Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023927.01.T01 | XP_003630918.2 | 94.792 | 288 | 14 | 1 | 6 | 292 | 2 | 289 | 3.67E-178 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023927.01.T01 | Q9ZU94 | 57.292 | 288 | 113 | 5 | 10 | 292 | 4 | 286 | 1.96E-109 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023927.01.T01 | I3T3Y9 | 94.792 | 288 | 14 | 1 | 6 | 292 | 2 | 289 | 1.75e-178 | 504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004099.01 | MsG0480023927.01 | 0.816899 | 4.359609e-52 | 3.128299e-49 |
| MsG0180006000.01 | MsG0480023927.01 | 0.804125 | 2.510327e-49 | 1.283957e-46 |
| MsG0280010779.01 | MsG0480023927.01 | 0.820662 | 6.092922e-53 | 4.850686e-50 |
| MsG0480023927.01 | MsG0780041063.01 | 0.801760 | 7.733572e-49 | 3.723296e-46 |
| MsG0280006922.01 | MsG0480023927.01 | 0.835686 | 1.452053e-56 | 1.789043e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023927.01.T01 | MTR_8g104990 | 94.796 | 269 | 13 | 1 | 25 | 292 | 14 | 282 | 7.00e-179 | 495 |
| MsG0480023927.01.T01 | MTR_5g078030 | 48.582 | 282 | 136 | 4 | 12 | 290 | 1 | 276 | 2.39e-88 | 265 |
| MsG0480023927.01.T01 | MTR_3g065370 | 46.786 | 280 | 135 | 4 | 11 | 290 | 9 | 274 | 1.63e-85 | 258 |
| MsG0480023927.01.T01 | MTR_1g044580 | 30.662 | 287 | 184 | 7 | 14 | 290 | 8 | 289 | 8.12e-33 | 128 |
| MsG0480023927.01.T01 | MTR_1g073320 | 28.674 | 279 | 185 | 4 | 29 | 295 | 26 | 302 | 1.11e-29 | 115 |
| MsG0480023927.01.T01 | MTR_7g098410 | 27.437 | 277 | 194 | 4 | 16 | 290 | 10 | 281 | 1.30e-26 | 106 |
| MsG0480023927.01.T01 | MTR_1g080350 | 27.758 | 281 | 176 | 11 | 15 | 280 | 17 | 285 | 2.07e-21 | 92.4 |
| MsG0480023927.01.T01 | MTR_1g104890 | 24.818 | 274 | 187 | 7 | 35 | 291 | 39 | 310 | 2.84e-18 | 84.0 |
| MsG0480023927.01.T01 | MTR_1g105615 | 26.778 | 239 | 162 | 5 | 12 | 237 | 8 | 246 | 3.93e-18 | 85.1 |
| MsG0480023927.01.T01 | MTR_1g104890 | 24.427 | 262 | 180 | 6 | 46 | 291 | 51 | 310 | 1.27e-17 | 83.2 |
| MsG0480023927.01.T01 | MTR_6g463660 | 28.033 | 239 | 153 | 5 | 12 | 237 | 12 | 244 | 3.65e-17 | 82.0 |
| MsG0480023927.01.T01 | MTR_6g463660 | 27.778 | 180 | 108 | 5 | 81 | 238 | 192 | 371 | 1.47e-12 | 68.2 |
| MsG0480023927.01.T01 | MTR_6g057680 | 28.033 | 239 | 153 | 5 | 12 | 237 | 12 | 244 | 3.65e-17 | 82.0 |
| MsG0480023927.01.T01 | MTR_6g057680 | 27.778 | 180 | 108 | 5 | 81 | 238 | 192 | 371 | 1.47e-12 | 68.2 |
| MsG0480023927.01.T01 | MTR_1g104890 | 24.427 | 262 | 180 | 6 | 46 | 291 | 51 | 310 | 4.02e-17 | 82.0 |
| MsG0480023927.01.T01 | MTR_1g104890 | 24.818 | 274 | 187 | 7 | 35 | 291 | 39 | 310 | 4.48e-17 | 82.0 |
| MsG0480023927.01.T01 | MTR_6g463830 | 25.417 | 240 | 163 | 4 | 13 | 237 | 6 | 244 | 1.59e-16 | 80.5 |
| MsG0480023927.01.T01 | MTR_6g463830 | 25.967 | 181 | 112 | 5 | 81 | 239 | 192 | 372 | 7.91e-12 | 66.2 |
| MsG0480023927.01.T01 | MTR_8g041690 | 26.633 | 199 | 137 | 3 | 50 | 239 | 43 | 241 | 3.51e-16 | 79.3 |
| MsG0480023927.01.T01 | MTR_6g055960 | 28.095 | 210 | 138 | 3 | 41 | 237 | 28 | 237 | 4.36e-16 | 79.3 |
| MsG0480023927.01.T01 | MTR_6g055960 | 24.221 | 289 | 188 | 9 | 30 | 299 | 267 | 543 | 3.18e-11 | 64.7 |
| MsG0480023927.01.T01 | MTR_6g055960 | 25.543 | 184 | 109 | 4 | 81 | 239 | 185 | 365 | 4.07e-11 | 64.3 |
| MsG0480023927.01.T01 | MTR_2g088980 | 25.926 | 243 | 157 | 7 | 10 | 237 | 4 | 238 | 5.56e-16 | 76.3 |
| MsG0480023927.01.T01 | MTR_6g463400 | 25.738 | 237 | 163 | 4 | 13 | 237 | 8 | 243 | 6.46e-16 | 78.6 |
| MsG0480023927.01.T01 | MTR_6g463400 | 28.177 | 181 | 107 | 5 | 81 | 238 | 191 | 371 | 1.02e-12 | 68.9 |
| MsG0480023927.01.T01 | MTR_8g041710 | 22.222 | 243 | 160 | 5 | 12 | 239 | 10 | 238 | 2.47e-15 | 77.0 |
| MsG0480023927.01.T01 | MTR_7g052020 | 26.800 | 250 | 138 | 9 | 14 | 237 | 1 | 231 | 3.67e-15 | 74.3 |
| MsG0480023927.01.T01 | MTR_1g105650 | 29.167 | 216 | 139 | 5 | 35 | 237 | 33 | 247 | 4.97e-15 | 75.9 |
