AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023794.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023794.01.T01 MTR_8g102330 89.313 131 12 1 1 129 1 131 5.04e-84 244
MsG0480023794.01.T01 MTR_6g090030 78.626 131 26 1 1 129 1 131 5.59e-74 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023794.01.T01 AT2G19760 80.469 128 25 0 1 128 1 128 2.10e-75 222
MsG0480023794.01.T01 AT5G56600 79.688 128 26 0 1 128 1 128 5.48e-74 219
MsG0480023794.01.T01 AT4G29350 78.125 128 28 0 1 128 1 128 6.05e-74 219
MsG0480023794.01.T01 AT2G19770 75.758 132 29 1 1 129 1 132 7.27e-73 216
MsG0480023794.01.T01 AT4G29340 75.000 132 30 1 1 129 1 132 1.21e-70 210
MsG0480023794.01.T01 AT5G56600 78.161 87 19 0 1 87 1 87 1.16e-45 146

Find 47 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATAGCAGTTATCTCTTC+AGG 0.316863 4:-89900772 None:intergenic
TATTGGTGGTACTAAATATA+TGG 0.344442 4:+89900840 MsG0480023794.01.T01:CDS
CCAGTTGGAGCAAGAGTTCC+AGG 0.346308 4:-89900811 None:intergenic
GCTCCAACTGGATTACATAT+TGG 0.350525 4:+89900823 MsG0480023794.01.T01:CDS
TGGTGATTATCTTGTTGAAC+AGG 0.360177 4:+89901770 MsG0480023794.01.T01:CDS
ACCAATATGGCCTTGGTCAT+TGG 0.371913 4:+89901693 MsG0480023794.01.T01:CDS
GCCAATGACCAAGGCCATAT+TGG 0.385130 4:-89901694 None:intergenic
TTATATAGTTCATATTTCAT+TGG 0.389355 4:+89901815 MsG0480023794.01.T01:CDS
CCTGGAACTCTTGCTCCAAC+TGG 0.397773 4:+89900811 MsG0480023794.01.T01:CDS
TCGGTGTAGACGGTAGCGTT+TGG 0.405021 4:+89900372 MsG0480023794.01.T01:CDS
CTAAGTAGAATAGCTACAAC+AGG 0.407985 4:+89902453 MsG0480023794.01.T01:CDS
CGGTGTAGACGGTAGCGTTT+GGG 0.413449 4:+89900373 MsG0480023794.01.T01:CDS
TTGCACTGACCGGGAGTCAT+TGG 0.432121 4:-89901729 None:intergenic
ACTATATAAGACATAGGAAT+AGG 0.436879 4:-89901801 None:intergenic
AACTACCATGTTGCACTGAC+CGG 0.438554 4:-89901739 None:intergenic
CATTATATTACCCAGGGTGC+TGG 0.445513 4:+89901651 MsG0480023794.01.T01:intron
TTCCCTCGAATGACAGCTCC+AGG 0.451609 4:-89900877 None:intergenic
CACCTTCTCTGTGACATTGA+AGG 0.461970 4:+89900323 MsG0480023794.01.T01:CDS
AATAAAGACTTCGATGAGCC+TGG 0.476770 4:+89900793 MsG0480023794.01.T01:CDS
ACTAAATATATGGTGATTCA+AGG 0.491883 4:+89900850 MsG0480023794.01.T01:CDS
TACTGTTAAGAAGACCAATA+TGG 0.497722 4:+89901680 MsG0480023794.01.T01:CDS
TAAGAAGACCAATATGGCCT+TGG 0.505382 4:+89901686 MsG0480023794.01.T01:CDS
CTCACTCATGCTGCTATCCT+CGG 0.510155 4:+89900353 MsG0480023794.01.T01:CDS
GCAATCAAGTATTCCATTCG+AGG 0.515054 4:-89901862 None:intergenic
