AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023959.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023959.01.T01 MTR_8g105860 75.836 269 4 2 1 237 140 379 1.40e-136 389
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023959.01.T01 AT1G14810 65.428 269 32 2 1 237 136 375 1.77e-106 312
MsG0480023959.01.T01 AT1G14810 67.665 167 22 1 1 135 136 302 6.59e-61 194

Find 134 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTACTATTATTTGTTTAA+TGG 0.114614 4:+91711287 MsG0480023959.01.T01:CDS
GCCCGGAGCGGATGCATAAT+TGG 0.173194 4:-91710844 None:intergenic
CAATGGAGTAGGAAAATTAT+TGG 0.222930 4:-91713789 None:intergenic
GTGTATTTCATGTTTGAATA+TGG 0.247654 4:+91713540 MsG0480023959.01.T01:CDS
TTAATCTTCTCCATTGCTTC+TGG 0.255450 4:-91711222 None:intergenic
GTGCAGCTCCCTTGCGAATT+TGG 0.261292 4:-91713996 None:intergenic
AGTTGGAAGTGGTAGTTCTT+TGG 0.279577 4:+91714122 MsG0480023959.01.T01:three_prime_UTR
TGGGTTTGGGTCGGGTAGTT+GGG 0.299399 4:-91710824 None:intergenic
AGCGGATGCATAATTGGGTT+TGG 0.313631 4:-91710838 None:intergenic
TAAAATTGTATAGGCCTATA+GGG 0.314015 4:-91713572 None:intergenic
AGATATAGAGAGAGAGATGT+TGG 0.321432 4:-91710668 None:intergenic
TTGGGTTTGGGTCGGGTAGT+TGG 0.325955 4:-91710825 None:intergenic
TTAAAATTGTATAGGCCTAT+AGG 0.338524 4:-91713573 None:intergenic
GCAATGGAGAAGATTAAGTT+TGG 0.338990 4:+91711228 MsG0480023959.01.T01:CDS
TCCATTGGAAGTGTCAAATA+AGG 0.349593 4:+91713805 MsG0480023959.01.T01:CDS
CAAATAATAGTAGAACAATT+AGG 0.370829 4:-91711279 None:intergenic
ATTGCTTCTGGATTCACTTC+AGG 0.376282 4:-91711210 None:intergenic
GCGGATGCATAATTGGGTTT+GGG 0.380016 4:-91710837 None:intergenic
GCTTTGATGCGAGCATTTGA+TGG 0.385837 4:-91710979 None:intergenic
TGCATAATTGGGTTTGGGTC+GGG 0.387523 4:-91710832 None:intergenic
CCCGGAGCGGATGCATAATT+GGG 0.393869 4:-91710843 None:intergenic
GGTGCGAGAGAAAGGTGTTT+TGG 0.397702 4:-91710799 None:intergenic
GTTTGGGTCGGGTAGTTGGG+AGG 0.404557 4:-91710821 None:intergenic
GTTCCACGATTCACCGCAAT+TGG 0.408055 4:-91711129 None:intergenic
GTTGGGAGGGTGCGAGAGAA+AGG 0.414801 4:-91710807 None:intergenic
CCCAATTATGCATCCGCTCC+GGG 0.418682 4:+91710843 MsG0480023959.01.T01:five_prime_UTR
GAGAAGATTAAGTTTGGAAT+GGG 0.424927 4:+91711234 MsG0480023959.01.T01:CDS
AGAGCTATTATCAACAACTA+TGG 0.432417 4:-91711151 None:intergenic
ATCAGTTTGTATCTCCTAGT+TGG 0.432524 4:+91714105 MsG0480023959.01.T01:three_prime_UTR
TATGGAATGGTGGCCCCTAT+AGG 0.438854 4:+91713558 MsG0480023959.01.T01:CDS
ATAGCAACAACTCGGCGATC+TGG 0.439146 4:-91714029 None:intergenic
TATGGTTGTTAGTACCTATC+AGG 0.441485 4:+91711957 MsG0480023959.01.T01:CDS
CTCGCATCAAAGCGCTCCGC+CGG 0.444037 4:+91710989 MsG0480023959.01.T01:five_prime_UTR
TGAATAACAAGCATTGGTTA+TGG 0.451858 4:+91714268 MsG0480023959.01.T01:three_prime_UTR
CTATCTCAGGATGGGAATCA+AGG 0.452068 4:+91713860 MsG0480023959.01.T01:CDS
AGGACGATGTTGCTGTTGGC+AGG 0.456276 4:+91713825 MsG0480023959.01.T01:CDS
TTCGAAGGTCATGCGGCGGC+CGG 0.460742 4:-91711008 None:intergenic
ATGCATAATTGGGTTTGGGT+CGG 0.461131 4:-91710833 None:intergenic
GGAGAAGATTAAGTTTGGAA+TGG 0.462186 4:+91711233 MsG0480023959.01.T01:CDS
ACCCAATTATGCATCCGCTC+CGG 0.462555 4:+91710842 MsG0480023959.01.T01:five_prime_UTR
TAGGAAAATTATTGGATTCA+CGG 0.463114 4:-91713781 None:intergenic
CTTGATTCCCATCCTGAGAT+AGG 0.465291 4:-91713859 None:intergenic
ATTAAGTTTGGAATGGGAAA+AGG 0.465783 4:+91711240 MsG0480023959.01.T01:CDS
AAACTCTTGGCCGACGGCGC+CGG 0.468934 4:-91710920 None:intergenic
GACCCTGCTTAAAATTGTAT+AGG 0.476267 4:-91713581 None:intergenic
GATATAGAGAGAGAGATGTT+GGG 0.483183 4:-91710667 None:intergenic
TGACTCCACGACGGCGATGG+TGG 0.485292 4:-91710897 None:intergenic
GACTCCACGACGGCGATGGT+GGG 0.488287 4:-91710896 None:intergenic
CGTGGAGTCACCGGCGCCGT+CGG 0.491331 4:+91710910 MsG0480023959.01.T01:five_prime_UTR
TCCTTATTTGACACTTCCAA+TGG 0.493635 4:-91713806 None:intergenic
AGAAAGTGTGCAAATAATCA+AGG 0.496776 4:-91714226 None:intergenic
AGCTCCACTAGCCGCCTGAT+AGG 0.498168 4:-91711971 None:intergenic
TGGAGCTGGTGCTGCTGCAA+TGG 0.507471 4:+91711987 MsG0480023959.01.T01:CDS
TATCAGGCGGCTAGTGGAGC+TGG 0.507716 4:+91711973 MsG0480023959.01.T01:CDS
TTTGGGTCGGGTAGTTGGGA+GGG 0.508579 4:-91710820 None:intergenic
CTAGAGAGAGAAAGAAGAGA+GGG 0.509566 4:-91710715 None:intergenic
CACGTACTCTTTATCTTCGA+AGG 0.511604 4:-91711023 None:intergenic
CATCGCCGTCGTGGAGTCAC+CGG 0.513834 4:+91710901 MsG0480023959.01.T01:five_prime_UTR
