG 0.465556 1:-74334101 None:intergenic
GACCTTTCTTTATCAGCCCT+GGG 0.470312 1:+74332994 MsG0180004167.01.T01:CDS
CTAGCCTTCTAGGCTTGAAA+AGG 0.472124 1:-74333467 None:intergenic
ATTTCTTTGTTGATGGAGAA+GGG 0.472359 1:+74333175 MsG0180004167.01.T01:CDS
TTGGGGTAGTGAGTCACTTA+AGG 0.479262 1:+74334121 MsG0180004167.01.T01:CDS
GGTCCTTCACAAGGGTTACA+AGG 0.481227 1:-74332433 None:intergenic
CTCTAGAGCTGATGCAGCAA+GGG 0.481825 1:+74331570 MsG0180004167.01.T01:CDS
TAGATTTGATGTTCTCTCCT+CGG 0.486570 1:+74333082 MsG0180004167.01.T01:CDS
TAAGAATCAATACTTTGAAA+GGG 0.486686 1:+74331606 MsG0180004167.01.T01:CDS
TGCAAGGGCAGTTGGCGTGC+CGG 0.487076 1:+74331432 MsG0180004167.01.T01:CDS
GGATTGGAACTCATACCAAT+AGG 0.487791 1:+74330899 MsG0180004167.01.T01:CDS
CGTTTCCAGGGTCCTTCACA+AGG 0.487815 1:-74332442 None:intergenic
TATTGGAAAAGAGAGTTTCA+AGG 0.490061 1:+74330985 MsG0180004167.01.T01:CDS
CCTATCTCGGATGGTTCCAC+CGG 0.490488 1:-74331451 None:intergenic
ACGAAGGTTGTGACCTGAGT+TGG 0.490630 1:-74333253 None:intergenic
GCTATCGAGAATTTCTGATC+AGG 0.493655 1:+74331270 MsG0180004167.01.T01:CDS
TTGAGAAAATCAACAAGTAA+AGG 0.494414 1:-74333747 None:intergenic
GATGCAAAGGGTTGAGTTCG+AGG 0.494531 1:+74331312 MsG0180004167.01.T01:CDS
AGCCATAGTTAATTTGGTGT+TGG 0.494995 1:+74332888 MsG0180004167.01.T01:CDS
GTATGTCATTCGCGAAAGCC+TGG 0.495334 1:-74331399 None:intergenic
AAGGGAATTATTGCTTCCTC+CGG 0.497226 1:+74333042 MsG0180004167.01.T01:CDS
CTAGCTGATCGCATGATTCG+AGG 0.500921 1:+74332560 MsG0180004167.01.T01:CDS
CCTTAGAAGGAAAGCTGCTA+AGG 0.501027 1:+74334265 MsG0180004167.01.T01:CDS
CTCTGTCATTGGACTTCCCA+AGG 0.507482 1:-74332038 None:intergenic
TCAGCCCTGGGTAAACTAGC+TGG 0.507504 1:+74333006 MsG0180004167.01.T01:CDS
TTGGAAATAACTGTGAGCTT+TGG 0.507616 1:-74333834 None:intergenic
GACTACAAGGTGAGATGCAA+AGG 0.508604 1:+74331299 MsG0180004167.01.T01:CDS
GAGGAGATTGCAAGGGCAGT+TGG 0.509609 1:+74331424 MsG0180004167.01.T01:CDS
GATTTCTTTGTTGATGGAGA+AGG 0.512649 1:+74333174 MsG0180004167.01.T01:CDS
ATACCGTTATCTCGATCCTT+GGG 0.513686 1:+74332022 MsG0180004167.01.T01:CDS
AGCTGGATCTCATGCTAACA+AGG 0.519513 1:+74333023 MsG0180004167.01.T01:CDS
TCTACTTGCTAGTTAAATGC+CGG 0.520480 1:+74331167 MsG0180004167.01.T01:CDS
CTTCCCAAGGATCGAGATAA+CGG 0.521135 1:-74332025 None:intergenic
CCTTTGATAGAAATGATGTC+TGG 0.521661 1:+74332955 MsG0180004167.01.T01:CDS
TAGAGCCTGCATTTGGCTCA+GGG 0.522213 1:-74331947 None:intergenic
AATGTACAAATGGCTGCAGC+TGG 0.523529 1:+74333528 MsG0180004167.01.T01:CDS
AGGACTAAGAGATCAGAAAC+AGG 0.524044 1:+74331375 MsG0180004167.01.T01:CDS
CCGGTGGAACCATCCGAGAT+AGG 0.527413 1:+74331451 MsG0180004167.01.T01:CDS
TATCATTGTCGTCGTTCTCG+AGG 0.528609 1:-74333506 None:intergenic
AAACTTTCTGCTTCTGACGA+TGG 0.528761 1:+74333147 MsG0180004167.01.T01:CDS
CGGCAAAGGAAAGAATTAAG+AGG 0.530404 1:-74331673 None:intergenic
AGAGATCAGCTATTGAAGGT+TGG 0.530598 1:+74331752 MsG0180004167.01.T01:CDS
TTGGAAGCAAATGCTTTACC+TGG 0.532479 1:+74333948 MsG0180004167.01.T01:CDS
ACCGGATTCAAGAATATCAA+TGG 0.533121 1:+74332861 MsG0180004167.01.T01:CDS
AAACTTGATACAACTTGGAA+AGG 0.535362 1:+74332918 MsG0180004167.01.T01:CDS
AATACAAACACTTTCTACAT+TGG 0.535747 1:+74334019 MsG0180004167.01.T01:CDS
GCAATTGCAGCAGCTTTCAT+CGG 0.538108 1:+74333792 MsG0180004167.01.T01:CDS
TCACTGCTGCTAATTGTGGC+TGG 0.538398 1:+74332528 MsG0180004167.01.T01:CDS
TGTGAGAGATCAGCTATTGA+AGG 0.539191 1:+74331748 MsG0180004167.01.T01:CDS
GGAATTATTGCTTCCTCCGG+AGG 0.539312 1:+74333045 MsG0180004167.01.T01:CDS
TGATGTTCTCTCCTCGGACA+AGG 0.543610 1:+74333088 MsG0180004167.01.T01:CDS
CCAGACATCATTTCTATCAA+AGG 0.545276 1:-74332955 None:intergenic
TTGATACAACTTGGAAAGGA+AGG 0.545563 1:+74332922 MsG0180004167.01.T01:CDS
AGGAAGTTGAGCAAGTTACA+AGG 0.548285 1:+74331200 MsG0180004167.01.T01:CDS
TCTTGAAGCAGATGTTAAAA+GGG 0.550180 1:+74331105 MsG0180004167.01.T01:CDS
AGAATCCCTGAGCCAAATGC+AGG 0.550783 1:+74331942 MsG0180004167.01.T01:CDS
GATAGAGAGATACGATTCAA+AGG 0.551367 1:+74331636 MsG0180004167.01.T01:CDS
GAGTTGCTTCAAGAAAGATC+TGG 0.552357 1:+74332356 MsG0180004167.01.T01:CDS
AATTGGCTGAATCACAAGGA+TGG 0.555747 1:+74332267 MsG0180004167.01.T01:CDS
GATCCTGTTAGCCTTTCCAC+AGG 0.555922 1:+74331718 MsG0180004167.01.T01:CDS
CAGCTCCGTTTATGCGGCAA+AGG 0.557270 1:-74331687 None:intergenic
GATAAAGCTGTTACATGGTG+AGG 0.558362 1:+74333974 MsG0180004167.01.T01:CDS
TACCCAGGGCTGATAAAGAA+AGG 0.560311 1:-74332996 None:intergenic