ATGGTGATTCAAGGTGAACC+TGG 0.519803 4:+89900859 MsG0480023794.01.T01:CDS
GAACCTGGAGCTGTCATTCG+AGG 0.527391 4:+89900874 MsG0480023794.01.T01:CDS
AGCTGTCATTCGAGGGAAGA+AGG 0.545445 4:+89900882 MsG0480023794.01.T01:CDS
GCTGCTATCCTCGGTGTAGA+CGG 0.548044 4:+89900362 MsG0480023794.01.T01:CDS
TAGGAGCTGCGTTGAAATCA+CGG 0.549368 4:-89900199 None:intergenic
TCAGAGTGCTAATTTCCCTC+AGG 0.551578 4:+89900397 MsG0480023794.01.T01:CDS
ACTACCATGTTGCACTGACC+GGG 0.553161 4:-89901738 None:intergenic
TATATTACCCAGGGTGCTGG+TGG 0.554953 4:+89901654 MsG0480023794.01.T01:intron
CCAACTGGATTACATATTGG+TGG 0.577382 4:+89900826 MsG0480023794.01.T01:CDS
ATATGAACTATATAAGACAT+AGG 0.583272 4:-89901807 None:intergenic
CGAAAATCATGTTTCCACTC+AGG 0.596604 4:-89902483 None:intergenic
TACCTTCAATGTCACAGAGA+AGG 0.600366 4:-89900325 None:intergenic
ATCATAAATGCCAATGACCA+AGG 0.602159 4:-89901703 None:intergenic
TATGATGAACCAATGACTCC+CGG 0.606226 4:+89901720 MsG0480023794.01.T01:CDS
CCACCAATATGTAATCCAGT+TGG 0.607406 4:-89900826 None:intergenic
AACCTGGAGCTGTCATTCGA+GGG 0.609180 4:+89900875 MsG0480023794.01.T01:CDS
AGTGCAACATGGTAGTTGAA+AGG 0.610554 4:+89901745 MsG0480023794.01.T01:CDS
CAACAGGGATTGCGCCTGAG+TGG 0.613119 4:+89902469 MsG0480023794.01.T01:CDS
GACTCCCGGTCAGTGCAACA+TGG 0.634244 4:+89901734 MsG0480023794.01.T01:CDS
AACATGGTAGTTGAAAGGCT+TGG 0.685081 4:+89901750 MsG0480023794.01.T01:CDS
AATCTCTGTGAAGCATGTCG+TGG 0.689357 4:+89900282 MsG0480023794.01.T01:exon
TAAGTAGAATAGCTACAACA+GGG 0.727371 4:+89902454 MsG0480023794.01.T01:CDS
AAACGCTACCGTCTACACCG+AGG 0.799540 4:-89900370 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTAATAGAGAAAA+TGG - Chr4:89901315-89901334 None:intergenic 10.0%
!! CTGTTAATTAATTAATTAAG+TGG + Chr4:89900631-89900650 MsG0480023794.01.T01:intron 15.0%
!! TTATATAGTTCATATTTCAT+TGG + Chr4:89901815-89901834 MsG0480023794.01.T01:CDS 15.0%
!!! AATTTCTGAATACTTATTTT+GGG + Chr4:89901628-89901647 MsG0480023794.01.T01:intron 15.0%
!!! TAATTTCTGAATACTTATTT+TGG + Chr4:89901627-89901646 MsG0480023794.01.T01:intron 15.0%
!!! TATTTTAATCTTTCAAATTG+AGG + Chr4:89901416-89901435 MsG0480023794.01.T01:intron 15.0%
!! ATATGAACTATATAAGACAT+AGG - Chr4:89901810-89901829 None:intergenic 20.0%
!! ATTGAAAATCTATTTGAAAG+TGG + Chr4:89901334-89901353 MsG0480023794.01.T01:intron 20.0%
!! TAATGCAAATTATTCTCTTT+CGG + Chr4:89902133-89902152 MsG0480023794.01.T01:intron 20.0%
!! TTGAAAATCTATTTGAAAGT+GGG + Chr4:89901335-89901354 MsG0480023794.01.T01:intron 20.0%