ATGCTTGTTATTCATTCCAC+AGG 0.515453 4:-91714259 None:intergenic
GAAGGTCATGCGGCGGCCGG+CGG 0.522784 4:-91711005 None:intergenic
TAGTAATAGTTACCTCATCA+AGG 0.523771 4:-91712538 None:intergenic
TCTGCATGAGCCCGCATGAC+GGG 0.525434 4:-91712489 None:intergenic
TTTGACACTTCCAATGGAGT+AGG 0.527459 4:-91713800 None:intergenic
CTTTATCTTCGAAGGTCATG+CGG 0.528137 4:-91711015 None:intergenic
TTGTATCTCCTAGTTGGAAG+TGG 0.528796 4:+91714111 MsG0480023959.01.T01:three_prime_UTR
AGTACCTATCAGGCGGCTAG+TGG 0.530566 4:+91711967 MsG0480023959.01.T01:CDS
CTGATTCAAAAGTAACTTGG+AGG 0.531095 4:-91714087 None:intergenic
AGATAAAGAGTACGTGGTGG+AGG 0.531716 4:+91711030 MsG0480023959.01.T01:five_prime_UTR
CGGTGACTCCACGACGGCGA+TGG 0.532216 4:-91710900 None:intergenic
ATGTAAAATATTTAACCGAC+AGG 0.534319 4:+91712163 MsG0480023959.01.T01:CDS
GATTCGCCGTGACCTATCTC+AGG 0.534411 4:+91713847 MsG0480023959.01.T01:CDS
GACATTGCTCTCTTCAGCGC+AGG 0.534846 4:+91711082 MsG0480023959.01.T01:five_prime_UTR
CGCCGTGACCTATCTCAGGA+TGG 0.536625 4:+91713851 MsG0480023959.01.T01:CDS
ATGTCAAGGTTTCGCTGAGT+TGG 0.538971 4:+91714062 MsG0480023959.01.T01:three_prime_UTR
AAACTGATTCAAAAGTAACT+TGG 0.543137 4:-91714090 None:intergenic
GTGGAATGAATAACAAGCAT+TGG 0.551346 4:+91714262 MsG0480023959.01.T01:three_prime_UTR
GAGGGACATTCGGACCCGCC+CGG 0.557411 4:-91710861 None:intergenic
ATTGCTCTCTTCAGCGCAGG+TGG 0.557990 4:+91711085 MsG0480023959.01.T01:five_prime_UTR
ACCTTGGCATGTCGATGAAG+AGG 0.558581 4:-91711318 None:intergenic
AAGAACTACCACTTCCAACT+AGG 0.559120 4:-91714119 None:intergenic
GAAGAATGCTCCGGGTGTAG+TGG 0.560034 4:+91713748 MsG0480023959.01.T01:CDS
AACCCACACGAATCAATCAA+TGG 0.561869 4:+91710754 MsG0480023959.01.T01:five_prime_UTR
ATTATGCATCCGCTCCGGGC+GGG 0.562897 4:+91710847 MsG0480023959.01.T01:five_prime_UTR
AGCCATTGATTGATTCGTGT+GGG 0.563435 4:-91710756 None:intergenic
GGTCCAATTGCGGTGAATCG+TGG 0.564018 4:+91711126 MsG0480023959.01.T01:five_prime_UTR
CCTTGGCATGTCGATGAAGA+GGG 0.565092 4:-91711317 None:intergenic
CCCTCTTCATCGACATGCCA+AGG 0.565506 4:+91711317 MsG0480023959.01.T01:CDS
CTATGAGTTCTAATATGTCA+AGG 0.566040 4:+91714048 MsG0480023959.01.T01:exon
TATACGAGTACCCGTCATGC+GGG 0.568049 4:+91712479 MsG0480023959.01.T01:CDS
AGAGGACAGAGAGAAACTCT+TGG 0.568304 4:-91710933 None:intergenic
TGAAGTGAATCCAGAAGCAA+TGG 0.569298 4:+91711212 MsG0480023959.01.T01:CDS
GCTTGAGCTGCAGACTCGAG+AGG 0.573743 4:+91712014 MsG0480023959.01.T01:CDS
CGCACCCACCATCGCCGTCG+TGG 0.576005 4:+91710892 MsG0480023959.01.T01:five_prime_UTR
CTCTGCATGAGCCCGCATGA+CGG 0.576671 4:-91712490 None:intergenic
TGTAAGGTTTAGCTAGTCAG+AGG 0.581876 4:+91714148 MsG0480023959.01.T01:three_prime_UTR
AAGCCATTGATTGATTCGTG+TGG 0.581999 4:-91710757 None:intergenic
AATAAGGACGATGTTGCTGT+TGG 0.590278 4:+91713821 MsG0480023959.01.T01:CDS
TCCCATCCTGAGATAGGTCA+CGG 0.591328 4:-91713853 None:intergenic
TTTCATGTTTGAATATGGAA+TGG 0.595925 4:+91713545 MsG0480023959.01.T01:CDS
GCCGTGACCTATCTCAGGAT+GGG 0.601272 4:+91713852 MsG0480023959.01.T01:CDS
ATGTGGGGACCAAATTCGCA+AGG 0.601803 4:+91713987 MsG0480023959.01.T01:CDS
GTACGTGGTGGAGGAGCTGA+CGG 0.603562 4:+91711039 MsG0480023959.01.T01:five_prime_UTR
CTTTCTGTAATCCGCTCCTG+TGG 0.604884 4:+91714243 MsG0480023959.01.T01:three_prime_UTR
GAGCATTTGATGGAGCTGTA+TGG 0.605178 4:-91710969 None:intergenic
TCTAGAGAGAGAAAGAAGAG+AGG 0.619157 4:-91710716 None:intergenic
AGTAATAGTTACCTCATCAA+GGG 0.619645 4:-91712537 None:intergenic
CATGTTTGAATATGGAATGG+TGG 0.619674 4:+91713548 MsG0480023959.01.T01:CDS
TATCTCAGGATGGGAATCAA+GGG 0.620295 4:+91713861 MsG0480023959.01.T01:CDS
TGGTTCAATCAGTAAAGAGT+TGG 0.620679 4:+91711105 MsG0480023959.01.T01:five_prime_UTR
AATGCTACAGGTGTTGCGTA+TGG 0.623957 4:+91711939 MsG0480023959.01.T01:intron
TGTTATTCATTCCACAGGAG+CGG 0.626178 4:-91714254 None:intergenic
TCATCAATAACCACTACACC+CGG 0.632807 4:-91713758 None:intergenic
AGCTGTATGGAAGTCGCGGT+CGG 0.633844 4:-91710956 None:intergenic
ACATTCGGACCCGCCCGGAG+CGG 0.634934 4:-91710856 None:intergenic
AAAATTGTATAGGCCTATAG+GGG 0.637104 4:-91713571 None:intergenic
TTCACTTCAGGTATCACCAA+CGG 0.640310 4:-91711198 None:intergenic
AGAGAGAAACTCTTGGCCGA+CGG 0.641713 4:-91710926 None:intergenic
AATTCGAGAGACCCTTGATG+AGG 0.641742 4:+91712526 MsG0480023959.01.T01:CDS
GTAAAGAGTTGGTCCAATTG+CGG 0.643134 4:+91711116 MsG0480023959.01.T01:five_prime_UTR
CTGACGGCGGAGAGTTTCGA+CGG 0.643295 4:+91711055 MsG0480023959.01.T01:five_prime_UTR