GTCTCCATAAATATTACTGC+CGG 0.561473 1:-74334237 None:intergenic
CACATGTAGTTCCTGTGGAA+AGG 0.563701 1:-74331729 None:intergenic
TTCTCTCAGCATGAACCAGA+AGG 0.565766 1:+74333432 MsG0180004167.01.T01:CDS
GTAACCCTTGTGAAGGACCC+TGG 0.565954 1:+74332437 MsG0180004167.01.T01:CDS
AGCTGAAAATTCTATTAACA+AGG 0.570382 1:+74331972 MsG0180004167.01.T01:CDS
ATTGGCTGAATCACAAGGAT+GGG 0.570651 1:+74332268 MsG0180004167.01.T01:CDS
ATTGGAAGAGCATCCGCAGA+GGG 0.571893 1:+74334043 MsG0180004167.01.T01:CDS
AAAGGAAAGAATTAAGAGGT+TGG 0.572084 1:-74331669 None:intergenic
ACTTTGAAAGATGTTGTAGA+GGG 0.572945 1:+74332084 MsG0180004167.01.T01:CDS
CCAAGAAGAGCACGTAGCGT+TGG 0.573594 1:-74333279 None:intergenic
AAAGCAATTCTTGCAGCCAA+TGG 0.574145 1:+74333333 MsG0180004167.01.T01:CDS
GAGTCAGAATCATCAAGAAG+TGG 0.574190 1:-74333372 None:intergenic
CAAGGATTGGATCTCTATTG+GGG 0.575873 1:+74331990 MsG0180004167.01.T01:CDS
TTGCTCAACTTCCTCGACAA+TGG 0.577351 1:-74331191 None:intergenic
CCTCTGCTGAATCGTTTCCA+GGG 0.579125 1:-74332454 None:intergenic
GCTGAGAGAAAAGAAAGAGC+AGG 0.581887 1:-74333419 None:intergenic
TGCTTCAAGAAAGATCTGGT+TGG 0.583477 1:+74332360 MsG0180004167.01.T01:CDS
ATTTAACTAGCAAGTAGAAA+CGG 0.583722 1:-74331162 None:intergenic
GGCAGTAATATTTATGGAGA+CGG 0.583777 1:+74334239 MsG0180004167.01.T01:CDS
TAGAATAAGAGGAACACCTC+CGG 0.584174 1:-74333061 None:intergenic
CACTTTGAAAGATGTTGTAG+AGG 0.586417 1:+74332083 MsG0180004167.01.T01:CDS
CCATAACAGCTCCGTTTATG+CGG 0.587162 1:-74331693 None:intergenic
AAGGGCAGTTGGCGTGCCGG+TGG 0.588235 1:+74331435 MsG0180004167.01.T01:CDS
ATTGTCACTGCTGCTAATTG+TGG 0.588383 1:+74332524 MsG0180004167.01.T01:CDS
TTGCAACAGAATTCCAACTC+AGG 0.589919 1:+74333240 MsG0180004167.01.T01:CDS
TCGCGTTTGATTTGTTTGAC+CGG 0.589935 1:+74334218 MsG0180004167.01.T01:CDS
TAACCTTGTAACCCTTGTGA+AGG 0.590842 1:+74332430 MsG0180004167.01.T01:CDS
ATCCGAGATAGGAAAAGAGT+TGG 0.592571 1:+74331462 MsG0180004167.01.T01:CDS
CGAATCATGCGATCAGCTAG+TGG 0.593637 1:-74332557 None:intergenic
AGAGTTGGCCAGCATTAGGA+AGG 0.594767 1:+74331477 MsG0180004167.01.T01:CDS
GAGAAATTGGCTGAATCACA+AGG 0.594803 1:+74332263 MsG0180004167.01.T01:CDS
GCAGGTTTATAGCAGTCTCT+CGG 0.596490 1:-74333401 None:intergenic
ACTACAAGGTGAGATGCAAA+GGG 0.597147 1:+74331300 MsG0180004167.01.T01:CDS
GATCAGGTTGATAGACTACA+AGG 0.597370 1:+74331286 MsG0180004167.01.T01:CDS
ACATACTTGAGGAGATTGCA+AGG 0.599820 1:+74331416 MsG0180004167.01.T01:CDS
CACGTAGCGTTGGCTTACGA+AGG 0.602202 1:-74333269 None:intergenic
TCTCTAGAGCTGATGCAGCA+AGG 0.604293 1:+74331569 MsG0180004167.01.T01:CDS
TACAGGTTCAATCACTGCAA+AGG 0.608049 1:+74333770 MsG0180004167.01.T01:CDS
TTCCAATAGACAAAATGTTG+TGG 0.608354 1:-74333931 None:intergenic
GAGATCCAGCTAGTTTACCC+AGG 0.610834 1:-74333011 None:intergenic
TCTCTCACATGTAGTTCCTG+TGG 0.611431 1:-74331734 None:intergenic
TGGAAACGATTCAGCAGAGG+TGG 0.613714 1:+74332457 MsG0180004167.01.T01:CDS
CAACTTCCTCGACAATGGAC+CGG 0.616683 1:-74331186 None:intergenic
GGTTTGATAAAGCTGTTACA+TGG 0.619938 1:+74333969 MsG0180004167.01.T01:CDS
AAGCAACTCTAACATTTCCA+AGG 0.624995 1:+74332313 MsG0180004167.01.T01:CDS
AAGAATTAGAGATACGCCAT+TGG 0.628175 1:-74333349 None:intergenic
TAAGACAATCGATCGAAGAG+TGG 0.630519 1:+74331851 MsG0180004167.01.T01:CDS
AAGAGATCAGAAACAGGACC+AGG 0.632504 1:+74331381 MsG0180004167.01.T01:CDS
AAGTTACAAGGGATATCGGA+AGG 0.635464 1:+74331212 MsG0180004167.01.T01:CDS
TTCTTGAAGATACTAGCTTG+AGG 0.637093 1:+74331815 MsG0180004167.01.T01:CDS
AGATCCAGCTAGTTTACCCA+GGG 0.639000 1:-74333010 None:intergenic
GGATTGGATCTCTATTGGGG+AGG 0.641735 1:+74331993 MsG0180004167.01.T01:CDS
TGTAACAGCTTTATCAAACC+AGG 0.642306 1:-74333966 None:intergenic
ATTGTTGACAAGTTGAACCA+AGG 0.644614 1:+74331355 MsG0180004167.01.T01:CDS
GGAAGTTGAGCAAGTTACAA+GGG 0.644907 1:+74331201 MsG0180004167.01.T01:CDS
AACTGATCCAGAAACACAAG+AGG 0.645279 1:+74331792 MsG0180004167.01.T01:CDS
AGAGGGGCATGCAAGAAACA+AGG 0.645650 1:+74332101 MsG0180004167.01.T01:CDS
CCCTGGAAACGATTCAGCAG+AGG 0.647958 1:+74332454 MsG0180004167.01.T01:CDS
TTTCGCGAATGACATACTTG+AGG 0.650871 1:+74331405 MsG0180004167.01.T01:CDS
GTTTCCAGGGTCCTTCACAA+GGG 0.658541 1:-74332441 None:intergenic
TAAATGCCGGTCCATTGTCG+AGG 0.660709 1:+74331180 MsG0180004167.01.T01:CDS
CAGAAGCAGAAAGTTTCTCG+AGG 0.661727 1:-74333140 None:intergenic
ACAGTTATTTCCAAACCAAG+CGG 0.662952 1:+74333843 MsG0180004167.01.T01:CDS