| MsG0480023927.01.T01 | MTR_4g105540 | 28.111 | 217 | 138 | 7 | 84 | 291 | 80 | 287 | 5.86e-15 | 75.9 |
| MsG0480023927.01.T01 | MTR_2g088930 | 25.123 | 203 | 138 | 5 | 46 | 237 | 39 | 238 | 7.82e-15 | 73.2 |
| MsG0480023927.01.T01 | MTR_7g033135 | 25.105 | 239 | 167 | 6 | 3 | 238 | 2 | 231 | 2.20e-14 | 73.9 |
| MsG0480023927.01.T01 | MTR_5g005480 | 28.571 | 203 | 134 | 4 | 46 | 237 | 41 | 243 | 3.39e-14 | 73.6 |
| MsG0480023927.01.T01 | MTR_3g064080 | 27.570 | 214 | 144 | 5 | 35 | 239 | 28 | 239 | 6.22e-14 | 72.8 |
| MsG0480023927.01.T01 | MTR_0007s0020 | 25.103 | 243 | 161 | 6 | 13 | 237 | 6 | 245 | 6.97e-14 | 72.8 |
| MsG0480023927.01.T01 | MTR_0007s0020 | 25.521 | 192 | 120 | 4 | 71 | 239 | 183 | 374 | 5.78e-13 | 69.7 |
| MsG0480023927.01.T01 | MTR_1g105820 | 25.210 | 238 | 154 | 7 | 16 | 237 | 15 | 244 | 2.40e-13 | 70.9 |
| MsG0480023927.01.T01 | MTR_1g105640 | 24.790 | 238 | 157 | 8 | 17 | 237 | 14 | 246 | 5.47e-13 | 69.7 |
| MsG0480023927.01.T01 | MTR_1g105640 | 24.790 | 238 | 157 | 8 | 17 | 237 | 14 | 246 | 5.73e-13 | 69.7 |
| MsG0480023927.01.T01 | MTR_1g105640 | 24.790 | 238 | 157 | 8 | 17 | 237 | 14 | 246 | 5.90e-13 | 69.7 |
| MsG0480023927.01.T01 | MTR_1g105655 | 22.593 | 270 | 173 | 5 | 46 | 290 | 47 | 305 | 1.15e-12 | 68.9 |
| MsG0480023927.01.T01 | MTR_3g079850 | 29.839 | 248 | 145 | 11 | 17 | 237 | 10 | 255 | 1.71e-12 | 68.2 |
| MsG0480023927.01.T01 | MTR_6g053000 | 25.806 | 217 | 139 | 8 | 13 | 215 | 6 | 214 | 1.98e-12 | 68.2 |
| MsG0480023927.01.T01 | MTR_6g057440 | 30.534 | 131 | 87 | 3 | 13 | 140 | 6 | 135 | 2.47e-12 | 64.3 |
| MsG0480023927.01.T01 | MTR_5g068190 | 25.000 | 248 | 146 | 9 | 15 | 237 | 9 | 241 | 3.17e-12 | 67.4 |
| MsG0480023927.01.T01 | MTR_3g079850 | 29.839 | 248 | 145 | 11 | 17 | 237 | 10 | 255 | 3.19e-12 | 67.4 |
| MsG0480023927.01.T01 | MTR_6g463710 | 24.034 | 233 | 156 | 5 | 84 | 299 | 322 | 550 | 5.04e-12 | 67.0 |
| MsG0480023927.01.T01 | MTR_6g057770 | 24.034 | 233 | 156 | 5 | 84 | 299 | 322 | 550 | 5.13e-12 | 67.0 |
| MsG0480023927.01.T01 | MTR_1g021635 | 23.415 | 205 | 143 | 4 | 46 | 237 | 42 | 245 | 7.88e-12 | 66.2 |
| MsG0480023927.01.T01 | MTR_1g105755 | 22.917 | 240 | 174 | 4 | 8 | 237 | 3 | 241 | 8.01e-12 | 66.2 |
| MsG0480023927.01.T01 | MTR_8g041650 | 27.053 | 207 | 124 | 5 | 50 | 239 | 48 | 244 | 1.22e-11 | 65.9 |
| MsG0480023927.01.T01 | MTR_1g021610 | 22.066 | 213 | 142 | 5 | 42 | 237 | 40 | 245 | 1.66e-11 | 65.5 |
| MsG0480023927.01.T01 | MTR_1g105850 | 24.762 | 210 | 139 | 6 | 43 | 237 | 45 | 250 | 2.67e-11 | 63.9 |
| MsG0480023927.01.T01 | MTR_3g064110 | 23.975 | 317 | 202 | 10 | 14 | 295 | 5 | 317 | 5.48e-11 | 63.5 |
| MsG0480023927.01.T01 | MTR_6g057750 | 25.000 | 248 | 153 | 7 | 81 | 304 | 326 | 564 | 5.73e-11 | 63.9 |
| MsG0480023927.01.T01 | MTR_8g028065 | 24.167 | 240 | 157 | 7 | 13 | 237 | 7 | 236 | 9.55e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023927.01.T01 | AT2G01660 | 57.292 | 288 | 113 | 5 | 10 | 292 | 4 | 286 | 1.68e-110 | 322 |
| MsG0480023927.01.T01 | AT2G01660 | 57.292 | 288 | 113 | 5 | 10 | 292 | 4 | 286 | 2.00e-110 | 322 |
| MsG0480023927.01.T01 | AT5G37660 | 53.401 | 294 | 126 | 5 | 11 | 299 | 8 | 295 | 5.19e-94 | 281 |
| MsG0480023927.01.T01 | AT5G37660 | 54.887 | 266 | 109 | 5 | 11 | 271 | 8 | 267 | 2.53e-92 | 276 |
| MsG0480023927.01.T01 | AT2G01660 | 57.741 | 239 | 93 | 4 | 10 | 245 | 4 | 237 | 3.66e-91 | 272 |
| MsG0480023927.01.T01 | AT1G70690 | 46.392 | 291 | 142 | 6 | 10 | 289 | 4 | 291 | 9.74e-77 | 237 |
| MsG0480023927.01.T01 | AT3G60720 | 39.062 | 256 | 144 | 4 | 32 | 282 | 25 | 273 | 3.08e-55 | 181 |
| MsG0480023927.01.T01 | AT3G60720 | 39.062 | 256 | 144 | 4 | 32 | 282 | 25 | 273 | 4.26e-55 | 181 |
| MsG0480023927.01.T01 | AT3G60720 | 40.465 | 215 | 120 | 3 | 32 | 241 | 25 | 236 | 1.50e-46 | 157 |