!!! AAAATGAAGAAAGATTTTCT+CGG - Chr4:89900254-89900273 None:intergenic 20.0%
!!! AACAGTTAAATGCTATTTAT+TGG + Chr4:89901480-89901499 MsG0480023794.01.T01:intron 20.0%
!!! AATGCCATTTTACTATTTTA+GGG + Chr4:89901206-89901225 MsG0480023794.01.T01:intron 20.0%
!!! ATTGCAGTGTAATAATATTT+TGG + Chr4:89901880-89901899 MsG0480023794.01.T01:intron 20.0%
!!! TAAAAGCACTTTAATGTATA+CGG - Chr4:89902003-89902022 None:intergenic 20.0%
!!! TGGTCAATTTTTTTATTCAA+TGG + Chr4:89901553-89901572 MsG0480023794.01.T01:intron 20.0%
! AAACTGCTCTATTTAATTGT+AGG + Chr4:89901007-89901026 MsG0480023794.01.T01:intron 25.0%
! AATAGCATTTAACTGTTCAA+AGG - Chr4:89901477-89901496 None:intergenic 25.0%
! AATTCTAATGCTATGGTTAT+TGG + Chr4:89902023-89902042 MsG0480023794.01.T01:intron 25.0%
! AATTTCAAAAAGACCAAACA+TGG - Chr4:89901039-89901058 None:intergenic 25.0%
! ACAATTTCAGAAATCACAAT+GGG + Chr4:89901277-89901296 MsG0480023794.01.T01:intron 25.0%
! ACATCCCTAAAATAGTAAAA+TGG - Chr4:89901213-89901232 None:intergenic 25.0%
! ACTAAATATATGGTGATTCA+AGG + Chr4:89900850-89900869 MsG0480023794.01.T01:CDS 25.0%
! ACTATATAAGACATAGGAAT+AGG - Chr4:89901804-89901823 None:intergenic 25.0%
! ATTGATCTGAATAAGTCTTA+TGG + Chr4:89901533-89901552 MsG0480023794.01.T01:intron 25.0%
! CTTATTCAGATCAATATTGA+AGG - Chr4:89901528-89901547 None:intergenic 25.0%
! GAGATTCAATCTAACATAAT+AGG - Chr4:89900987-89901006 None:intergenic 25.0%
! TACAATTTCAGAAATCACAA+TGG + Chr4:89901276-89901295 MsG0480023794.01.T01:intron 25.0%
! TGCATTATGAAAAAATAAGC+TGG - Chr4:89902120-89902139 None:intergenic 25.0%
! TTATACATTGTGAAGTGTAA+TGG + Chr4:89900671-89900690 MsG0480023794.01.T01:intron 25.0%
! TTTGGATTTCATAAAGTTGT+TGG + Chr4:89901898-89901917 MsG0480023794.01.T01:intron 25.0%
!! AAATGAAGAAAGATTTTCTC+GGG - Chr4:89900253-89900272 None:intergenic 25.0%
!! GCTTTTAAATTCTAATGCTA+TGG + Chr4:89902016-89902035 MsG0480023794.01.T01:intron 25.0%
!! GTTCTTTATTTGTAATGTGT+TGG + Chr4:89900724-89900743 MsG0480023794.01.T01:intron 25.0%
!! TAACCTTACACTGATTATTA+AGG + Chr4:89900537-89900556 MsG0480023794.01.T01:intron 25.0%
!! TATTGGTGGTACTAAATATA+TGG + Chr4:89900840-89900859 MsG0480023794.01.T01:CDS 25.0%
!! TTCAAAGCATTACAATATTG+AGG + Chr4:89902279-89902298 MsG0480023794.01.T01:intron 25.0%
!!! GAATGCCATTTTACTATTTT+AGG + Chr4:89901205-89901224 MsG0480023794.01.T01:intron 25.0%
!!! TGTTTGGTCTTTTTGAAATT+AGG + Chr4:89901039-89901058 MsG0480023794.01.T01:intron 25.0%