AATTATGCATCCGCTCCGGG+CGG 0.647677 4:+91710846 MsG0480023959.01.T01:five_prime_UTR
AATGGATGAGAATGTTCCGT+TGG 0.647729 4:+91711182 MsG0480023959.01.T01:exon
TATGGAAGTCGCGGTCGGAG+AGG 0.652347 4:-91710951 None:intergenic
ATGGAGCTGTATGGAAGTCG+CGG 0.655790 4:-91710960 None:intergenic
CTTCGAAGATAAAGAGTACG+TGG 0.658632 4:+91711024 MsG0480023959.01.T01:five_prime_UTR
CTTGGCATGTCGATGAAGAG+GGG 0.672470 4:-91711316 None:intergenic
TATCTTCGAAGGTCATGCGG+CGG 0.677007 4:-91711012 None:intergenic
TAGAACTCATAGCAACAACT+CGG 0.688843 4:-91714037 None:intergenic
GGTTGTTAGTACCTATCAGG+CGG 0.692262 4:+91711960 MsG0480023959.01.T01:CDS
TGTGGGGACCAAATTCGCAA+GGG 0.701250 4:+91713988 MsG0480023959.01.T01:CDS
GTATACGAGTACCCGTCATG+CGG 0.702661 4:+91712478 MsG0480023959.01.T01:CDS
CGGCGCCGGTGACTCCACGA+CGG 0.705808 4:-91710906 None:intergenic
CGTGGTGGAGGAGCTGACGG+CGG 0.713406 4:+91711042 MsG0480023959.01.T01:five_prime_UTR
CGAAGATAAAGAGTACGTGG+TGG 0.716764 4:+91711027 MsG0480023959.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAATATTAATTTATAT+CGG + Chr4:91712680-91712699 MsG0480023959.01.T01:intron 0.0%
!!! TAAATTAATATTTTTAAAAA+TGG - Chr4:91712677-91712696 None:intergenic 0.0%
!! TAATAAATCACACTAAAAAA+TGG - Chr4:91711869-91711888 None:intergenic 15.0%
!! TTCTACTATTATTTGTTTAA+TGG + Chr4:91711287-91711306 MsG0480023959.01.T01:CDS 15.0%
!!! AAAATTGATTTTGAAATGTT+TGG - Chr4:91711756-91711775 None:intergenic 15.0%
!!! TTTAATTTCACTTATATATG+AGG - Chr4:91711800-91711819 None:intergenic 15.0%
!! ATATTAATTTATATCGGACT+CGG + Chr4:91712686-91712705 MsG0480023959.01.T01:intron 20.0%
!! CAAATAATAGTAGAACAATT+AGG - Chr4:91711282-91711301 None:intergenic 20.0%
!! TGAAATTAAACTTACACTTA+TGG + Chr4:91711810-91711829 MsG0480023959.01.T01:intron 20.0%
!! TGAGTTCATTTATTTATGTT+TGG + Chr4:91711590-91711609 MsG0480023959.01.T01:intron 20.0%
!! TTAAAATTGTATAGGACTAT+AGG - Chr4:91713474-91713493 None:intergenic 20.0%
!! TTTGATTAAGTAACAAATTC+AGG + Chr4:91713336-91713355 MsG0480023959.01.T01:intron 20.0%
!!! GTTTTGTTTTTTGACTTTTA+AGG + Chr4:91712118-91712137 MsG0480023959.01.T01:intron 20.0%
!!! TCAATTGTCTTATTGAAAAA+TGG + Chr4:91711384-91711403 MsG0480023959.01.T01:intron 20.0%
!!! TCATAATCATTTTACATGAA+TGG + Chr4:91713935-91713954 MsG0480023959.01.T01:intron 20.0%
!!! TCCTATACAATTTTAAGTTT+TGG + Chr4:91713478-91713497 MsG0480023959.01.T01:intron 20.0%
!!! TGTTGCTAAAATTAGTTTTA+GGG + Chr4:91713199-91713218 MsG0480023959.01.T01:intron 20.0%
!!! TTAAATATTTTACATGTTGG+TGG - Chr4:91712158-91712177 None:intergenic 20.0%
!!! TTTTTTGACTTTTAAGGTAT+TGG + Chr4:91712124-91712143 MsG0480023959.01.T01:intron 20.0%
! AAAGTGGATATTCATGTAAA+AGG + Chr4:91711508-91711527 MsG0480023959.01.T01:intron 25.0%
! AAGTGGATATTCATGTAAAA+GGG + Chr4:91711509-91711528 MsG0480023959.01.T01:intron 25.0%
! AGCGTAAATATATTCTATTC+AGG + Chr4:91711726-91711745 MsG0480023959.01.T01:intron 25.0%
! ATATGAAGAAGAAATGAAAC+TGG + Chr4:91712311-91712330 MsG0480023959.01.T01:intron 25.0%
! ATGTAAAATATTTAACCGAC+AGG + Chr4:91712163-91712182 MsG0480023959.01.T01:CDS 25.0%
! CTATCTCATATTCTAGTATT+GGG + Chr4:91712043-91712062 MsG0480023959.01.T01:intron 25.0%
! GCCAAAACTTAAAATTGTAT+AGG - Chr4:91713482-91713501 None:intergenic 25.0%
! GTGTATTTCATGTTTGAATA+TGG + Chr4:91713540-91713559 MsG0480023959.01.T01:CDS 25.0%
! TAAAATTGTATAGGCCTATA+GGG - Chr4:91713575-91713594 None:intergenic 25.0%
! TAGGAAAATTATTGGATTCA+CGG - Chr4:91713784-91713803 None:intergenic 25.0%
! TCATCAACAAACTTCAATAA+TGG - Chr4:91712858-91712877 None:intergenic 25.0%
! TCTATCTCATATTCTAGTAT+TGG + Chr4:91712042-91712061 MsG0480023959.01.T01:intron 25.0%
! TTAAAATTGTATAGGCCTAT+AGG - Chr4:91713576-91713595 None:intergenic 25.0%
! TTGATATAGGGTGATTATAA+GGG + Chr4:91712972-91712991 MsG0480023959.01.T01:intron 25.0%
! TTTCAGAATCTCAAGATAAA+GGG + Chr4:91712946-91712965 MsG0480023959.01.T01:intron 25.0%
! TTTCATGTTTGAATATGGAA+TGG + Chr4:91713545-91713564 MsG0480023959.01.T01:CDS 25.0%
! TTTGATATAGGGTGATTATA+AGG + Chr4:91712971-91712990 MsG0480023959.01.T01:intron 25.0%
!! AAACTGATTCAAAAGTAACT+TGG - Chr4:91714093-91714112 None:intergenic 25.0%
!! ATACTCATTTAGTTAAGTTG+AGG + Chr4:91712816-91712835 MsG0480023959.01.T01:intron 25.0%
!! CCTTTTCATTTGAAAAACAA+AGG + Chr4:91712602-91712621 MsG0480023959.01.T01:intron 25.0%
!! CGGTTAAATATTTTACATGT+TGG - Chr4:91712161-91712180 None:intergenic 25.0%
!! TAATCATTTTACATGAATGG+TGG + Chr4:91713938-91713957 MsG0480023959.01.T01:intron 25.0%