| MsG0480023927.01.T01 | AT2G33330 | 29.693 | 293 | 189 | 5 | 14 | 290 | 9 | 300 | 1.80e-31 | 119 |
| MsG0480023927.01.T01 | AT1G04520 | 28.188 | 298 | 195 | 5 | 11 | 291 | 9 | 304 | 1.39e-29 | 114 |
| MsG0480023927.01.T01 | AT5G43980 | 28.520 | 277 | 176 | 7 | 32 | 290 | 24 | 296 | 1.89e-22 | 95.5 |
| MsG0480023927.01.T01 | AT1G63580 | 23.656 | 279 | 186 | 6 | 11 | 273 | 6 | 273 | 1.36e-17 | 81.6 |
| MsG0480023927.01.T01 | AT1G63550 | 26.728 | 217 | 138 | 6 | 37 | 237 | 32 | 243 | 6.65e-17 | 80.1 |
| MsG0480023927.01.T01 | AT5G48540 | 27.941 | 204 | 131 | 4 | 47 | 237 | 35 | 235 | 1.04e-16 | 79.0 |
| MsG0480023927.01.T01 | AT1G63590 | 26.761 | 213 | 138 | 5 | 41 | 237 | 33 | 243 | 2.09e-16 | 78.2 |
| MsG0480023927.01.T01 | AT5G41290 | 27.861 | 201 | 131 | 4 | 49 | 237 | 43 | 241 | 4.34e-16 | 77.4 |
| MsG0480023927.01.T01 | AT3G21990 | 26.141 | 241 | 160 | 6 | 13 | 237 | 10 | 248 | 9.98e-16 | 75.9 |
| MsG0480023927.01.T01 | AT1G63600 | 26.852 | 216 | 135 | 5 | 41 | 237 | 40 | 251 | 1.02e-14 | 73.9 |
| MsG0480023927.01.T01 | AT1G63570 | 27.751 | 209 | 137 | 3 | 41 | 237 | 33 | 239 | 2.56e-14 | 72.4 |
| MsG0480023927.01.T01 | AT1G63570 | 27.751 | 209 | 137 | 3 | 41 | 237 | 33 | 239 | 2.56e-14 | 72.4 |
| MsG0480023927.01.T01 | AT1G63570 | 27.751 | 209 | 137 | 3 | 41 | 237 | 86 | 292 | 5.31e-14 | 72.0 |
| MsG0480023927.01.T01 | AT1G61750 | 24.402 | 209 | 133 | 5 | 46 | 237 | 40 | 240 | 2.13e-13 | 70.1 |
| MsG0480023927.01.T01 | AT3G04370 | 24.138 | 319 | 196 | 10 | 12 | 289 | 1 | 314 | 2.32e-13 | 70.1 |
| MsG0480023927.01.T01 | AT3G22060 | 26.800 | 250 | 146 | 8 | 12 | 237 | 7 | 243 | 2.48e-13 | 68.9 |
| MsG0480023927.01.T01 | AT3G04370 | 24.062 | 320 | 196 | 10 | 12 | 289 | 1 | 315 | 3.28e-13 | 69.3 |
| MsG0480023927.01.T01 | AT3G58310 | 27.126 | 247 | 149 | 9 | 9 | 237 | 15 | 248 | 3.42e-13 | 68.6 |
| MsG0480023927.01.T01 | AT5G41280 | 25.431 | 232 | 158 | 6 | 61 | 280 | 56 | 284 | 4.02e-13 | 68.9 |
| MsG0480023927.01.T01 | AT4G05200 | 25.000 | 236 | 161 | 4 | 14 | 237 | 29 | 260 | 1.54e-12 | 68.6 |
| MsG0480023927.01.T01 | AT4G05200 | 25.000 | 236 | 161 | 4 | 14 | 237 | 11 | 242 | 1.69e-12 | 68.6 |
| MsG0480023927.01.T01 | AT5G41300 | 22.222 | 243 | 175 | 5 | 49 | 279 | 47 | 287 | 3.32e-12 | 66.2 |
| MsG0480023927.01.T01 | AT1G70530 | 28.125 | 224 | 138 | 10 | 85 | 291 | 75 | 292 | 1.68e-11 | 65.5 |
| MsG0480023927.01.T01 | AT1G70530 | 28.125 | 224 | 138 | 10 | 85 | 291 | 75 | 292 | 2.07e-11 | 65.1 |
| MsG0480023927.01.T01 | AT1G70530 | 28.125 | 224 | 138 | 10 | 85 | 291 | 75 | 292 | 2.24e-11 | 64.7 |
Find 73 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTGGGGTGATATGTATT+TGG | 0.196751 | 4:-91333280 | MsG0480023927.01.T01:CDS |
| CAGGGTGTGGCGCAGTGTAC+GGG | 0.291220 | 4:-91333378 | MsG0480023927.01.T01:CDS |
| AAGACACTAGCCATACTAAT+TGG | 0.326123 | 4:-91331595 | MsG0480023927.01.T01:CDS |
| TCAGGGTGTGGCGCAGTGTA+CGG | 0.328071 | 4:-91333379 | MsG0480023927.01.T01:CDS |
| TTGAAATTGCATAGAAATAA+AGG | 0.334610 | 4:+91331483 | None:intergenic |
| CTTCGGATGCGTTTACTAGA+AGG | 0.352140 | 4:-91333476 | MsG0480023927.01.T01:CDS |
| TACAACAATTTCACAGTTCC+CGG | 0.356273 | 4:-91333735 | MsG0480023927.01.T01:CDS |
| CGGAGTGTGGGGATTCTACT+TGG | 0.371257 | 4:-91333296 | MsG0480023927.01.T01:CDS |
| AGCAATGAGTCCAATTAGTA+TGG | 0.405107 | 4:+91331585 | None:intergenic |
| ATACTAATTGGACTCATTGC+TGG | 0.415948 | 4:-91331583 | MsG0480023927.01.T01:CDS |
| GTGAACATTGATCATTGTTA+AGG | 0.420980 | 4:+91333664 | None:intergenic |
| GACACAAACTCTTTCATCTT+CGG | 0.422632 | 4:-91333855 | MsG0480023927.01.T01:CDS |
| GCCCGTGCGGTGAGTCAACT+CGG | 0.442965 | 4:-91333633 | MsG0480023927.01.T01:CDS |
| GGTGGCGCGTTGCAGCTTGA+AGG | 0.451042 | 4:-91333588 | MsG0480023927.01.T01:CDS |
| TTTGATCTCTAGTAAGTGTC+AGG | 0.454235 | 4:-91333352 | MsG0480023927.01.T01:CDS |