CTTTGAAAGATGTTGTAGAG+GGG 0.675379 1:+74332085 MsG0180004167.01.T01:CDS
AATAAGAGGAACACCTCCGG+AGG 0.680566 1:-74333058 None:intergenic
GTAATGAATGACCTTGTCCG+AGG 0.681100 1:-74333099 None:intergenic
TATGAGTTCCAATCCTACCA+TGG 0.683552 1:-74330891 None:intergenic
GCTGGATCTCATGCTAACAA+GGG 0.684666 1:+74333024 MsG0180004167.01.T01:CDS
AATAGGTACAATATTAACTG+TGG 0.686641 1:+74330916 MsG0180004167.01.T01:CDS
ACAAAGTTGATTGAAATGGG+AGG 0.690277 1:+74333591 MsG0180004167.01.T01:CDS
CAGCGCGATTTGGTTAAACG+CGG 0.693546 1:+74333717 MsG0180004167.01.T01:CDS
AACAAACGAGCACCCCTCTG+CGG 0.694775 1:-74334056 None:intergenic
CATACTTGAGGAGATTGCAA+GGG 0.701171 1:+74331417 MsG0180004167.01.T01:CDS
CTAGCAAGTAGAAACGGCCA+CGG 0.705648 1:-74331156 None:intergenic
GGTGGAATACTATGGAACGA+CGG 0.715990 1:+74334190 MsG0180004167.01.T01:CDS
GTTGAGAAGTACAAGAACCG+TGG 0.724475 1:+74331139 MsG0180004167.01.T01:CDS
TATTGGAAGAGCATCCGCAG+AGG 0.727150 1:+74334042 MsG0180004167.01.T01:CDS
TTGGAAGAGCATCCGCAGAG+GGG 0.744656 1:+74334044 MsG0180004167.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGTAATAGGAGAAAT+TGG + Chr1:74332250-74332269 MsG0180004167.01.T01:intron 20.0%
!! AAAATTCTATTAACAAGGAT+TGG + Chr1:74331977-74331996 MsG0180004167.01.T01:CDS 20.0%
!! CATTTGCATAAAAATGTAAT+AGG + Chr1:74332241-74332260 MsG0180004167.01.T01:intron 20.0%
!! TTAAGAATCAATACTTTGAA+AGG + Chr1:74331605-74331624 MsG0180004167.01.T01:CDS 20.0%
!!! ATCATAAGCATTTTAAAAAC+AGG + Chr1:74333624-74333643 MsG0180004167.01.T01:CDS 20.0%
!!! TAAGAATCAATACTTTGAAA+GGG + Chr1:74331606-74331625 MsG0180004167.01.T01:CDS 20.0%
!!! TCAATTATTGTCTTTTGATA+AGG + Chr1:74331881-74331900 MsG0180004167.01.T01:CDS 20.0%
! AATACAAACACTTTCTACAT+TGG + Chr1:74334019-74334038 MsG0180004167.01.T01:CDS 25.0%
! AATAGGTACAATATTAACTG+TGG + Chr1:74330916-74330935 MsG0180004167.01.T01:CDS 25.0%
! ACAGTTAATATTGTACCTAT+TGG - Chr1:74330917-74330936 None:intergenic 25.0%
! AGCTGAAAATTCTATTAACA+AGG + Chr1:74331972-74331991 MsG0180004167.01.T01:CDS 25.0%
! ATTTAACTAGCAAGTAGAAA+CGG - Chr1:74331165-74331184 None:intergenic 25.0%
! GATTTAAACTTGATACAACT+TGG + Chr1:74332913-74332932 MsG0180004167.01.T01:CDS 25.0%
! TTGAGAAAATCAACAAGTAA+AGG - Chr1:74333750-74333769 None:intergenic 25.0%
!! AACATCAAATCTAGAATAAG+AGG - Chr1:74333075-74333094 None:intergenic 25.0%
!! AACTACAAAGTTGATTGAAA+TGG + Chr1:74333587-74333606 MsG0180004167.01.T01:CDS 25.0%
!! AATTTAACGACAAATTTTCC+CGG - Chr1:74331912-74331931 None:intergenic 25.0%
!! ACTACAAAGTTGATTGAAAT+GGG + Chr1:74333588-74333607 MsG0180004167.01.T01:CDS 25.0%
!!! CATTTTAAAAACAGGCAAAA+TGG + Chr1:74333632-74333651 MsG0180004167.01.T01:CDS 25.0%
!!! TTTATTGGAGATTTTGACTT+GGG + Chr1:74334103-74334122 MsG0180004167.01.T01:CDS 25.0%
AAACTTGATACAACTTGGAA+AGG + Chr1:74332918-74332937 MsG0180004167.01.T01:CDS 30.0%
AAAGGAAAGAATTAAGAGGT+TGG - Chr1:74331672-74331691 None:intergenic 30.0%
AAATGCAATGAGACCTTTAT+TGG + Chr1:74334088-74334107 MsG0180004167.01.T01:CDS 30.0%
AACACTTTCTACATTGGTAT+TGG + Chr1:74334025-74334044 MsG0180004167.01.T01:CDS 30.0%
ATATAATCTACTATGACCCT+AGG - Chr1:74332810-74332829 None:intergenic 30.0%
ATCCAACACCAAATTAACTA+TGG - Chr1:74332893-74332912 None:intergenic 30.0%
CAAGTCAAAATCTCCAATAA+AGG - Chr1:74334104-74334123 None:intergenic 30.0%
TATTGGAAAAGAGAGTTTCA+AGG + Chr1:74330985-74331004 MsG0180004167.01.T01:CDS 30.0%
TCATGAATACTAAATCTCAG+TGG - Chr1:74332155-74332174 None:intergenic 30.0%
TCTTGAAGCAGATGTTAAAA+GGG + Chr1:74331105-74331124 MsG0180004167.01.T01:CDS 30.0%
TGTTAAAAGGGCGAATAATA+TGG + Chr1:74331117-74331136 MsG0180004167.01.T01:CDS 30.0%
TTCCAATAGACAAAATGTTG+TGG - Chr1:74333934-74333953 None:intergenic 30.0%
! ACTTTGAAAGATGTTGTAGA+GGG + Chr1:74332084-74332103 MsG0180004167.01.T01:CDS 30.0%
! ATTTCTTTGTTGATGGAGAA+GGG + Chr1:74333175-74333194 MsG0180004167.01.T01:CDS 30.0%
! CGACAATGATAATGTACAAA+TGG + Chr1:74333518-74333537 MsG0180004167.01.T01:CDS 30.0%
! GGAATTGATTTCTTTGTTGA+TGG + Chr1:74333168-74333187 MsG0180004167.01.T01:CDS 30.0%
!! AAAAGCCGAATTTGTTTTCT+TGG + Chr1:74331528-74331547 MsG0180004167.01.T01:CDS 30.0%
!! AGTTGTTTTCATAAGCTATC+CGG - Chr1:74332708-74332727 None:intergenic 30.0%
!! CTTATTTCTATAAGCTCATC+CGG + Chr1:74332686-74332705 MsG0180004167.01.T01:intron 30.0%
!!! ATTGAAGGTTGGTTTTATGA+TGG + Chr1:74331763-74331782 MsG0180004167.01.T01:CDS 30.0%
!!! CTTGTTGATTTTCTCAATAC+AGG + Chr1:74333753-74333772 MsG0180004167.01.T01:CDS 30.0%