!! TCACTTTGTAAAATTGATTC+TGG + Chr4:91711482-91711501 MsG0480023959.01.T01:intron 25.0%
!!! ACAAGGAAATACATTTTTAG+TGG + Chr4:91713645-91713664 MsG0480023959.01.T01:intron 25.0%
!!! ATTATTGAAGTTTGTTGATG+AGG + Chr4:91712857-91712876 MsG0480023959.01.T01:intron 25.0%
!!! CCTTTGTTTTTCAAATGAAA+AGG - Chr4:91712605-91712624 None:intergenic 25.0%
!!! GTGTTGCTAAAATTAGTTTT+AGG + Chr4:91713198-91713217 MsG0480023959.01.T01:intron 25.0%
!!! TACTCATTTAGTTAAGTTGA+GGG + Chr4:91712817-91712836 MsG0480023959.01.T01:intron 25.0%
!!! TGTTGCTAGAATTAGTTTTA+GGG + Chr4:91713025-91713044 MsG0480023959.01.T01:intron 25.0%
AAAATTGTATAGGCCTATAG+GGG - Chr4:91713574-91713593 None:intergenic 30.0%
AATCAAGGGTAATTATTCTG+TGG + Chr4:91713875-91713894 MsG0480023959.01.T01:intron 30.0%
ACATATAAAAATGTCCAACC+TGG - Chr4:91713971-91713990 None:intergenic 30.0%
ACTTATGTGAGGAAAAAAAC+TGG + Chr4:91712067-91712086 MsG0480023959.01.T01:intron 30.0%
AGAACACGAAGTTAATACAA+AGG - Chr4:91712899-91712918 None:intergenic 30.0%
AGAGCTATTATCAACAACTA+TGG - Chr4:91711154-91711173 None:intergenic 30.0%
AGTAATAGTTACCTCATCAA+GGG - Chr4:91712540-91712559 None:intergenic 30.0%
AGTCTTTGATCTCAAATTGA+AGG + Chr4:91712096-91712115 MsG0480023959.01.T01:intron 30.0%
ATCTCACATCTGAATTTCTT+TGG + Chr4:91713690-91713709 MsG0480023959.01.T01:intron 30.0%
CAAAGAAAATGTGTGTTCTT+TGG + Chr4:91712734-91712753 MsG0480023959.01.T01:intron 30.0%
CAATGGAGTAGGAAAATTAT+TGG - Chr4:91713792-91713811 None:intergenic 30.0%
CTTAATCAAAAAGACTTGTG+AGG - Chr4:91713326-91713345 None:intergenic 30.0%
GAAACACGAAGTTAATACAA+AGG - Chr4:91713074-91713093 None:intergenic 30.0%
GCTTTATCTGCATTATATTC+AGG + Chr4:91713273-91713292 MsG0480023959.01.T01:intron 30.0%
GTTTCAGAATCTCAAGATAA+AGG + Chr4:91712945-91712964 MsG0480023959.01.T01:intron 30.0%
GTTTGATTGATAAATGCTAC+AGG + Chr4:91711927-91711946 MsG0480023959.01.T01:intron 30.0%
TAAGTTATGCAGGATTTCTA+AGG + Chr4:91713251-91713270 MsG0480023959.01.T01:intron 30.0%
TAGTAATAGTTACCTCATCA+AGG - Chr4:91712541-91712560 None:intergenic 30.0%
TATGGTGTATAGTGTTTGAT+GGG + Chr4:91711828-91711847 MsG0480023959.01.T01:intron 30.0%
TTAACTTCGTGTTTCTTGTA+TGG + Chr4:91713079-91713098 MsG0480023959.01.T01:intron 30.0%
TTATGGTGTATAGTGTTTGA+TGG + Chr4:91711827-91711846 MsG0480023959.01.T01:intron 30.0%
! AAATTGATTCTGGCTAAAAG+TGG + Chr4:91711492-91711511 MsG0480023959.01.T01:intron 30.0%
! AGAAAGTGTGCAAATAATCA+AGG - Chr4:91714229-91714248 None:intergenic 30.0%
! AGATAAAGGGCTTTTGATAT+AGG + Chr4:91712959-91712978 MsG0480023959.01.T01:intron 30.0%
! AGGTTGGACATTTTTATATG+TGG + Chr4:91713970-91713989 MsG0480023959.01.T01:intron 30.0%
! ATTAAGTTTGGAATGGGAAA+AGG + Chr4:91711240-91711259 MsG0480023959.01.T01:CDS 30.0%
! CAATAATTTTCCTACTCCAT+TGG + Chr4:91713790-91713809 MsG0480023959.01.T01:CDS 30.0%
! CATTTTCTTTGCCTCATTTT+TGG - Chr4:91712725-91712744 None:intergenic 30.0%
! CTATGAGTTCTAATATGTCA+AGG + Chr4:91714048-91714067 MsG0480023959.01.T01:exon 30.0%
! GAGAAGATTAAGTTTGGAAT+GGG + Chr4:91711234-91711253 MsG0480023959.01.T01:CDS 30.0%
! GATAAAGGGCTTTTGATATA+GGG + Chr4:91712960-91712979 MsG0480023959.01.T01:intron 30.0%
! GGTTGGACATTTTTATATGT+GGG + Chr4:91713971-91713990 MsG0480023959.01.T01:intron 30.0%
! GTGTTTATGTTGATTGAGTA+TGG + Chr4:91713438-91713457 MsG0480023959.01.T01:intron 30.0%
! GTTGGACATTTTTATATGTG+GGG + Chr4:91713972-91713991 MsG0480023959.01.T01:CDS 30.0%
! TATGTTGATTGAGTATGGAA+TGG + Chr4:91713443-91713462 MsG0480023959.01.T01:intron 30.0%
! TCAATTCTAGAGGCAAAAAT+TGG + Chr4:91711640-91711659 MsG0480023959.01.T01:intron 30.0%
! TTCTTTCTGTATGTTGACTA+AGG + Chr4:91712915-91712934 MsG0480023959.01.T01:intron 30.0%
! TTTTTCCTTTCAGAATGACA+AGG + Chr4:91712434-91712453 MsG0480023959.01.T01:intron 30.0%
!! AGATATTTTGAAGAATGCTC+CGG + Chr4:91713739-91713758 MsG0480023959.01.T01:CDS 30.0%
!! ATGAACTCACTTTTAACAAG+AGG - Chr4:91711579-91711598 None:intergenic 30.0%
!! TGAATAACAAGCATTGGTTA+TGG + Chr4:91714268-91714287 MsG0480023959.01.T01:three_prime_UTR 30.0%
!!! CTCTAATGATTTTGAAGTTC+AGG + Chr4:91712207-91712226 MsG0480023959.01.T01:intron 30.0%
!!! GTGTTGCTAGAATTAGTTTT+AGG + Chr4:91713024-91713043 MsG0480023959.01.T01:intron 30.0%
!!! TCTTTGGTTTTAATATCCTC+AGG + Chr4:91713706-91713725 MsG0480023959.01.T01:intron 30.0%
!!! TTGACTTTTAAGGTATTGGA+AGG + Chr4:91712128-91712147 MsG0480023959.01.T01:intron 30.0%