| TTCACAAAGCTTGGACAAGA+AGG | 0.456635 | 4:+91331534 | None:intergenic |
| AGTTTCCGACTCAGCAGAGC+CGG | 0.468190 | 4:+91333716 | None:intergenic |
| AAGAAATGTGGACCGTCGAT+TGG | 0.471308 | 4:-91333504 | MsG0480023927.01.T01:CDS |
| CTGTTCTCGTAGGCGGAACC+TGG | 0.474749 | 4:+91333807 | None:intergenic |
| GAAATTGTTGTAGTTTGAAA+AGG | 0.487310 | 4:+91333746 | None:intergenic |
| AGAAATGTGGACCGTCGATT+GGG | 0.492354 | 4:-91333503 | MsG0480023927.01.T01:CDS |
| GAGTTTGTGTCAGAGAATGA+AGG | 0.495190 | 4:+91333867 | None:intergenic |
| AGGGTGTGGCGCAGTGTACG+GGG | 0.495239 | 4:-91333377 | MsG0480023927.01.T01:CDS |
| GGTCACCACGGCACTGAGAA+AGG | 0.496220 | 4:+91333685 | None:intergenic |
| ATTGGACTCATTGCTGGTGT+TGG | 0.497608 | 4:-91331577 | MsG0480023927.01.T01:CDS |
| GGCAATCCAACGGTTGAAAA+CGG | 0.500751 | 4:-91333316 | MsG0480023927.01.T01:CDS |
| GGAGTGTGGGGATTCTACTT+GGG | 0.507307 | 4:-91333295 | MsG0480023927.01.T01:CDS |
| CGCCACACCCTGAAAATCCT+CGG | 0.524752 | 4:+91333389 | None:intergenic |
| ACAAACTCTTTCATCTTCGG+TGG | 0.531696 | 4:-91333852 | MsG0480023927.01.T01:CDS |
| TTGTGAAAAGCAGAGAGGTA+TGG | 0.533046 | 4:-91331518 | MsG0480023927.01.T01:CDS |
| AGTTCCCGGCTCTGCTGAGT+CGG | 0.535502 | 4:-91333721 | MsG0480023927.01.T01:CDS |
| AGTTTGTGTCAGAGAATGAA+GGG | 0.536019 | 4:+91333868 | None:intergenic |
| GTGTCAGAGAATGAAGGGAT+TGG | 0.537658 | 4:+91333873 | None:intergenic |
| AACGGTTGAAAACGGAGTGT+GGG | 0.539343 | 4:-91333308 | MsG0480023927.01.T01:CDS |
| CACTCGCGTGGTAGTAATAA+CGG | 0.542277 | 4:-91333222 | MsG0480023927.01.T01:intron |
| TTCGGATGCGTTTACTAGAA+GGG | 0.549399 | 4:-91333475 | MsG0480023927.01.T01:CDS |
| ACGCGAGTGATCTCCACCTT+CGG | 0.553618 | 4:+91333236 | None:intergenic |
| CAACGGTTGAAAACGGAGTG+TGG | 0.554354 | 4:-91333309 | MsG0480023927.01.T01:CDS |
| AAAGGCTGCTGAGTTGACTA+AGG | 0.558557 | 4:+91333764 | None:intergenic |
| ACAGAAGTGGTTAAGAAATG+TGG | 0.566487 | 4:-91333516 | MsG0480023927.01.T01:CDS |
| TCTCGTTTCAAATACTCACC+AGG | 0.573214 | 4:-91333825 | MsG0480023927.01.T01:CDS |
| TGATCAATGTTCACGTTGCG+TGG | 0.573628 | 4:-91333655 | MsG0480023927.01.T01:CDS |
| AAAATTCTTATAACCACCAT+CGG | 0.574694 | 4:+91333425 | None:intergenic |
| GTGTCAGGATTGTGTTTCTG+AGG | 0.575791 | 4:-91333337 | MsG0480023927.01.T01:CDS |
| TCCCGAGTTGACTCACCGCA+CGG | 0.581151 | 4:+91333631 | None:intergenic |
| CACAAACACAAACACAAACA+TGG | 0.583825 | 4:-91333934 | MsG0480023927.01.T01:CDS |
| TGAGTTCACGCTGTTCTCGT+AGG | 0.584005 | 4:+91333797 | None:intergenic |
| TGCTACGTGCGTTATTCCGA+AGG | 0.586039 | 4:-91333252 | MsG0480023927.01.T01:CDS |
| ACTTATTTACAGTCGTCCGA+TGG | 0.586949 | 4:-91333441 | MsG0480023927.01.T01:CDS |
| CCCGTGCGGTGAGTCAACTC+GGG | 0.587070 | 4:-91333632 | MsG0480023927.01.T01:CDS |
| GTTCACGCTGTTCTCGTAGG+CGG | 0.592613 | 4:+91333800 | None:intergenic |
| GTTTCCGACTCAGCAGAGCC+GGG | 0.593473 | 4:+91333717 | None:intergenic |
| AAGCTGCAACGCGCCACCGT+AGG | 0.595981 | 4:+91333593 | None:intergenic |
| ACCGTCGATTGGGTTGACTT+CGG | 0.598724 | 4:-91333493 | MsG0480023927.01.T01:CDS |
| GGGTGTGGCGCAGTGTACGG+GGG | 0.600102 | 4:-91333376 | MsG0480023927.01.T01:CDS |
| CCCGAGTTGACTCACCGCAC+GGG | 0.602553 | 4:+91333632 | None:intergenic |
| AGAGAATGAAGGGATTGGAA+TGG | 0.608644 | 4:+91333878 | None:intergenic |
| CTGAGTTGACTAAGGAAGTG+AGG | 0.611457 | 4:+91333772 | None:intergenic |
| ACACTATGTTTCGCTACCTA+CGG | 0.611535 | 4:-91333609 | MsG0480023927.01.T01:CDS |
| TCCGAAGTCAACCCAATCGA+CGG | 0.617909 | 4:+91333492 | None:intergenic |
| TATTTACAGTCGTCCGATGG+TGG | 0.619484 | 4:-91333438 | MsG0480023927.01.T01:CDS |
| ACGGTTGAAAACGGAGTGTG+GGG | 0.625310 | 4:-91333307 | MsG0480023927.01.T01:CDS |
| GAGTGTGGGGATTCTACTTG+GGG | 0.628812 | 4:-91333294 | MsG0480023927.01.T01:CDS |
| GTGTTTCTGAGGCAATCCAA+CGG | 0.629753 | 4:-91333326 | MsG0480023927.01.T01:CDS |