!!! CTTTATTGGAGATTTTGACT+TGG + Chr1:74334102-74334121 MsG0180004167.01.T01:CDS 30.0%
!!! TTATTGGAGATTTTGACTTG+GGG + Chr1:74334104-74334123 MsG0180004167.01.T01:CDS 30.0%
AAAAAGAAGAAGCTGCGAAT+AGG + Chr1:74331500-74331519 MsG0180004167.01.T01:CDS 35.0%
AACAAGGATTGGATCTCTAT+TGG + Chr1:74331988-74332007 MsG0180004167.01.T01:CDS 35.0%
AAGAATTAGAGATACGCCAT+TGG - Chr1:74333352-74333371 None:intergenic 35.0%
AAGCAACTCTAACATTTCCA+AGG + Chr1:74332313-74332332 MsG0180004167.01.T01:CDS 35.0%
ACAAGGATTGGATCTCTATT+GGG + Chr1:74331989-74332008 MsG0180004167.01.T01:CDS 35.0%
ACCGGATTCAAGAATATCAA+TGG + Chr1:74332861-74332880 MsG0180004167.01.T01:CDS 35.0%
AGAAAGTTTCTCGAGGATTT+CGG - Chr1:74333136-74333155 None:intergenic 35.0%
CACTTATATGTCAAGTCCTA+GGG + Chr1:74332791-74332810 MsG0180004167.01.T01:intron 35.0%
CATTGCTTGAACGTTATTCT+AGG + Chr1:74334294-74334313 MsG0180004167.01.T01:CDS 35.0%
CCAGACATCATTTCTATCAA+AGG - Chr1:74332958-74332977 None:intergenic 35.0%
CCTTTGATAGAAATGATGTC+TGG + Chr1:74332955-74332974 MsG0180004167.01.T01:CDS 35.0%
CTCTTGAAGCAGATGTTAAA+AGG + Chr1:74331104-74331123 MsG0180004167.01.T01:CDS 35.0%
CTGCTCCAAGAAAACAAATT+CGG - Chr1:74331536-74331555 None:intergenic 35.0%
CTGTTGCAAAACTAGCAATT+TGG - Chr1:74333229-74333248 None:intergenic 35.0%
GATAGAGAGATACGATTCAA+AGG + Chr1:74331636-74331655 MsG0180004167.01.T01:CDS 35.0%
GCCATTGATATTCTTGAATC+CGG - Chr1:74332865-74332884 None:intergenic 35.0%
GGATCATATTATTTCGTGCT+TGG + Chr1:74332289-74332308 MsG0180004167.01.T01:CDS 35.0%
GGCAAAAGCCATAGTTAATT+TGG + Chr1:74332882-74332901 MsG0180004167.01.T01:CDS 35.0%
GGCAGTAATATTTATGGAGA+CGG + Chr1:74334239-74334258 MsG0180004167.01.T01:CDS 35.0%
GGTTTGATAAAGCTGTTACA+TGG + Chr1:74333969-74333988 MsG0180004167.01.T01:CDS 35.0%
GTCTCCATAAATATTACTGC+CGG - Chr1:74334240-74334259 None:intergenic 35.0%
TAACAAATCAATTGCTGCCT+TGG - Chr1:74332333-74332352 None:intergenic 35.0%
TAGATTTGATGTTCTCTCCT+CGG + Chr1:74333082-74333101 MsG0180004167.01.T01:CDS 35.0%
TCACTTATATGTCAAGTCCT+AGG + Chr1:74332790-74332809 MsG0180004167.01.T01:intron 35.0%
TTGACCGGCAGTAATATTTA+TGG + Chr1:74334233-74334252 MsG0180004167.01.T01:CDS 35.0%
TTGATACAACTTGGAAAGGA+AGG + Chr1:74332922-74332941 MsG0180004167.01.T01:CDS 35.0%
TTGGAAATAACTGTGAGCTT+TGG - Chr1:74333837-74333856 None:intergenic 35.0%
! AAGGAAATGGTGGAATACTA+TGG + Chr1:74334182-74334201 MsG0180004167.01.T01:CDS 35.0%
! ACAAAGTTGATTGAAATGGG+AGG + Chr1:74333591-74333610 MsG0180004167.01.T01:CDS 35.0%
! ACAGTTATTTCCAAACCAAG+CGG + Chr1:74333843-74333862 MsG0180004167.01.T01:CDS 35.0%
! ATTGTTGACAAGTTGAACCA+AGG + Chr1:74331355-74331374 MsG0180004167.01.T01:CDS 35.0%
! CACTTTGAAAGATGTTGTAG+AGG + Chr1:74332083-74332102 MsG0180004167.01.T01:CDS 35.0%
! CTTTGAAAGATGTTGTAGAG+GGG + Chr1:74332085-74332104 MsG0180004167.01.T01:CDS 35.0%
! CTTTGTAGTTAGTTCTCGTT+CGG - Chr1:74333577-74333596 None:intergenic 35.0%
! GAACTGGCTCAATATCAAAT+AGG - Chr1:74331024-74331043 None:intergenic 35.0%
! GACCACAACATTTTGTCTAT+TGG + Chr1:74333929-74333948 MsG0180004167.01.T01:CDS 35.0%
! GATTTCTTTGTTGATGGAGA+AGG + Chr1:74333174-74333193 MsG0180004167.01.T01:CDS 35.0%
! GGTTTTTGTGTCAAAGGAAA+TGG + Chr1:74334169-74334188 MsG0180004167.01.T01:CDS 35.0%
! GTCTTTTGATAAGGTCTATC+CGG + Chr1:74331890-74331909 MsG0180004167.01.T01:CDS 35.0%
! TCAATACTTTGAAAGGGTTC+AGG + Chr1:74331612-74331631 MsG0180004167.01.T01:CDS 35.0%
! TCTACTTGCTAGTTAAATGC+CGG + Chr1:74331167-74331186 MsG0180004167.01.T01:CDS 35.0%
! TCTTTTGATAAGGTCTATCC+GGG + Chr1:74331891-74331910 MsG0180004167.01.T01:CDS 35.0%
! TGATATTGAGCCAGTTCTAA+AGG + Chr1:74331027-74331046 MsG0180004167.01.T01:CDS 35.0%
! TGTAACAGCTTTATCAAACC+AGG - Chr1:74333969-74333988 None:intergenic 35.0%
! TTCTTGAAGATACTAGCTTG+AGG + Chr1:74331815-74331834 MsG0180004167.01.T01:CDS 35.0%
! TTCTTTTTCCTTCCTAATGC+TGG - Chr1:74331488-74331507 None:intergenic 35.0%
! TTTTGTGTCAAAGGAAATGG+TGG + Chr1:74334172-74334191 MsG0180004167.01.T01:CDS 35.0%
!! AACTAGCAATTTGGTGATGA+TGG - Chr1:74333220-74333239 None:intergenic 35.0%
!! AATACCTTTTCAAGCCTAGA+AGG + Chr1:74333463-74333482 MsG0180004167.01.T01:CDS 35.0%
!! AGCCATAGTTAATTTGGTGT+TGG + Chr1:74332888-74332907 MsG0180004167.01.T01:CDS 35.0%
!! AGCTGTAATTCCTTTAGAAC+TGG - Chr1:74331040-74331059 None:intergenic 35.0%
AAACTTTCTGCTTCTGACGA+TGG + Chr1:74333147-74333166 MsG0180004167.01.T01:CDS 40.0%
