AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023955.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023955.01.T01 MTR_2g026080 72.197 223 26 2 66 287 212 399 2.50e-102 306
MsG0480023955.01.T01 MTR_4g133620 57.207 222 58 3 66 285 209 395 1.64e-69 221
MsG0480023955.01.T01 MTR_7g051910 43.612 227 86 5 67 292 207 392 1.83e-49 169
MsG0480023955.01.T01 MTR_5g097620 36.530 219 100 6 67 284 254 434 3.72e-36 135
MsG0480023955.01.T01 MTR_8g009880 34.545 220 105 6 67 285 214 395 9.01e-33 125
MsG0480023955.01.T01 MTR_5g093520 32.836 201 95 4 67 266 228 389 1.47e-30 119
MsG0480023955.01.T01 MTR_3g058510 31.193 218 103 7 58 272 204 377 1.43e-21 94.4
MsG0480023955.01.T01 MTR_8g028075 31.980 197 91 6 66 262 400 553 3.28e-18 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023955.01.T01 AT3G25290 45.794 214 74 5 67 279 220 392 6.06e-57 189
MsG0480023955.01.T01 AT3G25290 45.794 214 74 5 67 279 220 392 6.06e-57 189
MsG0480023955.01.T01 AT5G47530 43.750 224 85 4 67 289 211 394 2.80e-56 187
MsG0480023955.01.T01 AT4G17280 45.413 218 78 4 67 283 219 396 1.12e-54 183
MsG0480023955.01.T01 AT4G12980 42.788 208 78 4 67 273 221 388 3.58e-51 174
MsG0480023955.01.T01 AT5G35735 43.478 230 79 6 66 285 210 398 1.72e-50 172
MsG0480023955.01.T01 AT2G04850 31.963 219 110 5 65 282 217 397 3.84e-27 110
MsG0480023955.01.T01 AT3G59070 33.617 235 113 7 26 258 179 372 1.24e-24 103
MsG0480023955.01.T01 AT3G07570 29.381 194 93 5 66 258 212 362 1.57e-16 79.7
MsG0480023955.01.T01 AT5G48750 42.308 78 43 2 26 102 176 252 1.10e-11 64.3

Find 112 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATAGATTGGGTTCTATAT+TGG 0.218702 4:+91653480 MsG0480023955.01.T01:three_prime_UTR
CTTGGGGATCTTGATGCCTT+TGG 0.236519 4:+91650942 MsG0480023955.01.T01:CDS
CAGCGGATCGCTACGATAAC+TGG 0.249372 4:+91651697 MsG0480023955.01.T01:CDS
AGCATCGTCAACATCTTTAA+AGG 0.254895 4:+91651651 MsG0480023955.01.T01:CDS
TAGAGGGACAATGGGATATT+TGG 0.257183 4:+91653310 MsG0480023955.01.T01:three_prime_UTR
CTTTAAAGGGTTTGAGGCCT+TGG 0.269499 4:+91651665 MsG0480023955.01.T01:CDS
TATAGATTGGGTTCTATATT+GGG 0.279264 4:+91653481 MsG0480023955.01.T01:three_prime_UTR
TTGGGGATCTTGATGCCTTT+GGG 0.305249 4:+91650943 MsG0480023955.01.T01:CDS
CGCTATAGTCAACGGCAATA+TGG 0.318045 4:-91647903 None:intergenic
CTTCTGCCTTGGAACCCTTC+AGG 0.326027 4:+91651149 MsG0480023955.01.T01:CDS
GATGGCCTAATAGTTGGATT+AGG 0.334457 4:-91653608 None:intergenic
GGGTGGCATTGCTGTACTTT+TGG 0.352817 4:+91651752 MsG0480023955.01.T01:CDS
GCCTATATAGTTGGTGTTGT+TGG 0.365208 4:+91651048 MsG0480023955.01.T01:CDS
ATGACATGATACTTATAGAT+TGG 0.369608 4:+91653468 MsG0480023955.01.T01:three_prime_UTR
TGTGCCCTAATCCAACTATT+AGG 0.379826 4:+91653603 MsG0480023955.01.T01:three_prime_UTR
GGAACAAATGGTGATGGATA+TGG 0.390681 4:+91651840 MsG0480023955.01.T01:CDS
AGTGTTCCACCATTGTTTGA+TGG 0.394571 4:+91653674 MsG0480023955.01.T01:three_prime_UTR
AAGTTGTTAATGATTTCATT+AGG 0.396201 4:+91653546 MsG0480023955.01.T01:three_prime_UTR
TTACTGGAACCTTTACCATT+GGG 0.402298 4:+91651602 MsG0480023955.01.T01:CDS
TCTCATTTGCACAAGATTTG+AGG 0.408431 4:-91650344 None:intergenic
GCATCGTCAACATCTTTAAA+GGG 0.410141 4:+91651652 MsG0480023955.01.T01:CDS
CACCGGCATTATTGCAGCAT+TGG 0.411749 4:+91651731 MsG0480023955.01.T01:CDS
AAATTTCTGCTACTGAATAC+AGG 0.416329 4:+91651565 MsG0480023955.01.T01:CDS
GCAACAGATGGCCTAATAGT+TGG 0.417698 4:-91653614 None:intergenic
TTGTTGAATGCAGTGAGCTT+GGG 0.419751 4:+91650925 MsG0480023955.01.T01:CDS
CAACATCTTTAAAGGGTTTG+AGG 0.424624 4:+91651659 MsG0480023955.01.T01:CDS
CACATGGATCATTGTGATCA+AGG 0.425681 4:+91651782 MsG0480023955.01.T01:CDS
TAAAGGGTTTGAGGCCTTGG+AGG 0.436696 4:+91651668 MsG0480023955.01.T01:CDS
ACCGGCATTATTGCAGCATT+GGG 0.442443 4:+91651732 MsG0480023955.01.T01:CDS
ATGGCCTAATAGTTGGATTA+GGG 0.445772 4:-91653607 None:intergenic
ATTACTGGAACCTTTACCAT+TGG 0.446900 4:+91651601 MsG0480023955.01.T01:CDS
AACAAGTTGCAAGGAATGAA+TGG 0.449100 4:+91651819 MsG0480023955.01.T01:CDS
TAGGTTTGAGAGAATGACTA+TGG 0.451333 4:+91653565 MsG0480023955.01.T01:three_prime_UTR
TGACATGATACTTATAGATT+GGG 0.452945 4:+91653469 MsG0480023955.01.T01:three_prime_UTR
TCTCAACCTCACCAGCTGAT+AGG 0.454244 4:-91651939 None:intergenic
TCTTTAACTAGCTATCACTA+TGG 0.455155 4:+91651885 MsG0480023955.01.T01:CDS
GGTTCTATATTGGGCAAAAG+AGG 0.465154 4:+91653490 MsG0480023955.01.T01:three_prime_UTR
TCCAACAACACCAACTATAT+AGG 0.465181 4:-91651049 None:intergenic
AAAAGTTCGACACTGCAATC+TGG 0.465465 4:-91651471 None:intergenic
GTGACGACCTTGAGGAGAAT+TGG 0.467513 4:+91647955 MsG0480023955.01.T01:CDS
ATATAGTTGGTGTTGTTGGA+TGG 0.468787 4:+91651052 MsG0480023955.01.T01:CDS
GGGATCATCCTCTTCTGCCT+TGG 0.469155 4:+91651138 MsG0480023955.01.T01:CDS
ATGGGGTACCAGTGTCAAGC+TGG 0.469313 4:+91651071 MsG0480023955.01.T01:CDS
AGAACAAGCACAAATGTTAG+AGG 0.472788 4:+91653293 MsG0480023955.01.T01:three_prime_UTR
CAATCAGCTGCCTATATAGT+TGG 0.487496 4:+91651039 MsG0480023955.01.T01:CDS
TATAGTTGGTGTTGTTGGAT+GGG 0.488603 4:+91651053 MsG0480023955.01.T01:CDS