| GCTGAGTCGGAAACTGTGTA+CGG | 0.636728 | 4:-91333708 | MsG0480023927.01.T01:CDS |
| TTCACGTTGCGTGGCCCGTG+CGG | 0.637077 | 4:-91333646 | MsG0480023927.01.T01:CDS |
| TACGGCCTTTCTCAGTGCCG+TGG | 0.660453 | 4:-91333690 | MsG0480023927.01.T01:CDS |
| AGTACAAGACAAGACAGAAG+TGG | 0.676307 | 4:-91333529 | MsG0480023927.01.T01:CDS |
| TACGTGCGTTATTCCGAAGG+TGG | 0.683424 | 4:-91333249 | MsG0480023927.01.T01:CDS |
| GAAGGTGGAGATCACTCGCG+TGG | 0.691186 | 4:-91333234 | MsG0480023927.01.T01:CDS |
| CTATGTTTCGCTACCTACGG+TGG | 0.712114 | 4:-91333606 | MsG0480023927.01.T01:CDS |
| GATCATTGTTAAGGTCACCA+CGG | 0.720890 | 4:+91333673 | None:intergenic |
| AAGCTTTGTGAAAAGCAGAG+AGG | 0.747914 | 4:-91331523 | MsG0480023927.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTATTTTTTTATT+TGG | + | Chr4:91333328-91333347 | None:intergenic | 0.0% |
| !! | ATATATGTTAAAACTTAATA+CGG | + | Chr4:91333058-91333077 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAAAATAACAAC+AGG | + | Chr4:91332237-91332256 | None:intergenic | 15.0% |
| !!! | AAGTAATTGTTTTTCTAAAA+GGG | - | Chr4:91333192-91333211 | MsG0480023927.01.T01:intron | 15.0% |
| !!! | TAAGTAATTGTTTTTCTAAA+AGG | - | Chr4:91333191-91333210 | MsG0480023927.01.T01:intron | 15.0% |
| !!! | TACTTAAAATGAATGAATTT+TGG | + | Chr4:91333177-91333196 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATAACAACAGG+AGG | + | Chr4:91332234-91332253 | None:intergenic | 20.0% |
| !! | AAATATTGAATTCACAGTTA+TGG | - | Chr4:91332332-91332351 | MsG0480023927.01.T01:intron | 20.0% |
| !! | ATATGTTATATGATCTATGA+TGG | - | Chr4:91333089-91333108 | MsG0480023927.01.T01:intron | 20.0% |
| !! | GTATAAGACAAAATGAAATT+CGG | + | Chr4:91333679-91333698 | None:intergenic | 20.0% |
| !! | GTGATCAAACTTTATATTAT+TGG | + | Chr4:91332271-91332290 | None:intergenic | 20.0% |
| !! | TAGAGATTAAAGAATACAAA+AGG | + | Chr4:91333253-91333272 | None:intergenic | 20.0% |
| !! | TCAAATTACTGTAATTAGTT+GGG | - | Chr4:91332873-91332892 | MsG0480023927.01.T01:intron | 20.0% |
| !! | TGGTCTAACAATTTAATTAA+GGG | - | Chr4:91332845-91332864 | MsG0480023927.01.T01:intron | 20.0% |
| !! | TTAAAACTTAATACGGATAA+TGG | + | Chr4:91333051-91333070 | None:intergenic | 20.0% |
| !! | TTCTAATGTACTATATGTAT+TGG | + | Chr4:91333024-91333043 | None:intergenic | 20.0% |
| !! | TTGAAATTGCATAGAAATAA+AGG | + | Chr4:91333936-91333955 | None:intergenic | 20.0% |
| !!! | AATATTTTACATTAGCTTTG+TGG | - | Chr4:91333342-91333361 | MsG0480023927.01.T01:CDS | 20.0% |
| !!! | TTTTCATTAGTATTTGGATT+TGG | - | Chr4:91332947-91332966 | MsG0480023927.01.T01:intron | 20.0% |
| ! | AAAATTCTTATAACCACCAT+CGG | + | Chr4:91331994-91332013 | None:intergenic | 25.0% |
| ! | AAATACTAGGTATCATTTCA+TGG | + | Chr4:91333467-91333486 | None:intergenic | 25.0% |
| ! | ATTAAAGAATACAAAAGGCA+TGG | + | Chr4:91333248-91333267 | None:intergenic | 25.0% |
| ! | ATTGTTAGACCAGTTTAATT+AGG | + | Chr4:91332837-91332856 | None:intergenic | 25.0% |
| ! | ATTTGAAAATTATTGAGCCT+GGG | + | Chr4:91333558-91333577 | None:intergenic | 25.0% |
| ! | CTCAAATTACTGTAATTAGT+TGG | - | Chr4:91332872-91332891 | MsG0480023927.01.T01:intron | 25.0% |
| ! | CTGGTCTAACAATTTAATTA+AGG | - | Chr4:91332844-91332863 | MsG0480023927.01.T01:intron | 25.0% |
| ! | GAAATTGTTGTAGTTTGAAA+AGG | + | Chr4:91331673-91331692 | None:intergenic | 25.0% |
| ! | GTTTCTTCATTAATTCAAAG+CGG | + | Chr4:91333420-91333439 | None:intergenic | 25.0% |
| ! | TAGGAGAAATGATAAATACT+AGG | + | Chr4:91333480-91333499 | None:intergenic | 25.0% |
| ! | TATTTGAAAATTATTGAGCC+TGG | + | Chr4:91333559-91333578 | None:intergenic | 25.0% |
| ! | TTGTTAGACCAGTTTAATTA+GGG | + | Chr4:91332836-91332855 | None:intergenic | 25.0% |
| !! | ATGGTGGTTATAAGAATTTT+AGG | - | Chr4:91331994-91332013 | MsG0480023927.01.T01:intron | 25.0% |
| !!! | CTTGAAATGCTGTTTAATTT+TGG | - | Chr4:91333745-91333764 | MsG0480023927.01.T01:CDS | 25.0% |