AAAGCAATTCTTGCAGCCAA+TGG + Chr1:74333333-74333352 MsG0180004167.01.T01:CDS 40.0%
AACTGATCCAGAAACACAAG+AGG + Chr1:74331792-74331811 MsG0180004167.01.T01:CDS 40.0%
AAGGGAATTATTGCTTCCTC+CGG + Chr1:74333042-74333061 MsG0180004167.01.T01:CDS 40.0%
AAGTTACAAGGGATATCGGA+AGG + Chr1:74331212-74331231 MsG0180004167.01.T01:CDS 40.0%
AATTGGCTGAATCACAAGGA+TGG + Chr1:74332267-74332286 MsG0180004167.01.T01:CDS 40.0%
ACATACTTGAGGAGATTGCA+AGG + Chr1:74331416-74331435 MsG0180004167.01.T01:CDS 40.0%
ACTACAAGGTGAGATGCAAA+GGG + Chr1:74331300-74331319 MsG0180004167.01.T01:CDS 40.0%
AGAGATCAGCTATTGAAGGT+TGG + Chr1:74331752-74331771 MsG0180004167.01.T01:CDS 40.0%
AGGAAGTTGAGCAAGTTACA+AGG + Chr1:74331200-74331219 MsG0180004167.01.T01:CDS 40.0%
AGGACTAAGAGATCAGAAAC+AGG + Chr1:74331375-74331394 MsG0180004167.01.T01:CDS 40.0%
AGGTATTCAACTACTCCTTC+TGG - Chr1:74333450-74333469 None:intergenic 40.0%
ATACCGTTATCTCGATCCTT+GGG + Chr1:74332022-74332041 MsG0180004167.01.T01:CDS 40.0%
ATATGTCAAACCTGCAATCG+CGG + Chr1:74332199-74332218 MsG0180004167.01.T01:intron 40.0%
ATCCGAGATAGGAAAAGAGT+TGG + Chr1:74331462-74331481 MsG0180004167.01.T01:CDS 40.0%
ATTGGCTGAATCACAAGGAT+GGG + Chr1:74332268-74332287 MsG0180004167.01.T01:CDS 40.0%
ATTGTCACTGCTGCTAATTG+TGG + Chr1:74332524-74332543 MsG0180004167.01.T01:CDS 40.0%
CAAGGATTGGATCTCTATTG+GGG + Chr1:74331990-74332009 MsG0180004167.01.T01:CDS 40.0%
CATACTTGAGGAGATTGCAA+GGG + Chr1:74331417-74331436 MsG0180004167.01.T01:CDS 40.0%
CATCTTCACTTCTCTGTCAT+TGG - Chr1:74332052-74332071 None:intergenic 40.0%
CGGCAAAGGAAAGAATTAAG+AGG - Chr1:74331676-74331695 None:intergenic 40.0%
CTATCATGAGCTGCACATAA+AGG - Chr1:74333897-74333916 None:intergenic 40.0%
GAGAAATTGGCTGAATCACA+AGG + Chr1:74332263-74332282 MsG0180004167.01.T01:CDS 40.0%
GAGCAAGTTACAAGGGATAT+CGG + Chr1:74331208-74331227 MsG0180004167.01.T01:CDS 40.0%
GAGTCAGAATCATCAAGAAG+TGG - Chr1:74333375-74333394 None:intergenic 40.0%
GAGTTGCTTCAAGAAAGATC+TGG + Chr1:74332356-74332375 MsG0180004167.01.T01:CDS 40.0%
GATAAAGCTGTTACATGGTG+AGG + Chr1:74333974-74333993 MsG0180004167.01.T01:CDS 40.0%
GCTATCGAGAATTTCTGATC+AGG + Chr1:74331270-74331289 MsG0180004167.01.T01:CDS 40.0%
GGAAGTTGAGCAAGTTACAA+GGG + Chr1:74331201-74331220 MsG0180004167.01.T01:CDS 40.0%
GGATTGGAACTCATACCAAT+AGG + Chr1:74330899-74330918 MsG0180004167.01.T01:CDS 40.0%
GTTTCTGATCTCTTAGTCCT+TGG - Chr1:74331375-74331394 None:intergenic 40.0%
TAACCTTGTAACCCTTGTGA+AGG + Chr1:74332430-74332449 MsG0180004167.01.T01:CDS 40.0%
TAAGACAATCGATCGAAGAG+TGG + Chr1:74331851-74331870 MsG0180004167.01.T01:CDS 40.0%
TACAGGTTCAATCACTGCAA+AGG + Chr1:74333770-74333789 MsG0180004167.01.T01:CDS 40.0%
TAGAATAAGAGGAACACCTC+CGG - Chr1:74333064-74333083 None:intergenic 40.0%
TCAAGAACCTCTTGTGTTTC+TGG - Chr1:74331802-74331821 None:intergenic 40.0%
TCACTTAAGGCAGAAGCTTT+AGG + Chr1:74334134-74334153 MsG0180004167.01.T01:CDS 40.0%
TCTTCATCATCTGCAATCTC+TGG + Chr1:74334317-74334336 MsG0180004167.01.T01:CDS 40.0%
TCTTCGATCGATTGTCTTAG+TGG - Chr1:74331850-74331869 None:intergenic 40.0%
TCTTTCCTTTGCCGCATAAA+CGG + Chr1:74331682-74331701 MsG0180004167.01.T01:CDS 40.0%
TGCTTCAAGAAAGATCTGGT+TGG + Chr1:74332360-74332379 MsG0180004167.01.T01:CDS 40.0%
TGTGAGAGATCAGCTATTGA+AGG + Chr1:74331748-74331767 MsG0180004167.01.T01:CDS 40.0%
TTGCAACAGAATTCCAACTC+AGG + Chr1:74333240-74333259 MsG0180004167.01.T01:CDS 40.0%
TTGGAAGCAAATGCTTTACC+TGG + Chr1:74333948-74333967 MsG0180004167.01.T01:CDS 40.0%
TTTCGCGAATGACATACTTG+AGG + Chr1:74331405-74331424 MsG0180004167.01.T01:CDS 40.0%
! AACTCTTTTCCTATCTCGGA+TGG - Chr1:74331463-74331482 None:intergenic 40.0%
! AGAAGGCTAGAAGCTTTGAT+TGG + Chr1:74333480-74333499 MsG0180004167.01.T01:CDS 40.0%
! ATCAAAGCTTCTAGCCTTCT+AGG - Chr1:74333480-74333499 None:intergenic 40.0%
! GGAGAAGGTTTTTGTGTCAA+AGG + Chr1:74334163-74334182 MsG0180004167.01.T01:CDS 40.0%
! GGTGGCGAAGAAAATTTTGA+TGG + Chr1:74332475-74332494 MsG0180004167.01.T01:CDS 40.0%
!! GATCAGGTTGATAGACTACA+AGG + Chr1:74331286-74331305 MsG0180004167.01.T01:CDS 40.0%
!! GTTAGTTCTCGTTCGGATTT+TGG - Chr1:74333570-74333589 None:intergenic 40.0%
!! TCGCGTTTGATTTGTTTGAC+CGG + Chr1:74334218-74334237 MsG0180004167.01.T01:CDS 40.0%
!!! AGCTTTAGGACTTTTGGAGA+AGG + Chr1:74334148-74334167 MsG0180004167.01.T01:CDS 40.0%
!!! ATCTGCAATCTCTGGAGTTT+TGG + Chr1:74334325-74334344 MsG0180004167.01.T01:CDS 40.0%