CAACTATATAGGCAGCTGAT+TGG 0.489184 4:-91651038 None:intergenic
GAGTTGCATCAAGTTGAAGA+TGG 0.493345 4:+91653431 MsG0480023955.01.T01:three_prime_UTR
AACCTTTACCATTGGGGTGT+CGG 0.496844 4:+91651609 MsG0480023955.01.T01:CDS
CTAGTTAAAGAAGGTTTGAT+CGG 0.497373 4:-91651873 None:intergenic
TCAAAACAGCAGACCCTGCT+TGG 0.497546 4:+91650995 MsG0480023955.01.T01:CDS
TGCACCTATCACTGCAAAAG+TGG 0.498118 4:+91653352 MsG0480023955.01.T01:three_prime_UTR
AAAGTGGATATCTACAGCTT+TGG 0.498218 4:+91653368 MsG0480023955.01.T01:three_prime_UTR
TGCAACACCTTTGCAACAGA+TGG 0.502830 4:-91653626 None:intergenic
ATCCGACACCCCAATGGTAA+AGG 0.503836 4:-91651611 None:intergenic
ACAAATGTTAGAGGGACAAT+GGG 0.506091 4:+91653302 MsG0480023955.01.T01:three_prime_UTR
TTTGAGAGAATGACTATGGT+TGG 0.507037 4:+91653569 MsG0480023955.01.T01:three_prime_UTR
GTTCTATATTGGGCAAAAGA+GGG 0.512150 4:+91653491 MsG0480023955.01.T01:three_prime_UTR
CAAGGAATGAATGGAACAAA+TGG 0.513242 4:+91651828 MsG0480023955.01.T01:CDS
ATTGTTGAATGCAGTGAGCT+TGG 0.516397 4:+91650924 MsG0480023955.01.T01:CDS
TGGGATATTTGGCACCTGAA+TGG 0.525828 4:+91653321 MsG0480023955.01.T01:three_prime_UTR
TAGTGATAGCTAGTTAAAGA+AGG 0.533712 4:-91651882 None:intergenic
TTAGAATTTGAGGCAGTGGA+GGG 0.535724 4:+91650318 MsG0480023955.01.T01:intron
CATTAACAACTTCAACATCA+TGG 0.537170 4:-91653535 None:intergenic
CATAACATAGCATTCAAAAG+AGG 0.537973 4:-91651514 None:intergenic
CACAAATGTTAGAGGGACAA+TGG 0.540064 4:+91653301 MsG0480023955.01.T01:three_prime_UTR
ATAGTTGGTGTTGTTGGATG+GGG 0.542051 4:+91651054 MsG0480023955.01.T01:CDS
ACATGAAGGTAAAACCAAGC+AGG 0.551666 4:-91651009 None:intergenic
CTTCAGACTCTCCTATCAGC+TGG 0.555801 4:+91651928 MsG0480023955.01.T01:CDS
ACATGGATCATTGTGATCAA+GGG 0.556201 4:+91651783 MsG0480023955.01.T01:CDS
TGTGATTGCAAGGTACTTGA+AGG 0.556632 4:+91650969 MsG0480023955.01.T01:CDS
TACTGGAACCTTTACCATTG+GGG 0.557881 4:+91651603 MsG0480023955.01.T01:CDS
GTCATACCTGAAGGGTTCCA+AGG 0.560992 4:-91651155 None:intergenic
ATGAATGGAACAAATGGTGA+TGG 0.561375 4:+91651834 MsG0480023955.01.T01:CDS
GGCATTATTGCAGCATTGGG+TGG 0.561938 4:+91651735 MsG0480023955.01.T01:CDS
GAAGGGTTCCAAGGCAGAAG+AGG 0.567005 4:-91651146 None:intergenic
TTTAGAATTTGAGGCAGTGG+AGG 0.567604 4:+91650317 MsG0480023955.01.T01:intron
ATCCGCTGCAGACACCTCCA+AGG 0.570140 4:-91651682 None:intergenic
CAAATCTTGTGCAAATGAGA+AGG 0.574297 4:+91650347 MsG0480023955.01.T01:CDS
CAAGTTGAAGATGGAACAGA+AGG 0.575586 4:+91653440 MsG0480023955.01.T01:three_prime_UTR
TATTCAACTCATAGAACACT+CGG 0.580467 4:+91651117 MsG0480023955.01.T01:CDS
GGCCTTGGAGGTGTCTGCAG+CGG 0.586267 4:+91651680 MsG0480023955.01.T01:CDS
TGTTGAATGCAGTGAGCTTG+GGG 0.586957 4:+91650926 MsG0480023955.01.T01:CDS
CTGAAGAGTACCTTTGATGA+TGG 0.587300 4:-91651911 None:intergenic
CTTTGGGAGCTGTGATTGCA+AGG 0.589874 4:+91650959 MsG0480023955.01.T01:CDS
GTCACTTCCCAGCTTGACAC+TGG 0.590603 4:-91651079 None:intergenic
AACTGGAAGCATGCATACAC+CGG 0.591645 4:+91651714 MsG0480023955.01.T01:CDS
CTGATTGGCATGTAACATGA+AGG 0.594508 4:-91651023 None:intergenic
TGGGGTACCAGTGTCAAGCT+GGG 0.597010 4:+91651072 MsG0480023955.01.T01:CDS
TATTAGGCCATCTGTTGCAA+AGG 0.598187 4:+91653619 MsG0480023955.01.T01:three_prime_UTR
TGTGGTACCAATTCTCCTCA+AGG 0.599089 4:-91647962 None:intergenic
TTCTATATTGGGCAAAAGAG+GGG 0.600711 4:+91653492 MsG0480023955.01.T01:three_prime_UTR
CATGGATCATTGTGATCAAG+GGG 0.602789 4:+91651784 MsG0480023955.01.T01:CDS
AAATCAGAGAACAAGTTGCA+AGG 0.608640 4:+91651810 MsG0480023955.01.T01:CDS
ACCCAATGCTGCAATAATGC+CGG 0.613184 4:-91651733 None:intergenic
AAAGATGTTGACGATGCTGA+TGG 0.614883 4:-91651646 None:intergenic
AAGGTGTTGCAGATGTCGGA+AGG 0.614948 4:+91653638 MsG0480023955.01.T01:three_prime_UTR
TTGCGTATCCGACACCCCAA+TGG 0.617721 4:-91651617 None:intergenic
ACTATGGCCACCATCATCAA+AGG 0.619655 4:+91651901 MsG0480023955.01.T01:CDS
AAGCTGGGAAGTGACTTAGC+TGG 0.624386 4:+91651087 MsG0480023955.01.T01:CDS
TGCAAAGGTGTTGCAGATGT+CGG 0.624440 4:+91653634 MsG0480023955.01.T01:three_prime_UTR
CATCATGGGTGACGACCTTG+AGG 0.626538 4:+91647947 MsG0480023955.01.T01:CDS
GAACAAGCACAAATGTTAGA+GGG 0.627687 4:+91653294 MsG0480023955.01.T01:three_prime_UTR
ATTATCAACGCTATAGTCAA+CGG 0.629093 4:-91647911 None:intergenic
CATGTAATGTCATACCTGAA+GGG 0.633570 4:-91651163 None:intergenic
GTTGAAGATGGAACAGAAGG+TGG 0.634859 4:+91653443 MsG0480023955.01.T01:three_prime_UTR
CATGAAGGTAAAACCAAGCA+GGG 0.639212 4:-91651008 None:intergenic
TAGAATTTGAGGCAGTGGAG+GGG 0.643151 4:+91650319 MsG0480023955.01.T01:intron
CTTGCAATCACAGCTCCCAA+AGG 0.665524 4:-91650958 None:intergenic
AAGAGTACCTTTGATGATGG+TGG 0.669893 4:-91651908 None:intergenic
ATTCAACTCATAGAACACTC+GGG 0.675546 4:+91651118 MsG0480023955.01.T01:CDS
GAATGACTATGGTTGGACTG+TGG 0.741878 4:+91653576 MsG0480023955.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAGTATATAAAGTATTA+GGG + Chr4:91649178-91649197 MsG0480023955.01.T01:intron 10.0%
!! TAAGTTTATTGTTAATGATT+TGG + Chr4:91650478-91650497 MsG0480023955.01.T01:intron 15.0%