AATGCATCTGTTCTTTCGAA+CGG + Chr4:91712286-91712305 MsG0480023959.01.T01:intron 35.0%
AGAAGAAATGAAACTGGTCA+AGG + Chr4:91712317-91712336 MsG0480023959.01.T01:intron 35.0%
AGATATAGAGAGAGAGATGT+TGG - Chr4:91710671-91710690 None:intergenic 35.0%
AGGCTAGAAATCAATTCTAG+AGG + Chr4:91711630-91711649 MsG0480023959.01.T01:intron 35.0%
ATCAGTTTGTATCTCCTAGT+TGG + Chr4:91714105-91714124 MsG0480023959.01.T01:three_prime_UTR 35.0%
ATGGTGTATAGTGTTTGATG+GGG + Chr4:91711829-91711848 MsG0480023959.01.T01:intron 35.0%
CAAGGAGACAAGGAAAATTT+GGG + Chr4:91712335-91712354 MsG0480023959.01.T01:intron 35.0%
CAATTTATGTAGAGCGTGTT+TGG + Chr4:91711429-91711448 MsG0480023959.01.T01:intron 35.0%
CATGTTTGAATATGGAATGG+TGG + Chr4:91713548-91713567 MsG0480023959.01.T01:CDS 35.0%
CTACATGACCATATGAATGT+GGG - Chr4:91713624-91713643 None:intergenic 35.0%
CTGATTCAAAAGTAACTTGG+AGG - Chr4:91714090-91714109 None:intergenic 35.0%
GACCCTGCTTAAAATTGTAT+AGG - Chr4:91713584-91713603 None:intergenic 35.0%
GAGGCAAAAATTGGTTACTA+CGG + Chr4:91711649-91711668 MsG0480023959.01.T01:intron 35.0%
GATATAGAGAGAGAGATGTT+GGG - Chr4:91710670-91710689 None:intergenic 35.0%
GCAATGGAGAAGATTAAGTT+TGG + Chr4:91711228-91711247 MsG0480023959.01.T01:CDS 35.0%
GGAGAAGATTAAGTTTGGAA+TGG + Chr4:91711233-91711252 MsG0480023959.01.T01:CDS 35.0%
GTGGAATGAATAACAAGCAT+TGG + Chr4:91714262-91714281 MsG0480023959.01.T01:three_prime_UTR 35.0%
GTTTCTTGTATGGTTGACTA+AGG + Chr4:91713089-91713108 MsG0480023959.01.T01:intron 35.0%
TAGAACTCATAGCAACAACT+CGG - Chr4:91714040-91714059 None:intergenic 35.0%
TATGGTTGTTAGTACCTATC+AGG + Chr4:91711957-91711976 MsG0480023959.01.T01:CDS 35.0%
TATTCCAAATCCAGTACATC+TGG + Chr4:91712634-91712653 MsG0480023959.01.T01:intron 35.0%
TCAAGGAGACAAGGAAAATT+TGG + Chr4:91712334-91712353 MsG0480023959.01.T01:intron 35.0%
TCATCATGCATAAGTTATGC+AGG + Chr4:91713241-91713260 MsG0480023959.01.T01:intron 35.0%
TGGATATGCATGTAAATCTG+AGG + Chr4:91711610-91711629 MsG0480023959.01.T01:intron 35.0%
TGGTTCAATCAGTAAAGAGT+TGG + Chr4:91711105-91711124 MsG0480023959.01.T01:five_prime_UTR 35.0%
TTAATCTTCTCCATTGCTTC+TGG - Chr4:91711225-91711244 None:intergenic 35.0%
TTCTTTGGTATCTGATGGTT+TGG + Chr4:91712749-91712768 MsG0480023959.01.T01:intron 35.0%
! AAAGAGCATAACATACCTGT+CGG - Chr4:91712181-91712200 None:intergenic 35.0%
! AGGCCTATACAATTTTAAGC+AGG + Chr4:91713578-91713597 MsG0480023959.01.T01:CDS 35.0%
! CTAGTCAGAGGAATTTTTCA+AGG + Chr4:91714160-91714179 MsG0480023959.01.T01:three_prime_UTR 35.0%
! GCTTGAACACATTTTTGTCA+TGG + Chr4:91714203-91714222 MsG0480023959.01.T01:three_prime_UTR 35.0%
! GGCCTATACAATTTTAAGCA+GGG + Chr4:91713579-91713598 MsG0480023959.01.T01:CDS 35.0%
! TAGTATTGGGAACTTATGTG+AGG + Chr4:91712056-91712075 MsG0480023959.01.T01:intron 35.0%
! TATGAGGCAAAACTGATTTC+AGG - Chr4:91711784-91711803 None:intergenic 35.0%
! TCCTTATTTGACACTTCCAA+TGG - Chr4:91713809-91713828 None:intergenic 35.0%
! TTCTGTATGTTGACTAAGGA+GGG + Chr4:91712919-91712938 MsG0480023959.01.T01:intron 35.0%
! TTTAGTTTAGCGTATACTGC+TGG + Chr4:91713412-91713431 MsG0480023959.01.T01:intron 35.0%
! TTTCTGTATGTTGACTAAGG+AGG + Chr4:91712918-91712937 MsG0480023959.01.T01:intron 35.0%
!! ATGCTTGTTATTCATTCCAC+AGG - Chr4:91714262-91714281 None:intergenic 35.0%
!! GATATTTTGAAGAATGCTCC+GGG + Chr4:91713740-91713759 MsG0480023959.01.T01:CDS 35.0%
!! TAATAGCTCTGCTTTTCGAA+TGG + Chr4:91711164-91711183 MsG0480023959.01.T01:exon 35.0%
!! TCCATTGGAAGTGTCAAATA+AGG + Chr4:91713805-91713824 MsG0480023959.01.T01:CDS 35.0%
!! TTCTTTGCCTCATTTTTGGA+GGG - Chr4:91712721-91712740 None:intergenic 35.0%
!! TTTCTTTGCCTCATTTTTGG+AGG - Chr4:91712722-91712741 None:intergenic 35.0%
!!! GAATTAGTTTTAGGGCTAAG+TGG + Chr4:91713033-91713052 MsG0480023959.01.T01:intron 35.0%
!!! GGTAGTTCTTTGGTTTTGTA+AGG + Chr4:91714132-91714151 MsG0480023959.01.T01:three_prime_UTR 35.0%
AACCCACACGAATCAATCAA+TGG + Chr4:91710754-91710773 MsG0480023959.01.T01:five_prime_UTR 40.0%
AAGAACTACCACTTCCAACT+AGG - Chr4:91714122-91714141 None:intergenic 40.0%
AAGCGAAAAAGAACGAACCT+TGG - Chr4:91711337-91711356 None:intergenic 40.0%
AATAAGGACGATGTTGCTGT+TGG + Chr4:91713821-91713840 MsG0480023959.01.T01:CDS 40.0%
AATGGATGAGAATGTTCCGT+TGG + Chr4:91711182-91711201 MsG0480023959.01.T01:exon 40.0%
ACTACGGAAGAATATTCACG+TGG + Chr4:91711665-91711684 MsG0480023959.01.T01:intron 40.0%
AGTTGGAAGTGGTAGTTCTT+TGG + Chr4:91714122-91714141 MsG0480023959.01.T01:three_prime_UTR 40.0%