!!! TTGAAGGTAATTTTTTATGC+AGG - Chr4:89901512-89901531 None:intergenic 25.0%
AGTCAAATTCTCTGATGAAT+CGG - Chr4:89900597-89900616 None:intergenic 30.0%
ATATAAGCAAGTTATTGTGC+AGG - Chr4:89901608-89901627 None:intergenic 30.0%
CAAATGAAGTTCTGTACTTA+GGG + Chr4:89900569-89900588 MsG0480023794.01.T01:intron 30.0%
CATTACAATATTGAGGATTG+TGG + Chr4:89902286-89902305 MsG0480023794.01.T01:intron 30.0%
GAATTAAGTATTTCCATACG+TGG + Chr4:89902165-89902184 MsG0480023794.01.T01:intron 30.0%
GATCCTTAATAATCAGTGTA+AGG - Chr4:89900543-89900562 None:intergenic 30.0%
GTTGTCAATTTAGGAATTTC+AGG + Chr4:89901234-89901253 MsG0480023794.01.T01:intron 30.0%
TAAGTAGAATAGCTACAACA+GGG + Chr4:89902454-89902473 MsG0480023794.01.T01:CDS 30.0%
TACTGTTAAGAAGACCAATA+TGG + Chr4:89901680-89901699 MsG0480023794.01.T01:CDS 30.0%
TGAAAAAATAAGCTGGAACA+CGG - Chr4:89902113-89902132 None:intergenic 30.0%
! ACACGGAGGTATAAATATTA+AGG - Chr4:89902096-89902115 None:intergenic 30.0%
! AGTTTAGGATAAAGCATGTT+GGG - Chr4:89902321-89902340 None:intergenic 30.0%
! CTTTGCAGATTTTATCTATC+TGG + Chr4:89902063-89902082 MsG0480023794.01.T01:intron 30.0%
! TAGTTTAGGATAAAGCATGT+TGG - Chr4:89902322-89902341 None:intergenic 30.0%
! TTGTAATGCTTTGAACAAGT+CGG - Chr4:89902274-89902293 None:intergenic 30.0%
!! CATTTTAGTCACACATTTCA+TGG - Chr4:89901186-89901205 None:intergenic 30.0%
!!! TGTCCTTGTACTTTTTTAGT+GGG + Chr4:89901975-89901994 MsG0480023794.01.T01:intron 30.0%
!!! TTGTCCTTGTACTTTTTTAG+TGG + Chr4:89901974-89901993 MsG0480023794.01.T01:intron 30.0%
AGGGATGTTGTTGTCAATTT+AGG + Chr4:89901225-89901244 MsG0480023794.01.T01:intron 35.0%
ATCATAAATGCCAATGACCA+AGG - Chr4:89901706-89901725 None:intergenic 35.0%
ATCTATGCTATGCTATGCTT+TGG + Chr4:89900952-89900971 MsG0480023794.01.T01:intron 35.0%
ATCTTTCTCTATATCCTCGT+AGG + Chr4:89902221-89902240 MsG0480023794.01.T01:intron 35.0%
CGCAATTCATTCACATAACT+TGG + Chr4:89902406-89902425 MsG0480023794.01.T01:intron 35.0%
CTAAGTAGAATAGCTACAAC+AGG + Chr4:89902453-89902472 MsG0480023794.01.T01:CDS 35.0%
CTAATGCTATGGTTATTGGT+TGG + Chr4:89902027-89902046 MsG0480023794.01.T01:intron 35.0%
GCAAATGAAGTTCTGTACTT+AGG + Chr4:89900568-89900587 MsG0480023794.01.T01:intron 35.0%
TGGTGATTATCTTGTTGAAC+AGG + Chr4:89901770-89901789 MsG0480023794.01.T01:CDS 35.0%
TTTGGGCATTATATTACCCA+GGG + Chr4:89901645-89901664 MsG0480023794.01.T01:intron 35.0%
! ACAACGCTCAGATTTAGTTT+AGG - Chr4:89902336-89902355 None:intergenic 35.0%