!! TAGCATTTATAGAAAAAAAT+TGG - Chr4:91652157-91652176 None:intergenic 15.0%
!! TTGAAATAAGTAATTTAGAA+TGG - Chr4:91649363-91649382 None:intergenic 15.0%
!!! AATAAAATTAAAGTACCATA+GGG - Chr4:91648711-91648730 None:intergenic 15.0%
!!! CTAAAAGTATATAAAGTATT+AGG + Chr4:91649177-91649196 MsG0480023955.01.T01:intron 15.0%
!!! GAAAAAAGATTTTAAACTAA+AGG - Chr4:91649576-91649595 None:intergenic 15.0%
!!! TAATAAAATTAAAGTACCAT+AGG - Chr4:91648712-91648731 None:intergenic 15.0%
!!! TATGCAAATCATTTTAAAAA+AGG - Chr4:91652969-91652988 None:intergenic 15.0%
!!! TTCTCATATAATTTTTTCAA+AGG - Chr4:91653033-91653052 None:intergenic 15.0%
!! AAAGTTTCTATAGATAAAGA+AGG - Chr4:91652268-91652287 None:intergenic 20.0%
!! AAATCTCATTGTTATATCAT+TGG + Chr4:91650666-91650685 MsG0480023955.01.T01:intron 20.0%
!! AAGATTCTTGTTAATTTAAG+TGG + Chr4:91648225-91648244 MsG0480023955.01.T01:intron 20.0%
!! AAGTTGTTAATGATTTCATT+AGG + Chr4:91653546-91653565 MsG0480023955.01.T01:three_prime_UTR 20.0%
!! ACAAAAAGTAATGTAAGATT+GGG - Chr4:91649550-91649569 None:intergenic 20.0%
!! ATTTCATTAAATAATGCACT+TGG - Chr4:91652647-91652666 None:intergenic 20.0%
!! GACACAAAAAAAAAAACAAA+TGG - Chr4:91652625-91652644 None:intergenic 20.0%
!! GTTATTATTGAATTGATACT+TGG + Chr4:91649429-91649448 MsG0480023955.01.T01:intron 20.0%
!! TAAAATTCAAACTTGAAATG+TGG + Chr4:91650585-91650604 MsG0480023955.01.T01:intron 20.0%
!! TAATTCAGAACTGAATAAAT+CGG + Chr4:91650417-91650436 MsG0480023955.01.T01:intron 20.0%
!! TATATAATTCATAAACACTC+TGG - Chr4:91648507-91648526 None:intergenic 20.0%
!! TGATACATTTGTATTTAGTT+TGG + Chr4:91648477-91648496 MsG0480023955.01.T01:intron 20.0%
!! TTAAACAAAAGCTTGAAAAA+AGG - Chr4:91652096-91652115 None:intergenic 20.0%
!!! AAAAAGAAGTTTTAGACTTT+AGG - Chr4:91652051-91652070 None:intergenic 20.0%
!!! AAAATTTTTCCATCAAACAA+TGG - Chr4:91653686-91653705 None:intergenic 20.0%
!!! AAAGAGTTAATTTTGTGAAA+TGG + Chr4:91649099-91649118 MsG0480023955.01.T01:intron 20.0%
!!! AAGAGTTAATTTTGTGAAAT+GGG + Chr4:91649100-91649119 MsG0480023955.01.T01:intron 20.0%
!!! ATATTCTGTTATTTGAGATT+TGG + Chr4:91648453-91648472 MsG0480023955.01.T01:intron 20.0%
!!! ATTGATTTACCTAATTAGTT+TGG + Chr4:91652721-91652740 MsG0480023955.01.T01:intron 20.0%
!!! GTTTTCTTTTTTAGAATTTG+AGG + Chr4:91650308-91650327 MsG0480023955.01.T01:intron 20.0%
!!! TACATCTGATTATTTTTTTC+AGG + Chr4:91650798-91650817 MsG0480023955.01.T01:intron 20.0%
!!! TATTGTTAATGATTTGGTTT+TGG + Chr4:91650484-91650503 MsG0480023955.01.T01:intron 20.0%
!!! TCAAGCTTTTGTTTAATTTA+TGG + Chr4:91652100-91652119 MsG0480023955.01.T01:intron 20.0%
!!! TGTTTATTGACTTTGTATTT+TGG + Chr4:91648420-91648439 MsG0480023955.01.T01:intron 20.0%
!!! TTGAAATCTTATTTTGTAGA+AGG + Chr4:91653402-91653421 MsG0480023955.01.T01:three_prime_UTR 20.0%
!!! TTGTTAATTGTTGATTAAGA+TGG + Chr4:91648063-91648082 MsG0480023955.01.T01:intron 20.0%
! AAGTGAGTATCTTGAAAATT+AGG - Chr4:91648785-91648804 None:intergenic 25.0%
! AATAGTACTTATGTGCATAT+GGG - Chr4:91649069-91649088 None:intergenic 25.0%
! ACCTACTCTTATATATTTGT+TGG + Chr4:91650049-91650068 MsG0480023955.01.T01:intron 25.0%
! ATAGAATTTAGGTAAGTTCT+TGG + Chr4:91652544-91652563 MsG0480023955.01.T01:intron 25.0%
! ATAGTATGAGCTAATAATCA+CGG + Chr4:91652858-91652877 MsG0480023955.01.T01:intron 25.0%
! ATGACATGATACTTATAGAT+TGG + Chr4:91653468-91653487 MsG0480023955.01.T01:three_prime_UTR 25.0%
! ATGTATGAATTGTGGTTATT+CGG + Chr4:91648565-91648584 MsG0480023955.01.T01:intron 25.0%
! CAATTAATTGAAACATAGTG+TGG - Chr4:91652705-91652724 None:intergenic 25.0%
! CACAAAAAGTAATGTAAGAT+TGG - Chr4:91649551-91649570 None:intergenic 25.0%
! CACACTAATTTCAACTTATT+AGG - Chr4:91652787-91652806 None:intergenic 25.0%
! CCTACTCTTATATATTTGTT+GGG + Chr4:91650050-91650069 MsG0480023955.01.T01:intron 25.0%
! CTAATTTCAACTTATTAGGA+AGG - Chr4:91652783-91652802 None:intergenic 25.0%
! GAAAATATCACACATTCTAA+TGG - Chr4:91648944-91648963 None:intergenic 25.0%
! GAACTTACCTAAATTCTATT+AGG - Chr4:91652543-91652562 None:intergenic 25.0%
! TAATAGTACTTATGTGCATA+TGG - Chr4:91649070-91649089 None:intergenic 25.0%
! TACTAAGAAATCACTCAATT+CGG - Chr4:91648839-91648858 None:intergenic 25.0%
! TATAGATTGGGTTCTATATT+GGG + Chr4:91653481-91653500 MsG0480023955.01.T01:three_prime_UTR 25.0%
! TCATTTGAATTATCCATAAC+AGG + Chr4:91649986-91650005 MsG0480023955.01.T01:intron 25.0%
! TGACATGATACTTATAGATT+GGG + Chr4:91653469-91653488 MsG0480023955.01.T01:three_prime_UTR 25.0%
! TTATAGATTGGGTTCTATAT+TGG + Chr4:91653480-91653499 MsG0480023955.01.T01:three_prime_UTR 25.0%
! TTCAAACTTCCAAACTAATT+AGG - Chr4:91652733-91652752 None:intergenic 25.0%
! TTTACCGCTTAATAGAAATA+GGG + Chr4:91648631-91648650 MsG0480023955.01.T01:intron 25.0%
!! ACTTCATTTTGTATGTTTGA+AGG + Chr4:91650692-91650711 MsG0480023955.01.T01:intron 25.0%
!! CATTTTGCCTAATAGAATTT+AGG + Chr4:91652533-91652552 MsG0480023955.01.T01:intron 25.0%
!! CTAATAAGTTGAAATTAGTG+TGG + Chr4:91652785-91652804 MsG0480023955.01.T01:intron 25.0%
