Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024402.01.T01 | XP_039685898.1 | 90.991 | 111 | 10 | 0 | 25 | 135 | 379 | 489 | 4.12E-68 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024402.01.T01 | Q39202 | 37.383 | 107 | 58 | 1 | 25 | 131 | 712 | 809 | 5.49E-19 | 85.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024402.01.T01 | A0A072W0U2 | 90.991 | 111 | 10 | 0 | 25 | 135 | 564 | 674 | 1.08e-66 | 223 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0580024402.01 | 0.800659 | 1.299458e-48 | 6.084706e-46 |
| MsG0180000470.01 | MsG0580024402.01 | 0.813243 | 2.824255e-51 | 1.834485e-48 |
| MsG0180002842.01 | MsG0580024402.01 | 0.801226 | 9.951264e-49 | 4.726998e-46 |
| MsG0180004264.01 | MsG0580024402.01 | 0.803183 | 3.937506e-49 | 1.965749e-46 |
| MsG0180004426.01 | MsG0580024402.01 | 0.834608 | 2.716139e-56 | 3.239803e-53 |
| MsG0280010698.01 | MsG0580024402.01 | 0.800763 | 1.237149e-48 | 5.808113e-46 |
| MsG0380011494.01 | MsG0580024402.01 | 0.816328 | 5.850963e-52 | 4.133765e-49 |
| MsG0380014139.01 | MsG0580024402.01 | 0.821295 | 4.356543e-53 | 3.530164e-50 |
| MsG0480021536.01 | MsG0580024402.01 | 0.809358 | 1.968760e-50 | 1.153510e-47 |
| MsG0480021558.01 | MsG0580024402.01 | 0.803539 | 3.322310e-49 | 1.673963e-46 |
| MsG0480023248.01 | MsG0580024402.01 | 0.808593 | 2.870442e-50 | 1.647839e-47 |
| MsG0480023955.01 | MsG0580024402.01 | 0.834781 | 2.457373e-56 | 2.945977e-53 |
| MsG0580024402.01 | MsG0780039252.01 | 0.813326 | 2.708234e-51 | 1.763230e-48 |
| MsG0580024402.01 | MsG0780040576.01 | -0.800025 | 1.748896e-48 | 8.058341e-46 |
| MsG0580024402.01 | MsG0780041456.01 | 0.811260 | 7.653408e-51 | 4.715251e-48 |
| MsG0580024402.01 | MsG0880045895.01 | 0.829381 | 5.314543e-55 | 5.430730e-52 |
| MsG0380016910.01 | MsG0580024402.01 | 0.804932 | 1.703638e-49 | 8.897279e-47 |
| MsG0280010443.01 | MsG0580024402.01 | 0.800421 | 1.452798e-48 | 6.761988e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024402.01.T01 | MTR_1g104555 | 90.991 | 111 | 10 | 0 | 25 | 135 | 564 | 674 | 2.75e-70 | 223 |
| MsG0580024402.01.T01 | MTR_5g006160 | 55.963 | 109 | 38 | 2 | 25 | 133 | 672 | 770 | 3.83e-34 | 125 |
| MsG0580024402.01.T01 | MTR_2g067970 | 43.925 | 107 | 55 | 3 | 25 | 131 | 785 | 886 | 9.16e-24 | 95.9 |
| MsG0580024402.01.T01 | MTR_2g067990 | 43.925 | 107 | 55 | 2 | 25 | 131 | 897 | 998 | 3.18e-22 | 91.7 |
| MsG0580024402.01.T01 | MTR_2g067980 | 43.925 | 107 | 55 | 2 | 25 | 131 | 921 | 1022 | 5.59e-22 | 90.9 |
| MsG0580024402.01.T01 | MTR_2g068650 | 42.991 | 107 | 56 | 2 | 25 | 131 | 635 | 736 | 1.20e-21 | 90.1 |
| MsG0580024402.01.T01 | MTR_5g013070 | 40.187 | 107 | 60 | 2 | 25 | 131 | 692 | 794 | 2.91e-21 | 89.0 |