! AGATTTTCTCGGGAAAGTTT+TGG - Chr4:89900243-89900262 None:intergenic 35.0%
! GATTTTCTCGGGAAAGTTTT+GGG - Chr4:89900242-89900261 None:intergenic 35.0%
! GTACCCACTAAAAAAGTACA+AGG - Chr4:89901981-89902000 None:intergenic 35.0%
! TTGATAGCAGTTATCTCTTC+AGG - Chr4:89900775-89900794 None:intergenic 35.0%
! TTTTGGGCATTATATTACCC+AGG + Chr4:89901644-89901663 MsG0480023794.01.T01:intron 35.0%
!!! AAAGTTTTGGGTTTTGGGTA+AGG - Chr4:89900230-89900249 None:intergenic 35.0%
AAAAATAAGCTGGAACACGG+AGG - Chr4:89902110-89902129 None:intergenic 40.0%
AACATGGTAGTTGAAAGGCT+TGG + Chr4:89901750-89901769 MsG0480023794.01.T01:CDS 40.0%
AATAAAGACTTCGATGAGCC+TGG + Chr4:89900793-89900812 MsG0480023794.01.T01:CDS 40.0%
AGTGCAACATGGTAGTTGAA+AGG + Chr4:89901745-89901764 MsG0480023794.01.T01:CDS 40.0%
CCAACTGGATTACATATTGG+TGG + Chr4:89900826-89900845 MsG0480023794.01.T01:CDS 40.0%
CCAATCACAGTAACAGAGAT+CGG - Chr4:89900513-89900532 None:intergenic 40.0%
CCACCAATATGTAATCCAGT+TGG - Chr4:89900829-89900848 None:intergenic 40.0%
CGAAAATCATGTTTCCACTC+AGG - Chr4:89902486-89902505 None:intergenic 40.0%
GAGAAAGATTAGCAACAACC+TGG - Chr4:89902210-89902229 None:intergenic 40.0%
GCAATCAAGTATTCCATTCG+AGG - Chr4:89901865-89901884 None:intergenic 40.0%
GCTCCAACTGGATTACATAT+TGG + Chr4:89900823-89900842 MsG0480023794.01.T01:CDS 40.0%
TAAGAAGACCAATATGGCCT+TGG + Chr4:89901686-89901705 MsG0480023794.01.T01:CDS 40.0%
TACCTTCAATGTCACAGAGA+AGG - Chr4:89900328-89900347 None:intergenic 40.0%
TATGATGAACCAATGACTCC+CGG + Chr4:89901720-89901739 MsG0480023794.01.T01:CDS 40.0%
TTGTAGGTTGTTGCCATGTT+TGG + Chr4:89901023-89901042 MsG0480023794.01.T01:intron 40.0%
! CACAAGCATTGCCAATGATA+AGG - Chr4:89901367-89901386 None:intergenic 40.0%
! TGCTTCACAGAGATTTTCTC+AGG - Chr4:89900277-89900296 None:intergenic 40.0%
!! CAGATCGATGGATTGATGAA+AGG - Chr4:89900425-89900444 None:intergenic 40.0%
!! GATTGATGAAAGGTACCTGA+GGG - Chr4:89900415-89900434 None:intergenic 40.0%
!!! TCGGGAAAGTTTTGGGTTTT+GGG - Chr4:89900235-89900254 None:intergenic 40.0%
AAAGTTGTTGGATCTGCGTG+TGG + Chr4:89901910-89901929 MsG0480023794.01.T01:intron 45.0%
AATCTCTGTGAAGCATGTCG+TGG + Chr4:89900282-89900301 MsG0480023794.01.T01:exon 45.0%
ATGGTGATTCAAGGTGAACC+TGG + Chr4:89900859-89900878 MsG0480023794.01.T01:CDS 45.0%
CACCTTCTCTGTGACATTGA+AGG + Chr4:89900323-89900342 MsG0480023794.01.T01:CDS 45.0%
CATTATATTACCCAGGGTGC+TGG + Chr4:89901651-89901670 MsG0480023794.01.T01:intron 45.0%
CCGATCTCTGTTACTGTGAT+TGG + Chr4:89900510-89900529 MsG0480023794.01.T01:intron 45.0%