!! CTCAAAATTAAAGCATGTTT+TGG + Chr4:91653239-91653258 MsG0480023955.01.T01:intron 25.0%
!! GTTGTAGAAAAGTATAATGA+TGG - Chr4:91649918-91649937 None:intergenic 25.0%
!! TGCATATTCATTATGCATTT+TGG + Chr4:91652983-91653002 MsG0480023955.01.T01:intron 25.0%
!! TTTTACCGCTTAATAGAAAT+AGG + Chr4:91648630-91648649 MsG0480023955.01.T01:intron 25.0%
!!! AATTAAAGCATGTTTTGGAA+TGG + Chr4:91653244-91653263 MsG0480023955.01.T01:intron 25.0%
!!! ACTTCTTTTATTTGGTGATT+TGG + Chr4:91650862-91650881 MsG0480023955.01.T01:intron 25.0%
!!! AGAAGCATTTGTAAAATTGA+AGG - Chr4:91649823-91649842 None:intergenic 25.0%
!!! ATTAGTGTGGTTTTTCAATT+TGG + Chr4:91652798-91652817 MsG0480023955.01.T01:intron 25.0%
!!! TCTGGTTTACTTCTTTTATT+TGG + Chr4:91650854-91650873 MsG0480023955.01.T01:intron 25.0%
!!! TTAATTGTTTTTCTGACTCA+TGG + Chr4:91650901-91650920 MsG0480023955.01.T01:CDS 25.0%
AAAAAGTGAAATACCTGAAG+CGG - Chr4:91650211-91650230 None:intergenic 30.0%
AAATGAAATAAAGACCTACC+AGG - Chr4:91649004-91649023 None:intergenic 30.0%
AAATTTCTGCTACTGAATAC+AGG + Chr4:91651565-91651584 MsG0480023955.01.T01:CDS 30.0%
AACAAATTTCATATTCAGCC+AGG - Chr4:91648815-91648834 None:intergenic 30.0%
AATGAAATAAAGACCTACCA+GGG - Chr4:91649003-91649022 None:intergenic 30.0%
ACTGTTAGAATGAGTAAACA+TGG + Chr4:91649858-91649877 MsG0480023955.01.T01:intron 30.0%
ACTTATTAGGAAGGATAAAG+AGG - Chr4:91652774-91652793 None:intergenic 30.0%
AGCTATAGTTTACTTGCAAA+AGG - Chr4:91653221-91653240 None:intergenic 30.0%
ATCTCATTCAGCCAAAAATA+TGG - Chr4:91652840-91652859 None:intergenic 30.0%
ATTATCAACGCTATAGTCAA+CGG - Chr4:91647914-91647933 None:intergenic 30.0%
CAACATCAGAACAACAAAAA+AGG - Chr4:91650241-91650260 None:intergenic 30.0%
CAGAATTAAAACGAAGTTGT+TGG + Chr4:91650727-91650746 MsG0480023955.01.T01:intron 30.0%
CATAACATAGCATTCAAAAG+AGG - Chr4:91651517-91651536 None:intergenic 30.0%
CATTAACAACTTCAACATCA+TGG - Chr4:91653538-91653557 None:intergenic 30.0%
CCCAACAAATATATAAGAGT+AGG - Chr4:91650053-91650072 None:intergenic 30.0%
CTATAAACTACTTACGTACA+AGG + Chr4:91651332-91651351 MsG0480023955.01.T01:intron 30.0%
CTCTGTTCATACAAATTTGA+AGG - Chr4:91649210-91649229 None:intergenic 30.0%
CTTCATACTAAGAAAGAAGA+AGG + Chr4:91652368-91652387 MsG0480023955.01.T01:intron 30.0%
GAAGAAAACCACCATATTAT+CGG - Chr4:91652396-91652415 None:intergenic 30.0%
GAATTGATACTTGGTTGTAA+TGG + Chr4:91649438-91649457 MsG0480023955.01.T01:intron 30.0%
GCTTATATTCATGTGATTTC+TGG + Chr4:91649268-91649287 MsG0480023955.01.T01:intron 30.0%
TAATATCTCTACTCCTGTTA+TGG - Chr4:91650002-91650021 None:intergenic 30.0%
TAATTGAAACATAGTGTGGT+TGG - Chr4:91652701-91652720 None:intergenic 30.0%
TATGTCCATCTAACTCAAAA+TGG - Chr4:91652217-91652236 None:intergenic 30.0%
TATTCAACTCATAGAACACT+CGG + Chr4:91651117-91651136 MsG0480023955.01.T01:CDS 30.0%
TTTACAAATGCTTCTACTGT+TGG + Chr4:91649828-91649847 MsG0480023955.01.T01:intron 30.0%
! ACAATATTAGTTGCTTTGAC+AGG + Chr4:91650178-91650197 MsG0480023955.01.T01:intron 30.0%
! AGTTAATTTTGTGAAATGGG+TGG + Chr4:91649103-91649122 MsG0480023955.01.T01:intron 30.0%
! ATTTTTCCATCAAACAATGG+TGG - Chr4:91653683-91653702 None:intergenic 30.0%
! GGTGATTTGGAAATTGATTA+AGG + Chr4:91650875-91650894 MsG0480023955.01.T01:intron 30.0%
! GTTAATTTTGTGAAATGGGT+GGG + Chr4:91649104-91649123 MsG0480023955.01.T01:intron 30.0%
! TATATTCATGTGATTTCTGG+AGG + Chr4:91649271-91649290 MsG0480023955.01.T01:intron 30.0%
! TGTGTGATATTTTCTGACTA+TGG + Chr4:91648950-91648969 MsG0480023955.01.T01:intron 30.0%
! TTATATATTTGTTGGGTTGC+AGG + Chr4:91650057-91650076 MsG0480023955.01.T01:intron 30.0%
!! AACACCCTATTTCTATTAAG+CGG - Chr4:91648638-91648657 None:intergenic 30.0%
!! ATGATGTTTTTGTTGCATCA+TGG + Chr4:91647932-91647951 MsG0480023955.01.T01:CDS 30.0%
!! TGATGTTTTTGTTGCATCAT+GGG + Chr4:91647933-91647952 MsG0480023955.01.T01:CDS 30.0%
!! TGGTTGTAATGGATTAGTAT+GGG + Chr4:91649449-91649468 MsG0480023955.01.T01:intron 30.0%
!! TTGGTTGTAATGGATTAGTA+TGG + Chr4:91649448-91649467 MsG0480023955.01.T01:intron 30.0%
!!! AAGAAGTTTTAGACTTTAGG+AGG - Chr4:91652048-91652067 None:intergenic 30.0%
!!! ATGGTTTTGAAAGATAGACA+TGG + Chr4:91649877-91649896 MsG0480023955.01.T01:intron 30.0%
!!! CGTTTTAATTCTGACATCAT+GGG - Chr4:91650720-91650739 None:intergenic 30.0%
!!! GTTTTAATTCTGACATCATG+GGG - Chr4:91650719-91650738 None:intergenic 30.0%
!!! TCGTTTTAATTCTGACATCA+TGG - Chr4:91650721-91650740 None:intergenic 30.0%
!!! TTTTTTAGAATTTGAGGCAG+TGG + Chr4:91650314-91650333 MsG0480023955.01.T01:intron 30.0%
AAAAACTATCTACCTTGAGG+TGG - Chr4:91650774-91650793 None:intergenic 35.0%
AAAGTGGATATCTACAGCTT+TGG + Chr4:91653368-91653387 MsG0480023955.01.T01:three_prime_UTR 35.0%
AAATCAGAGAACAAGTTGCA+AGG + Chr4:91651810-91651829 MsG0480023955.01.T01:CDS 35.0%
AACAAGTTGCAAGGAATGAA+TGG + Chr4:91651819-91651838 MsG0480023955.01.T01:CDS 35.0%
ACAAATGTTAGAGGGACAAT+GGG + Chr4:91653302-91653321 MsG0480023955.01.T01:three_prime_UTR 35.0%
ACATGGATCATTGTGATCAA+GGG + Chr4:91651783-91651802 MsG0480023955.01.T01:CDS 35.0%
