AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024206.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024206.01.T01 MTR_5g007520 91.629 896 25 2 1 850 1 892 0.0 1647
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024206.01.T01 AT5G08550 47.604 939 372 25 1 850 1 908 0.0 723
MsG0580024206.01.T01 AT5G09210 46.226 318 125 6 542 813 252 569 8.08e-78 264

Find 275 sgRNAs with CRISPR-Local

Find 581 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGTTTGGGGCGGTGGTGG+TGG 0.168409 5:+2018325 None:intergenic
CCTTGAGCTTGTCCCAAATT+TGG 0.191837 5:-2013481 MsG0580024206.01.T01:CDS
AATCCCAGCAACACCGATTT+TGG 0.195761 5:-2017503 MsG0580024206.01.T01:CDS
CGGATTATTGATTCCCTATA+TGG 0.218970 5:-2012853 MsG0580024206.01.T01:CDS
AACAGAAGGACCAACAAAAT+TGG 0.225072 5:+2017594 None:intergenic
ACCCTAATTGGTAGTTCTAT+TGG 0.233584 5:+2011267 None:intergenic
GGGGCGGTGGTGGTGGGGTT+TGG 0.243215 5:+2018332 None:intergenic
TGCATCCTGAGCTGCACTTC+TGG 0.255535 5:+2014247 None:intergenic
GTTTGGAAGGGACGGTGGTT+GGG 0.261718 5:+2018448 None:intergenic
TCTGCTAGGGTGGGTGGTGG+TGG 0.268527 5:-2017649 MsG0580024206.01.T01:CDS
ACCCAATAGAACTACCAATT+AGG 0.272272 5:-2011269 MsG0580024206.01.T01:three_prime_UTR
GGGTTTGGGGCGGTGGTGGT+GGG 0.279773 5:+2018326 None:intergenic
GCGACGGAAATTGCGGGATT+TGG 0.288173 5:+2018500 None:intergenic
TTGATTCCCTATATGGCGTT+TGG 0.291655 5:-2012846 MsG0580024206.01.T01:CDS
CCCTAATTGGTAGTTCTATT+GGG 0.292040 5:+2011268 None:intergenic
AGAGGAAGAAGAAGAGGGTT+TGG 0.292473 5:+2018311 None:intergenic
ATAAATACTGTGCGCCAAAC+TGG 0.304474 5:+2011503 None:intergenic
TTCCATCCCTCAACCCTAAT+TGG 0.305972 5:+2011255 None:intergenic
GATGCTGCTGCTACAACATT+TGG 0.312332 5:+2017550 None:intergenic
AAGAGGGTTTGGGGCGGTGG+TGG 0.313005 5:+2018322 None:intergenic
TTTGGAAGGGACGGTGGTTG+GGG 0.318020 5:+2018449 None:intergenic
AGGTTTAGGGGCGGAGGGTT+TGG 0.318804 5:+2018431 None:intergenic
TGGACGAGGGGTTTCGTTAT+CGG 0.321022 5:+2018362 None:intergenic
GGTTTGGAAGGGACGGTGGT+TGG 0.321392 5:+2018447 None:intergenic
ATTATGAAGTTTCCCATTGC+TGG 0.321705 5:-2013431 MsG0580024206.01.T01:CDS
GAGGAAGAAGAAGAGGGTTT+GGG 0.326413 5:+2018312 None:intergenic
CAAGGAGGCATTATGAGTTT+AGG 0.337617 5:-2012224 MsG0580024206.01.T01:exon
ACATAGTCTCTTGGTATGTT+GGG 0.342780 5:-2012183 MsG0580024206.01.T01:three_prime_UTR
ATTTATGTTCTTGAGGTGGC+TGG 0.349544 5:-2011486 MsG0580024206.01.T01:three_prime_UTR
GGTTTGGGGCGGTGGTGGTG+GGG 0.350796 5:+2018327 None:intergenic
GCTTAATTTGTCACTGCAAC+GGG 0.353381 5:-2012010 MsG0580024206.01.T01:intron
GCTGTCACTTGGAAAGATTC+TGG 0.355071 5:-2012353 MsG0580024206.01.T01:CDS
TCCCTATATGGCGTTTGGGC+TGG 0.356224 5:-2012841 MsG0580024206.01.T01:CDS
ACATCCAAAATCGGTGTTGC+TGG 0.356702 5:+2017499 None:intergenic
AAGCTATGCTGGACAATGTT+AGG 0.360268 5:-2017441 MsG0580024206.01.T01:CDS
TATGTTGGGGAGTTCGGCCC+AGG 0.360668 5:-2012169 MsG0580024206.01.T01:three_prime_UTR
AAGAAGAGGGTTTGGGGCGG+TGG 0.362135 5:+2018319 None:intergenic
GAAGGGTCTGCTAGGGTGGG+TGG 0.365943 5:-2017655 MsG0580024206.01.T01:CDS
GGTTTGGAGGAGCGTGGACG+AGG 0.369115 5:+2018348 None:intergenic
GCGGTGGTGGTGGGGTTTGG+AGG 0.372781 5:+2018335 None:intergenic
GTCGGCGAAGCTGAGAAGTT+TGG 0.373308 5:+2018398 None:intergenic
ACCATCCAACGAAATATAAT+CGG 0.375551 5:+2017900 None:intergenic
GAAGGGAGATGGAGAGAAGA+AGG 0.376461 5:-2017797 MsG0580024206.01.T01:CDS
GTGATGAAATTCGGAGCATT+TGG 0.377134 5:-2011416 MsG0580024206.01.T01:three_prime_UTR
GGGTCTGCTAGGGTGGGTGG+TGG 0.377178 5:-2017652 MsG0580024206.01.T01:CDS
AAGCTCACGAAGTGCTTCTA+AGG 0.378762 5:+2018200 None:intergenic
TGAGGAGGAGGAAGGATTGT+GGG 0.383019 5:-2017719 MsG0580024206.01.T01:CDS
CATTTCGTCGTCATTGTTAG+TGG 0.383569 5:+2014340 None:intergenic
AACCGGTTCAGAAGAAGGTT+TGG 0.384290 5:+2018116 None:intergenic
TGATTCCCTATATGGCGTTT+GGG 0.384712 5:-2012845 MsG0580024206.01.T01:CDS
CAAGATCGGTAATCTTCAAA+AGG 0.385604 5:+2016267 None:intergenic
TCTTGGTATGTTGGGGAGTT+CGG 0.386190 5:-2012175 MsG0580024206.01.T01:three_prime_UTR
AACATAGTCTCTTGGTATGT+TGG 0.388105 5:-2012184 MsG0580024206.01.T01:three_prime_UTR
CCCAATAGAACTACCAATTA+GGG 0.390000 5:-2011268 MsG0580024206.01.T01:three_prime_UTR
AAAATTGCAGCATATCGATT+TGG 0.390099 5:-2013036 MsG0580024206.01.T01:CDS
CCAAAACTTAAAACAGGTTA+AGG 0.391021 5:+2011215 None:intergenic
TGCAATGTTTGGTGGGAAGA+AGG 0.391451 5:-2017815 MsG0580024206.01.T01:CDS
ATATCAGTCACAGCGAGATT+TGG 0.392471 5:-2014003 MsG0580024206.01.T01:CDS
TGTTGAGCAACTTGCACAAC+AGG 0.392622 5:+2017619 None:intergenic
AAACCCTTTAAAACAATAAC+CGG 0.393611 5:+2018099 None:intergenic
CATCGGCGAATACCAGCATT+GGG 0.397412 5:-2017531 MsG0580024206.01.T01:CDS
TTAAAGCAGCTAAGGCTAAG+AGG 0.402087 5:-2017954 MsG0580024206.01.T01:CDS
AGCCAGCTTCAAATCCTTGC+AGG 0.402276 5:+2011457 None:intergenic
CTCCTTGAGATGGAAGGTTC+TGG 0.403287 5:+2012240 None:intergenic
TCGGCGAAGCTGAGAAGTTT+GGG 0.403843 5:+2018399 None:intergenic
ATCTCAGCTTGTTGAGATAT+AGG 0.404786 5:+2017472 None:intergenic
ACCGGTTCAGAAGAAGGTTT+GGG 0.405371 5:+2018117 None:intergenic
GGCTTTGTGTATGAACTTGC+TGG 0.406116 5:-2012063 MsG0580024206.01.T01:three_prime_UTR
GCCAGCCCAAACGCCATATA+GGG 0.407016 5:+2012840 None:intergenic
ATGCTGCTGCTACAACATTT+GGG 0.408332 5:+2017551 None:intergenic
CAAACAGAATTAGACACATT+TGG 0.408487 5:+2011383 None:intergenic
ACCCAAACCTTCTTCTGAAC+CGG 0.411495 5:-2018118 MsG0580024206.01.T01:CDS
TACTGAGAAATATTTGCCTT+TGG 0.413069 5:-2012999 MsG0580024206.01.T01:CDS
CCCGATTATATTTCGTTGGA+TGG 0.415527 5:-2017901 MsG0580024206.01.T01:CDS
TGTCCCAAATTTGGTGGAAA+AGG 0.417465 5:-2013472 MsG0580024206.01.T01:CDS
AGTCAGATTCTGAAGAAAAC+GGG 0.419474 5:-2018050 MsG0580024206.01.T01:CDS
ATGAGGAGGAGGAAGGATTG+TGG 0.420510 5:-2017720 MsG0580024206.01.T01:CDS
ATATATTTGAGATATAATTT+CGG 0.423368 5:+2016195 None:intergenic
CCACCAGAGGTTGCAATTTG+CGG 0.423914 5:+2012383 None:intergenic
TTTAAAGGGTTTGCTTAAAC+CGG 0.427875 5:-2018088 MsG0580024206.01.T01:CDS
GGCTGCCAGAAGTGCAGCTC+AGG 0.428325 5:-2014252 MsG0580024206.01.T01:CDS
TGTGAATTTGTGATGAAATT+CGG 0.429574 5:-2011425 MsG0580024206.01.T01:three_prime_UTR
GGATGAAGGGTCTGCTAGGG+TGG 0.430831 5:-2017659 MsG0580024206.01.T01:CDS
GAAGGTTCTGGCCATGGTCC+TGG 0.431263 5:+2012252 None:intergenic
TTTGGAGGAGCGTGGACGAG+GGG 0.432677 5:+2018350 None:intergenic
GGCCAGCCCAAACGCCATAT+AGG 0.433336 5:+2012839 None:intergenic
CCAGTGCAGTTAGATGAGTT+TGG 0.433732 5:-2014194 MsG0580024206.01.T01:CDS
GGTTTGGGTTCAGATGAAAT+AGG 0.434359 5:+2018132 None:intergenic
GAAGAAGAGCAGTTTAAGAA+AGG 0.440241 5:-2017697 MsG0580024206.01.T01:CDS
TGATGAGGAGGATGAGGAGG+AGG 0.440482 5:-2017731 MsG0580024206.01.T01:CDS
CGATCTTGAAAACTCATTAG+TGG 0.441002 5:-2016252 MsG0580024206.01.T01:CDS
TTCATACACAAAGCCGACTC+TGG 0.441923 5:+2012071 None:intergenic
ACAATAACCGGTTCAGAAGA+AGG 0.442201 5:+2018111 None:intergenic
GGGGTTGAGTGACGAGGAAC+CGG 0.445232 5:-2017854 MsG0580024206.01.T01:CDS
AAGCGAGATTTGCTTCTGTT+GGG 0.445346 5:-2018020 MsG0580024206.01.T01:CDS