| MsG0580024402.01.T01 | MTR_5g013130 | 39.252 | 107 | 61 | 2 | 25 | 131 | 689 | 791 | 5.32e-20 | 85.1 |
| MsG0580024402.01.T01 | MTR_8g011370 | 40.187 | 107 | 60 | 1 | 25 | 131 | 702 | 804 | 3.11e-19 | 83.2 |
| MsG0580024402.01.T01 | MTR_8g011410 | 37.190 | 121 | 65 | 3 | 13 | 127 | 687 | 802 | 8.79e-17 | 75.9 |
| MsG0580024402.01.T01 | MTR_4g114280 | 36.792 | 106 | 62 | 2 | 26 | 131 | 734 | 834 | 1.51e-16 | 75.5 |
| MsG0580024402.01.T01 | MTR_4g114240 | 39.623 | 106 | 59 | 2 | 26 | 131 | 720 | 820 | 1.04e-15 | 72.8 |
| MsG0580024402.01.T01 | MTR_4g114270 | 32.110 | 109 | 66 | 3 | 26 | 134 | 706 | 806 | 7.44e-15 | 70.5 |
| MsG0580024402.01.T01 | MTR_8g067720 | 34.746 | 118 | 66 | 4 | 17 | 132 | 511 | 619 | 1.96e-14 | 69.3 |
| MsG0580024402.01.T01 | MTR_8g011440 | 33.871 | 124 | 71 | 3 | 13 | 130 | 699 | 817 | 3.10e-14 | 68.9 |
| MsG0580024402.01.T01 | MTR_8g067630 | 34.746 | 118 | 66 | 4 | 17 | 132 | 460 | 568 | 7.36e-14 | 67.8 |
| MsG0580024402.01.T01 | MTR_4g114250 | 31.132 | 106 | 65 | 3 | 26 | 131 | 708 | 805 | 1.83e-13 | 66.6 |
| MsG0580024402.01.T01 | MTR_3g107070 | 32.000 | 125 | 72 | 3 | 13 | 131 | 636 | 753 | 3.45e-13 | 65.9 |
| MsG0580024402.01.T01 | MTR_7g116130 | 31.731 | 104 | 65 | 1 | 17 | 120 | 528 | 625 | 3.47e-13 | 65.9 |
| MsG0580024402.01.T01 | MTR_6g083780 | 35.514 | 107 | 60 | 3 | 26 | 131 | 537 | 635 | 4.72e-13 | 65.5 |
| MsG0580024402.01.T01 | MTR_1g028020 | 33.645 | 107 | 63 | 3 | 26 | 131 | 331 | 430 | 6.48e-13 | 65.1 |
| MsG0580024402.01.T01 | MTR_8g067930 | 35.514 | 107 | 58 | 4 | 28 | 132 | 523 | 620 | 6.49e-13 | 65.1 |
| MsG0580024402.01.T01 | MTR_1g027320 | 33.654 | 104 | 55 | 3 | 26 | 126 | 186 | 278 | 4.06e-12 | 62.4 |
| MsG0580024402.01.T01 | MTR_4g113710 | 35.345 | 116 | 57 | 5 | 26 | 131 | 289 | 396 | 4.15e-12 | 62.4 |
| MsG0580024402.01.T01 | MTR_2g008390 | 31.481 | 108 | 70 | 1 | 17 | 124 | 468 | 571 | 5.89e-12 | 62.0 |
| MsG0580024402.01.T01 | MTR_7g082280 | 33.898 | 118 | 64 | 6 | 26 | 137 | 611 | 720 | 5.97e-12 | 62.0 |
| MsG0580024402.01.T01 | MTR_1g097160 | 32.407 | 108 | 69 | 1 | 17 | 124 | 478 | 581 | 6.96e-12 | 62.0 |
| MsG0580024402.01.T01 | MTR_7g082300 | 34.259 | 108 | 61 | 5 | 26 | 131 | 734 | 833 | 7.73e-12 | 62.0 |
| MsG0580024402.01.T01 | MTR_5g033820 | 29.630 | 108 | 71 | 1 | 17 | 124 | 476 | 578 | 7.81e-12 | 61.6 |
| MsG0580024402.01.T01 | MTR_2g008370 | 34.343 | 99 | 60 | 1 | 26 | 124 | 472 | 565 | 7.95e-12 | 61.6 |
| MsG0580024402.01.T01 | MTR_8g068050 | 35.238 | 105 | 60 | 2 | 28 | 132 | 538 | 634 | 8.45e-12 | 61.6 |
| MsG0580024402.01.T01 | MTR_8g068050 | 35.238 | 105 | 60 | 2 | 28 | 132 | 428 | 524 | 1.01e-11 | 61.6 |