ACATGTAATGTCATACCTGA+AGG - Chr4:91651167-91651186 None:intergenic 35.0%
AGAACAAGCACAAATGTTAG+AGG + Chr4:91653293-91653312 MsG0480023955.01.T01:three_prime_UTR 35.0%
AGAAGAAGGAACCGATAATA+TGG + Chr4:91652382-91652401 MsG0480023955.01.T01:intron 35.0%
AGAAGCTAAACTAATTGAGC+AGG - Chr4:91648743-91648762 None:intergenic 35.0%
AGCATCGTCAACATCTTTAA+AGG + Chr4:91651651-91651670 MsG0480023955.01.T01:CDS 35.0%
AGGTTTCATCTAGCTAACAT+TGG - Chr4:91649803-91649822 None:intergenic 35.0%
ATGAATGGAACAAATGGTGA+TGG + Chr4:91651834-91651853 MsG0480023955.01.T01:CDS 35.0%
ATGGCCTAATAGTTGGATTA+GGG - Chr4:91653610-91653629 None:intergenic 35.0%
ATGTGTGTATGATACACTTG+TGG + Chr4:91648097-91648116 MsG0480023955.01.T01:intron 35.0%
ATTACTGGAACCTTTACCAT+TGG + Chr4:91651601-91651620 MsG0480023955.01.T01:CDS 35.0%
ATTCAACTCATAGAACACTC+GGG + Chr4:91651118-91651137 MsG0480023955.01.T01:CDS 35.0%
ATTCACCAACAAGTATGCAA+TGG - Chr4:91648009-91648028 None:intergenic 35.0%
CAAATCTTGTGCAAATGAGA+AGG + Chr4:91650347-91650366 MsG0480023955.01.T01:CDS 35.0%
CAAGGAATGAATGGAACAAA+TGG + Chr4:91651828-91651847 MsG0480023955.01.T01:CDS 35.0%
CAATTGATCGATCTAAACCA+TGG - Chr4:91650611-91650630 None:intergenic 35.0%
CAGAAAAACTATCTACCTTG+AGG - Chr4:91650777-91650796 None:intergenic 35.0%
CAGAGACATATAGTTCATTG+CGG - Chr4:91650838-91650857 None:intergenic 35.0%
CATGTAATGTCATACCTGAA+GGG - Chr4:91651166-91651185 None:intergenic 35.0%
CCACAATTCATACATGCATA+AGG - Chr4:91648560-91648579 None:intergenic 35.0%
CCATACTTTATCATCAGTGA+AGG + Chr4:91650104-91650123 MsG0480023955.01.T01:intron 35.0%
CCTTATGCATGTATGAATTG+TGG + Chr4:91648557-91648576 MsG0480023955.01.T01:intron 35.0%
CCTTCACTGATGATAAAGTA+TGG - Chr4:91650107-91650126 None:intergenic 35.0%
CGTGAAGCTTCAATTTATAC+AGG + Chr4:91652012-91652031 MsG0480023955.01.T01:intron 35.0%
CTTTAATTGTGCTTCTGATG+AGG + Chr4:91652290-91652309 MsG0480023955.01.T01:intron 35.0%
GAACAAGCACAAATGTTAGA+GGG + Chr4:91653294-91653313 MsG0480023955.01.T01:three_prime_UTR 35.0%
GATTTCTTAGTAGAGACTAG+AGG + Chr4:91648847-91648866 MsG0480023955.01.T01:intron 35.0%
GCATCGTCAACATCTTTAAA+GGG + Chr4:91651652-91651671 MsG0480023955.01.T01:CDS 35.0%
GGTGCAAAAAACTACAAAGA+TGG - Chr4:91650086-91650105 None:intergenic 35.0%
GGTTTCATCTAGCTAACATT+GGG - Chr4:91649802-91649821 None:intergenic 35.0%
GTTCTATATTGGGCAAAAGA+GGG + Chr4:91653491-91653510 MsG0480023955.01.T01:three_prime_UTR 35.0%
TAGCATTCATTAGCTGTTAC+AGG + Chr4:91649230-91649249 MsG0480023955.01.T01:intron 35.0%
TAGGTTTGAGAGAATGACTA+TGG + Chr4:91653565-91653584 MsG0480023955.01.T01:three_prime_UTR 35.0%
TATATTATTCCGCTGCTATG+TGG + Chr4:91648523-91648542 MsG0480023955.01.T01:intron 35.0%
TCATGCAAGTGTCTAGATTA+GGG + Chr4:91648370-91648389 MsG0480023955.01.T01:intron 35.0%
TCCAACAACACCAACTATAT+AGG - Chr4:91651052-91651071 None:intergenic 35.0%
TCCATCTAACTCAAAATGGA+AGG - Chr4:91652213-91652232 None:intergenic 35.0%
TCTCATTTGCACAAGATTTG+AGG - Chr4:91650347-91650366 None:intergenic 35.0%
TCTTGAAAGATCCTCGTTAA+TGG - Chr4:91652511-91652530 None:intergenic 35.0%
TGTACGATGGTGTTTAAACT+TGG - Chr4:91653183-91653202 None:intergenic 35.0%
TTACTGGAACCTTTACCATT+GGG + Chr4:91651602-91651621 MsG0480023955.01.T01:CDS 35.0%
TTATCATCAGTGAAGGTTCA+AGG + Chr4:91650111-91650130 MsG0480023955.01.T01:intron 35.0%
TTCATGCAAGTGTCTAGATT+AGG + Chr4:91648369-91648388 MsG0480023955.01.T01:intron 35.0%
TTCATTAGCTGTTACAGGTA+TGG + Chr4:91649235-91649254 MsG0480023955.01.T01:intron 35.0%
TTCTATATTGGGCAAAAGAG+GGG + Chr4:91653492-91653511 MsG0480023955.01.T01:three_prime_UTR 35.0%
TTTACACAGTCAAGTGATTC+AGG + Chr4:91650536-91650555 MsG0480023955.01.T01:intron 35.0%
TTTGAGAGAATGACTATGGT+TGG + Chr4:91653569-91653588 MsG0480023955.01.T01:three_prime_UTR 35.0%
! ATATGCAAGAAAGTGTACGA+TGG - Chr4:91653196-91653215 None:intergenic 35.0%
! CAACATCTTTAAAGGGTTTG+AGG + Chr4:91651659-91651678 MsG0480023955.01.T01:CDS 35.0%
! GGTTTTTGCTCTGTTATTAC+TGG + Chr4:91651586-91651605 MsG0480023955.01.T01:CDS 35.0%
! GTTTGAAGTGTTATCAGACA+TGG - Chr4:91651977-91651996 None:intergenic 35.0%
! TGGAGAAATTTGTTTCCCTA+TGG + Chr4:91648693-91648712 MsG0480023955.01.T01:intron 35.0%
! TTCAAGTGCAGCCATATTTT+TGG + Chr4:91652826-91652845 MsG0480023955.01.T01:intron 35.0%
! TTGCATACTTGTTGGTGAAT+TGG + Chr4:91648009-91648028 MsG0480023955.01.T01:intron 35.0%
!! AGCAGTATTTTTGATCTAGC+AGG + Chr4:91653127-91653146 MsG0480023955.01.T01:intron 35.0%
!! ATATAGTTGGTGTTGTTGGA+TGG + Chr4:91651052-91651071 MsG0480023955.01.T01:CDS 35.0%
!! ATATCCACTTTTGCAGTGAT+AGG - Chr4:91653359-91653378 None:intergenic 35.0%
!! GTAATGGATTAGTATGGGTT+GGG + Chr4:91649454-91649473 MsG0480023955.01.T01:intron 35.0%
!! TAATGGATTAGTATGGGTTG+GGG + Chr4:91649455-91649474 MsG0480023955.01.T01:intron 35.0%
!! TACTTTTGGAAGCTTACACA+TGG + Chr4:91651766-91651785 MsG0480023955.01.T01:CDS 35.0%
!! TATAGTTGGTGTTGTTGGAT+GGG + Chr4:91651053-91651072 MsG0480023955.01.T01:CDS 35.0%
!! TGTAATGGATTAGTATGGGT+TGG + Chr4:91649453-91649472 MsG0480023955.01.T01:intron 35.0%