| !!! | TACGATAATCTTTCGTTTTT+TGG | - | Chr4:91331864-91331883 | MsG0480023927.01.T01:intron | 25.0% |
| !!! | TTTTTTACCCCTAATTAAAC+TGG | - | Chr4:91332825-91332844 | MsG0480023927.01.T01:intron | 25.0% |
| GAAATTCGGTTCAACTTATA+AGG | + | Chr4:91333665-91333684 | None:intergenic | 30.0% | |
| GATTGTCTATCTCAACTATT+TGG | - | Chr4:91332363-91332382 | MsG0480023927.01.T01:intron | 30.0% | |
| GTGAACATTGATCATTGTTA+AGG | + | Chr4:91331755-91331774 | None:intergenic | 30.0% | |
| TATCATACAAAAGCAAAACG+AGG | + | Chr4:91332638-91332657 | None:intergenic | 30.0% | |
| TGTTAGACCAGTTTAATTAG+GGG | + | Chr4:91332835-91332854 | None:intergenic | 30.0% | |
| TTGAAGAGAACATTAACAAG+TGG | - | Chr4:91332474-91332493 | MsG0480023927.01.T01:intron | 30.0% | |
| TTGCTGGTAAATACTTTGTT+GGG | - | Chr4:91332922-91332941 | MsG0480023927.01.T01:intron | 30.0% | |
| ! | TGGGTGTTTTCATTAGTATT+TGG | - | Chr4:91332941-91332960 | MsG0480023927.01.T01:intron | 30.0% |
| ! | TTATTCTTTTTGCTCAGCAA+AGG | - | Chr4:91333283-91333302 | MsG0480023927.01.T01:CDS | 30.0% |
| ! | TTTTACGAGTTTTTTGTTGC+TGG | - | Chr4:91332906-91332925 | MsG0480023927.01.T01:intron | 30.0% |
| !! | TCTGCTTTTCAGACATTATT+AGG | + | Chr4:91333499-91333518 | None:intergenic | 30.0% |
| !! | TTTACATTAGCTTTGTGGAA+AGG | - | Chr4:91333347-91333366 | MsG0480023927.01.T01:CDS | 30.0% |
| AAGACACTAGCCATACTAAT+TGG | - | Chr4:91333821-91333840 | MsG0480023927.01.T01:CDS | 35.0% | |
| ACAGAAGTGGTTAAGAAATG+TGG | - | Chr4:91331900-91331919 | MsG0480023927.01.T01:intron | 35.0% | |
| ACTACACGGATAATACCAAA+AGG | + | Chr4:91332988-91333007 | None:intergenic | 35.0% | |
| AGCAATGAGTCCAATTAGTA+TGG | + | Chr4:91333834-91333853 | None:intergenic | 35.0% | |
| AGTTTGTGTCAGAGAATGAA+GGG | + | Chr4:91331551-91331570 | None:intergenic | 35.0% | |
| ATACTAATTGGACTCATTGC+TGG | - | Chr4:91333833-91333852 | MsG0480023927.01.T01:CDS | 35.0% | |
| CACAAACACAAACACAAACA+TGG | - | Chr4:91331482-91331501 | MsG0480023927.01.T01:CDS | 35.0% | |
| CATGGATCGTTATTGTTCTT+TGG | + | Chr4:91333449-91333468 | None:intergenic | 35.0% | |
| CATTTGCAAACACATGTTAC+TGG | + | Chr4:91333391-91333410 | None:intergenic | 35.0% | |
| GAAATTTCCCATGAACTACA+CGG | + | Chr4:91333002-91333021 | None:intergenic | 35.0% | |
| GACACAAACTCTTTCATCTT+CGG | - | Chr4:91331561-91331580 | MsG0480023927.01.T01:CDS | 35.0% | |
| GTATTATCCGTGTAGTTCAT+GGG | - | Chr4:91332992-91333011 | MsG0480023927.01.T01:intron | 35.0% | |
| GTTGCTGGTAAATACTTTGT+TGG | - | Chr4:91332921-91332940 | MsG0480023927.01.T01:intron | 35.0% | |
| TACAACAATTTCACAGTTCC+CGG | - | Chr4:91331681-91331700 | MsG0480023927.01.T01:intron | 35.0% | |
| TACTTGGGGTGATATGTATT+TGG | - | Chr4:91332136-91332155 | MsG0480023927.01.T01:intron | 35.0% | |
| TTTGATCTCTAGTAAGTGTC+AGG | - | Chr4:91332064-91332083 | MsG0480023927.01.T01:intron | 35.0% | |
| ! | AAAGAATACAAAAGGCATGG+TGG | + | Chr4:91333245-91333264 | None:intergenic | 35.0% |
| ACAAACTCTTTCATCTTCGG+TGG | - | Chr4:91331564-91331583 | MsG0480023927.01.T01:CDS | 40.0% | |
| ACACTATGTTTCGCTACCTA+CGG | - | Chr4:91331807-91331826 | MsG0480023927.01.T01:intron | 40.0% | |
| ACTTATTTACAGTCGTCCGA+TGG | - | Chr4:91331975-91331994 | MsG0480023927.01.T01:intron | 40.0% | |
| AGAGAATGAAGGGATTGGAA+TGG | + | Chr4:91331541-91331560 | None:intergenic | 40.0% | |
| AGTACAAGACAAGACAGAAG+TGG | - | Chr4:91331887-91331906 | MsG0480023927.01.T01:intron | 40.0% | |
| GAGTTTGTGTCAGAGAATGA+AGG | + | Chr4:91331552-91331571 | None:intergenic | 40.0% | |
| GATCATTGTTAAGGTCACCA+CGG | + | Chr4:91331746-91331765 | None:intergenic | 40.0% | |
| GGTATTATCCGTGTAGTTCA+TGG | - | Chr4:91332991-91333010 | MsG0480023927.01.T01:intron | 40.0% | |
| TCTCGTTTCAAATACTCACC+AGG | - | Chr4:91331591-91331610 | MsG0480023927.01.T01:CDS | 40.0% | |