AAGAGATCAGAAACAGGACC+AGG + Chr1:74331381-74331400 MsG0180004167.01.T01:CDS 45.0%
AATGTACAAATGGCTGCAGC+TGG + Chr1:74333528-74333547 MsG0180004167.01.T01:CDS 45.0%
AGACCTTTCTTTATCAGCCC+TGG + Chr1:74332993-74333012 MsG0180004167.01.T01:CDS 45.0%
AGCTGGATCTCATGCTAACA+AGG + Chr1:74333023-74333042 MsG0180004167.01.T01:CDS 45.0%
ATCCTGCTTCTTCTCTTCTC+AGG + Chr1:74332838-74332857 MsG0180004167.01.T01:intron 45.0%
CACATGTAGTTCCTGTGGAA+AGG - Chr1:74331732-74331751 None:intergenic 45.0%
CAGAAGCAGAAAGTTTCTCG+AGG - Chr1:74333143-74333162 None:intergenic 45.0%
CAGCTATTAGAGCCTGCATT+TGG - Chr1:74331957-74331976 None:intergenic 45.0%
CATGAGCAGTTCTCAAGACT+TGG - Chr1:74330949-74330968 None:intergenic 45.0%
CCATAACAGCTCCGTTTATG+CGG - Chr1:74331696-74331715 None:intergenic 45.0%
CCTTAGAAGGAAAGCTGCTA+AGG + Chr1:74334265-74334284 MsG0180004167.01.T01:CDS 45.0%
CCTTAGCAGCTTTCCTTCTA+AGG - Chr1:74334268-74334287 None:intergenic 45.0%
CGCTGTGACTCGATATTTGT+AGG - Chr1:74333702-74333721 None:intergenic 45.0%
CTTCCCAAGGATCGAGATAA+CGG - Chr1:74332028-74332047 None:intergenic 45.0%
GAAAAGAGTTGGCCAGCATT+AGG + Chr1:74331473-74331492 MsG0180004167.01.T01:CDS 45.0%
GACCTTTCTTTATCAGCCCT+GGG + Chr1:74332994-74333013 MsG0180004167.01.T01:CDS 45.0%
GACTACAAGGTGAGATGCAA+AGG + Chr1:74331299-74331318 MsG0180004167.01.T01:CDS 45.0%
GATACCGTTATCTCGATCCT+TGG + Chr1:74332021-74332040 MsG0180004167.01.T01:CDS 45.0%
GCAATTGCAGCAGCTTTCAT+CGG + Chr1:74333792-74333811 MsG0180004167.01.T01:CDS 45.0%
GCAGCAGCTGATGTTCTTAT+TGG + Chr1:74330968-74330987 MsG0180004167.01.T01:CDS 45.0%
GCAGGTTTATAGCAGTCTCT+CGG - Chr1:74333404-74333423 None:intergenic 45.0%
GCTGAGAGAAAAGAAAGAGC+AGG - Chr1:74333422-74333441 None:intergenic 45.0%
GCTGGATCTCATGCTAACAA+GGG + Chr1:74333024-74333043 MsG0180004167.01.T01:CDS 45.0%
GGTGGAATACTATGGAACGA+CGG + Chr1:74334190-74334209 MsG0180004167.01.T01:CDS 45.0%
GTAATGAATGACCTTGTCCG+AGG - Chr1:74333102-74333121 None:intergenic 45.0%
TACCCAGGGCTGATAAAGAA+AGG - Chr1:74332999-74333018 None:intergenic 45.0%
TATCATTGTCGTCGTTCTCG+AGG - Chr1:74333509-74333528 None:intergenic 45.0%
TATGTCAAACCTGCAATCGC+GGG + Chr1:74332200-74332219 MsG0180004167.01.T01:intron 45.0%
TCGCATGATTCGAGGTAAGA+AGG + Chr1:74332568-74332587 MsG0180004167.01.T01:intron 45.0%
TCTCTCACATGTAGTTCCTG+TGG - Chr1:74331737-74331756 None:intergenic 45.0%
TTCTCTCAGCATGAACCAGA+AGG + Chr1:74333432-74333451 MsG0180004167.01.T01:CDS 45.0%
TTGAAAAACCAGCAACCGCT+TGG - Chr1:74333861-74333880 None:intergenic 45.0%
TTGCTCAACTTCCTCGACAA+TGG - Chr1:74331194-74331213 None:intergenic 45.0%
TTGGGGTAGTGAGTCACTTA+AGG + Chr1:74334121-74334140 MsG0180004167.01.T01:CDS 45.0%
! AGATCCAGCTAGTTTACCCA+GGG - Chr1:74333013-74333032 None:intergenic 45.0%
! CTAGCCTTCTAGGCTTGAAA+AGG - Chr1:74333470-74333489 None:intergenic 45.0%
! GGCCAACTCTTTTCCTATCT+CGG - Chr1:74331467-74331486 None:intergenic 45.0%
! GTTGAGAAGTACAAGAACCG+TGG + Chr1:74331139-74331158 MsG0180004167.01.T01:CDS 45.0%
! TTGCAAGTTCGAGACTGGTT+TGG + Chr1:74333305-74333324 MsG0180004167.01.T01:CDS 45.0%
!! GTTCTCGTTCGGATTTTGGT+AGG - Chr1:74333566-74333585 None:intergenic 45.0%
!!! GGCAGAAGCTTTAGGACTTT+TGG + Chr1:74334142-74334161 MsG0180004167.01.T01:CDS 45.0%
AAACCAGCAACCGCTTGGTT+TGG - Chr1:74333856-74333875 None:intergenic 50.0%
AAATTAGTCCCCGCGATTGC+AGG - Chr1:74332212-74332231 None:intergenic 50.0%
AAGGGATATCGGAAGGTCTC+TGG + Chr1:74331219-74331238 MsG0180004167.01.T01:CDS 50.0%
AATAAGAGGAACACCTCCGG+AGG - Chr1:74333061-74333080 None:intergenic 50.0%
ACCTCTGCTGAATCGTTTCC+AGG - Chr1:74332458-74332477 None:intergenic 50.0%
ACGAAGGTTGTGACCTGAGT+TGG - Chr1:74333256-74333275 None:intergenic 50.0%
AGAATCCCTGAGCCAAATGC+AGG + Chr1:74331942-74331961 MsG0180004167.01.T01:CDS 50.0%
AGAGTTGGCCAGCATTAGGA+AGG + Chr1:74331477-74331496 MsG0180004167.01.T01:CDS 50.0%
ATGGAGACGGACACCTTAGA+AGG + Chr1:74334252-74334271 MsG0180004167.01.T01:CDS 50.0%
ATGTCAAACCTGCAATCGCG+GGG + Chr1:74332201-74332220 MsG0180004167.01.T01:intron 50.0%
CAACTTCCTCGACAATGGAC+CGG - Chr1:74331189-74331208 None:intergenic 50.0%
CCGCATAAACGGAGCTGTTA+TGG + Chr1:74331693-74331712 MsG0180004167.01.T01:CDS 50.0%
CCTCTGCTGAATCGTTTCCA+GGG - Chr1:74332457-74332476 None:intergenic 50.0%
CGAATCATGCGATCAGCTAG+TGG - Chr1:74332560-74332579 None:intergenic 50.0%