ACGGAAATTGCGGGATTTGG+CGG 0.447191 5:+2018503 None:intergenic
TTGTGAGAGGAAGAAGAAGA+GGG 0.448221 5:+2018306 None:intergenic
TTGGTGAAGAGATGGGATGA+AGG 0.452571 5:-2017673 MsG0580024206.01.T01:CDS
CACTAACAATGACGACGAAA+TGG 0.459420 5:-2014339 MsG0580024206.01.T01:CDS
AGAAAGGATTGGTGAAGAGA+TGG 0.459594 5:-2017681 MsG0580024206.01.T01:CDS
GAAACTTCATAATGGAGAAT+AGG 0.460410 5:+2013441 None:intergenic
AGAGGCCGGATTGCAATGTT+TGG 0.461538 5:-2017826 MsG0580024206.01.T01:CDS
CCTTCTGTTGCAAATGTGTA+TGG 0.461698 5:-2017580 MsG0580024206.01.T01:CDS
ATGTGATATGTAGCCCAGTT+TGG 0.462168 5:-2011517 MsG0580024206.01.T01:three_prime_UTR
GCAATGTTTGGTGGGAAGAA+GGG 0.462368 5:-2017814 MsG0580024206.01.T01:CDS
GCGGGATTTGGCGGAGGACA+TGG 0.464512 5:+2018512 None:intergenic
AATTGGTAGTTCTATTGGGT+TGG 0.466748 5:+2011272 None:intergenic
GAGTCAGATTCTGAAGAAAA+CGG 0.467543 5:-2018051 MsG0580024206.01.T01:CDS
AACTTAAAACAGGTTAAGGT+TGG 0.468518 5:+2011219 None:intergenic
AGAGCAGTTTAAGAAAGGAT+TGG 0.469018 5:-2017692 MsG0580024206.01.T01:CDS
GGTACGGCGACGGAAATTGC+GGG 0.469208 5:+2018494 None:intergenic
GAGATTTAAATCTTGAGAAA+CGG 0.470006 5:-2014169 MsG0580024206.01.T01:CDS
ACAGAAGGACCAACAAAATT+GGG 0.470471 5:+2017595 None:intergenic
GTTCTATTGGGTTGGTGATG+AGG 0.470565 5:+2011280 None:intergenic
GAACTACCAATTAGGGTTGA+GGG 0.473314 5:-2011261 MsG0580024206.01.T01:three_prime_UTR
GGAGGGTTTGGAAGGGACGG+TGG 0.473626 5:+2018443 None:intergenic
GGTGGTTGGGGTGTCGTCGT+CGG 0.474388 5:+2018461 None:intergenic
TGCCTGCAAGGATTTGAAGC+TGG 0.475356 5:-2011459 MsG0580024206.01.T01:three_prime_UTR
TTTGTGAGAGGAAGAAGAAG+AGG 0.475960 5:+2018305 None:intergenic
AGCAATGGGAAACTTCATAA+TGG 0.476899 5:+2013433 None:intergenic
GAGAAATATTTGCCTTTGGA+AGG 0.477067 5:-2012995 MsG0580024206.01.T01:CDS
GGCGGTGGTGAAAGGTTGTT+TGG 0.477394 5:+2018533 None:intergenic
ATCGGCGTCGATTTCGTCGT+CGG 0.477526 5:+2018380 None:intergenic
AGGAAGAAGAAGAGGGTTTG+GGG 0.478043 5:+2018313 None:intergenic
CAGCCGCAAATTGCAACCTC+TGG 0.478227 5:-2012386 MsG0580024206.01.T01:CDS
TTTATGATCATCTATTTCCA+TGG 0.479341 5:+2014073 None:intergenic
CACACACGAGGGAAACGAAA+GGG 0.479652 5:-2018652 MsG0580024206.01.T01:five_prime_UTR
TGAGAGTGATAGTGAGAGCC+AGG 0.480303 5:-2014027 MsG0580024206.01.T01:CDS
GCATCGGCGAATACCAGCAT+TGG 0.480338 5:-2017532 MsG0580024206.01.T01:CDS
TGGGCTGGCCCAAGTGTCAC+TGG 0.480457 5:-2012826 MsG0580024206.01.T01:CDS
GAAGCGAGATTTGCTTCTGT+TGG 0.481047 5:-2018021 MsG0580024206.01.T01:CDS
ACTAAGCATGTCCCAGCAAT+GGG 0.487780 5:+2013419 None:intergenic
TGAGCTTGTCCCAAATTTGG+TGG 0.487990 5:-2013478 MsG0580024206.01.T01:CDS
AAATCATGATACTCCTGATA+AGG 0.489257 5:+2012107 None:intergenic
TTTCGTTAAACATAGTCTCT+TGG 0.490694 5:-2012192 MsG0580024206.01.T01:three_prime_UTR
GTGGCTTATGTGCTGTCACT+TGG 0.490791 5:-2012364 MsG0580024206.01.T01:CDS
TAAACCGGTGACGTCTGAAC+CGG 0.492962 5:-2018073 MsG0580024206.01.T01:CDS
GAGGAGGATGAGGAGGAGGA+AGG 0.493357 5:-2017727 MsG0580024206.01.T01:CDS
ATACTCCTGATAAGGTCAAA+AGG 0.494531 5:+2012115 None:intergenic
TTTATGTTCTTGAGGTGGCT+GGG 0.497059 5:-2011485 MsG0580024206.01.T01:three_prime_UTR
GAGGACATGGCGGTGGTGAA+AGG 0.497940 5:+2018525 None:intergenic
TTATGAAGTTTCCCATTGCT+GGG 0.498610 5:-2013430 MsG0580024206.01.T01:CDS
GAAAGGATTGGTGAAGAGAT+GGG 0.499613 5:-2017680 MsG0580024206.01.T01:CDS
GGACAATGTTAGGAGGCTTA+AGG 0.503444 5:-2017431 MsG0580024206.01.T01:intron
CCAAACTCATCTAACTGCAC+TGG 0.505277 5:+2014194 None:intergenic
CTCATAATGCCTCCTTGAGA+TGG 0.505408 5:+2012230 None:intergenic
ATCCCTGGTCAAAACAAGAA+TGG 0.506312 5:-2013925 MsG0580024206.01.T01:CDS
TGCTTAATTTGTCACTGCAA+CGG 0.507302 5:-2012011 MsG0580024206.01.T01:three_prime_UTR
ATAGGACGAGAAGCGGTTGT+AGG 0.507409 5:+2018150 None:intergenic
CCGCAAATTGCAACCTCTGG+TGG 0.509699 5:-2012383 MsG0580024206.01.T01:CDS
TTGTGTTGTAGGTCCCTACA+TGG 0.509980 5:-2013095 MsG0580024206.01.T01:intron
ATAGGAATGACATCCAAAAT+CGG 0.510391 5:+2017490 None:intergenic
ACAGCGAGATTTGGTGCTGC+AGG 0.513777 5:-2013994 MsG0580024206.01.T01:CDS
AGGCTAAGAGGGAGAGGATG+CGG 0.514809 5:-2017942 MsG0580024206.01.T01:CDS
AGGGAGAGGATGCGGAAGGC+CGG 0.515080 5:-2017934 MsG0580024206.01.T01:CDS
GACTAAGCATGTCCCAGCAA+TGG 0.515288 5:+2013418 None:intergenic
GGCCGGATTGCAATGTTTGG+TGG 0.516041 5:-2017823 MsG0580024206.01.T01:CDS
TAAAGCAGCTAAGGCTAAGA+GGG 0.516937 5:-2017953 MsG0580024206.01.T01:CDS
TCAAAACAAGAATGGAAGAA+TGG 0.517820 5:-2013917 MsG0580024206.01.T01:CDS
GAGATGGAAGGTTCTGGCCA+TGG 0.518698 5:+2012246 None:intergenic
AGAACTACCAATTAGGGTTG+AGG 0.518854 5:-2011262 MsG0580024206.01.T01:three_prime_UTR
AGTAATCATGGCGCTGCGGA+GGG 0.520243 5:-2017874 MsG0580024206.01.T01:CDS
AAGGGAGATGGAGAGAAGAA+GGG 0.521292 5:-2017796 MsG0580024206.01.T01:CDS
TTTGGTGGGAAGAAGGGAGA+TGG 0.521536 5:-2017808 MsG0580024206.01.T01:CDS
TCTGGAGAGAAGAAATGTAC+AGG 0.522631 5:-2012335 MsG0580024206.01.T01:CDS
CATCCAAAATCGGTGTTGCT+GGG 0.523149 5:+2017500 None:intergenic
AGTGACAAATTAAGCAATGA+AGG 0.524272 5:+2012018 None:intergenic
GACGAGGAACCGGAGTATAG+AGG 0.525115 5:-2017844 MsG0580024206.01.T01:CDS
TTGGATGGTGGAAGTAATCA+TGG 0.528537 5:-2017886 MsG0580024206.01.T01:CDS
AAGATCGGTAATCTTCAAAA+GGG 0.529227 5:+2016268 None:intergenic
TCCCACCAAACATTGCAATC+CGG 0.529874 5:+2017821 None:intergenic
GGCGGAGGGTTTGGAAGGGA+CGG 0.532176 5:+2018440 None:intergenic
TTTGGCGGAGGACATGGCGG+TGG 0.532685 5:+2018518 None:intergenic
GTTTGGAGGAGCGTGGACGA+GGG 0.533078 5:+2018349 None:intergenic
TAAATACTGTGCGCCAAACT+GGG 0.533792 5:+2011504 None:intergenic
TGATGCTGTTGCTAAACTTA+CGG 0.534171 5:-2013286 MsG0580024206.01.T01:intron
GCACAGTATTTATGTTCTTG+AGG 0.534703 5:-2011493 MsG0580024206.01.T01:three_prime_UTR
ATAATCGGGTGCAGCAGCAC+CGG 0.538039 5:+2017915 None:intergenic
TGCACCCGATTATATTTCGT+TGG 0.539945 5:-2017905 MsG0580024206.01.T01:CDS
CTCGCTGTGACTGATATGCC+TGG 0.540448 5:+2014009 None:intergenic
AAGTAATCATGGCGCTGCGG+AGG 0.541514 5:-2017875 MsG0580024206.01.T01:CDS
CAGCTAAGGCTAAGAGGGAG+AGG 0.542351 5:-2017948 MsG0580024206.01.T01:CDS
GTGGCTGGGATTTGCCTGCA+AGG 0.542832 5:-2011471 MsG0580024206.01.T01:three_prime_UTR
GATGAAGGGTCTGCTAGGGT+GGG 0.543214 5:-2017658 MsG0580024206.01.T01:CDS
GGTTGATGAGGAGGATGAGG+AGG 0.546256 5:-2017734 MsG0580024206.01.T01:CDS
GGTGGTTGATGAGGAGGATG+AGG 0.546740 5:-2017737 MsG0580024206.01.T01:CDS
GATGGGATGAAGGGTCTGCT+AGG 0.550102 5:-2017663 MsG0580024206.01.T01:CDS
GCATCTTTCACTCCCAGAGT+CGG 0.550538 5:-2012084 MsG0580024206.01.T01:three_prime_UTR
ATGGGATGAAGGGTCTGCTA+GGG 0.550731 5:-2017662 MsG0580024206.01.T01:CDS
TGGTGAAGAGATGGGATGAA+GGG 0.552258 5:-2017672 MsG0580024206.01.T01:CDS
CGGTACGGCGACGGAAATTG+CGG 0.552419 5:+2018493 None:intergenic
TGTCGATGTGGTGGTTGATG+AGG 0.554191 5:-2017746 MsG0580024206.01.T01:CDS
CACTTGAGAAGGCTAACCCT+GGG 0.555297 5:+2012152 None:intergenic
AAGCGGTTGTAGGAGTGACT+AGG 0.555541 5:+2018160 None:intergenic
AGAGGATATTAAAGCAGCTA+AGG 0.556189 5:-2017962 MsG0580024206.01.T01:CDS
GCCGGATTGCAATGTTTGGT+GGG 0.557759 5:-2017822 MsG0580024206.01.T01:CDS