CTCTATATCCTCGTAGGAGA+CGG + Chr4:89902227-89902246 MsG0480023794.01.T01:intron 45.0%
TAGGAGCTGCGTTGAAATCA+CGG - Chr4:89900202-89900221 None:intergenic 45.0%
TATTTCCATACGTGGCAGAG+TGG + Chr4:89902173-89902192 MsG0480023794.01.T01:intron 45.0%
TCGCGAAAGAAACAGATCGA+TGG - Chr4:89900437-89900456 None:intergenic 45.0%
! AACTACCATGTTGCACTGAC+CGG - Chr4:89901742-89901761 None:intergenic 45.0%
! ACCAATATGGCCTTGGTCAT+TGG + Chr4:89901693-89901712 MsG0480023794.01.T01:CDS 45.0%
! ACTAAATCTGAGCGTTGTCG+CGG + Chr4:89902338-89902357 MsG0480023794.01.T01:intron 45.0%
! GTGGGTTGCAACCTTATCAT+TGG + Chr4:89901353-89901372 MsG0480023794.01.T01:intron 45.0%
! TCAGAGTGCTAATTTCCCTC+AGG + Chr4:89900397-89900416 MsG0480023794.01.T01:CDS 45.0%
!! GGATTGATGAAAGGTACCTG+AGG - Chr4:89900416-89900435 None:intergenic 45.0%
!!! CTCGGGAAAGTTTTGGGTTT+TGG - Chr4:89900236-89900255 None:intergenic 45.0%
!!! GGTTTTGGGTAAGGAGTAGT+AGG - Chr4:89900221-89900240 None:intergenic 45.0%
AACCTGGAGCTGTCATTCGA+GGG + Chr4:89900875-89900894 MsG0480023794.01.T01:CDS 50.0%
AGAGTGGTGTCTTGTAAGCC+AGG + Chr4:89902189-89902208 MsG0480023794.01.T01:intron 50.0%
AGCTGTCATTCGAGGGAAGA+AGG + Chr4:89900882-89900901 MsG0480023794.01.T01:CDS 50.0%
CTCACTCATGCTGCTATCCT+CGG + Chr4:89900353-89900372 MsG0480023794.01.T01:CDS 50.0%
GCCAATGACCAAGGCCATAT+TGG - Chr4:89901697-89901716 None:intergenic 50.0%
! ACTACCATGTTGCACTGACC+GGG - Chr4:89901741-89901760 None:intergenic 50.0%
!! GTTTTTGCGTCGACCTCGAA+TGG + Chr4:89901849-89901868 MsG0480023794.01.T01:CDS 50.0%
!! TATATTACCCAGGGTGCTGG+TGG + Chr4:89901654-89901673 MsG0480023794.01.T01:intron 50.0%
AAACGCTACCGTCTACACCG+AGG - Chr4:89900373-89900392 None:intergenic 55.0%
AGACACCACTCTGCCACGTA+TGG - Chr4:89902181-89902200 None:intergenic 55.0%
AGTAACACCACCAGCACCCT+GGG - Chr4:89901664-89901683 None:intergenic 55.0%
CCAGTTGGAGCAAGAGTTCC+AGG - Chr4:89900814-89900833 None:intergenic 55.0%
CCTGGAACTCTTGCTCCAAC+TGG + Chr4:89900811-89900830 MsG0480023794.01.T01:CDS 55.0%
CGGTGTAGACGGTAGCGTTT+GGG + Chr4:89900373-89900392 MsG0480023794.01.T01:CDS 55.0%
GAACCTGGAGCTGTCATTCG+AGG + Chr4:89900874-89900893 MsG0480023794.01.T01:CDS 55.0%
TCATGACACCGTCTCCTACG+AGG - Chr4:89902238-89902257 None:intergenic 55.0%
TCGGTGTAGACGGTAGCGTT+TGG + Chr4:89900372-89900391 MsG0480023794.01.T01:CDS 55.0%
TTCCCTCGAATGACAGCTCC+AGG - Chr4:89900880-89900899 None:intergenic 55.0%