CTAGCAAGTAGAAACGGCCA+CGG - Chr1:74331159-74331178 None:intergenic 50.0%
CTAGCTGATCGCATGATTCG+AGG + Chr1:74332560-74332579 MsG0180004167.01.T01:CDS 50.0%
CTCTGTCATTGGACTTCCCA+AGG - Chr1:74332041-74332060 None:intergenic 50.0%
GATGCAAAGGGTTGAGTTCG+AGG + Chr1:74331312-74331331 MsG0180004167.01.T01:CDS 50.0%
GCTTCTTCTCTTCTCAGGAC+CGG + Chr1:74332843-74332862 MsG0180004167.01.T01:intron 50.0%
GGAATTATTGCTTCCTCCGG+AGG + Chr1:74333045-74333064 MsG0180004167.01.T01:CDS 50.0%
GGATTGGATCTCTATTGGGG+AGG + Chr1:74331993-74332012 MsG0180004167.01.T01:CDS 50.0%
GGCATTTGCAAGTTCGAGAC+TGG + Chr1:74333300-74333319 MsG0180004167.01.T01:CDS 50.0%
GGTCCTTCACAAGGGTTACA+AGG - Chr1:74332436-74332455 None:intergenic 50.0%
GTATGTCATTCGCGAAAGCC+TGG - Chr1:74331402-74331421 None:intergenic 50.0%
GTCCTGAGAAGAGAAGAAGC+AGG - Chr1:74332843-74332862 None:intergenic 50.0%
GTTCCTGTGGAAAGGCTAAC+AGG - Chr1:74331724-74331743 None:intergenic 50.0%
GTTTCCAGGGTCCTTCACAA+GGG - Chr1:74332444-74332463 None:intergenic 50.0%
TAAATGCCGGTCCATTGTCG+AGG + Chr1:74331180-74331199 MsG0180004167.01.T01:CDS 50.0%
TATCGAGTCACAGCGCGATT+TGG + Chr1:74333707-74333726 MsG0180004167.01.T01:CDS 50.0%
TCACTGCTGCTAATTGTGGC+TGG + Chr1:74332528-74332547 MsG0180004167.01.T01:CDS 50.0%
TGATGTTCTCTCCTCGGACA+AGG + Chr1:74333088-74333107 MsG0180004167.01.T01:CDS 50.0%
TGGAAACGATTCAGCAGAGG+TGG + Chr1:74332457-74332476 MsG0180004167.01.T01:CDS 50.0%
TTTCCAAACCAAGCGGTTGC+TGG + Chr1:74333850-74333869 MsG0180004167.01.T01:CDS 50.0%
! AGAGGGGCATGCAAGAAACA+AGG + Chr1:74332101-74332120 MsG0180004167.01.T01:CDS 50.0%
! GAGATCCAGCTAGTTTACCC+AGG - Chr1:74333014-74333033 None:intergenic 50.0%
! TAGAGCCTGCATTTGGCTCA+GGG - Chr1:74331950-74331969 None:intergenic 50.0%
! TTAGAGCCTGCATTTGGCTC+AGG - Chr1:74331951-74331970 None:intergenic 50.0%
!! ATTGGAAGAGCATCCGCAGA+GGG + Chr1:74334043-74334062 MsG0180004167.01.T01:CDS 50.0%
!! CAGCGCGATTTGGTTAAACG+CGG + Chr1:74333717-74333736 MsG0180004167.01.T01:CDS 50.0%
!! CTCTAGAGCTGATGCAGCAA+GGG + Chr1:74331570-74331589 MsG0180004167.01.T01:CDS 50.0%
!! GACTCTAGAGCAACTCTAGC+AGG - Chr1:74331085-74331104 None:intergenic 50.0%
!! GATCCTGTTAGCCTTTCCAC+AGG + Chr1:74331718-74331737 MsG0180004167.01.T01:CDS 50.0%
!! TATTGGAAGAGCATCCGCAG+AGG + Chr1:74334042-74334061 MsG0180004167.01.T01:CDS 50.0%
!! TCTCTAGAGCTGATGCAGCA+AGG + Chr1:74331569-74331588 MsG0180004167.01.T01:CDS 50.0%
AACAAACGAGCACCCCTCTG+CGG - Chr1:74334059-74334078 None:intergenic 55.0%
ACGCTCTCAGTGCACTCTTC+AGG + Chr1:74333667-74333686 MsG0180004167.01.T01:CDS 55.0%
CAGCTCCGTTTATGCGGCAA+AGG - Chr1:74331690-74331709 None:intergenic 55.0%
CCAACGCTACGTGCTCTTCT+TGG + Chr1:74333279-74333298 MsG0180004167.01.T01:CDS 55.0%
CCCTGGAAACGATTCAGCAG+AGG + Chr1:74332454-74332473 MsG0180004167.01.T01:CDS 55.0%
CCTATCTCGGATGGTTCCAC+CGG - Chr1:74331454-74331473 None:intergenic 55.0%
CGTTTCCAGGGTCCTTCACA+AGG - Chr1:74332445-74332464 None:intergenic 55.0%
GAGGAGATTGCAAGGGCAGT+TGG + Chr1:74331424-74331443 MsG0180004167.01.T01:CDS 55.0%
GTAACCCTTGTGAAGGACCC+TGG + Chr1:74332437-74332456 MsG0180004167.01.T01:CDS 55.0%
TCAGCCCTGGGTAAACTAGC+TGG + Chr1:74333006-74333025 MsG0180004167.01.T01:CDS 55.0%
! CCAAGAAGAGCACGTAGCGT+TGG - Chr1:74333282-74333301 None:intergenic 55.0%
!! CACGTAGCGTTGGCTTACGA+AGG - Chr1:74333272-74333291 None:intergenic 55.0%
!! TTGGAAGAGCATCCGCAGAG+GGG + Chr1:74334044-74334063 MsG0180004167.01.T01:CDS 55.0%
CCGGTGGAACCATCCGAGAT+AGG + Chr1:74331451-74331470 MsG0180004167.01.T01:CDS 60.0%
TGCAAGGGCAGTTGGCGTGC+CGG + Chr1:74331432-74331451 MsG0180004167.01.T01:CDS 65.0%
AAGGGCAGTTGGCGTGCCGG+TGG + Chr1:74331435-74331454 MsG0180004167.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 74330893 74334352 74330893 ID=MsG0180004167.01;Name=MsG0180004167.01
Chr1 mRNA 74330893 74334352 74330893 ID=MsG0180004167.01.T01;Parent=MsG0180004167.01;Name=MsG0180004167.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|3|0|1013
Chr1 exon 74330893 74332122 74330893 ID=MsG0180004167.01.T01:exon:5520;Parent=MsG0180004167.01.T01
Chr1 exon 74332263 74332581 74332263 ID=MsG0180004167.01.T01:exon:5521;Parent=MsG0180004167.01.T01
Chr1 exon 74332860 74334352 74332860 ID=MsG0180004167.01.T01:exon:5522;Parent=MsG0180004167.01.T01
Chr1 CDS 74330893 74332122 74330893 ID=MsG0180004167.01.T01:cds;Parent=MsG0180004167.01.T01
Chr1 CDS 74332263 74332581 74332263 ID=MsG0180004167.01.T01:cds;Parent=MsG0180004167.01.T01