GAAATTGCGGGATTTGGCGG+AGG 0.560318 5:+2018506 None:intergenic
GGCCAGAACCTTCCATCTCA+AGG 0.561957 5:-2012242 MsG0580024206.01.T01:CDS
GTACTAGTGGACTCCATGTA+GGG 0.564438 5:+2013082 None:intergenic
CCAAATTTGGGACAAGCTCA+AGG 0.564443 5:+2013481 None:intergenic
GATTATATTTCGTTGGATGG+TGG 0.564911 5:-2017898 MsG0580024206.01.T01:CDS
GGAACATATGAAACTAATTG+AGG 0.569143 5:-2012042 MsG0580024206.01.T01:three_prime_UTR
AAATGTTGTAGCAGCAGCAT+CGG 0.570378 5:-2017548 MsG0580024206.01.T01:CDS
AGTACTAGTGGACTCCATGT+AGG 0.570562 5:+2013081 None:intergenic
CAGTATTTATGTTCTTGAGG+TGG 0.572317 5:-2011490 MsG0580024206.01.T01:three_prime_UTR
GCTTGAGGTTGAACATTGGA+AGG 0.572614 5:+2018234 None:intergenic
TCCAATGTTCAACCTCAAGC+TGG 0.573810 5:-2018231 MsG0580024206.01.T01:CDS
CCATCCAACGAAATATAATC+GGG 0.574191 5:+2017901 None:intergenic
TCAATGAATATGATCATGCC+AGG 0.574695 5:-2012270 MsG0580024206.01.T01:CDS
TCATACACAAAGCCGACTCT+GGG 0.575616 5:+2012072 None:intergenic
ATGTTGGGGAGTTCGGCCCA+GGG 0.576619 5:-2012168 MsG0580024206.01.T01:three_prime_UTR
GGATGAGAGGTTTGTCGATG+TGG 0.578395 5:-2017758 MsG0580024206.01.T01:CDS
TTAGGGGCGGAGGGTTTGGA+AGG 0.578669 5:+2018435 None:intergenic
CGATGTGGTGGTTGATGAGG+AGG 0.579918 5:-2017743 MsG0580024206.01.T01:CDS
AATAGATGATCATAAAGTAG+AGG 0.580527 5:-2014066 MsG0580024206.01.T01:CDS
CAATGACGACGAAATGGTTG+AGG 0.582119 5:-2014333 MsG0580024206.01.T01:CDS
TGGTGGGGTTTGGAGGAGCG+TGG 0.584019 5:+2018342 None:intergenic
TAGGGGCGGAGGGTTTGGAA+GGG 0.584957 5:+2018436 None:intergenic
CTGAGGCTCGTCAACGCAGG+AGG 0.585117 5:-2014127 MsG0580024206.01.T01:CDS
GGAATATAGTCAATTATCCC+TGG 0.587507 5:-2013940 MsG0580024206.01.T01:CDS
CATAGTCTCTTGGTATGTTG+GGG 0.588680 5:-2012182 MsG0580024206.01.T01:three_prime_UTR
CCATACACATTTGCAACAGA+AGG 0.589975 5:+2017580 None:intergenic
TAATGCCTCCTTGAGATGGA+AGG 0.592091 5:+2012234 None:intergenic
TGGCTGAGGCTCGTCAACGC+AGG 0.592093 5:-2014130 MsG0580024206.01.T01:CDS
ACGGAAGAAAATGAAAGTGA+TGG 0.593973 5:-2014150 MsG0580024206.01.T01:CDS
AGTTAGTGTCGGTACGGCGA+CGG 0.595495 5:+2018484 None:intergenic
GGAACAGCAGCTAGTACTAG+TGG 0.596202 5:+2013069 None:intergenic
ATAGATGATCATAAAGTAGA+GGG 0.596739 5:-2014065 MsG0580024206.01.T01:CDS
CGAAACTAGCAGATCTGCAA+GGG 0.598859 5:+2013326 None:intergenic
TCTGAAGTACTCACTTGAGA+AGG 0.598945 5:+2012141 None:intergenic
GCTTTAATATCCTCTTCACC+AGG 0.602215 5:+2017970 None:intergenic
TCGAAACTAGCAGATCTGCA+AGG 0.605083 5:+2013325 None:intergenic
TGGCATGATCATATTCATTG+AGG 0.605222 5:+2012272 None:intergenic
TACCAATTAGGGTTGAGGGA+TGG 0.607290 5:-2011257 MsG0580024206.01.T01:three_prime_UTR
TCTGATATGCTTCTAAAGTG+AGG 0.607880 5:+2012907 None:intergenic
CACAAATGACAGGAATCACA+TGG 0.609144 5:-2016338 MsG0580024206.01.T01:intron
AATTAGGGTTGAGGGATGGA+AGG 0.609579 5:-2011253 MsG0580024206.01.T01:three_prime_UTR
CGTCGGAGTTAGTGTCGGTA+CGG 0.610527 5:+2018478 None:intergenic
ACCAGCTTGAGGTTGAACAT+TGG 0.610869 5:+2018230 None:intergenic
GTAATCATGGCGCTGCGGAG+GGG 0.610897 5:-2017873 MsG0580024206.01.T01:CDS
TCACTTGAGAAGGCTAACCC+TGG 0.612383 5:+2012151 None:intergenic
AGGAACCGGAGTATAGAGGC+CGG 0.612699 5:-2017840 MsG0580024206.01.T01:CDS
AATTCGGAGCATTTGGTACG+AGG 0.613315 5:-2011409 MsG0580024206.01.T01:three_prime_UTR
TCGGCGAATACCAGCATTGG+GGG 0.614034 5:-2017529 MsG0580024206.01.T01:CDS
TGCGGAGGGGTTGAGTGACG+AGG 0.618970 5:-2017860 MsG0580024206.01.T01:CDS
AAGAAGAAGAGGGTTTGGGG+CGG 0.619600 5:+2018316 None:intergenic
AGCGGTTGTAGGAGTGACTA+GGG 0.620321 5:+2018161 None:intergenic
GTCGTCGTCGGAGTTAGTGT+CGG 0.620489 5:+2018473 None:intergenic
CTATGCTGGACAATGTTAGG+AGG 0.621020 5:-2017438 MsG0580024206.01.T01:CDS
ATCGGTAATCTTCAAAAGGG+AGG 0.623464 5:+2016271 None:intergenic
GCAATCCGGCCTCTATACTC+CGG 0.626207 5:+2017835 None:intergenic
ACGAAGTGCTTCTAAGGTGT+AGG 0.628934 5:+2018206 None:intergenic
GACTCCGGTTCAGACGTCAC+CGG 0.630107 5:+2018069 None:intergenic
ACACACACGAGGGAAACGAA+AGG 0.630493 5:-2018653 MsG0580024206.01.T01:five_prime_UTR
TAAGAGGGAGAGGATGCGGA+AGG 0.631007 5:-2017938 MsG0580024206.01.T01:CDS
AAGGTGTAGGTACCAGCTTG+AGG 0.635635 5:+2018219 None:intergenic
ACACACGAGGGAAACGAAAG+GGG 0.635967 5:-2018651 MsG0580024206.01.T01:five_prime_UTR
GAAAATGAAAGTGATGGCTG+AGG 0.637984 5:-2014144 MsG0580024206.01.T01:CDS
GGTTGAACATTGGAAGGTGA+AGG 0.640065 5:+2018240 None:intergenic
TTGCAAATATGTCCTTCCAA+AGG 0.640067 5:+2012983 None:intergenic
AGATGAAATAGGACGAGAAG+CGG 0.643147 5:+2018143 None:intergenic
GCGAAGCTGAGAAGTTTGGG+TGG 0.643668 5:+2018402 None:intergenic
ACATTGGAAGGTGAAGGTGA+AGG 0.648175 5:+2018246 None:intergenic
AGCATCACTGAAAATCTCAT+CGG 0.649221 5:+2013968 None:intergenic
TGAGAGGTTTGTCGATGTGG+TGG 0.649832 5:-2017755 MsG0580024206.01.T01:CDS
ATATGATCATGCCAGGACCA+TGG 0.660979 5:-2012263 MsG0580024206.01.T01:CDS
ATCGGCGAATACCAGCATTG+GGG 0.671713 5:-2017530 MsG0580024206.01.T01:CDS
ATGCAATAACAAGAACAGAA+CGG 0.677815 5:-2012873 MsG0580024206.01.T01:CDS
GGATTTGGCGGAGGACATGG+CGG 0.680780 5:+2018515 None:intergenic
GTCAGATTCTGAAGAAAACG+GGG 0.684867 5:-2018049 MsG0580024206.01.T01:CDS
CAGGAAAGGTGACAACGTGG+AGG 0.699343 5:-2014273 MsG0580024206.01.T01:CDS
TGGAAGTAATCATGGCGCTG+CGG 0.699526 5:-2017878 MsG0580024206.01.T01:CDS
GACAGCACATAAGCCACCAG+AGG 0.711177 5:+2012370 None:intergenic
AAGCAGGAAAGGTGACAACG+TGG 0.725920 5:-2014276 MsG0580024206.01.T01:CDS
CAGAACCTTCCATCTCAAGG+AGG 0.749650 5:-2012239 MsG0580024206.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATTGATTGTAT+TGG - Chr5:2015247-2015266 MsG0580024206.01.T01:intron 10.0%
!! TGATTTATATACTATATATT+GGG - Chr5:2016698-2016717 MsG0580024206.01.T01:intron 10.0%
!!! ATATATTTGAGATATAATTT+CGG + Chr5:2013685-2013704 None:intergenic 10.0%
!! AAAAATGGAAAATATAGAAT+AGG + Chr5:2016130-2016149 None:intergenic 15.0%
!! AATTATACAATGATGTAAAA+AGG - Chr5:2014824-2014843 MsG0580024206.01.T01:intron 15.0%
!! ATTAATCATATAAGAATTCA+AGG - Chr5:2014268-2014287 MsG0580024206.01.T01:CDS 15.0%
!! CTTCTTAATTAAATAAAAGT+GGG - Chr5:2013764-2013783 MsG0580024206.01.T01:intron 15.0%
!! GATAATTAGATATTGATATA+GGG - Chr5:2012785-2012804 MsG0580024206.01.T01:intron 15.0%
!! GTGATTTATATACTATATAT+TGG - Chr5:2016697-2016716 MsG0580024206.01.T01:intron 15.0%
!! TAATACAACAAATAATTTCA+TGG - Chr5:2015194-2015213 MsG0580024206.01.T01:intron 15.0%
!! TGATAATTAGATATTGATAT+AGG - Chr5:2012784-2012803 MsG0580024206.01.T01:intron 15.0%
!! TGTAAAATCTCATAATAATA+CGG - Chr5:2018167-2018186 MsG0580024206.01.T01:CDS 15.0%
!!! TATAAATTGTTATTCACTTA+TGG - Chr5:2016325-2016344 MsG0580024206.01.T01:CDS 15.0%
!! ATCAATATCTAATTATCAAC+AGG + Chr5:2012782-2012801 None:intergenic 20.0%
!! CACTTATATGATACATTAAA+TGG + Chr5:2012656-2012675 None:intergenic 20.0%
!! CCTTCTTAATTAAATAAAAG+TGG - Chr5:2013763-2013782 MsG0580024206.01.T01:intron 20.0%
!! GTAAAATCTCATAATAATAC+GGG - Chr5:2018168-2018187 MsG0580024206.01.T01:CDS 20.0%
!! TAAAATCTCATAATAATACG+GGG - Chr5:2018169-2018188 MsG0580024206.01.T01:CDS 20.0%