| MsG0580024402.01.T01 | MTR_1g028100 | 32.710 | 107 | 64 | 3 | 26 | 131 | 273 | 372 | 1.05e-11 | 61.2 |
| MsG0580024402.01.T01 | MTR_1g028170 | 32.710 | 107 | 64 | 3 | 26 | 131 | 300 | 399 | 1.06e-11 | 61.2 |
| MsG0580024402.01.T01 | MTR_7g085860 | 33.945 | 109 | 59 | 5 | 26 | 131 | 349 | 447 | 1.22e-11 | 61.2 |
| MsG0580024402.01.T01 | MTR_2g008360 | 31.481 | 108 | 70 | 1 | 17 | 124 | 467 | 570 | 1.72e-11 | 60.8 |
| MsG0580024402.01.T01 | MTR_5g077100 | 33.962 | 106 | 69 | 1 | 26 | 131 | 549 | 653 | 1.93e-11 | 60.8 |
| MsG0580024402.01.T01 | MTR_7g082110 | 32.743 | 113 | 58 | 6 | 25 | 131 | 719 | 819 | 2.03e-11 | 60.5 |
| MsG0580024402.01.T01 | MTR_8g088760 | 34.259 | 108 | 63 | 3 | 26 | 130 | 471 | 573 | 2.07e-11 | 60.5 |
| MsG0580024402.01.T01 | MTR_1g029610 | 31.132 | 106 | 66 | 1 | 26 | 131 | 474 | 572 | 2.10e-11 | 60.5 |
| MsG0580024402.01.T01 | MTR_7g018200 | 31.481 | 108 | 69 | 1 | 17 | 124 | 476 | 578 | 2.13e-11 | 60.5 |
| MsG0580024402.01.T01 | MTR_2g036460 | 31.008 | 129 | 76 | 4 | 10 | 132 | 304 | 425 | 2.57e-11 | 60.1 |
| MsG0580024402.01.T01 | MTR_2g054870 | 33.043 | 115 | 74 | 2 | 20 | 131 | 284 | 398 | 2.88e-11 | 60.1 |
| MsG0580024402.01.T01 | MTR_7g115740 | 31.897 | 116 | 71 | 4 | 17 | 132 | 531 | 638 | 9.70e-11 | 58.5 |
| MsG0580024402.01.T01 | MTR_7g082400 | 33.945 | 109 | 61 | 5 | 26 | 131 | 268 | 368 | 9.87e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024402.01.T01 | AT1G70250 | 29.907 | 107 | 71 | 2 | 26 | 131 | 642 | 745 | 2.02e-13 | 66.6 |
| MsG0580024402.01.T01 | AT1G60800 | 29.630 | 108 | 71 | 1 | 17 | 124 | 408 | 510 | 3.84e-13 | 65.5 |
| MsG0580024402.01.T01 | AT1G60800 | 29.630 | 108 | 71 | 1 | 17 | 124 | 475 | 577 | 4.92e-13 | 65.5 |
| MsG0580024402.01.T01 | AT1G71830 | 32.407 | 108 | 69 | 1 | 17 | 124 | 476 | 579 | 1.49e-12 | 63.9 |
| MsG0580024402.01.T01 | AT1G34210 | 32.407 | 108 | 69 | 1 | 17 | 124 | 479 | 582 | 2.08e-12 | 63.5 |
| MsG0580024402.01.T01 | AT1G34210 | 32.407 | 108 | 69 | 1 | 17 | 124 | 479 | 582 | 2.08e-12 | 63.5 |
| MsG0580024402.01.T01 | AT4G33430 | 33.333 | 108 | 68 | 1 | 17 | 124 | 510 | 613 | 3.63e-12 | 62.8 |
| MsG0580024402.01.T01 | AT4G33430 | 33.333 | 108 | 68 | 1 | 17 | 124 | 463 | 566 | 3.80e-12 | 62.8 |
| MsG0580024402.01.T01 | AT5G03140 | 33.645 | 107 | 70 | 1 | 26 | 132 | 553 | 658 | 4.36e-12 | 62.8 |
| MsG0580024402.01.T01 | AT4G32300 | 32.031 | 128 | 69 | 5 | 13 | 131 | 656 | 774 | 7.39e-12 | 62.0 |
| MsG0580024402.01.T01 | AT1G29730 | 32.353 | 102 | 64 | 1 | 26 | 127 | 821 | 917 | 7.66e-12 | 62.0 |
| MsG0580024402.01.T01 | AT1G29730 | 32.353 | 102 | 64 | 1 | 26 | 127 | 853 | 949 | 7.68e-12 | 62.0 |