Chr1 CDS 74332860 74334352 74332860 ID=MsG0180004167.01.T01:cds;Parent=MsG0180004167.01.T01
Gene Sequence

>MsG0180004167.01.T01

ATGGTAGGATTGGAACTCATACCAATAGGTACAATATTAACTGTGGTAACAAGCCAAGTCTTGAGAACTGCTCATGCAGCAGCTGATGTTCTTATTGGAAAAGAGAGTTTCAAGGCACTTTCGAAATACCTATTTGATATTGAGCCAGTTCTAAAGGAATTACAGCTTCAAGAATTGAATGATTCTCAACCTGCTAGAGTTGCTCTAGAGTCTCTTGAAGCAGATGTTAAAAGGGCGAATAATATGGTTGAGAAGTACAAGAACCGTGGCCGTTTCTACTTGCTAGTTAAATGCCGGTCCATTGTCGAGGAAGTTGAGCAAGTTACAAGGGATATCGGAAGGTCTCTGGCTGCACTGTCTATTGCAAATACTGAAGTGCTATCGAGAATTTCTGATCAGGTTGATAGACTACAAGGTGAGATGCAAAGGGTTGAGTTCGAGGCTTCACAGTCTCAGCTTGAAATTGTTGACAAGTTGAACCAAGGACTAAGAGATCAGAAACAGGACCAGGCTTTCGCGAATGACATACTTGAGGAGATTGCAAGGGCAGTTGGCGTGCCGGTGGAACCATCCGAGATAGGAAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTGCGAATAGGAAAGAAAAAGCCGAATTTGTTTTCTTGGAGCAGATCATTAAGTTACTCTCTAGAGCTGATGCAGCAAGGGATTATGAAGAAGTTAAGAATCAATACTTTGAAAGGGTTCAGGTGATAGAGAGATACGATTCAAAGGAAAAATATATCCAACCTCTTAATTCTTTCCTTTGCCGCATAAACGGAGCTGTTATGGTTGATCCTGTTAGCCTTTCCACAGGAACTACATGTGAGAGATCAGCTATTGAAGGTTGGTTTTATGATGGAAACAGAACTGATCCAGAAACACAAGAGGTTCTTGAAGATACTAGCTTGAGGTCAAACATTCCACTAAGACAATCGATCGAAGAGTGGAGAGAACTCAATTATTGTCTTTTGATAAGGTCTATCCGGGAAAATTTGTCGTTAAATTCTGATCTGAAAGAATCCCTGAGCCAAATGCAGGCTCTAATAGCTGAAAATTCTATTAACAAGGATTGGATCTCTATTGGGGAGGTTACTGATACCGTTATCTCGATCCTTGGGAAGTCCAATGACAGAGAAGTGAAGATGAAGATTTTGATCACTTTGAAAGATGTTGTAGAGGGGCATGCAAGAAACAAGGAGAAATTGGCTGAATCACAAGGATGGGATCATATTATTTCGTGCTTGGAAAGCAACTCTAACATTTCCAAGGCAGCAATTGATTTGTTATATGAGTTGCTTCAAGAAAGATCTGGTTGGAATCAATGTTTTTGCAAAAAACTTTCTGAGAACGACACTGCAGTTCTTAACCTTGTAACCCTTGTGAAGGACCCTGGAAACGATTCAGCAGAGGTGGCGAAGAAAATTTTGATGGAGCTTTTTGAAATAAATGAAAGCAGCATTGTCACTGCTGCTAATTGTGGCTGGTATAAGCCACTAGCTGATCGCATGATTCGAGGACCGGATTCAAGAATATCAATGGCAAAAGCCATAGTTAATTTGGTGTTGGATGATTTAAACTTGATACAACTTGGAAAGGAAGGAGTTATAACTCCTTTGATAGAAATGATGTCTGGCAGTATCGAGTCGAAAGACCTTTCTTTATCAGCCCTGGGTAAACTAGCTGGATCTCATGCTAACAAGGGAATTATTGCTTCCTCCGGAGGTGTTCCTCTTATTCTAGATTTGATGTTCTCTCCTCGGACAAGGTCATTCATTACAATTAAATGCTCCGAAATCCTCGAGAAACTTTCTGCTTCTGACGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAAATTGCTAGTTTTGCAACAGAATTCCAACTCAGGTCACAACCTTCGTAAGCCAACGCTACGTGCTCTTCTTGGCATTTGCAAGTTCGAGACTGGTTTGGTGAAGAAAGCAATTCTTGCAGCCAATGGCGTATCTCTAATTCTTCCACTTCTTGATGATTCTGACTCAGAAGTCCGAGAGACTGCTATAAACCTGCTCTTTCTTTTCTCTCAGCATGAACCAGAAGGAGTAGTTGAATACCTTTTCAAGCCTAGAAGGCTAGAAGCTTTGATTGGATTCCTCGAGAACGACGACAATGATAATGTACAAATGGCTGCAGCTGGCTTACTAGCTAACCTACCAAAATCCGAACGAGAACTAACTACAAAGTTGATTGAAATGGGAGGACTTGATGCAATCATAAGCATTTTAAAAACAGGCAAAATGGAAGCAAAAGAAAACGCTCTCAGTGCACTCTTCAGGTTCACAGATCCTACAAATATCGAGTCACAGCGCGATTTGGTTAAACGCGGAATATATCCTTTACTTGTTGATTTTCTCAATACAGGTTCAATCACTGCAAAGGCAATTGCAGCAGCTTTCATCGGCGATCTTTCTATGAGCACACCAAAGCTCACAGTTATTTCCAAACCAAGCGGTTGCTGGTTTTTCAAATCATCGCGCGTTCCTTTATGTGCAGCTCATGATAGCGTATGCAGTGTGACCACAACATTTTGTCTATTGGAAGCAAATGCTTTACCTGGTTTGATAAAGCTGTTACATGGTGAGGTTCATGCAACTGCTTATGAAGCAATACAAACACTTTCTACATTGGTATTGGAAGAGCATCCGCAGAGGGGTGCTCGTTTGTTGCATGAGAAAAATGCAATGAGACCTTTATTGGAGATTTTGACTTGGGGTAGTGAGTCACTTAAGGCAGAAGCTTTAGGACTTTTGGAGAAGGTTTTTGTGTCAAAGGAAATGGTGGAATACTATGGAACGACGGCTAGATCGCGTTTGATTTGTTTGACCGGCAGTAATATTTATGGAGACGGACACCTTAGAAGGAAAGCTGCTAAGGTATTGTCATTGCTTGAACGTTATTCTAGGTCTTCATCATCTGCAATCTCTGGAGTTTTGGAGTGA
Protein sequence

>MsG0180004167.01.T01

MVGLELIPIGTILTVVTSQVLRTAHAAADVLIGKESFKALSKYLFDIEPVLKELQLQELNDSQPARVALESLEADVKRANNMVEKYKNRGRFYLLVKCRSIVEEVEQVTRDIGRSLAALSIANTEVLSRISDQVDRLQGEMQRVEFEASQSQLEIVDKLNQGLRDQKQDQAFANDILEEIARAVGVPVEPSEIGKELASIRKEKEEAANRKEKAEFVFLEQIIKLLSRADAARDYEEVKNQYFERVQVIERYDSKEKYIQPLNSFLCRINGAVMVDPVSLSTGTTCERSAIEGWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELNYCLLIRSIRENLSLNSDLKESLSQMQALIAENSINKDWISIGEVTDTVISILGKSNDREVKMKILITLKDVVEGHARNKEKLAESQGWDHIISCLESNSNISKAAIDLLYELLQERSGWNQCFCKKLSENDTAVLNLVTLVKDPGNDSAEVAKKILMELFEINESSIVTAANCGWYKPLADRMIRGPDSRISMAKAIVNLVLDDLNLIQLGKEGVITPLIEMMSGSIESKDLSLSALGKLAGSHANKGIIASSGGVPLILDLMFSPRTRSFITIKCSEILEKLSASDDGIDFFVDGEGKQLELDSIITKLLVLQQNSNSGHNLRKPTLRALLGICKFETGLVKKAILAANGVSLILPLLDDSDSEVRETAINLLFLFSQHEPEGVVEYLFKPRRLEALIGFLENDDNDNVQMAAAGLLANLPKSERELTTKLIEMGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSITAKAIAAAFIGDLSMSTPKLTVISKPSGCWFFKSSRVPLCAAHDSVCSVTTTFCLLEANALPGLIKLLHGEVHATAYEAIQTLSTLVLEEHPQRGARLLHEKNAMRPLLEILTWGSESLKAEALGLLEKVFVSKEMVEYYGTTARSRLICLTGSNIYGDGHLRRKAAKVLSLLERYSRSSSSAISGVLE*