!! TACTTCATTAGTAAAATAGA+AGG + Chr5:2013876-2013895 None:intergenic 20.0%
!! TATATGCTCATATAACTATT+TGG + Chr5:2014969-2014988 None:intergenic 20.0%
!! TCAAGAAAGAATACTAAAAA+TGG + Chr5:2016145-2016164 None:intergenic 20.0%
!! TGATTTAATATGTAGTGTTA+TGG - Chr5:2014775-2014794 MsG0580024206.01.T01:intron 20.0%
!! TGTTGTATATGATTATGAAT+AGG - Chr5:2013279-2013298 MsG0580024206.01.T01:intron 20.0%
!! TTTAATTAAGAAGGAAGATA+AGG + Chr5:2013757-2013776 None:intergenic 20.0%
!! TTTATTTGTCTCCAATAAAT+AGG + Chr5:2015164-2015183 None:intergenic 20.0%
!!! AAATTTTTGATGTGCTTATA+AGG - Chr5:2014153-2014172 MsG0580024206.01.T01:CDS 20.0%
!!! ATTCTTTCTTGAATCTTTTT+AGG - Chr5:2016153-2016172 MsG0580024206.01.T01:intron 20.0%
!!! ATTGTGGATTTTTCTATTTT+AGG - Chr5:2014616-2014635 MsG0580024206.01.T01:intron 20.0%
!!! ATTTTAAGTGTTGGATATTT+AGG - Chr5:2014666-2014685 MsG0580024206.01.T01:intron 20.0%
!!! CCACTTTTATTTAATTAAGA+AGG + Chr5:2013766-2013785 None:intergenic 20.0%
!!! TAGATTTTCAAGATATGAAA+TGG - Chr5:2016098-2016117 MsG0580024206.01.T01:intron 20.0%
!!! TATTTGTTTTGTTCATTTTC+TGG - Chr5:2016663-2016682 MsG0580024206.01.T01:intron 20.0%
!!! TCTTTTATCATATGTAATCA+AGG + Chr5:2012987-2013006 None:intergenic 20.0%
!!! TTATTTTTCAGATCCAAATA+TGG - Chr5:2013383-2013402 MsG0580024206.01.T01:CDS 20.0%
!!! TTCTTTCTTGAATCTTTTTA+GGG - Chr5:2016154-2016173 MsG0580024206.01.T01:intron 20.0%
!!! TTTACAAAATTTGTTCTCTA+GGG + Chr5:2017999-2018018 None:intergenic 20.0%
!!! TTTTACAAAATTTGTTCTCT+AGG + Chr5:2018000-2018019 None:intergenic 20.0%
!!! TTTTTTTTTGTCATATTTGC+TGG + Chr5:2014528-2014547 None:intergenic 20.0%
! AAAACTCTACCATAAATTCA+AGG + Chr5:2016249-2016268 None:intergenic 25.0%
! AAAATAGATCAAAGGACTTA+AGG + Chr5:2013964-2013983 None:intergenic 25.0%
! AAAATCTCATAATAATACGG+GGG - Chr5:2018170-2018189 MsG0580024206.01.T01:CDS 25.0%
! AAACTATGTTTGTGCTTAAA+TGG - Chr5:2013228-2013247 MsG0580024206.01.T01:intron 25.0%
! AAATAAACACTTACGAGTTT+AGG - Chr5:2014057-2014076 MsG0580024206.01.T01:CDS 25.0%
! AACTATGTTTGTGCTTAAAT+GGG - Chr5:2013229-2013248 MsG0580024206.01.T01:intron 25.0%
! AATACTAGTGATATTATGAC+AGG + Chr5:2013829-2013848 None:intergenic 25.0%
! AATAGATGATCATAAAGTAG+AGG - Chr5:2015811-2015830 MsG0580024206.01.T01:intron 25.0%
! ATAAAAAGCAACACATAGAA+AGG + Chr5:2015078-2015097 None:intergenic 25.0%
! ATACTAGTGATATTATGACA+GGG + Chr5:2013828-2013847 None:intergenic 25.0%
! ATAGATGATCATAAAGTAGA+GGG - Chr5:2015812-2015831 MsG0580024206.01.T01:intron 25.0%
! ATGATTATGAATAGGTAAAC+AGG - Chr5:2013287-2013306 MsG0580024206.01.T01:CDS 25.0%
! ATGTATCATATAAGTGACTT+TGG - Chr5:2012660-2012679 MsG0580024206.01.T01:intron 25.0%
! ATTCTCACATAAACCATATT+TGG + Chr5:2013399-2013418 None:intergenic 25.0%
! ATTTAACCAATTTGTAGCAA+TGG - Chr5:2018197-2018216 MsG0580024206.01.T01:CDS 25.0%
! ATTTACCTTCCTTGAATTTA+TGG - Chr5:2016237-2016256 MsG0580024206.01.T01:CDS 25.0%
! CATCAAAAGAATCATAATTG+TGG - Chr5:2012683-2012702 MsG0580024206.01.T01:intron 25.0%
! GAGATTTAAATCTTGAGAAA+CGG - Chr5:2015708-2015727 MsG0580024206.01.T01:intron 25.0%
! GTTAACAGAAAATAGATCAA+AGG + Chr5:2013972-2013991 None:intergenic 25.0%
! TAAATAATCACAGTAGAGAA+AGG + Chr5:2018027-2018046 None:intergenic 25.0%
! TAGAATACCAGAAATAACTT+GGG - Chr5:2017200-2017219 MsG0580024206.01.T01:intron 25.0%
! TCTTAAAGCAACACATAAAA+AGG - Chr5:2015283-2015302 MsG0580024206.01.T01:intron 25.0%
! TGATGGTTAAAAGAAAAGAA+TGG - Chr5:2013158-2013177 MsG0580024206.01.T01:intron 25.0%
! TGTATGCACTACATATAATA+AGG + Chr5:2017390-2017409 None:intergenic 25.0%
! TGTGAATTTGTGATGAAATT+CGG - Chr5:2018452-2018471 MsG0580024206.01.T01:CDS 25.0%
! TTAACTAGTAAAGCAGTATA+TGG - Chr5:2016640-2016659 MsG0580024206.01.T01:intron 25.0%
! TTAGAATACCAGAAATAACT+TGG - Chr5:2017199-2017218 MsG0580024206.01.T01:intron 25.0%
! TTATATTAACACACATGAAG+AGG + Chr5:2017425-2017444 None:intergenic 25.0%
! TTTAGTCTATGTATGTATTG+TGG - Chr5:2014600-2014619 MsG0580024206.01.T01:intron 25.0%
! TTTATGATCATCTATTTCCA+TGG + Chr5:2015807-2015826 None:intergenic 25.0%
!! AAATATATGCGACTTTTTAC+AGG - Chr5:2013697-2013716 MsG0580024206.01.T01:intron 25.0%
!! AATCATAATTGTGGTTTTCT+TGG - Chr5:2012692-2012711 MsG0580024206.01.T01:intron 25.0%
!! CTTCGATAAGTAATTTTGTA+CGG + Chr5:2013796-2013815 None:intergenic 25.0%
!! GTTTATTCTAGGAATTAAGA+TGG + Chr5:2014446-2014465 None:intergenic 25.0%
!! TCTTTCTTGAATCTTTTTAG+GGG - Chr5:2016155-2016174 MsG0580024206.01.T01:intron 25.0%
!! TGTCAAAGTTTTTGTGAAAT+TGG - Chr5:2017100-2017119 MsG0580024206.01.T01:intron 25.0%
!!! AAAATGAGGATTTTAAGTGT+TGG - Chr5:2014657-2014676 MsG0580024206.01.T01:intron 25.0%
!!! AAACCCTTTAAAACAATAAC+CGG + Chr5:2011781-2011800 None:intergenic 25.0%
!!! AATAAACTCATAGCTTTGTT+TGG - Chr5:2014459-2014478 MsG0580024206.01.T01:intron 25.0%
!!! AGCTTTTGATTCTAAAAAGT+CGG - Chr5:2015778-2015797 MsG0580024206.01.T01:intron 25.0%
!!! ATAAACTCATAGCTTTGTTT+GGG - Chr5:2014460-2014479 MsG0580024206.01.T01:intron 25.0%
!!! TATACAGCTTTATTTTTCTG+CGG - Chr5:2013481-2013500 MsG0580024206.01.T01:CDS 25.0%
!!! TTTTAAGGGACCAATAATAT+AGG - Chr5:2013190-2013209 MsG0580024206.01.T01:intron 25.0%
AAAAAGCAAGTACCTATTGA+CGG + Chr5:2013345-2013364 None:intergenic 30.0%
AAATCATGATACTCCTGATA+AGG + Chr5:2017773-2017792 None:intergenic 30.0%
AACAAAAATAGAGAAGGACA+TGG + Chr5:2017470-2017489 None:intergenic 30.0%
AAGATCGGTAATCTTCAAAA+GGG + Chr5:2013612-2013631 None:intergenic 30.0%
AATTAATGATCTCATGCACA+TGG - Chr5:2012534-2012553 MsG0580024206.01.T01:intron 30.0%
ACCATCCAACGAAATATAAT+CGG + Chr5:2011980-2011999 None:intergenic 30.0%
AGAATACCAGAAATAACTTG+GGG - Chr5:2017201-2017220 MsG0580024206.01.T01:intron 30.0%
AGGAACTAGTAAACTAGTAA+CGG - Chr5:2016726-2016745 MsG0580024206.01.T01:intron 30.0%
AGTAATATTCCATCCTACAT+AGG + Chr5:2014315-2014334 None:intergenic 30.0%
AGTGACAAATTAAGCAATGA+AGG + Chr5:2017862-2017881 None:intergenic 30.0%
ATACTATATATTGGGCTTGT+AGG - Chr5:2016706-2016725 MsG0580024206.01.T01:intron 30.0%
ATAGCAATGGAAGAAAAAAG+TGG + Chr5:2017967-2017986 None:intergenic 30.0%
ATAGGAATGACATCCAAAAT+CGG + Chr5:2012390-2012409 None:intergenic 30.0%
ATATGCAAATGTCTCATCAA+AGG + Chr5:2017142-2017161 None:intergenic 30.0%
ATGCAATAACAAGAACAGAA+CGG - Chr5:2017004-2017023 MsG0580024206.01.T01:intron 30.0%
CAAACAGAATTAGACACATT+TGG + Chr5:2018497-2018516 None:intergenic 30.0%
CAAAGCTATGAGTTTATTCT+AGG + Chr5:2014457-2014476 None:intergenic 30.0%
CAACATCAACCAATTTAGAA+TGG + Chr5:2014188-2014207 None:intergenic 30.0%
CACAAAGAAGCAAATCAATT+AGG + Chr5:2017322-2017341 None:intergenic 30.0%
CGTACAAAATTACTTATCGA+AGG - Chr5:2013794-2013813 MsG0580024206.01.T01:intron 30.0%
CTATGTCCTTACCTATTTAT+TGG - Chr5:2015150-2015169 MsG0580024206.01.T01:intron 30.0%
CTCTCTCTCTCTTTATATTT+AGG - Chr5:2016302-2016321 MsG0580024206.01.T01:CDS 30.0%
CTTCTGTTGGGATTAAAAAT+GGG - Chr5:2011869-2011888 MsG0580024206.01.T01:intron 30.0%
GCACATTAAGCCTATATTAT+TGG + Chr5:2013203-2013222 None:intergenic 30.0%