| TGGGTGTGGAAAACTAGAAT+TGG | - | Chr4:91332790-91332809 | MsG0480023927.01.T01:intron | 40.0% | |
| TTCACAAAGCTTGGACAAGA+AGG | + | Chr4:91333885-91333904 | None:intergenic | 40.0% | |
| TTCGGATGCGTTTACTAGAA+GGG | - | Chr4:91331941-91331960 | MsG0480023927.01.T01:intron | 40.0% | |
| TTCGTGCATGTTCGAATTGA+TGG | - | Chr4:91332510-91332529 | MsG0480023927.01.T01:intron | 40.0% | |
| TTGTGAAAAGCAGAGAGGTA+TGG | - | Chr4:91333898-91333917 | MsG0480023927.01.T01:CDS | 40.0% | |
| ! | AACTTCTTCCGAGGATTTTC+AGG | - | Chr4:91332019-91332038 | MsG0480023927.01.T01:intron | 40.0% |
| ! | AAGCTTTGTGAAAAGCAGAG+AGG | - | Chr4:91333893-91333912 | MsG0480023927.01.T01:CDS | 40.0% |
| ! | ACTTCTTCCGAGGATTTTCA+GGG | - | Chr4:91332020-91332039 | MsG0480023927.01.T01:intron | 40.0% |
| ! | TTCTTTTTGCTCAGCAAAGG+AGG | - | Chr4:91333286-91333305 | MsG0480023927.01.T01:CDS | 40.0% |
| !! | TCTCTGCTTTTCACAAAGCT+TGG | + | Chr4:91333894-91333913 | None:intergenic | 40.0% |
| !!! | TTTTAGGACAACTTCTTCCG+AGG | - | Chr4:91332010-91332029 | MsG0480023927.01.T01:intron | 40.0% |
| AACGGTTGAAAACGGAGTGT+GGG | - | Chr4:91332108-91332127 | MsG0480023927.01.T01:intron | 45.0% | |
| AAGAAATGTGGACCGTCGAT+TGG | - | Chr4:91331912-91331931 | MsG0480023927.01.T01:intron | 45.0% | |
| ATTGGACTCATTGCTGGTGT+TGG | - | Chr4:91333839-91333858 | MsG0480023927.01.T01:CDS | 45.0% | |
| CACTCGCGTGGTAGTAATAA+CGG | - | Chr4:91332194-91332213 | MsG0480023927.01.T01:intron | 45.0% | |
| CTTCGGATGCGTTTACTAGA+AGG | - | Chr4:91331940-91331959 | MsG0480023927.01.T01:intron | 45.0% | |
| GGCAATCCAACGGTTGAAAA+CGG | - | Chr4:91332100-91332119 | MsG0480023927.01.T01:intron | 45.0% | |
| GTGTCAGAGAATGAAGGGAT+TGG | + | Chr4:91331546-91331565 | None:intergenic | 45.0% | |
| TATTTACAGTCGTCCGATGG+TGG | - | Chr4:91331978-91331997 | MsG0480023927.01.T01:intron | 45.0% | |
| TGAGATAGCAATAGCATCCC+AGG | - | Chr4:91333538-91333557 | MsG0480023927.01.T01:CDS | 45.0% | |
| TGATCAATGTTCACGTTGCG+TGG | - | Chr4:91331761-91331780 | MsG0480023927.01.T01:intron | 45.0% | |
| ! | AAAGGCTGCTGAGTTGACTA+AGG | + | Chr4:91331655-91331674 | None:intergenic | 45.0% |
| ! | ACGAAGCTACTTGTGCCTTT+TGG | - | Chr4:91332970-91332989 | MsG0480023927.01.T01:intron | 45.0% |
| ! | AGAAATGTGGACCGTCGATT+GGG | - | Chr4:91331913-91331932 | MsG0480023927.01.T01:intron | 45.0% |
| ! | CTGAGTTGACTAAGGAAGTG+AGG | + | Chr4:91331647-91331666 | None:intergenic | 45.0% |
| ! | GTGTCAGGATTGTGTTTCTG+AGG | - | Chr4:91332079-91332098 | MsG0480023927.01.T01:intron | 45.0% |
| !! | GTGTTTCTGAGGCAATCCAA+CGG | - | Chr4:91332090-91332109 | MsG0480023927.01.T01:intron | 45.0% |
| AAGCTGTTGCTCTTCCCATG+TGG | - | Chr4:91332753-91332772 | MsG0480023927.01.T01:intron | 50.0% | |
| ACGGTTGAAAACGGAGTGTG+GGG | - | Chr4:91332109-91332128 | MsG0480023927.01.T01:intron | 50.0% | |
| CAACGGTTGAAAACGGAGTG+TGG | - | Chr4:91332107-91332126 | MsG0480023927.01.T01:intron | 50.0% | |
| CTATGTTTCGCTACCTACGG+TGG | - | Chr4:91331810-91331829 | MsG0480023927.01.T01:intron | 50.0% | |
| GAGTGTGGGGATTCTACTTG+GGG | - | Chr4:91332122-91332141 | MsG0480023927.01.T01:intron | 50.0% | |
| GCTGAGTCGGAAACTGTGTA+CGG | - | Chr4:91331708-91331727 | MsG0480023927.01.T01:intron | 50.0% | |
| GGAGTGTGGGGATTCTACTT+GGG | - | Chr4:91332121-91332140 | MsG0480023927.01.T01:intron | 50.0% | |
| TACGTGCGTTATTCCGAAGG+TGG | - | Chr4:91332167-91332186 | MsG0480023927.01.T01:intron | 50.0% | |
| TCCGAAGTCAACCCAATCGA+CGG | + | Chr4:91331927-91331946 | None:intergenic | 50.0% | |
| TGAGTTCACGCTGTTCTCGT+AGG | + | Chr4:91331622-91331641 | None:intergenic | 50.0% | |
| TGCTACGTGCGTTATTCCGA+AGG | - | Chr4:91332164-91332183 | MsG0480023927.01.T01:intron | 50.0% | |
| TTGCTCTTCCCATGTGGAGT+GGG | - | Chr4:91332759-91332778 | MsG0480023927.01.T01:intron | 50.0% | |
| ! | CACACTCCGTTTTCAACCGT+TGG | + | Chr4:91332109-91332128 | None:intergenic | 50.0% |