!!! ACGTACAAGGTTTTGAATTG+TGG + Chr4:91651345-91651364 MsG0480023955.01.T01:intron 35.0%
!!! GTTTGTTTTGATGCTTAGAG+TGG + Chr4:91652185-91652204 MsG0480023955.01.T01:intron 35.0%
!!! TCCTTCCATTTTGAGTTAGA+TGG + Chr4:91652209-91652228 MsG0480023955.01.T01:intron 35.0%
AAAAGTTCGACACTGCAATC+TGG - Chr4:91651474-91651493 None:intergenic 40.0%
AAAGATGTTGACGATGCTGA+TGG - Chr4:91651649-91651668 None:intergenic 40.0%
AACAACAGTTGAAGTTGCGT+CGG - Chr4:91651294-91651313 None:intergenic 40.0%
AACCAAACACAGTGAGATAG+AGG - Chr4:91649965-91649984 None:intergenic 40.0%
AACGAAGTTGTTGGAATCTG+TGG + Chr4:91650736-91650755 MsG0480023955.01.T01:intron 40.0%
ACATGAAGGTAAAACCAAGC+AGG - Chr4:91651012-91651031 None:intergenic 40.0%
ACCAAACACAGTGAGATAGA+GGG - Chr4:91649964-91649983 None:intergenic 40.0%
ACGAAGTTGTTGGAATCTGT+GGG + Chr4:91650737-91650756 MsG0480023955.01.T01:intron 40.0%
AGAAGGAACCGATAATATGG+TGG + Chr4:91652385-91652404 MsG0480023955.01.T01:intron 40.0%
AGTGTTCCACCATTGTTTGA+TGG + Chr4:91653674-91653693 MsG0480023955.01.T01:three_prime_UTR 40.0%
ATCTACTACCATGTCGTCTT+TGG - Chr4:91649494-91649513 None:intergenic 40.0%
ATTGTTGAATGCAGTGAGCT+TGG + Chr4:91650924-91650943 MsG0480023955.01.T01:CDS 40.0%
CAACTATATAGGCAGCTGAT+TGG - Chr4:91651041-91651060 None:intergenic 40.0%
CAATCAGCTGCCTATATAGT+TGG + Chr4:91651039-91651058 MsG0480023955.01.T01:CDS 40.0%
CACAAATGTTAGAGGGACAA+TGG + Chr4:91653301-91653320 MsG0480023955.01.T01:three_prime_UTR 40.0%
CACATGGATCATTGTGATCA+AGG + Chr4:91651782-91651801 MsG0480023955.01.T01:CDS 40.0%
CATGAAGGTAAAACCAAGCA+GGG - Chr4:91651011-91651030 None:intergenic 40.0%
CATGGATCATTGTGATCAAG+GGG + Chr4:91651784-91651803 MsG0480023955.01.T01:CDS 40.0%
CATGTTATACCACATAGCAG+CGG - Chr4:91648535-91648554 None:intergenic 40.0%
CGCAATGAACTATATGTCTC+TGG + Chr4:91650836-91650855 MsG0480023955.01.T01:intron 40.0%
CTGATTGGCATGTAACATGA+AGG - Chr4:91651026-91651045 None:intergenic 40.0%
GATGGCCTAATAGTTGGATT+AGG - Chr4:91653611-91653630 None:intergenic 40.0%
GGTTCTATATTGGGCAAAAG+AGG + Chr4:91653490-91653509 MsG0480023955.01.T01:three_prime_UTR 40.0%
GTGGGTAGGAATTAAGCTAA+AGG + Chr4:91649122-91649141 MsG0480023955.01.T01:intron 40.0%
TACTGGAACCTTTACCATTG+GGG + Chr4:91651603-91651622 MsG0480023955.01.T01:CDS 40.0%
TAGACACTTGCATGAACAAG+AGG - Chr4:91648365-91648384 None:intergenic 40.0%
TAGACTCATCTAGATGCATG+TGG - Chr4:91647983-91648002 None:intergenic 40.0%
TAGAGCCATTGCATACTTGT+TGG + Chr4:91648001-91648020 MsG0480023955.01.T01:intron 40.0%
TAGAGGGACAATGGGATATT+TGG + Chr4:91653310-91653329 MsG0480023955.01.T01:three_prime_UTR 40.0%
TATGGAACTGATCTTGGATC+AGG + Chr4:91648968-91648987 MsG0480023955.01.T01:intron 40.0%
TATTAGGCCATCTGTTGCAA+AGG + Chr4:91653619-91653638 MsG0480023955.01.T01:three_prime_UTR 40.0%
TATTCCTTCTATGAGATGCC+TGG + Chr4:91652453-91652472 MsG0480023955.01.T01:intron 40.0%
TCAAACTCTAAATGTGAGCG+TGG + Chr4:91650449-91650468 MsG0480023955.01.T01:intron 40.0%
TCAAACTTGAAATGTGGCCA+TGG + Chr4:91650591-91650610 MsG0480023955.01.T01:intron 40.0%
TCTGACTATGGAACTGATCT+TGG + Chr4:91648962-91648981 MsG0480023955.01.T01:intron 40.0%
TCTGTCTTTCATTAGCAGCT+TGG - Chr4:91653270-91653289 None:intergenic 40.0%
TGTGCCCTAATCCAACTATT+AGG + Chr4:91653603-91653622 MsG0480023955.01.T01:three_prime_UTR 40.0%
TGTTAAAGCCAAAGACGACA+TGG + Chr4:91649483-91649502 MsG0480023955.01.T01:intron 40.0%
TTGTTGAATGCAGTGAGCTT+GGG + Chr4:91650925-91650944 MsG0480023955.01.T01:CDS 40.0%
! AGAAATAGGGTGTTACAGTG+TGG + Chr4:91648644-91648663 MsG0480023955.01.T01:intron 40.0%
! ATCCCAGTGCTTCATTTTAC+TGG - Chr4:91649610-91649629 None:intergenic 40.0%
! ATTTTGTGAAATGGGTGGGT+AGG + Chr4:91649108-91649127 MsG0480023955.01.T01:intron 40.0%
! CAAGTTGAAGATGGAACAGA+AGG + Chr4:91653440-91653459 MsG0480023955.01.T01:three_prime_UTR 40.0%
! CAGTGCTTCATTTTACTGGA+GGG - Chr4:91649606-91649625 None:intergenic 40.0%
! CTCCAGTAAAATGAAGCACT+GGG + Chr4:91649605-91649624 MsG0480023955.01.T01:intron 40.0%
! TGTGATTGCAAGGTACTTGA+AGG + Chr4:91650969-91650988 MsG0480023955.01.T01:CDS 40.0%
! TTAGAATTTGAGGCAGTGGA+GGG + Chr4:91650318-91650337 MsG0480023955.01.T01:intron 40.0%
! TTTAGAATTTGAGGCAGTGG+AGG + Chr4:91650317-91650336 MsG0480023955.01.T01:intron 40.0%
!! AAGAGTACCTTTGATGATGG+TGG - Chr4:91651911-91651930 None:intergenic 40.0%
!! AGTAAAATGAAGCACTGGGA+TGG + Chr4:91649609-91649628 MsG0480023955.01.T01:intron 40.0%
!! ATAGTTGGTGTTGTTGGATG+GGG + Chr4:91651054-91651073 MsG0480023955.01.T01:CDS 40.0%
!! CTGAAGAGTACCTTTGATGA+TGG - Chr4:91651914-91651933 None:intergenic 40.0%
!! GAGTTGCATCAAGTTGAAGA+TGG + Chr4:91653431-91653450 MsG0480023955.01.T01:three_prime_UTR 40.0%
!! GCCTATATAGTTGGTGTTGT+TGG + Chr4:91651048-91651067 MsG0480023955.01.T01:CDS 40.0%
!! GGAACAAATGGTGATGGATA+TGG + Chr4:91651840-91651859 MsG0480023955.01.T01:CDS 40.0%
!!! AAGGTTTTGAATTGTGGCTG+TGG + Chr4:91651351-91651370 MsG0480023955.01.T01:intron 40.0%
AACCTTTACCATTGGGGTGT+CGG + Chr4:91651609-91651628 MsG0480023955.01.T01:CDS 45.0%