GGAACATATGAAACTAATTG+AGG - Chr5:2017835-2017854 MsG0580024206.01.T01:CDS 30.0%
GGAGACAAATAAATGAAATG+AGG - Chr5:2015171-2015190 MsG0580024206.01.T01:intron 30.0%
TAACTATCTAAACACATTGC+CGG + Chr5:2018133-2018152 None:intergenic 30.0%
TACTGAGAAATATTTGCCTT+TGG - Chr5:2016878-2016897 MsG0580024206.01.T01:intron 30.0%
TCAAAACAAGAATGGAAGAA+TGG - Chr5:2015960-2015979 MsG0580024206.01.T01:intron 30.0%
TCTTCTTATCATGTTACTGT+CGG - Chr5:2017176-2017195 MsG0580024206.01.T01:intron 30.0%
TGATGGAAGAATGTAAAATG+AGG - Chr5:2014643-2014662 MsG0580024206.01.T01:intron 30.0%
TGGTAAAAAATAGCAGATAG+CGG - Chr5:2014742-2014761 MsG0580024206.01.T01:intron 30.0%
TGGTCATTACAAAATGATAG+TGG + Chr5:2014413-2014432 None:intergenic 30.0%
TGGTTTATGTGAGAATGTTA+TGG - Chr5:2013403-2013422 MsG0580024206.01.T01:CDS 30.0%
TTACCCTCATCATCTTAATT+GGG + Chr5:2014869-2014888 None:intergenic 30.0%
TTGTCTCCAATAAATAGGTA+AGG + Chr5:2015159-2015178 None:intergenic 30.0%
TTTACCCTCATCATCTTAAT+TGG + Chr5:2014870-2014889 None:intergenic 30.0%
TTTCCCAATTAAGATGATGA+GGG - Chr5:2014863-2014882 MsG0580024206.01.T01:intron 30.0%
TTTCGTTAAACATAGTCTCT+TGG - Chr5:2017685-2017704 MsG0580024206.01.T01:CDS 30.0%
! AAAATTGCAGCATATCGATT+TGG - Chr5:2016841-2016860 MsG0580024206.01.T01:intron 30.0%
! AAGGATTTTGTTCATCATGA+TGG - Chr5:2016364-2016383 MsG0580024206.01.T01:intron 30.0%
! AGATGGTACATATGCATTTT+TGG + Chr5:2017909-2017928 None:intergenic 30.0%
! CAAAGTTTTTGTGAAATTGG+TGG - Chr5:2017103-2017122 MsG0580024206.01.T01:intron 30.0%
! GAAACTTCATAATGGAGAAT+AGG + Chr5:2016439-2016458 None:intergenic 30.0%
! GTGAAATATGTACTGATGAA+GGG - Chr5:2014093-2014112 MsG0580024206.01.T01:CDS 30.0%
! TGAAATATGTACTGATGAAG+GGG - Chr5:2014094-2014113 MsG0580024206.01.T01:CDS 30.0%
! TGTAACTTTTGCTAATGCTA+AGG - Chr5:2015406-2015425 MsG0580024206.01.T01:intron 30.0%
! TGTGAAATATGTACTGATGA+AGG - Chr5:2014092-2014111 MsG0580024206.01.T01:CDS 30.0%
! TTCTAGGAATTAAGATGGAA+TGG + Chr5:2014441-2014460 None:intergenic 30.0%
! TTTAAAGGGTTTGCTTAAAC+CGG - Chr5:2011789-2011808 MsG0580024206.01.T01:intron 30.0%
! TTTTCCCAATTAAGATGATG+AGG - Chr5:2014862-2014881 MsG0580024206.01.T01:intron 30.0%
! TTTTTGATGTGCTTATAAGG+AGG - Chr5:2014156-2014175 MsG0580024206.01.T01:CDS 30.0%
!! CACTAATGAGTTTTCAAGAT+CGG + Chr5:2013627-2013646 None:intergenic 30.0%
!! CTAATTGATTTGCTTCTTTG+TGG - Chr5:2017320-2017339 MsG0580024206.01.T01:intron 30.0%
!! TATTTTGAATCAAGTTCGAG+TGG - Chr5:2018098-2018117 MsG0580024206.01.T01:CDS 30.0%
!! TTGTTTTGTTCATTTTCTGG+TGG - Chr5:2016666-2016685 MsG0580024206.01.T01:intron 30.0%
!!! AACTATTCTGTTTTTGTGAG+TGG + Chr5:2011602-2011621 None:intergenic 30.0%
!!! AATGGCGATAGTTGTTTTAA+GGG - Chr5:2013176-2013195 MsG0580024206.01.T01:intron 30.0%
!!! ACATATGCATTTTTGGTTCT+TGG + Chr5:2017902-2017921 None:intergenic 30.0%
!!! AGTAGCTACATTGATTTTGA+TGG - Chr5:2013892-2013911 MsG0580024206.01.T01:CDS 30.0%
!!! ATTTTGATTAATTCCCTTGC+TGG - Chr5:2014689-2014708 MsG0580024206.01.T01:intron 30.0%
!!! CTGCTATTTTTTACCAAACA+GGG + Chr5:2014738-2014757 None:intergenic 30.0%
!!! GAACCGGTTATTGTTTTAAA+GGG - Chr5:2011775-2011794 MsG0580024206.01.T01:intron 30.0%
!!! TACATTGATTTTGATGGTAG+TGG - Chr5:2013898-2013917 MsG0580024206.01.T01:CDS 30.0%
!!! TCTGCTATTTTTTACCAAAC+AGG + Chr5:2014739-2014758 None:intergenic 30.0%
!!! TGAACCGGTTATTGTTTTAA+AGG - Chr5:2011774-2011793 MsG0580024206.01.T01:intron 30.0%
!!! TTGATGTTGCTATTTTTGTG+TGG - Chr5:2014199-2014218 MsG0580024206.01.T01:CDS 30.0%
!!! TTTCTATTTTAGGTTGCTGA+TGG - Chr5:2014626-2014645 MsG0580024206.01.T01:intron 30.0%
AAATCTAAACCCTTGTGAAG+TGG + Chr5:2016085-2016104 None:intergenic 35.0%
AACAACATTCTTGCCTATGT+AGG - Chr5:2014299-2014318 MsG0580024206.01.T01:CDS 35.0%
AACAGAAGGACCAACAAAAT+TGG + Chr5:2012286-2012305 None:intergenic 35.0%
AACATAGTCTCTTGGTATGT+TGG - Chr5:2017693-2017712 MsG0580024206.01.T01:CDS 35.0%
AAGAAGGAAGATAAGGAACT+TGG + Chr5:2013750-2013769 None:intergenic 35.0%
AATCTAAACCCTTGTGAAGT+GGG + Chr5:2016084-2016103 None:intergenic 35.0%
ACAAAATCCTTTCCATCTTC+AGG + Chr5:2016355-2016374 None:intergenic 35.0%
ACAGAAGGACCAACAAAATT+GGG + Chr5:2012285-2012304 None:intergenic 35.0%
ACATAGACTAAAGAGTAGCA+AGG + Chr5:2014592-2014611 None:intergenic 35.0%
ACATAGTCTCTTGGTATGTT+GGG - Chr5:2017694-2017713 MsG0580024206.01.T01:CDS 35.0%
ACCCAATAGAACTACCAATT+AGG - Chr5:2018608-2018627 MsG0580024206.01.T01:five_prime_UTR 35.0%
ACGGAAGAAAATGAAAGTGA+TGG - Chr5:2015727-2015746 MsG0580024206.01.T01:intron 35.0%
AGAACACCATTGCTACAAAT+TGG + Chr5:2018206-2018225 None:intergenic 35.0%
AGAGCAGTTTAAGAAAGGAT+TGG - Chr5:2012185-2012204 MsG0580024206.01.T01:three_prime_UTR 35.0%
AGAGGATATTAAAGCAGCTA+AGG - Chr5:2011915-2011934 MsG0580024206.01.T01:intron 35.0%
AGCAATGGGAAACTTCATAA+TGG + Chr5:2016447-2016466 None:intergenic 35.0%
AGCATCACTGAAAATCTCAT+CGG + Chr5:2015912-2015931 None:intergenic 35.0%
AGGAGTTCCAATCTTACATA+AGG + Chr5:2016052-2016071 None:intergenic 35.0%
ATACTCCTGATAAGGTCAAA+AGG + Chr5:2017765-2017784 None:intergenic 35.0%
ATATGTACCATCTCACTTTC+GGG - Chr5:2017916-2017935 MsG0580024206.01.T01:CDS 35.0%
ATTAAGATGGAATGGAGCAA+TGG + Chr5:2014433-2014452 None:intergenic 35.0%
ATTATGAAGTTTCCCATTGC+TGG - Chr5:2016446-2016465 MsG0580024206.01.T01:intron 35.0%
CAAACTGCATCATATGATAC+AGG + Chr5:2013059-2013078 None:intergenic 35.0%
CAACACATAAAAAGGAACAG+AGG - Chr5:2015291-2015310 MsG0580024206.01.T01:intron 35.0%
CAAGATCGGTAATCTTCAAA+AGG + Chr5:2013613-2013632 None:intergenic 35.0%
CAGAGGGTTGTAAAATATGA+TGG - Chr5:2013141-2013160 MsG0580024206.01.T01:intron 35.0%
CAGTATTTATGTTCTTGAGG+TGG - Chr5:2018387-2018406 MsG0580024206.01.T01:CDS 35.0%
CATATGTACCATCTCACTTT+CGG - Chr5:2017915-2017934 MsG0580024206.01.T01:CDS 35.0%
CATTAGCAAAAGTTACAAGC+AGG + Chr5:2015403-2015422 None:intergenic 35.0%
CCATCCAACGAAATATAATC+GGG + Chr5:2011979-2011998 None:intergenic 35.0%
CCCAATAGAACTACCAATTA+GGG - Chr5:2018609-2018628 MsG0580024206.01.T01:five_prime_UTR 35.0%
CGATCTTGAAAACTCATTAG+TGG - Chr5:2013625-2013644 MsG0580024206.01.T01:intron 35.0%
CTCTACCATAAATTCAAGGA+AGG + Chr5:2016245-2016264 None:intergenic 35.0%
CTTCTCTCCTTATGTAAGAT+TGG - Chr5:2016042-2016061 MsG0580024206.01.T01:intron 35.0%
GAAGAAGAGCAGTTTAAGAA+AGG - Chr5:2012180-2012199 MsG0580024206.01.T01:three_prime_UTR 35.0%
GAATACCAGAAATAACTTGG+GGG - Chr5:2017202-2017221 MsG0580024206.01.T01:intron 35.0%
GAGAAATATTTGCCTTTGGA+AGG - Chr5:2016882-2016901 MsG0580024206.01.T01:intron 35.0%
GATTATATTTCGTTGGATGG+TGG - Chr5:2011979-2011998 MsG0580024206.01.T01:intron 35.0%
GATTGCAAAAAAAGCTATGC+TGG - Chr5:2012425-2012444 MsG0580024206.01.T01:intron 35.0%
GCACAGTATTTATGTTCTTG+AGG - Chr5:2018384-2018403 MsG0580024206.01.T01:CDS 35.0%
GCTTCTGTTGGGATTAAAAA+TGG - Chr5:2011868-2011887 MsG0580024206.01.T01:intron 35.0%
GGAATATAGTCAATTATCCC+TGG - Chr5:2015937-2015956 MsG0580024206.01.T01:intron 35.0%
GTACCAAACTCATTTGTATC+AGG - Chr5:2012489-2012508 MsG0580024206.01.T01:intron 35.0%