| MsG0580024402.01.T01 | AT1G66980 | 34.821 | 112 | 59 | 6 | 26 | 131 | 970 | 1073 | 1.61e-11 | 60.8 |
| MsG0580024402.01.T01 | AT1G66980 | 34.821 | 112 | 59 | 6 | 26 | 131 | 987 | 1090 | 1.61e-11 | 60.8 |
| MsG0580024402.01.T01 | AT1G66980 | 34.821 | 112 | 59 | 6 | 26 | 131 | 1014 | 1117 | 1.62e-11 | 60.8 |
| MsG0580024402.01.T01 | AT1G66980 | 34.821 | 112 | 59 | 6 | 26 | 131 | 1016 | 1119 | 1.62e-11 | 60.8 |
| MsG0580024402.01.T01 | AT4G18250 | 35.455 | 110 | 63 | 4 | 26 | 131 | 539 | 644 | 1.90e-11 | 60.8 |
| MsG0580024402.01.T01 | AT3G25560 | 32.407 | 108 | 68 | 1 | 17 | 124 | 482 | 584 | 1.94e-11 | 60.8 |
| MsG0580024402.01.T01 | AT3G25560 | 32.407 | 108 | 68 | 1 | 17 | 124 | 483 | 585 | 1.94e-11 | 60.8 |
| MsG0580024402.01.T01 | AT3G25560 | 32.407 | 108 | 68 | 1 | 17 | 124 | 482 | 584 | 1.94e-11 | 60.8 |
| MsG0580024402.01.T01 | AT1G67000 | 28.947 | 114 | 71 | 4 | 26 | 131 | 739 | 850 | 3.36e-11 | 60.1 |
| MsG0580024402.01.T01 | AT1G29740 | 33.684 | 95 | 58 | 1 | 26 | 120 | 857 | 946 | 5.40e-11 | 59.7 |
| MsG0580024402.01.T01 | AT1G29740 | 33.684 | 95 | 58 | 1 | 26 | 120 | 857 | 946 | 5.43e-11 | 59.7 |
| MsG0580024402.01.T01 | AT3G53380 | 33.962 | 106 | 70 | 0 | 26 | 131 | 556 | 661 | 6.64e-11 | 59.3 |
| MsG0580024402.01.T01 | AT5G38280 | 29.907 | 107 | 70 | 3 | 26 | 131 | 514 | 616 | 7.75e-11 | 58.9 |
| MsG0580024402.01.T01 | AT5G38280 | 29.907 | 107 | 70 | 3 | 26 | 131 | 514 | 616 | 7.76e-11 | 58.9 |
| MsG0580024402.01.T01 | AT1G53430 | 33.028 | 109 | 62 | 4 | 26 | 132 | 810 | 909 | 8.41e-11 | 58.9 |
| MsG0580024402.01.T01 | AT1G53430 | 33.028 | 109 | 62 | 4 | 26 | 132 | 851 | 950 | 8.44e-11 | 58.9 |
| MsG0580024402.01.T01 | AT4G02420 | 29.630 | 108 | 71 | 1 | 17 | 124 | 522 | 624 | 8.46e-11 | 58.9 |
Find 33 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGATTGGGTTCTATAT+TGG | 0.218702 | 5:+4346055 | MsG0580024402.01.T01:CDS |
| TAGAGGGACAATGGGATATT+TGG | 0.257183 | 5:+4345872 | MsG0580024402.01.T01:CDS |
| TATAGATTGGGTTCTATATT+GGG | 0.279264 | 5:+4346056 | MsG0580024402.01.T01:CDS |
| GATGGCCTAATAGTTGGATT+AGG | 0.320977 | 5:-4346183 | None:intergenic |
| TGCAACACCTTTGCAATAGA+TGG | 0.340385 | 5:-4346201 | None:intergenic |
| ATGACATGATACTTATAGAT+TGG | 0.369608 | 5:+4346043 | MsG0580024402.01.T01:CDS |
| AAGTCGTTAATGATTTCATT+AGG | 0.378871 | 5:+4346121 | MsG0580024402.01.T01:CDS |
| TGTGCCCTAATCCAACTATT+AGG | 0.379826 | 5:+4346178 | MsG0580024402.01.T01:CDS |
| AGTGTTCCACCATTGTTTGA+TGG | 0.394571 | 5:+4346249 | MsG0580024402.01.T01:CDS |
| GCAATAGATGGCCTAATAGT+TGG | 0.413635 | 5:-4346189 | None:intergenic |
| ATGGCCTAATAGTTGGATTA+GGG | 0.430405 | 5:-4346182 | None:intergenic |
| TAGGTTTGAGAGAATGACTA+TGG | 0.451333 | 5:+4346140 | MsG0580024402.01.T01:CDS |