AGTTGTGTGTGTGCTTTGTA+TGG + Chr4:91711888-91711907 MsG0480023959.01.T01:intron 40.0%
ATATTCCCCCTCCAAAAATG+AGG + Chr4:91712711-91712730 MsG0480023959.01.T01:intron 40.0%
ATGCATAATTGGGTTTGGGT+CGG - Chr4:91710836-91710855 None:intergenic 40.0%
ATGTCATGCCCACATTCATA+TGG + Chr4:91713613-91713632 MsG0480023959.01.T01:intron 40.0%
ATTGCTTCTGGATTCACTTC+AGG - Chr4:91711213-91711232 None:intergenic 40.0%
CACGTACTCTTTATCTTCGA+AGG - Chr4:91711026-91711045 None:intergenic 40.0%
CCACATTCATATGGTCATGT+AGG + Chr4:91713622-91713641 MsG0480023959.01.T01:intron 40.0%
CCTACATGACCATATGAATG+TGG - Chr4:91713625-91713644 None:intergenic 40.0%
CTAGAGAGAGAAAGAAGAGA+GGG - Chr4:91710718-91710737 None:intergenic 40.0%
CTTGTATGGTTGACTAAGGA+GGG + Chr4:91713093-91713112 MsG0480023959.01.T01:intron 40.0%
CTTTATCTTCGAAGGTCATG+CGG - Chr4:91711018-91711037 None:intergenic 40.0%
GACATCCTTGTCATTCTGAA+AGG - Chr4:91712442-91712461 None:intergenic 40.0%
GTGTGTTCTTTGGTATCTGA+TGG + Chr4:91712744-91712763 MsG0480023959.01.T01:intron 40.0%
GTTGATTGAGTATGGAATGG+TGG + Chr4:91713446-91713465 MsG0480023959.01.T01:intron 40.0%
TATAGTGTTTGATGGGGGTA+GGG + Chr4:91711835-91711854 MsG0480023959.01.T01:intron 40.0%
TATCTCAGGATGGGAATCAA+GGG + Chr4:91713861-91713880 MsG0480023959.01.T01:CDS 40.0%
TCATATGGTCATGTAGGACA+AGG + Chr4:91713628-91713647 MsG0480023959.01.T01:intron 40.0%
TCATCAATAACCACTACACC+CGG - Chr4:91713761-91713780 None:intergenic 40.0%
TCTAGAGAGAGAAAGAAGAG+AGG - Chr4:91710719-91710738 None:intergenic 40.0%
TCTTGTATGGTTGACTAAGG+AGG + Chr4:91713092-91713111 MsG0480023959.01.T01:intron 40.0%
TGAAGTGAATCCAGAAGCAA+TGG + Chr4:91711212-91711231 MsG0480023959.01.T01:CDS 40.0%
TGGTGTATAGTGTTTGATGG+GGG + Chr4:91711830-91711849 MsG0480023959.01.T01:intron 40.0%
TGTAAGGTTTAGCTAGTCAG+AGG + Chr4:91714148-91714167 MsG0480023959.01.T01:three_prime_UTR 40.0%
TGTTATTCATTCCACAGGAG+CGG - Chr4:91714257-91714276 None:intergenic 40.0%
TTCACTTCAGGTATCACCAA+CGG - Chr4:91711201-91711220 None:intergenic 40.0%
TTGTATCTCCTAGTTGGAAG+TGG + Chr4:91714111-91714130 MsG0480023959.01.T01:three_prime_UTR 40.0%
TTTGACACTTCCAATGGAGT+AGG - Chr4:91713803-91713822 None:intergenic 40.0%
! CTTCGAAGATAAAGAGTACG+TGG + Chr4:91711024-91711043 MsG0480023959.01.T01:five_prime_UTR 40.0%
! GGTATCTGATGGTTTGGATT+GGG + Chr4:91712755-91712774 MsG0480023959.01.T01:intron 40.0%
! GGTTTGGATTGGGATTCAAA+TGG + Chr4:91712765-91712784 MsG0480023959.01.T01:intron 40.0%
! GTAAAGAGTTGGTCCAATTG+CGG + Chr4:91711116-91711135 MsG0480023959.01.T01:five_prime_UTR 40.0%
! TGGTATCTGATGGTTTGGAT+TGG + Chr4:91712754-91712773 MsG0480023959.01.T01:intron 40.0%
!! AAGCCATTGATTGATTCGTG+TGG - Chr4:91710760-91710779 None:intergenic 40.0%
!! AGCCATTGATTGATTCGTGT+GGG - Chr4:91710759-91710778 None:intergenic 40.0%
!! ATGAATGGTGGATGTATACC+AGG + Chr4:91713950-91713969 MsG0480023959.01.T01:intron 40.0%
!! TAAGTTTTGGCGTATACTGC+TGG + Chr4:91713491-91713510 MsG0480023959.01.T01:intron 40.0%
!! TCTTTGCCTCATTTTTGGAG+GGG - Chr4:91712720-91712739 None:intergenic 40.0%
AATTCGAGAGACCCTTGATG+AGG + Chr4:91712526-91712545 MsG0480023959.01.T01:CDS 45.0%
AGAGGACAGAGAGAAACTCT+TGG - Chr4:91710936-91710955 None:intergenic 45.0%
AGCGGATGCATAATTGGGTT+TGG - Chr4:91710841-91710860 None:intergenic 45.0%
ATATCTCTTGCAGTGTCCTG+AGG - Chr4:91713725-91713744 None:intergenic 45.0%
ATGTCAAGGTTTCGCTGAGT+TGG + Chr4:91714062-91714081 MsG0480023959.01.T01:three_prime_UTR 45.0%
CTATCTCAGGATGGGAATCA+AGG + Chr4:91713860-91713879 MsG0480023959.01.T01:CDS 45.0%
CTTGATTCCCATCCTGAGAT+AGG - Chr4:91713862-91713881 None:intergenic 45.0%
GAGCATTTGATGGAGCTGTA+TGG - Chr4:91710972-91710991 None:intergenic 45.0%
GCGGATGCATAATTGGGTTT+GGG - Chr4:91710840-91710859 None:intergenic 45.0%
GCTTTGATGCGAGCATTTGA+TGG - Chr4:91710982-91711001 None:intergenic 45.0%
GGTTGTTAGTACCTATCAGG+CGG + Chr4:91711960-91711979 MsG0480023959.01.T01:CDS 45.0%
GTATAGTGTTTGATGGGGGT+AGG + Chr4:91711834-91711853 MsG0480023959.01.T01:intron 45.0%
GTGGGCATGACATGAAAAAC+AGG - Chr4:91713606-91713625 None:intergenic 45.0%
TATGGTTGACTAAGGAGGGT+TGG + Chr4:91713097-91713116 MsG0480023959.01.T01:intron 45.0%
TGAAACTGGTCAAGGAGACA+AGG + Chr4:91712325-91712344 MsG0480023959.01.T01:intron 45.0%
TGAGCCAGATGTACTGGATT+TGG - Chr4:91712641-91712660 None:intergenic 45.0%
TGCATAATTGGGTTTGGGTC+GGG - Chr4:91710835-91710854 None:intergenic 45.0%