TCAATGAATATGATCATGCC+AGG - Chr5:2017607-2017626 MsG0580024206.01.T01:CDS 35.0%
TGATGCTGTTGCTAAACTTA+CGG - Chr5:2016591-2016610 MsG0580024206.01.T01:intron 35.0%
TGGCATGATCATATTCATTG+AGG + Chr5:2017608-2017627 None:intergenic 35.0%
TGTCAAAATTGCAATCTGAC+AGG - Chr5:2014341-2014360 MsG0580024206.01.T01:CDS 35.0%
TTATGAAGTTTCCCATTGCT+GGG - Chr5:2016447-2016466 MsG0580024206.01.T01:intron 35.0%
TTGCAAATATGTCCTTCCAA+AGG + Chr5:2016897-2016916 None:intergenic 35.0%
TTGGAAGAATGCACGAAATA+AGG + Chr5:2013731-2013750 None:intergenic 35.0%
! AAAGTCTTATCCCACTAAGT+GGG + Chr5:2013453-2013472 None:intergenic 35.0%
! AATTGGTAGTTCTATTGGGT+TGG + Chr5:2018608-2018627 None:intergenic 35.0%
! ACCCTAATTGGTAGTTCTAT+TGG + Chr5:2018613-2018632 None:intergenic 35.0%
! AGTCAGATTCTGAAGAAAAC+GGG - Chr5:2011827-2011846 MsG0580024206.01.T01:intron 35.0%
! AGTTTTTGTGAAATTGGTGG+TGG - Chr5:2017106-2017125 MsG0580024206.01.T01:intron 35.0%
! ATGTGATTCCTGTCATTTGT+GGG + Chr5:2013540-2013559 None:intergenic 35.0%
! CAACCTTTTCCACCAAATTT+GGG + Chr5:2016411-2016430 None:intergenic 35.0%
! CATCATATTTTACAACCCTC+TGG + Chr5:2013143-2013162 None:intergenic 35.0%
! CCCTAATTGGTAGTTCTATT+GGG + Chr5:2018612-2018631 None:intergenic 35.0%
! GAAATATGTACTGATGAAGG+GGG - Chr5:2014095-2014114 MsG0580024206.01.T01:CDS 35.0%
! GAGTCAGATTCTGAAGAAAA+CGG - Chr5:2011826-2011845 MsG0580024206.01.T01:intron 35.0%
! GTAGCAAGGACTCAAATTTT+TGG + Chr5:2014578-2014597 None:intergenic 35.0%
! TATGCGACTTTTTACAGGTA+AGG - Chr5:2013702-2013721 MsG0580024206.01.T01:intron 35.0%
! TGTGGTTTTCTTGGTAAGAA+AGG - Chr5:2012701-2012720 MsG0580024206.01.T01:intron 35.0%
! TTGAGTGTTGTTGTTGTTGT+TGG + Chr5:2011264-2011283 None:intergenic 35.0%
! TTTTCTTCAGAATCTGACTC+CGG + Chr5:2011826-2011845 None:intergenic 35.0%
!! AAATGATAGTGGAGATGAAG+AGG + Chr5:2014402-2014421 None:intergenic 35.0%
!! AATCTTTTTAGGGGAGTTCT+TGG - Chr5:2016164-2016183 MsG0580024206.01.T01:intron 35.0%
!! AATTTGTTGTCCAAAGTGGT+AGG - Chr5:2014224-2014243 MsG0580024206.01.T01:CDS 35.0%
!! AGGAAGTGTCCATTCTAAAT+TGG - Chr5:2014176-2014195 MsG0580024206.01.T01:CDS 35.0%
!! ATCTCAGCTTGTTGAGATAT+AGG + Chr5:2012408-2012427 None:intergenic 35.0%
!! ATTTGTTGTCCAAAGTGGTA+GGG - Chr5:2014225-2014244 MsG0580024206.01.T01:CDS 35.0%
!! CCAATTTTCGAGCTTATAGT+GGG + Chr5:2014997-2015016 None:intergenic 35.0%
!! CGGATTATTGATTCCCTATA+TGG - Chr5:2017024-2017043 MsG0580024206.01.T01:intron 35.0%
!! GAATGGCGATAGTTGTTTTA+AGG - Chr5:2013175-2013194 MsG0580024206.01.T01:intron 35.0%
!! GTGTTTATTTTCAGTCGTTG+TGG + Chr5:2014047-2014066 None:intergenic 35.0%
!! TCTGATATGCTTCTAAAGTG+AGG + Chr5:2016973-2016992 None:intergenic 35.0%
!! TGCTTAATTTGTCACTGCAA+CGG - Chr5:2017866-2017885 MsG0580024206.01.T01:CDS 35.0%
!!! AGAAGTTTGGGTGGTTTTTT+AGG + Chr5:2011469-2011488 None:intergenic 35.0%
!!! AGTGGCTCTTTTTTCGAAAA+TGG + Chr5:2015522-2015541 None:intergenic 35.0%
!!! ATGTCAGTTTTAAGCAGGAA+AGG - Chr5:2015590-2015609 MsG0580024206.01.T01:intron 35.0%
!!! CAAATTTTTGGCTTGAGCAA+AGG + Chr5:2014566-2014585 None:intergenic 35.0%
!!! TGATTTTGATGGTAGTGGAA+AGG - Chr5:2013903-2013922 MsG0580024206.01.T01:CDS 35.0%
!!! TGGGTGGTTTTTTAGGTTTA+GGG + Chr5:2011462-2011481 None:intergenic 35.0%
!!! TTCCATTCTTGTTTTGACCA+GGG + Chr5:2015957-2015976 None:intergenic 35.0%
!!! TTGCTGTATTTTGACTCTGT+TGG - Chr5:2018295-2018314 MsG0580024206.01.T01:CDS 35.0%
!!! TTGGGTGGTTTTTTAGGTTT+AGG + Chr5:2011463-2011482 None:intergenic 35.0%
AAACACTTACGAGTTTAGGC+AGG - Chr5:2014061-2014080 MsG0580024206.01.T01:CDS 40.0%
AAATAACTTGGGGGCTAATG+GGG - Chr5:2017211-2017230 MsG0580024206.01.T01:intron 40.0%
AAATGTTGTAGCAGCAGCAT+CGG - Chr5:2012329-2012348 MsG0580024206.01.T01:CDS 40.0%
AAGCTATGCTGGACAATGTT+AGG - Chr5:2012436-2012455 MsG0580024206.01.T01:intron 40.0%
AATTTGCCTAGTGTAGGTTG+AGG - Chr5:2012728-2012747 MsG0580024206.01.T01:intron 40.0%
ACATAAGGAGAGAAGATCAG+TGG + Chr5:2016037-2016056 None:intergenic 40.0%
ACATAGAAAGGAATGAGGAG+AGG + Chr5:2015066-2015085 None:intergenic 40.0%
ACATTCTTGCCTATGTAGGA+TGG - Chr5:2014303-2014322 MsG0580024206.01.T01:CDS 40.0%
ACCTACAACACAAGACAAGA+TGG + Chr5:2016775-2016794 None:intergenic 40.0%
AGAAATAACTTGGGGGCTAA+TGG - Chr5:2017209-2017228 MsG0580024206.01.T01:intron 40.0%
AGAACTACCAATTAGGGTTG+AGG - Chr5:2018615-2018634 MsG0580024206.01.T01:five_prime_UTR 40.0%
AGATGAAATAGGACGAGAAG+CGG + Chr5:2011737-2011756 None:intergenic 40.0%
AGGGATCACAGTTATAGCAA+TGG + Chr5:2017980-2017999 None:intergenic 40.0%
ATAAATACTGTGCGCCAAAC+TGG + Chr5:2018377-2018396 None:intergenic 40.0%
ATATCAGTCACAGCGAGATT+TGG - Chr5:2015874-2015893 MsG0580024206.01.T01:intron 40.0%
ATCACAAACAGAGTGTGTGT+GGG + Chr5:2013013-2013032 None:intergenic 40.0%
ATCCCTGGTCAAAACAAGAA+TGG - Chr5:2015952-2015971 MsG0580024206.01.T01:intron 40.0%
ATCGGTAATCTTCAAAAGGG+AGG + Chr5:2013609-2013628 None:intergenic 40.0%
ATGCTGCTGCTACAACATTT+GGG + Chr5:2012329-2012348 None:intergenic 40.0%
ATGCTTGTACTGTGGCTATT+AGG - Chr5:2012829-2012848 MsG0580024206.01.T01:CDS 40.0%
ATGTAAGATTGGAACTCCTG+AGG - Chr5:2016053-2016072 MsG0580024206.01.T01:intron 40.0%
ATGTGATATGTAGCCCAGTT+TGG - Chr5:2018360-2018379 MsG0580024206.01.T01:CDS 40.0%
ATTTATGTTCTTGAGGTGGC+TGG - Chr5:2018391-2018410 MsG0580024206.01.T01:CDS 40.0%
CACAAATGACAGGAATCACA+TGG - Chr5:2013539-2013558 MsG0580024206.01.T01:intron 40.0%
CACTAACAATGACGACGAAA+TGG - Chr5:2015538-2015557 MsG0580024206.01.T01:intron 40.0%
CACTTAGTGGGATAAGACTT+TGG - Chr5:2013452-2013471 MsG0580024206.01.T01:CDS 40.0%
CAGCCTGATACAAATGAGTT+TGG + Chr5:2012495-2012514 None:intergenic 40.0%
CATAGTCTCTTGGTATGTTG+GGG - Chr5:2017695-2017714 MsG0580024206.01.T01:CDS 40.0%
CATTTCGTCGTCATTGTTAG+TGG + Chr5:2015540-2015559 None:intergenic 40.0%
CCATACACATTTGCAACAGA+AGG + Chr5:2012300-2012319 None:intergenic 40.0%
CCCACTATAAGCTCGAAAAT+TGG - Chr5:2014994-2015013 MsG0580024206.01.T01:intron 40.0%
CCCGATTATATTTCGTTGGA+TGG - Chr5:2011976-2011995 MsG0580024206.01.T01:intron 40.0%
CCTTCTGTTGCAAATGTGTA+TGG - Chr5:2012297-2012316 MsG0580024206.01.T01:CDS 40.0%
CTGTTGCTAAACTTACGGTA+TGG - Chr5:2016596-2016615 MsG0580024206.01.T01:intron 40.0%
GAAAATGAAAGTGATGGCTG+AGG - Chr5:2015733-2015752 MsG0580024206.01.T01:intron 40.0%
GAAATAACTTGGGGGCTAAT+GGG - Chr5:2017210-2017229 MsG0580024206.01.T01:intron 40.0%
GAACTACCAATTAGGGTTGA+GGG - Chr5:2018616-2018635 MsG0580024206.01.T01:five_prime_UTR 40.0%
GCAACACATAGAAAGGAATG+AGG + Chr5:2015071-2015090 None:intergenic 40.0%
GCTTTAATATCCTCTTCACC+AGG + Chr5:2011910-2011929 None:intergenic 40.0%
GGATCAAATTTGCCTAGTGT+AGG - Chr5:2012722-2012741 MsG0580024206.01.T01:intron 40.0%
GGCTGCAACAAAAATAGAGA+AGG + Chr5:2017476-2017495 None:intergenic 40.0%
GTCTAAATCTCTCAAGCCAT+AGG + Chr5:2014716-2014735 None:intergenic 40.0%
GTTCGAGTGGAGTTTATTTC+CGG - Chr5:2018111-2018130 MsG0580024206.01.T01:CDS 40.0%
TAAAGCAGCTAAGGCTAAGA+GGG - Chr5:2011924-2011943 MsG0580024206.01.T01:intron 40.0%