AATGCCAGGCATCTCATAGA+AGG - Chr4:91652460-91652479 None:intergenic 45.0%
ACCCAATGCTGCAATAATGC+CGG - Chr4:91651736-91651755 None:intergenic 45.0%
ACCGGCATTATTGCAGCATT+GGG + Chr4:91651732-91651751 MsG0480023955.01.T01:CDS 45.0%
ACTATGGCCACCATCATCAA+AGG + Chr4:91651901-91651920 MsG0480023955.01.T01:CDS 45.0%
ACTCTAAATGTGAGCGTGGT+TGG + Chr4:91650453-91650472 MsG0480023955.01.T01:intron 45.0%
AGATCCTCGTTAATGGCAAC+AGG - Chr4:91652504-91652523 None:intergenic 45.0%
CCTCCAGTAAAATGAAGCAC+TGG + Chr4:91649604-91649623 MsG0480023955.01.T01:intron 45.0%
CGCTATAGTCAACGGCAATA+TGG - Chr4:91647906-91647925 None:intergenic 45.0%
GAATGACTATGGTTGGACTG+TGG + Chr4:91653576-91653595 MsG0480023955.01.T01:three_prime_UTR 45.0%
GCAACAGATGGCCTAATAGT+TGG - Chr4:91653617-91653636 None:intergenic 45.0%
GTGCTTCTGATGAGGAAGAA+AGG + Chr4:91652298-91652317 MsG0480023955.01.T01:intron 45.0%
GTTGAAGATGGAACAGAAGG+TGG + Chr4:91653443-91653462 MsG0480023955.01.T01:three_prime_UTR 45.0%
TAACACTTCAAACATGCCCG+TGG + Chr4:91651984-91652003 MsG0480023955.01.T01:intron 45.0%
TCACTGTCGAGAAAGATGCT+CGG - Chr4:91652928-91652947 None:intergenic 45.0%
TCCCTCTATCTCACTGTGTT+TGG + Chr4:91649960-91649979 MsG0480023955.01.T01:intron 45.0%
TCGATCGTATGTTGTTGGTC+TGG + Chr4:91648673-91648692 MsG0480023955.01.T01:intron 45.0%
TCTGGTCGATCGTATGTTGT+TGG + Chr4:91648668-91648687 MsG0480023955.01.T01:intron 45.0%
TGCAACACCTTTGCAACAGA+TGG - Chr4:91653629-91653648 None:intergenic 45.0%
TGCACCTATCACTGCAAAAG+TGG + Chr4:91653352-91653371 MsG0480023955.01.T01:three_prime_UTR 45.0%
TGGGATATTTGGCACCTGAA+TGG + Chr4:91653321-91653340 MsG0480023955.01.T01:three_prime_UTR 45.0%
TGTGGTACCAATTCTCCTCA+AGG - Chr4:91647965-91647984 None:intergenic 45.0%
TGTTGAATGCAGTGAGCTTG+GGG + Chr4:91650926-91650945 MsG0480023955.01.T01:CDS 45.0%
TTACCACCTACCTTTCCGTA+TGG + Chr4:91648280-91648299 MsG0480023955.01.T01:intron 45.0%
TTGGGGATCTTGATGCCTTT+GGG + Chr4:91650943-91650962 MsG0480023955.01.T01:CDS 45.0%
! AACTGGAAGCATGCATACAC+CGG + Chr4:91651714-91651733 MsG0480023955.01.T01:CDS 45.0%
! CCAGTGCTTCATTTTACTGG+AGG - Chr4:91649607-91649626 None:intergenic 45.0%
! CTAGATTAGGGCTCTGATCT+AGG + Chr4:91648382-91648401 MsG0480023955.01.T01:intron 45.0%
! CTTTAAAGGGTTTGAGGCCT+TGG + Chr4:91651665-91651684 MsG0480023955.01.T01:CDS 45.0%
! GATAAAGAGGTGTGACAGCA+AGG - Chr4:91652761-91652780 None:intergenic 45.0%
! GATACTCACTTGATTCGACC+TGG + Chr4:91648794-91648813 MsG0480023955.01.T01:intron 45.0%
! TAGAATTTGAGGCAGTGGAG+GGG + Chr4:91650319-91650338 MsG0480023955.01.T01:intron 45.0%
!! GGTGCATTTTTGAGCCATTC+AGG - Chr4:91653338-91653357 None:intergenic 45.0%
!! GTCGTCTTTGGCTTTAACAC+TGG - Chr4:91649482-91649501 None:intergenic 45.0%
!! TGCAAAGGTGTTGCAGATGT+CGG + Chr4:91653634-91653653 MsG0480023955.01.T01:three_prime_UTR 45.0%
AAGCTGGGAAGTGACTTAGC+TGG + Chr4:91651087-91651106 MsG0480023955.01.T01:CDS 50.0%
ACAAGAGGAACTCCACTCCT+CGG - Chr4:91648350-91648369 None:intergenic 50.0%
ACCTACCTTTCCGTATGGAC+GGG + Chr4:91648285-91648304 MsG0480023955.01.T01:intron 50.0%
ACTCCATCTACCCGTCCATA+CGG - Chr4:91648298-91648317 None:intergenic 50.0%
ACTGCCTGTTGCCATTAACG+AGG + Chr4:91652497-91652516 MsG0480023955.01.T01:intron 50.0%
AGGTAGGTGGTAAACCACTG+AGG - Chr4:91648273-91648292 None:intergenic 50.0%
ATCCGACACCCCAATGGTAA+AGG - Chr4:91651614-91651633 None:intergenic 50.0%
ATCTACCCGTCCATACGGAA+AGG - Chr4:91648293-91648312 None:intergenic 50.0%
CACCGGCATTATTGCAGCAT+TGG + Chr4:91651731-91651750 MsG0480023955.01.T01:CDS 50.0%
CACCTACCTTTCCGTATGGA+CGG + Chr4:91648284-91648303 MsG0480023955.01.T01:intron 50.0%
CTTCAGACTCTCCTATCAGC+TGG + Chr4:91651928-91651947 MsG0480023955.01.T01:CDS 50.0%
CTTGCAATCACAGCTCCCAA+AGG - Chr4:91650961-91650980 None:intergenic 50.0%
CTTGGGGATCTTGATGCCTT+TGG + Chr4:91650942-91650961 MsG0480023955.01.T01:CDS 50.0%
GACAGGTTTCTTTCCGCTTC+AGG + Chr4:91650195-91650214 MsG0480023955.01.T01:intron 50.0%
GAGTGATGTTCACCACCTCA+AGG + Chr4:91650759-91650778 MsG0480023955.01.T01:intron 50.0%
GATGTAACGCTAACCCTCAG+TGG + Chr4:91648256-91648275 MsG0480023955.01.T01:intron 50.0%
GGTAGGTGGTAAACCACTGA+GGG - Chr4:91648272-91648291 None:intergenic 50.0%
GTCATACCTGAAGGGTTCCA+AGG - Chr4:91651158-91651177 None:intergenic 50.0%
GTGACGACCTTGAGGAGAAT+TGG + Chr4:91647955-91647974 MsG0480023955.01.T01:CDS 50.0%
TCAAAACAGCAGACCCTGCT+TGG + Chr4:91650995-91651014 MsG0480023955.01.T01:CDS 50.0%
TCGTTAATGGCAACAGGCAG+TGG - Chr4:91652498-91652517 None:intergenic 50.0%
TCTCAACCTCACCAGCTGAT+AGG - Chr4:91651942-91651961 None:intergenic 50.0%
TTAATGGCAACAGGCAGTGG+CGG - Chr4:91652495-91652514 None:intergenic 50.0%
TTTCCGTATGGACGGGTAGA+TGG + Chr4:91648292-91648311 MsG0480023955.01.T01:intron 50.0%
! CTTTGGGAGCTGTGATTGCA+AGG + Chr4:91650959-91650978 MsG0480023955.01.T01:CDS 50.0%
! GGCATTATTGCAGCATTGGG+TGG + Chr4:91651735-91651754 MsG0480023955.01.T01:CDS 50.0%
! GGCATTTGGCTCATAATGCC+AGG - Chr4:91652474-91652493 None:intergenic 50.0%