| TGACATGATACTTATAGATT+GGG | 0.452945 | 5:+4346044 | MsG0580024402.01.T01:CDS |
| GGTTCTATATTGGGCAAAAG+AGG | 0.465154 | 5:+4346065 | MsG0580024402.01.T01:CDS |
| AGAACAAGCACAAATGTTAG+AGG | 0.472788 | 5:+4345855 | None:intergenic |
| GCAAAAGTGGATTGCAAAAG+TGG | 0.476992 | 5:+4345927 | MsG0580024402.01.T01:CDS |
| GAGTTGCATCAAGTTGAAGA+TGG | 0.493345 | 5:+4346006 | MsG0580024402.01.T01:CDS |
| TGCACCTATCACTGCAAAAG+TGG | 0.498118 | 5:+4345914 | MsG0580024402.01.T01:CDS |
| AAAGTGGATATCTACAGCTT+TGG | 0.498218 | 5:+4345943 | MsG0580024402.01.T01:CDS |
| ACAAATGTTAGAGGGACAAT+GGG | 0.506091 | 5:+4345864 | None:intergenic |
| TTTGAGAGAATGACTATGGT+TGG | 0.507037 | 5:+4346144 | MsG0580024402.01.T01:CDS |
| GTTCTATATTGGGCAAAAGA+GGG | 0.512150 | 5:+4346066 | MsG0580024402.01.T01:CDS |
| CACAAATGTTAGAGGGACAA+TGG | 0.540064 | 5:+4345863 | None:intergenic |
| TGCAAAGGTGTTGCAGATGT+CGG | 0.550893 | 5:+4346209 | MsG0580024402.01.T01:CDS |
| CATTAACGACTTCAACATCA+TGG | 0.554782 | 5:-4346110 | None:intergenic |
| CAAGTTGAAGATGGAACAGA+AGG | 0.575586 | 5:+4346015 | MsG0580024402.01.T01:CDS |
| TGGGATATTTGGCACCAGAA+TGG | 0.579107 | 5:+4345883 | MsG0580024402.01.T01:CDS |
| TTCTATATTGGGCAAAAGAG+GGG | 0.600711 | 5:+4346067 | MsG0580024402.01.T01:CDS |
| AAGGTGTTGCAGATGTCGGA+AGG | 0.614948 | 5:+4346213 | MsG0580024402.01.T01:CDS |
| TATTAGGCCATCTATTGCAA+AGG | 0.622506 | 5:+4346194 | MsG0580024402.01.T01:CDS |
| GAACAAGCACAAATGTTAGA+GGG | 0.627687 | 5:+4345856 | None:intergenic |
| GTTGAAGATGGAACAGAAGG+TGG | 0.634859 | 5:+4346018 | MsG0580024402.01.T01:CDS |
| GAATGACTATGGTTGGACTG+TGG | 0.741878 | 5:+4346151 | MsG0580024402.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTTTCCATCAAACAA+TGG | - | Chr5:4346261-4346280 | None:intergenic | 20.0% |
| !!! | TTGAAATCTTATTTTGTAGA+AGG | + | Chr5:4345977-4345996 | MsG0580024402.01.T01:CDS | 20.0% |
| ! | AAGTCGTTAATGATTTCATT+AGG | + | Chr5:4346121-4346140 | MsG0580024402.01.T01:CDS | 25.0% |
| ! | ATGACATGATACTTATAGAT+TGG | + | Chr5:4346043-4346062 | MsG0580024402.01.T01:CDS | 25.0% |
| ! | TATAGATTGGGTTCTATATT+GGG | + | Chr5:4346056-4346075 | MsG0580024402.01.T01:CDS | 25.0% |
| ! | TGACATGATACTTATAGATT+GGG | + | Chr5:4346044-4346063 | MsG0580024402.01.T01:CDS | 25.0% |
| ! | TTATAGATTGGGTTCTATAT+TGG | + | Chr5:4346055-4346074 | MsG0580024402.01.T01:CDS | 25.0% |
| ! | ATTTTTCCATCAAACAATGG+TGG | - | Chr5:4346258-4346277 | None:intergenic | 30.0% |
| AAAGTGGATATCTACAGCTT+TGG | + | Chr5:4345943-4345962 | MsG0580024402.01.T01:CDS | 35.0% | |
| ATGGCCTAATAGTTGGATTA+GGG | - | Chr5:4346185-4346204 | None:intergenic | 35.0% | |
| CATTAACGACTTCAACATCA+TGG | - | Chr5:4346113-4346132 | None:intergenic | 35.0% | |