TAAATACTGTGCGCCAAACT+GGG + Chr5:2018376-2018395 None:intergenic 40.0%
TATGTACCATCTCACTTTCG+GGG - Chr5:2017917-2017936 MsG0580024206.01.T01:CDS 40.0%
TCCATCTTGTCTTGTGTTGT+AGG - Chr5:2016771-2016790 MsG0580024206.01.T01:intron 40.0%
TCTGGAGAGAAGAAATGTAC+AGG - Chr5:2017542-2017561 MsG0580024206.01.T01:CDS 40.0%
TGAGAGATTTAGACCCTGTT+TGG - Chr5:2014722-2014741 MsG0580024206.01.T01:intron 40.0%
TGATTCCCTATATGGCGTTT+GGG - Chr5:2017032-2017051 MsG0580024206.01.T01:intron 40.0%
TGCACCCGATTATATTTCGT+TGG - Chr5:2011972-2011991 MsG0580024206.01.T01:intron 40.0%
TGCTTGTACTGTGGCTATTA+GGG - Chr5:2012830-2012849 MsG0580024206.01.T01:CDS 40.0%
TTAAAGCAGCTAAGGCTAAG+AGG - Chr5:2011923-2011942 MsG0580024206.01.T01:intron 40.0%
TTCACACAACAACCGTCAAT+AGG - Chr5:2013330-2013349 MsG0580024206.01.T01:CDS 40.0%
TTGATTCCCTATATGGCGTT+TGG - Chr5:2017031-2017050 MsG0580024206.01.T01:intron 40.0%
TTGTGAGAGGAAGAAGAAGA+GGG + Chr5:2011574-2011593 None:intergenic 40.0%
TTTATGTTCTTGAGGTGGCT+GGG - Chr5:2018392-2018411 MsG0580024206.01.T01:CDS 40.0%
TTTCAGCTCCTAAGACTGTT+TGG + Chr5:2015025-2015044 None:intergenic 40.0%
TTTCGAAGCCTTAAGCTTGA+AGG - Chr5:2018246-2018265 MsG0580024206.01.T01:CDS 40.0%
TTTGTGAGAGGAAGAAGAAG+AGG + Chr5:2011575-2011594 None:intergenic 40.0%
! AAGCGAGATTTGCTTCTGTT+GGG - Chr5:2011857-2011876 MsG0580024206.01.T01:intron 40.0%
! AAGTCTTATCCCACTAAGTG+GGG + Chr5:2013452-2013471 None:intergenic 40.0%
! ACAATAACCGGTTCAGAAGA+AGG + Chr5:2011769-2011788 None:intergenic 40.0%
! ACTTATGGATTGCCTGAAGA+TGG - Chr5:2016340-2016359 MsG0580024206.01.T01:intron 40.0%
! AGAAAGGATTGGTGAAGAGA+TGG - Chr5:2012196-2012215 MsG0580024206.01.T01:three_prime_UTR 40.0%
! ATTAGCCCCCAAGTTATTTC+TGG + Chr5:2017210-2017229 None:intergenic 40.0%
! ATTTGCCTAGTGTAGGTTGA+GGG - Chr5:2012729-2012748 MsG0580024206.01.T01:intron 40.0%
! CAAAGTCTTATCCCACTAAG+TGG + Chr5:2013454-2013473 None:intergenic 40.0%
! CAACTCTTCTAGAAGTCAGT+AGG - Chr5:2014494-2014513 MsG0580024206.01.T01:intron 40.0%
! CATGTGATTCCTGTCATTTG+TGG + Chr5:2013541-2013560 None:intergenic 40.0%
! GAAAGGATTGGTGAAGAGAT+GGG - Chr5:2012197-2012216 MsG0580024206.01.T01:three_prime_UTR 40.0%
! GATAGCCTTTTGACCTTATC+AGG - Chr5:2017757-2017776 MsG0580024206.01.T01:CDS 40.0%
! GATTTTCAGTGATGCTTCTG+AGG - Chr5:2015916-2015935 MsG0580024206.01.T01:intron 40.0%
! GCAACCTTTTCCACCAAATT+TGG + Chr5:2016412-2016431 None:intergenic 40.0%
! GGTTTGGGTTCAGATGAAAT+AGG + Chr5:2011748-2011767 None:intergenic 40.0%
! GTCAGATTCTGAAGAAAACG+GGG - Chr5:2011828-2011847 MsG0580024206.01.T01:intron 40.0%
! GTGATGAAATTCGGAGCATT+TGG - Chr5:2018461-2018480 MsG0580024206.01.T01:CDS 40.0%
! TCTGAAGTACTCACTTGAGA+AGG + Chr5:2017739-2017758 None:intergenic 40.0%
! TGTCCCAAATTTGGTGGAAA+AGG - Chr5:2016405-2016424 MsG0580024206.01.T01:intron 40.0%
! TGTGATTCCTGTCATTTGTG+GGG + Chr5:2013539-2013558 None:intergenic 40.0%
! TTCTAAAAAGTCGGCATCCA+TGG - Chr5:2015787-2015806 MsG0580024206.01.T01:intron 40.0%
! TTTGTATCAGGCTGAGCTTT+TGG - Chr5:2012501-2012520 MsG0580024206.01.T01:intron 40.0%
! TTTTGTCTCCAGTGACACTT+GGG + Chr5:2017062-2017081 None:intergenic 40.0%
! TTTTTGTCTCCAGTGACACT+TGG + Chr5:2017063-2017082 None:intergenic 40.0%
!! CAAGGAGGCATTATGAGTTT+AGG - Chr5:2017653-2017672 MsG0580024206.01.T01:CDS 40.0%
!! GCCAATTTTCGAGCTTATAG+TGG + Chr5:2014998-2015017 None:intergenic 40.0%
!! GCTTAATTTGTCACTGCAAC+GGG - Chr5:2017867-2017886 MsG0580024206.01.T01:CDS 40.0%
!! GGTGAATTTGTTGTCCAAAG+TGG - Chr5:2014220-2014239 MsG0580024206.01.T01:CDS 40.0%
!! TTGGATGGTGGAAGTAATCA+TGG - Chr5:2011991-2012010 MsG0580024206.01.T01:intron 40.0%
!!! AGAGAAGAAGGGTGTTTTTG+AGG - Chr5:2012092-2012111 MsG0580024206.01.T01:three_prime_UTR 40.0%
!!! CTGCAATGTCAGTTTTAAGC+AGG - Chr5:2015585-2015604 MsG0580024206.01.T01:intron 40.0%
!!! CTTCCATTCTTGTTTTGACC+AGG + Chr5:2015958-2015977 None:intergenic 40.0%
!!! GGGAAAGATTCGTTTTTTCC+TGG - Chr5:2011889-2011908 MsG0580024206.01.T01:intron 40.0%
!!! GGGTGGTTTTTTAGGTTTAG+GGG + Chr5:2011461-2011480 None:intergenic 40.0%
!!! TGGTTTTTTAGGTTTAGGGG+CGG + Chr5:2011458-2011477 None:intergenic 40.0%
!!! TTCGTTTTTTCCTGGTGAAG+AGG - Chr5:2011897-2011916 MsG0580024206.01.T01:intron 40.0%
AAGATTGGAACTCCTGAGGT+GGG - Chr5:2016057-2016076 MsG0580024206.01.T01:intron 45.0%
AAGCCTTAAGCTTGAAGGCA+GGG - Chr5:2018251-2018270 MsG0580024206.01.T01:CDS 45.0%
AAGGGAGATGGAGAGAAGAA+GGG - Chr5:2012081-2012100 MsG0580024206.01.T01:three_prime_UTR 45.0%
AATTAGGGTTGAGGGATGGA+AGG - Chr5:2018624-2018643 MsG0580024206.01.T01:five_prime_UTR 45.0%
ACATTGGAAGGTGAAGGTGA+AGG + Chr5:2011634-2011653 None:intergenic 45.0%
ACCAGCTTGAGGTTGAACAT+TGG + Chr5:2011650-2011669 None:intergenic 45.0%
ACCCAAACCTTCTTCTGAAC+CGG - Chr5:2011759-2011778 MsG0580024206.01.T01:intron 45.0%
ACTAAGCATGTCCCAGCAAT+GGG + Chr5:2016461-2016480 None:intergenic 45.0%
ACTTACGAGTTTAGGCAGGT+AGG - Chr5:2014065-2014084 MsG0580024206.01.T01:CDS 45.0%
AGAGGAAGAAGAAGAGGGTT+TGG + Chr5:2011569-2011588 None:intergenic 45.0%
AGGAAGAAGAAGAGGGTTTG+GGG + Chr5:2011567-2011586 None:intergenic 45.0%
AGTGATAAGCTCTGCTGTCA+AGG + Chr5:2014369-2014388 None:intergenic 45.0%
ATATGATCATGCCAGGACCA+TGG - Chr5:2017614-2017633 MsG0580024206.01.T01:CDS 45.0%
ATGGGGTGGGATATTCGTTA+AGG - Chr5:2017228-2017247 MsG0580024206.01.T01:intron 45.0%
CAATGACGACGAAATGGTTG+AGG - Chr5:2015544-2015563 MsG0580024206.01.T01:intron 45.0%
CATACATGTCCCTACCACTT+TGG + Chr5:2014237-2014256 None:intergenic 45.0%
CCAAACTCATCTAACTGCAC+TGG + Chr5:2015686-2015705 None:intergenic 45.0%
CCACATGAAGTGTAACGAAG+TGG + Chr5:2016212-2016231 None:intergenic 45.0%
CCACTTCGTTACACTTCATG+TGG - Chr5:2016209-2016228 MsG0580024206.01.T01:CDS 45.0%
CCAGTGCAGTTAGATGAGTT+TGG - Chr5:2015683-2015702 MsG0580024206.01.T01:intron 45.0%
CCTTGAGCTTGTCCCAAATT+TGG - Chr5:2016396-2016415 MsG0580024206.01.T01:intron 45.0%
CGAAACTAGCAGATCTGCAA+GGG + Chr5:2016554-2016573 None:intergenic 45.0%
CTATGCTGGACAATGTTAGG+AGG - Chr5:2012439-2012458 MsG0580024206.01.T01:intron 45.0%
CTCATAATGCCTCCTTGAGA+TGG + Chr5:2017650-2017669 None:intergenic 45.0%
GAAGATCAGTGGAAGACTCA+CGG + Chr5:2016026-2016045 None:intergenic 45.0%
GAGGAAGAAGAAGAGGGTTT+GGG + Chr5:2011568-2011587 None:intergenic 45.0%
GATCACAAACAGAGTGTGTG+TGG + Chr5:2013014-2013033 None:intergenic 45.0%
GATGCTGCTGCTACAACATT+TGG + Chr5:2012330-2012349 None:intergenic 45.0%
GCTTGAGGTTGAACATTGGA+AGG + Chr5:2011646-2011665 None:intergenic 45.0%
GGACAATGTTAGGAGGCTTA+AGG - Chr5:2012446-2012465 MsG0580024206.01.T01:intron 45.0%
GGGATTAGAGTAGAGGTTGT+AGG - Chr5:2017280-2017299 MsG0580024206.01.T01:intron 45.0%
GGTTGAACATTGGAAGGTGA+AGG + Chr5:2011640-2011659 None:intergenic 45.0%
GTCGATGTGCTTTGCAATCA+AGG - Chr5:2012876-2012895 MsG0580024206.01.T01:CDS 45.0%
TAACCCTGCCTTCAAGCTTA+AGG + Chr5:2018257-2018276 None:intergenic 45.0%
TAAGATTGGAACTCCTGAGG+TGG - Chr5:2016056-2016075 MsG0580024206.01.T01:intron 45.0%