! GCTGCTATCCTCGGTGTAGA+CGG + Chr4:89900362-89900381 MsG0480023794.01.T01:CDS 55.0%
! TTGCACTGACCGGGAGTCAT+TGG - Chr4:89901732-89901751 None:intergenic 55.0%
!! GCGTGTGGCGAAGAAGTGTT+TGG + Chr4:89901925-89901944 MsG0480023794.01.T01:intron 55.0%
CAACAGGGATTGCGCCTGAG+TGG + Chr4:89902469-89902488 MsG0480023794.01.T01:CDS 60.0%
CAGTAACACCACCAGCACCC+TGG - Chr4:89901665-89901684 None:intergenic 60.0%
GACTCCCGGTCAGTGCAACA+TGG + Chr4:89901734-89901753 MsG0480023794.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89900195 89902512 89900195 ID=MsG0480023794.01;Name=MsG0480023794.01
Chr4 mRNA 89900195 89902512 89900195 ID=MsG0480023794.01.T01;Parent=MsG0480023794.01;Name=MsG0480023794.01.T01;_AED=0.50;_eAED=0.50;_QI=101|0.66|0.5|1|1|1|4|0|185
Chr4 exon 89900195 89900418 89900195 ID=MsG0480023794.01.T01:exon:25377;Parent=MsG0480023794.01.T01
Chr4 exon 89900766 89900903 89900766 ID=MsG0480023794.01.T01:exon:25378;Parent=MsG0480023794.01.T01
Chr4 exon 89901666 89901887 89901666 ID=MsG0480023794.01.T01:exon:25379;Parent=MsG0480023794.01.T01
Chr4 exon 89902438 89902512 89902438 ID=MsG0480023794.01.T01:exon:25380;Parent=MsG0480023794.01.T01
Chr4 five_prime_UTR 89900195 89900295 89900195 ID=MsG0480023794.01.T01:five_prime_utr;Parent=MsG0480023794.01.T01
Chr4 CDS 89900296 89900418 89900296 ID=MsG0480023794.01.T01:cds;Parent=MsG0480023794.01.T01
Chr4 CDS 89900766 89900903 89900766 ID=MsG0480023794.01.T01:cds;Parent=MsG0480023794.01.T01
Chr4 CDS 89901666 89901887 89901666 ID=MsG0480023794.01.T01:cds;Parent=MsG0480023794.01.T01
Chr4 CDS 89902438 89902512 89902438 ID=MsG0480023794.01.T01:cds;Parent=MsG0480023794.01.T01
Gene Sequence

>MsG0480023794.01.T01

ATGTCGTGGCAAGCTTATGTTGATGATCACCTTCTCTGTGACATTGAAGGTAATCATCTCACTCATGCTGCTATCCTCGGTGTAGACGGTAGCGTTTGGGCTCAGAGTGCTAATTTCCCTCAGTTCAAGCCTGAAGAGATAACTGCTATCAATAAAGACTTCGATGAGCCTGGAACTCTTGCTCCAACTGGATTACATATTGGTGGTACTAAATATATGGTGATTCAAGGTGAACCTGGAGCTGTCATTCGAGGGAAGAAGGGTGCTGGTGGTGTTACTGTTAAGAAGACCAATATGGCCTTGGTCATTGGCATTTATGATGAACCAATGACTCCCGGTCAGTGCAACATGGTAGTTGAAAGGCTTGGTGATTATCTTGTTGAACAGGTCTTTAATCCTATTCCTATGTCTTATATAGTTCATATTTCATTGGCTTCTGTGCAAGTTTTTGCGTCGACCTCGAATGGAATACTTGATTGCAGTATTTATAAGAATAAACTAAGTAGAATAGCTACAACAGGGATTGCGCCTGAGTGGAAACATGATTTTCGTTTGTAG
Protein sequence

>MsG0480023794.01.T01

MSWQAYVDDHLLCDIEGNHLTHAAILGVDGSVWAQSANFPQFKPEEITAINKDFDEPGTLAPTGLHIGGTKYMVIQGEPGAVIRGKKGAGGVTVKKTNMALVIGIYDEPMTPGQCNMVVERLGDYLVEQVFNPIPMSYIVHISLASVQVFASTSNGILDCSIYKNKLSRIATTGIAPEWKHDFRL*