! GGGTGGCATTGCTGTACTTT+TGG + Chr4:91651752-91651771 MsG0480023955.01.T01:CDS 50.0%
! GTTGTTGCTAGTTGATGCCG+AGG + Chr4:91648330-91648349 MsG0480023955.01.T01:intron 50.0%
! TAAAGGGTTTGAGGCCTTGG+AGG + Chr4:91651668-91651687 MsG0480023955.01.T01:CDS 50.0%
!! AAGGTGTTGCAGATGTCGGA+AGG + Chr4:91653638-91653657 MsG0480023955.01.T01:three_prime_UTR 50.0%
ACCCGTCCATACGGAAAGGT+AGG - Chr4:91648289-91648308 None:intergenic 55.0%
CAGCGGATCGCTACGATAAC+TGG + Chr4:91651697-91651716 MsG0480023955.01.T01:CDS 55.0%
CATCATGGGTGACGACCTTG+AGG + Chr4:91647947-91647966 MsG0480023955.01.T01:CDS 55.0%
CGTCCATACGGAAAGGTAGG+TGG - Chr4:91648286-91648305 None:intergenic 55.0%
CTTCTGCCTTGGAACCCTTC+AGG + Chr4:91651149-91651168 MsG0480023955.01.T01:CDS 55.0%
GAAGGGTTCCAAGGCAGAAG+AGG - Chr4:91651149-91651168 None:intergenic 55.0%
GACTCTCCTATCAGCTGGTG+AGG + Chr4:91651933-91651952 MsG0480023955.01.T01:intron 55.0%
GGGATCATCCTCTTCTGCCT+TGG + Chr4:91651138-91651157 MsG0480023955.01.T01:CDS 55.0%
GTCACTTCCCAGCTTGACAC+TGG - Chr4:91651082-91651101 None:intergenic 55.0%
TGAAGCTTCACGAGCAGCCA+CGG - Chr4:91652004-91652023 None:intergenic 55.0%
TTGCGTATCCGACACCCCAA+TGG - Chr4:91651620-91651639 None:intergenic 55.0%
! AGGGTGTTACAGTGTGGCTC+TGG + Chr4:91648650-91648669 MsG0480023955.01.T01:intron 55.0%
! ATGGGGTACCAGTGTCAAGC+TGG + Chr4:91651071-91651090 MsG0480023955.01.T01:CDS 55.0%
! CGAGAAAGATGCTCGGTGAG+TGG - Chr4:91652921-91652940 None:intergenic 55.0%
! TGCTAGTTGATGCCGAGGAG+TGG + Chr4:91648335-91648354 MsG0480023955.01.T01:intron 55.0%
! TGGGGTACCAGTGTCAAGCT+GGG + Chr4:91651072-91651091 MsG0480023955.01.T01:CDS 55.0%
ATCCGCTGCAGACACCTCCA+AGG - Chr4:91651685-91651704 None:intergenic 60.0%
CAACAGGCAGTGGCGGCATT+TGG - Chr4:91652488-91652507 None:intergenic 60.0%
GAAGCTTCACGAGCAGCCAC+GGG - Chr4:91652003-91652022 None:intergenic 60.0%
TGGACGGGTAGATGGAGTGC+AGG + Chr4:91648300-91648319 MsG0480023955.01.T01:intron 60.0%
! GATGCTCGGTGAGTGGTGAC+AGG - Chr4:91652914-91652933 None:intergenic 60.0%
CAGGCTCGACTGTCCCTGGT+AGG + Chr4:91648987-91649006 MsG0480023955.01.T01:intron 65.0%
GGATCAGGCTCGACTGTCCC+TGG + Chr4:91648983-91649002 MsG0480023955.01.T01:intron 65.0%
!! GGCCTTGGAGGTGTCTGCAG+CGG + Chr4:91651680-91651699 MsG0480023955.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 91647895 91653709 91647895 ID=MsG0480023955.01;Name=MsG0480023955.01
Chr4 mRNA 91647895 91653709 91647895 ID=MsG0480023955.01.T01;Parent=MsG0480023955.01;Name=MsG0480023955.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|0.4|1|1|5|420|315
Chr4 exon 91647895 91647976 91647895 ID=MsG0480023955.01.T01:exon:12685;Parent=MsG0480023955.01.T01
Chr4 exon 91650322 91650415 91650322 ID=MsG0480023955.01.T01:exon:12686;Parent=MsG0480023955.01.T01
Chr4 exon 91650897 91651170 91650897 ID=MsG0480023955.01.T01:exon:12687;Parent=MsG0480023955.01.T01
Chr4 exon 91651453 91651949 91651453 ID=MsG0480023955.01.T01:exon:12688;Parent=MsG0480023955.01.T01
Chr4 exon 91653289 91653709 91653289 ID=MsG0480023955.01.T01:exon:12689;Parent=MsG0480023955.01.T01
Chr4 CDS 91647895 91647976 91647895 ID=MsG0480023955.01.T01:cds;Parent=MsG0480023955.01.T01
Chr4 CDS 91650322 91650415 91650322 ID=MsG0480023955.01.T01:cds;Parent=MsG0480023955.01.T01
Chr4 CDS 91650897 91651170 91650897 ID=MsG0480023955.01.T01:cds;Parent=MsG0480023955.01.T01
Chr4 CDS 91651453 91651949 91651453 ID=MsG0480023955.01.T01:cds;Parent=MsG0480023955.01.T01
Chr4 CDS 91653289 91653289 91653289 ID=MsG0480023955.01.T01:cds;Parent=MsG0480023955.01.T01
Chr4 three_prime_UTR 91653290 91653709 91653290 ID=MsG0480023955.01.T01:three_prime_utr;Parent=MsG0480023955.01.T01
Gene Sequence

>MsG0480023955.01.T01

ATGTTATACCATATTGCCGTTGACTATAGCGTTGATAATGATGTTTTTGTTGCATCATGGGTGACGACCTTGAGGAGAATTGAATTTGAGGCAGTGGAGGGGAACCTCAAATCTTGTGCAAATGAGAAGGAGAAATTTGAGAAGCAGATTTTGTTTGAAAAAGTTTACACAGTCAAGATGTTAATTGTTTTTCTGACTCATGGATTGTTGAATGCAGTGAGCTTGGGGATCTTGATGCCTTTGGGAGCTGTGATTGCAAGGTACTTGAAGGTGTTCAAAACAGCAGACCCTGCTTGGTTTTACCTTCATGTTACATGCCAATCAGCTGCCTATATAGTTGGTGTTGTTGGATGGGGTACCAGTGTCAAGCTGGGAAGTGACTTAGCTGGTGTTACATATTCAACTCATAGAACACTCGGGATCATCCTCTTCTGCCTTGGAACCCTTCAGAAAGCAATGATGCTGCAACCAGATTGCAGTGTCGAACTTTTTTTTGATAATGTGACTAATGCCTCTTTTGAATGCTATGTTATGCTACTAATAATTGAAATGAAATTATCAGAAATTTCTGCTACTGAATACAGGTTTTTGCTCTGTTATTACTGGAACCTTTACCATTGGGGTGTCGGATACGCAACTATAACCATCAGCATCGTCAACATCTTTAAAGGGTTTGAGGCCTTGGAGGTGTCTGCAGCGGATCGCTACGATAACTGGAAGCATGCATACACCGGCATTATTGCAGCATTGGGTGGCATTGCTGTACTTTTGGAAGCTTACACATGGATCATTGTGATCAAGGGGAAGAAATCAGAGAACAAGTTGCAAGGAATGAATGGAACAAATGGTGATGGATATGGTTTCTATAATCCGATCAAACCTTCTTTAACTAGCTATCACTATGGCCACCATCATCAAAGGTACTCTTCAGACTCTCCTATCAGCTGA
Protein sequence

>MsG0480023955.01.T01

MLYHIAVDYSVDNDVFVASWVTTLRRIEFEAVEGNLKSCANEKEKFEKQILFEKVYTVKMLIVFLTHGLLNAVSLGILMPLGAVIARYLKVFKTADPAWFYLHVTCQSAAYIVGVVGWGTSVKLGSDLAGVTYSTHRTLGIILFCLGTLQKAMMLQPDCSVELFFDNVTNASFECYVMLLIIEMKLSEISATEYRFLLCYYWNLYHWGVGYATITISIVNIFKGFEALEVSAADRYDNWKHAYTGIIAALGGIAVLLEAYTWIIVIKGKKSENKLQGMNGTNGDGYGFYNPIKPSLTSYHYGHHHQRYSSDSPIS*