! AATGCTACAGGTGTTGCGTA+TGG + Chr4:91711939-91711958 MsG0480023959.01.T01:intron 45.0%
! AGATAAAGAGTACGTGGTGG+AGG + Chr4:91711030-91711049 MsG0480023959.01.T01:five_prime_UTR 45.0%
! CGAAGATAAAGAGTACGTGG+TGG + Chr4:91711027-91711046 MsG0480023959.01.T01:five_prime_UTR 45.0%
! CGTTTTCTTGGAGGGACATT+CGG - Chr4:91710874-91710893 None:intergenic 45.0%
! GTATGTTGACTAAGGAGGGT+TGG + Chr4:91712923-91712942 MsG0480023959.01.T01:intron 45.0%
!! ATGGTGGATGTATACCAGGT+TGG + Chr4:91713954-91713973 MsG0480023959.01.T01:intron 45.0%
!! CTTTGCCTCATTTTTGGAGG+GGG - Chr4:91712719-91712738 None:intergenic 45.0%
ACCCAATTATGCATCCGCTC+CGG + Chr4:91710842-91710861 MsG0480023959.01.T01:five_prime_UTR 50.0%
ACCTTGGCATGTCGATGAAG+AGG - Chr4:91711321-91711340 None:intergenic 50.0%
AGAGAGAAACTCTTGGCCGA+CGG - Chr4:91710929-91710948 None:intergenic 50.0%
ATAGCAACAACTCGGCGATC+TGG - Chr4:91714032-91714051 None:intergenic 50.0%
ATGGAGCTGTATGGAAGTCG+CGG - Chr4:91710963-91710982 None:intergenic 50.0%
ATGTGGGGACCAAATTCGCA+AGG + Chr4:91713987-91714006 MsG0480023959.01.T01:CDS 50.0%
CAGTTGTGAGCCAGATGTAC+TGG - Chr4:91712647-91712666 None:intergenic 50.0%
CCTTGGCATGTCGATGAAGA+GGG - Chr4:91711320-91711339 None:intergenic 50.0%
CTTGGCATGTCGATGAAGAG+GGG - Chr4:91711319-91711338 None:intergenic 50.0%
CTTTCTGTAATCCGCTCCTG+TGG + Chr4:91714243-91714262 MsG0480023959.01.T01:three_prime_UTR 50.0%
GTATACGAGTACCCGTCATG+CGG + Chr4:91712478-91712497 MsG0480023959.01.T01:CDS 50.0%
GTTCCACGATTCACCGCAAT+TGG - Chr4:91711132-91711151 None:intergenic 50.0%
GTTTGATGGGGGTAGGGTTT+AGG + Chr4:91711841-91711860 MsG0480023959.01.T01:intron 50.0%
TATACGAGTACCCGTCATGC+GGG + Chr4:91712479-91712498 MsG0480023959.01.T01:CDS 50.0%
TATCTTCGAAGGTCATGCGG+CGG - Chr4:91711015-91711034 None:intergenic 50.0%
TATGGAATGGTGGCCCCTAT+AGG + Chr4:91713558-91713577 MsG0480023959.01.T01:CDS 50.0%
TCCCATCCTGAGATAGGTCA+CGG - Chr4:91713856-91713875 None:intergenic 50.0%
TGTGGGGACCAAATTCGCAA+GGG + Chr4:91713988-91714007 MsG0480023959.01.T01:CDS 50.0%
!!! GGTGCGAGAGAAAGGTGTTT+TGG - Chr4:91710802-91710821 None:intergenic 50.0%
AATTATGCATCCGCTCCGGG+CGG + Chr4:91710846-91710865 MsG0480023959.01.T01:five_prime_UTR 55.0%
AGCTGTATGGAAGTCGCGGT+CGG - Chr4:91710959-91710978 None:intergenic 55.0%
AGTACCTATCAGGCGGCTAG+TGG + Chr4:91711967-91711986 MsG0480023959.01.T01:CDS 55.0%
ATTGCTCTCTTCAGCGCAGG+TGG + Chr4:91711085-91711104 MsG0480023959.01.T01:five_prime_UTR 55.0%
CCCAATTATGCATCCGCTCC+GGG + Chr4:91710843-91710862 MsG0480023959.01.T01:five_prime_UTR 55.0%
CCCGGAGCGGATGCATAATT+GGG - Chr4:91710846-91710865 None:intergenic 55.0%
CCCTCTTCATCGACATGCCA+AGG + Chr4:91711317-91711336 MsG0480023959.01.T01:CDS 55.0%
GAAGAATGCTCCGGGTGTAG+TGG + Chr4:91713748-91713767 MsG0480023959.01.T01:CDS 55.0%
GACATTGCTCTCTTCAGCGC+AGG + Chr4:91711082-91711101 MsG0480023959.01.T01:five_prime_UTR 55.0%
GATTCGCCGTGACCTATCTC+AGG + Chr4:91713847-91713866 MsG0480023959.01.T01:CDS 55.0%
GCCGTGACCTATCTCAGGAT+GGG + Chr4:91713852-91713871 MsG0480023959.01.T01:CDS 55.0%
GGTCCAATTGCGGTGAATCG+TGG + Chr4:91711126-91711145 MsG0480023959.01.T01:five_prime_UTR 55.0%
GTGCAGCTCCCTTGCGAATT+TGG - Chr4:91713999-91714018 None:intergenic 55.0%
TGGGTTTGGGTCGGGTAGTT+GGG - Chr4:91710827-91710846 None:intergenic 55.0%
TTGGGTTTGGGTCGGGTAGT+TGG - Chr4:91710828-91710847 None:intergenic 55.0%
TTTGGGTCGGGTAGTTGGGA+GGG - Chr4:91710823-91710842 None:intergenic 55.0%
! AGGACGATGTTGCTGTTGGC+AGG + Chr4:91713825-91713844 MsG0480023959.01.T01:CDS 55.0%
! GGTGGGTGCGTTTTCTTGGA+GGG - Chr4:91710882-91710901 None:intergenic 55.0%
!! TGGTGGGTGCGTTTTCTTGG+AGG - Chr4:91710883-91710902 None:intergenic 55.0%
!!! CGATGGTGGGTGCGTTTTCT+TGG - Chr4:91710886-91710905 None:intergenic 55.0%
AGCTCCACTAGCCGCCTGAT+AGG - Chr4:91711974-91711993 None:intergenic 60.0%
ATTATGCATCCGCTCCGGGC+GGG + Chr4:91710847-91710866 MsG0480023959.01.T01:five_prime_UTR 60.0%
CGCCGTGACCTATCTCAGGA+TGG + Chr4:91713851-91713870 MsG0480023959.01.T01:CDS 60.0%
CTCTGCATGAGCCCGCATGA+CGG - Chr4:91712493-91712512 None:intergenic 60.0%
CTGACGGCGGAGAGTTTCGA+CGG + Chr4:91711055-91711074 MsG0480023959.01.T01:five_prime_UTR 60.0%
GCCCGGAGCGGATGCATAAT+TGG - Chr4:91710847-91710866 None:intergenic 60.0%
GCTTGAGCTGCAGACTCGAG+AGG + Chr4:91712014-91712033 MsG0480023959.01.T01:CDS 60.0%
GTTTGGGTCGGGTAGTTGGG+AGG - Chr4:91710824-91710843 None:intergenic 60.0%
TATCAGGCGGCTAGTGGAGC+TGG + Chr4:91711973-91711992 MsG0480023959.01.T01:CDS 60.0%