| GTTCTATATTGGGCAAAAGA+GGG | + | Chr5:4346066-4346085 | MsG0580024402.01.T01:CDS | 35.0% | |
| TAGGTTTGAGAGAATGACTA+TGG | + | Chr5:4346140-4346159 | MsG0580024402.01.T01:CDS | 35.0% | |
| TATTAGGCCATCTATTGCAA+AGG | + | Chr5:4346194-4346213 | MsG0580024402.01.T01:CDS | 35.0% | |
| TTCTATATTGGGCAAAAGAG+GGG | + | Chr5:4346067-4346086 | MsG0580024402.01.T01:CDS | 35.0% | |
| TTTGAGAGAATGACTATGGT+TGG | + | Chr5:4346144-4346163 | MsG0580024402.01.T01:CDS | 35.0% | |
| AGTGTTCCACCATTGTTTGA+TGG | + | Chr5:4346249-4346268 | MsG0580024402.01.T01:CDS | 40.0% | |
| GATGGCCTAATAGTTGGATT+AGG | - | Chr5:4346186-4346205 | None:intergenic | 40.0% | |
| GCAATAGATGGCCTAATAGT+TGG | - | Chr5:4346192-4346211 | None:intergenic | 40.0% | |
| GGTTCTATATTGGGCAAAAG+AGG | + | Chr5:4346065-4346084 | MsG0580024402.01.T01:CDS | 40.0% | |
| TAGAGGGACAATGGGATATT+TGG | + | Chr5:4345872-4345891 | MsG0580024402.01.T01:CDS | 40.0% | |
| TGCAACACCTTTGCAATAGA+TGG | - | Chr5:4346204-4346223 | None:intergenic | 40.0% | |
| TGTGCCCTAATCCAACTATT+AGG | + | Chr5:4346178-4346197 | MsG0580024402.01.T01:CDS | 40.0% | |
| ! | CAAGTTGAAGATGGAACAGA+AGG | + | Chr5:4346015-4346034 | MsG0580024402.01.T01:CDS | 40.0% |
| !! | CAATCCACTTTTGCAGTGAT+AGG | - | Chr5:4345921-4345940 | None:intergenic | 40.0% |
| !! | GAGTTGCATCAAGTTGAAGA+TGG | + | Chr5:4346006-4346025 | MsG0580024402.01.T01:CDS | 40.0% |
| !! | GCAAAAGTGGATTGCAAAAG+TGG | + | Chr5:4345927-4345946 | MsG0580024402.01.T01:CDS | 40.0% |
| GAATGACTATGGTTGGACTG+TGG | + | Chr5:4346151-4346170 | MsG0580024402.01.T01:CDS | 45.0% | |
| GTTGAAGATGGAACAGAAGG+TGG | + | Chr5:4346018-4346037 | MsG0580024402.01.T01:CDS | 45.0% | |
| TGCACCTATCACTGCAAAAG+TGG | + | Chr5:4345914-4345933 | MsG0580024402.01.T01:CDS | 45.0% | |
| TGGGATATTTGGCACCAGAA+TGG | + | Chr5:4345883-4345902 | MsG0580024402.01.T01:CDS | 45.0% | |
| !! | GGTGCATTTTTGAGCCATTC+TGG | - | Chr5:4345900-4345919 | None:intergenic | 45.0% |
| !! | TGCAAAGGTGTTGCAGATGT+CGG | + | Chr5:4346209-4346228 | MsG0580024402.01.T01:CDS | 45.0% |
| !! | AAGGTGTTGCAGATGTCGGA+AGG | + | Chr5:4346213-4346232 | MsG0580024402.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 4345868 | 4346284 | 4345868 | ID=MsG0580024402.01;Name=MsG0580024402.01 |
| Chr5 | mRNA | 4345868 | 4346284 | 4345868 | ID=MsG0580024402.01.T01;Parent=MsG0580024402.01;Name=MsG0580024402.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|138 |
| Chr5 | exon | 4345868 | 4346284 | 4345868 | ID=MsG0580024402.01.T01:exon:4470;Parent=MsG0580024402.01.T01 |
| Chr5 | CDS | 4345868 | 4346284 | 4345868 | ID=MsG0580024402.01.T01:cds;Parent=MsG0580024402.01.T01 |
| Gene Sequence |
| Protein sequence |