| !! | ACCGTCGATTGGGTTGACTT+CGG | - | Chr4:91331923-91331942 | MsG0480023927.01.T01:intron | 50.0% |
| !! | TTCCGAGGATTTTCAGGGTG+TGG | - | Chr4:91332025-91332044 | MsG0480023927.01.T01:intron | 50.0% |
| ACCTCCATACCCACTCCACA+TGG | + | Chr4:91332771-91332790 | None:intergenic | 55.0% | |
| ACGCGAGTGATCTCCACCTT+CGG | + | Chr4:91332183-91332202 | None:intergenic | 55.0% | |
| AGTTTCCGACTCAGCAGAGC+CGG | + | Chr4:91331703-91331722 | None:intergenic | 55.0% | |
| ATGTGGAGTGGGTATGGAGG+TGG | - | Chr4:91332770-91332789 | MsG0480023927.01.T01:intron | 55.0% | |
| CCTCCATACCCACTCCACAT+GGG | + | Chr4:91332770-91332789 | None:intergenic | 55.0% | |
| CGCCACACCCTGAAAATCCT+CGG | + | Chr4:91332030-91332049 | None:intergenic | 55.0% | |
| CGGAGTGTGGGGATTCTACT+TGG | - | Chr4:91332120-91332139 | MsG0480023927.01.T01:intron | 55.0% | |
| CTTCCCATGTGGAGTGGGTA+TGG | - | Chr4:91332764-91332783 | MsG0480023927.01.T01:intron | 55.0% | |
| GTTCACGCTGTTCTCGTAGG+CGG | + | Chr4:91331619-91331638 | None:intergenic | 55.0% | |
| GTTGCTCTTCCCATGTGGAG+TGG | - | Chr4:91332758-91332777 | MsG0480023927.01.T01:intron | 55.0% | |
| TGTGGAGTGGGTATGGAGGT+GGG | - | Chr4:91332771-91332790 | MsG0480023927.01.T01:intron | 55.0% | |
| AGTGGGTATGGAGGTGGGTG+TGG | - | Chr4:91332776-91332795 | MsG0480023927.01.T01:intron | 60.0% | |
| AGTTCCCGGCTCTGCTGAGT+CGG | - | Chr4:91331695-91331714 | MsG0480023927.01.T01:intron | 60.0% | |
| CCCATGTGGAGTGGGTATGG+AGG | - | Chr4:91332767-91332786 | MsG0480023927.01.T01:intron | 60.0% | |
| CTGTTCTCGTAGGCGGAACC+TGG | + | Chr4:91331612-91331631 | None:intergenic | 60.0% | |
| GAAGGTGGAGATCACTCGCG+TGG | - | Chr4:91332182-91332201 | MsG0480023927.01.T01:intron | 60.0% | |
| GTTTCCGACTCAGCAGAGCC+GGG | + | Chr4:91331702-91331721 | None:intergenic | 60.0% | |
| TACGGCCTTTCTCAGTGCCG+TGG | - | Chr4:91331726-91331745 | MsG0480023927.01.T01:intron | 60.0% | |
| TCAGGGTGTGGCGCAGTGTA+CGG | - | Chr4:91332037-91332056 | MsG0480023927.01.T01:intron | 60.0% | |
| ! | GGTCACCACGGCACTGAGAA+AGG | + | Chr4:91331734-91331753 | None:intergenic | 60.0% |
| ! | TCCCGAGTTGACTCACCGCA+CGG | + | Chr4:91331788-91331807 | None:intergenic | 60.0% |
| AAGCTGCAACGCGCCACCGT+AGG | + | Chr4:91331826-91331845 | None:intergenic | 65.0% | |
| AGGGTGTGGCGCAGTGTACG+GGG | - | Chr4:91332039-91332058 | MsG0480023927.01.T01:intron | 65.0% | |
| CAGGGTGTGGCGCAGTGTAC+GGG | - | Chr4:91332038-91332057 | MsG0480023927.01.T01:intron | 65.0% | |
| CCCGTGCGGTGAGTCAACTC+GGG | - | Chr4:91331784-91331803 | MsG0480023927.01.T01:intron | 65.0% | |
| GCCCGTGCGGTGAGTCAACT+CGG | - | Chr4:91331783-91331802 | MsG0480023927.01.T01:intron | 65.0% | |
| GGTGGCGCGTTGCAGCTTGA+AGG | - | Chr4:91331828-91331847 | MsG0480023927.01.T01:intron | 65.0% | |
| TTCACGTTGCGTGGCCCGTG+CGG | - | Chr4:91331770-91331789 | MsG0480023927.01.T01:intron | 65.0% | |
| ! | CCCGAGTTGACTCACCGCAC+GGG | + | Chr4:91331787-91331806 | None:intergenic | 65.0% |
| GGGTGTGGCGCAGTGTACGG+GGG | - | Chr4:91332040-91332059 | MsG0480023927.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 91331468 | 91333970 | 91331468 | ID=MsG0480023927.01;Name=MsG0480023927.01 |
| Chr4 | mRNA | 91331468 | 91333970 | 91331468 | ID=MsG0480023927.01.T01;Parent=MsG0480023927.01;Name=MsG0480023927.01.T01;_AED=0.49;_eAED=0.51;_QI=0|1|0|1|1|1|2|0|309 |
| Chr4 | exon | 91333223 | 91333970 | 91333223 | ID=MsG0480023927.01.T01:exon:13266;Parent=MsG0480023927.01.T01 |
| Chr4 | exon | 91331468 | 91331649 | 91331468 | ID=MsG0480023927.01.T01:exon:13265;Parent=MsG0480023927.01.T01 |
| Chr4 | CDS | 91333223 | 91333970 | 91333223 | ID=MsG0480023927.01.T01:cds;Parent=MsG0480023927.01.T01 |
| Chr4 | CDS | 91331468 | 91331649 | 91331468 | ID=MsG0480023927.01.T01:cds;Parent=MsG0480023927.01.T01 |
| Gene Sequence |
| Protein sequence |