TATGGAAGTCGCGGTCGGAG+AGG - Chr4:91710954-91710973 None:intergenic 60.0%
TCTGCATGAGCCCGCATGAC+GGG - Chr4:91712492-91712511 None:intergenic 60.0%
! GTACGTGGTGGAGGAGCTGA+CGG + Chr4:91711039-91711058 MsG0480023959.01.T01:five_prime_UTR 60.0%
! GTTGGGAGGGTGCGAGAGAA+AGG - Chr4:91710810-91710829 None:intergenic 60.0%
!! TGGAGCTGGTGCTGCTGCAA+TGG + Chr4:91711987-91712006 MsG0480023959.01.T01:CDS 60.0%
AAACTCTTGGCCGACGGCGC+CGG - Chr4:91710923-91710942 None:intergenic 65.0%
CATCGCCGTCGTGGAGTCAC+CGG + Chr4:91710901-91710920 MsG0480023959.01.T01:five_prime_UTR 65.0%
GACTCCACGACGGCGATGGT+GGG - Chr4:91710899-91710918 None:intergenic 65.0%
TGACTCCACGACGGCGATGG+TGG - Chr4:91710900-91710919 None:intergenic 65.0%
TTCGAAGGTCATGCGGCGGC+CGG - Chr4:91711011-91711030 None:intergenic 65.0%
! CTCGCATCAAAGCGCTCCGC+CGG + Chr4:91710989-91711008 MsG0480023959.01.T01:five_prime_UTR 65.0%
ACATTCGGACCCGCCCGGAG+CGG - Chr4:91710859-91710878 None:intergenic 70.0%
CGGTGACTCCACGACGGCGA+TGG - Chr4:91710903-91710922 None:intergenic 70.0%
GAGGGACATTCGGACCCGCC+CGG - Chr4:91710864-91710883 None:intergenic 70.0%
! CGTGGTGGAGGAGCTGACGG+CGG + Chr4:91711042-91711061 MsG0480023959.01.T01:five_prime_UTR 70.0%
CGCACCCACCATCGCCGTCG+TGG + Chr4:91710892-91710911 MsG0480023959.01.T01:five_prime_UTR 75.0%
CGTGGAGTCACCGGCGCCGT+CGG + Chr4:91710910-91710929 MsG0480023959.01.T01:five_prime_UTR 75.0%
GAAGGTCATGCGGCGGCCGG+CGG - Chr4:91711008-91711027 None:intergenic 75.0%
!! CGGCGCCGGTGACTCCACGA+CGG - Chr4:91710909-91710928 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 91710666 91714293 91710666 ID=MsG0480023959.01;Name=MsG0480023959.01
Chr4 mRNA 91710666 91714293 91710666 ID=MsG0480023959.01.T01;Parent=MsG0480023959.01;Name=MsG0480023959.01.T01;_AED=0.43;_eAED=0.46;_QI=517|0.5|0.85|1|1|1|7|240|237
Chr4 exon 91710666 91711338 91710666 ID=MsG0480023959.01.T01:exon:7983;Parent=MsG0480023959.01.T01
Chr4 exon 91711949 91712035 91711949 ID=MsG0480023959.01.T01:exon:7984;Parent=MsG0480023959.01.T01
Chr4 exon 91712140 91712184 91712140 ID=MsG0480023959.01.T01:exon:7985;Parent=MsG0480023959.01.T01
Chr4 exon 91712447 91712547 91712447 ID=MsG0480023959.01.T01:exon:7986;Parent=MsG0480023959.01.T01
Chr4 exon 91713527 91713614 91713527 ID=MsG0480023959.01.T01:exon:7987;Parent=MsG0480023959.01.T01
Chr4 exon 91713728 91713882 91713728 ID=MsG0480023959.01.T01:exon:7988;Parent=MsG0480023959.01.T01
Chr4 exon 91713972 91714293 91713972 ID=MsG0480023959.01.T01:exon:7989;Parent=MsG0480023959.01.T01
Chr4 five_prime_UTR 91710666 91711182 91710666 ID=MsG0480023959.01.T01:five_prime_utr;Parent=MsG0480023959.01.T01
Chr4 CDS 91711183 91711338 91711183 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91711949 91712035 91711949 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91712140 91712184 91712140 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91712447 91712547 91712447 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91713527 91713614 91713527 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91713728 91713882 91713728 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 CDS 91713972 91714053 91713972 ID=MsG0480023959.01.T01:cds;Parent=MsG0480023959.01.T01
Chr4 three_prime_UTR 91714054 91714293 91714054 ID=MsG0480023959.01.T01:three_prime_utr;Parent=MsG0480023959.01.T01
Gene Sequence

>MsG0480023959.01.T01

ATGGATGAGAATGTTCCGTTGGTGATACCTGAAGTGAATCCAGAAGCAATGGAGAAGATTAAGTTTGGAATGGGAAAAGGTGCTCTCATTGCTAATCCTAATTGTTCTACTATTATTTGTTTAATGGCTGCTACCCCTCTTCATCGACATGCCAAGGTGTTGCGTATGGTTGTTAGTACCTATCAGGCGGCTAGTGGAGCTGGTGCTGCTGCAATGGAAGAGCTTGAGCTGCAGACTCGAGAGGTATTGGAAGGAAAACCACCAACATGTAAAATATTTAACCGACAGAATGACAAGGATGTCAAAGTAACTGCTACATGTATACGAGTACCCGTCATGCGGGCTCATGCAGAGAGTGTGAATCTTCAATTCGAGAGACCCTTGATGAGTTGTAACATTTCTGTGTATTTCATGTTTGAATATGGAATGGTGGCCCCTATAGGCCTATACAATTTTAAGCAGGGTCCTGTTTTTCATGACACTGCAAGAGATATTTTGAAGAATGCTCCGGGTGTAGTGGTTATTGATGACCGTGAATCCAATAATTTTCCTACTCCATTGGAAGTGTCAAATAAGGACGATGTTGCTGTTGGCAGGATTCGCCGTGACCTATCTCAGGATGGGAATCAAGGGTTGGACATTTTTATATGTGGGGACCAAATTCGCAAGGGAGCTGCACTTAACGCAATCCAGATCGCCGAGTTGTTGCTATGA
Protein sequence

>MsG0480023959.01.T01

MDENVPLVIPEVNPEAMEKIKFGMGKGALIANPNCSTIICLMAATPLHRHAKVLRMVVSTYQAASGAGAAAMEELELQTREVLEGKPPTCKIFNRQNDKDVKVTATCIRVPVMRAHAESVNLQFERPLMSCNISVYFMFEYGMVAPIGLYNFKQGPVFHDTARDILKNAPGVVVIDDRESNNFPTPLEVSNKDDVAVGRIRRDLSQDGNQGLDIFICGDQIRKGAALNAIQIAELLL*