TAATGCCTCCTTGAGATGGA+AGG + Chr5:2017646-2017665 None:intergenic 45.0%
TAATTCCCTTGCTGGACCTA+TGG - Chr5:2014697-2014716 MsG0580024206.01.T01:intron 45.0%
TACCAATTAGGGTTGAGGGA+TGG - Chr5:2018620-2018639 MsG0580024206.01.T01:five_prime_UTR 45.0%
TCCAATGTTCAACCTCAAGC+TGG - Chr5:2011646-2011665 MsG0580024206.01.T01:intron 45.0%
TCCCACCAAACATTGCAATC+CGG + Chr5:2012059-2012078 None:intergenic 45.0%
TCGAAACTAGCAGATCTGCA+AGG + Chr5:2016555-2016574 None:intergenic 45.0%
TCTTGGTATGTTGGGGAGTT+CGG - Chr5:2017702-2017721 MsG0580024206.01.T01:CDS 45.0%
TGAGCTTGTCCCAAATTTGG+TGG - Chr5:2016399-2016418 MsG0580024206.01.T01:intron 45.0%
TGGATTGCCTGAAGATGGAA+AGG - Chr5:2016345-2016364 MsG0580024206.01.T01:intron 45.0%
TGGGGTGGGATATTCGTTAA+GGG - Chr5:2017229-2017248 MsG0580024206.01.T01:intron 45.0%
TGGTGAAGAGATGGGATGAA+GGG - Chr5:2012205-2012224 MsG0580024206.01.T01:three_prime_UTR 45.0%
TGTTGAGCAACTTGCACAAC+AGG + Chr5:2012261-2012280 None:intergenic 45.0%
TTCCATCCCTCAACCCTAAT+TGG + Chr5:2018625-2018644 None:intergenic 45.0%
TTGCTGTCATGCTTGTACTG+TGG - Chr5:2012821-2012840 MsG0580024206.01.T01:CDS 45.0%
TTGGTGAAGAGATGGGATGA+AGG - Chr5:2012204-2012223 MsG0580024206.01.T01:three_prime_UTR 45.0%
TTGTGTTGTAGGTCCCTACA+TGG - Chr5:2016782-2016801 MsG0580024206.01.T01:intron 45.0%
! AACCGGTTCAGAAGAAGGTT+TGG + Chr5:2011764-2011783 None:intergenic 45.0%
! AAGCTCACGAAGTGCTTCTA+AGG + Chr5:2011680-2011699 None:intergenic 45.0%
! AATTCGGAGCATTTGGTACG+AGG - Chr5:2018468-2018487 MsG0580024206.01.T01:CDS 45.0%
! ACCGGTTCAGAAGAAGGTTT+GGG + Chr5:2011763-2011782 None:intergenic 45.0%
! ATCACATTCTTGCTGTCTGC+AGG + Chr5:2018347-2018366 None:intergenic 45.0%
! CCAAATTTGGGACAAGCTCA+AGG + Chr5:2016399-2016418 None:intergenic 45.0%
! CTGTGGCTATTAGGGTTAGT+TGG - Chr5:2012838-2012857 MsG0580024206.01.T01:CDS 45.0%
! GAAGCGAGATTTGCTTCTGT+TGG - Chr5:2011856-2011875 MsG0580024206.01.T01:intron 45.0%
! GCAATGTTTGGTGGGAAGAA+GGG - Chr5:2012063-2012082 MsG0580024206.01.T01:three_prime_UTR 45.0%
! GCTCAACAGCCCAATTTTGT+TGG - Chr5:2012273-2012292 MsG0580024206.01.T01:CDS 45.0%
! GCTGTCACTTGGAAAGATTC+TGG - Chr5:2017524-2017543 MsG0580024206.01.T01:CDS 45.0%
! GGCTTTGTGTATGAACTTGC+TGG - Chr5:2017814-2017833 MsG0580024206.01.T01:CDS 45.0%
! GTGAGTGGTGATTTTGTGAG+AGG + Chr5:2011587-2011606 None:intergenic 45.0%
! GTGATTCCTGTCATTTGTGG+GGG + Chr5:2013538-2013557 None:intergenic 45.0%
! TCATACACAAAGCCGACTCT+GGG + Chr5:2017808-2017827 None:intergenic 45.0%
! TGCAATGTTTGGTGGGAAGA+AGG - Chr5:2012062-2012081 MsG0580024206.01.T01:three_prime_UTR 45.0%
! TTCATACACAAAGCCGACTC+TGG + Chr5:2017809-2017828 None:intergenic 45.0%
! TTTGCCTAGTGTAGGTTGAG+GGG - Chr5:2012730-2012749 MsG0580024206.01.T01:intron 45.0%
!! ACATCCAAAATCGGTGTTGC+TGG + Chr5:2012381-2012400 None:intergenic 45.0%
!! ACGAAGTGCTTCTAAGGTGT+AGG + Chr5:2011674-2011693 None:intergenic 45.0%
!! AGTACTAGTGGACTCCATGT+AGG + Chr5:2016799-2016818 None:intergenic 45.0%
!! ATGGTAGTGGAAAGGCTTTG+TGG - Chr5:2013911-2013930 MsG0580024206.01.T01:CDS 45.0%
!! ATTTTACAACCCTCTGGCTC+TGG + Chr5:2013137-2013156 None:intergenic 45.0%
!! CATCCAAAATCGGTGTTGCT+GGG + Chr5:2012380-2012399 None:intergenic 45.0%
!! GCTATTAGGGTTAGTTGGCT+GGG - Chr5:2012843-2012862 MsG0580024206.01.T01:CDS 45.0%
!! GTACTAGTGGACTCCATGTA+GGG + Chr5:2016798-2016817 None:intergenic 45.0%
!! GTTCTATTGGGTTGGTGATG+AGG + Chr5:2018600-2018619 None:intergenic 45.0%
!!! AATCCCAGCAACACCGATTT+TGG - Chr5:2012374-2012393 MsG0580024206.01.T01:CDS 45.0%
!!! GAAGGGTGTTTTTGAGGTTG+CGG - Chr5:2012098-2012117 MsG0580024206.01.T01:three_prime_UTR 45.0%
!!! TTTTTAGGTTTAGGGGCGGA+GGG + Chr5:2011454-2011473 None:intergenic 45.0%
!!! TTTTTGAGGTTGCGGATGAG+AGG - Chr5:2012106-2012125 MsG0580024206.01.T01:three_prime_UTR 45.0%
!!! TTTTTTAGGTTTAGGGGCGG+AGG + Chr5:2011455-2011474 None:intergenic 45.0%
AAGAAGAAGAGGGTTTGGGG+CGG + Chr5:2011564-2011583 None:intergenic 50.0%
AAGCAGGAAAGGTGACAACG+TGG - Chr5:2015601-2015620 MsG0580024206.01.T01:intron 50.0%
AAGCGGTTGTAGGAGTGACT+AGG + Chr5:2011720-2011739 None:intergenic 50.0%
AAGGTGTAGGTACCAGCTTG+AGG + Chr5:2011661-2011680 None:intergenic 50.0%
ACACACGAGGGAAACGAAAG+GGG - Chr5:2011226-2011245 MsG0580024206.01.T01:three_prime_UTR 50.0%
ACGGAAATTGCGGGATTTGG+CGG + Chr5:2011377-2011396 None:intergenic 50.0%
ACTAAGTGGGGTCAGCTACA+TGG + Chr5:2013440-2013459 None:intergenic 50.0%
AGAACCCCTCAACCTACACT+AGG + Chr5:2012737-2012756 None:intergenic 50.0%
AGAGGCCGGATTGCAATGTT+TGG - Chr5:2012051-2012070 MsG0580024206.01.T01:three_prime_UTR 50.0%
AGCCAGCTTCAAATCCTTGC+AGG + Chr5:2018423-2018442 None:intergenic 50.0%
AGCGGTTGTAGGAGTGACTA+GGG + Chr5:2011719-2011738 None:intergenic 50.0%
ATAGGACGAGAAGCGGTTGT+AGG + Chr5:2011730-2011749 None:intergenic 50.0%
ATCGGCGAATACCAGCATTG+GGG - Chr5:2012347-2012366 MsG0580024206.01.T01:CDS 50.0%
ATGAGGAGGAGGAAGGATTG+TGG - Chr5:2012157-2012176 MsG0580024206.01.T01:three_prime_UTR 50.0%
ATGGGATGAAGGGTCTGCTA+GGG - Chr5:2012215-2012234 MsG0580024206.01.T01:exon 50.0%
ATGTAGCTGACCCCACTTAG+TGG - Chr5:2013439-2013458 MsG0580024206.01.T01:CDS 50.0%
CACTTGAGAAGGCTAACCCT+GGG + Chr5:2017728-2017747 None:intergenic 50.0%
CAGAACCTTCCATCTCAAGG+AGG - Chr5:2017638-2017657 MsG0580024206.01.T01:CDS 50.0%
CATCGGCGAATACCAGCATT+GGG - Chr5:2012346-2012365 MsG0580024206.01.T01:CDS 50.0%
CCACCAGAGGTTGCAATTTG+CGG + Chr5:2017497-2017516 None:intergenic 50.0%
CCATTGCAACTCAGATGCTG+CGG - Chr5:2012929-2012948 MsG0580024206.01.T01:CDS 50.0%
CTCCTTGAGATGGAAGGTTC+TGG + Chr5:2017640-2017659 None:intergenic 50.0%
GAAGCCTTAAGCTTGAAGGC+AGG - Chr5:2018250-2018269 MsG0580024206.01.T01:CDS 50.0%
GAAGGGAGATGGAGAGAAGA+AGG - Chr5:2012080-2012099 MsG0580024206.01.T01:three_prime_UTR 50.0%
GACTAAGCATGTCCCAGCAA+TGG + Chr5:2016462-2016481 None:intergenic 50.0%
GCATCTTTCACTCCCAGAGT+CGG - Chr5:2017793-2017812 MsG0580024206.01.T01:CDS 50.0%
GCCGGATTGCAATGTTTGGT+GGG - Chr5:2012055-2012074 MsG0580024206.01.T01:three_prime_UTR 50.0%
GCTCCTAAGACTGTTTGGCA+AGG + Chr5:2015020-2015039 None:intergenic 50.0%
GCTTGAAGGCAGGGTTAGAA+AGG - Chr5:2018260-2018279 MsG0580024206.01.T01:CDS 50.0%
GGAACAGCAGCTAGTACTAG+TGG + Chr5:2016811-2016830 None:intergenic 50.0%
GGATGAGAGGTTTGTCGATG+TGG - Chr5:2012119-2012138 MsG0580024206.01.T01:three_prime_UTR 50.0%
GGTTAGGGGGATTAGAGTAG+AGG - Chr5:2017273-2017292 MsG0580024206.01.T01:intron 50.0%
GTGGCTTATGTGCTGTCACT+TGG - Chr5:2017513-2017532 MsG0580024206.01.T01:CDS 50.0%
GTTTGTGATCCAGAGCCAGA+GGG - Chr5:2013024-2013043 MsG0580024206.01.T01:CDS 50.0%
TAAACCGGTGACGTCTGAAC+CGG - Chr5:2011804-2011823 MsG0580024206.01.T01:intron 50.0%
TACAGGCGTTTACAACCCTC+TGG + Chr5:2013042-2013061 None:intergenic 50.0%
TAGGGGAGTTCTTGGCTTAC+TGG - Chr5:2016172-2016191 MsG0580024206.01.T01:intron 50.0%
TCAAGCCATAGGTCCAGCAA+GGG + Chr5:2014705-2014724 None:intergenic 50.0%
TCACTTGAGAAGGCTAACCC+TGG + Chr5:2017729-2017748 None:intergenic 50.0%
TCGGCGAAGCTGAGAAGTTT+GGG + Chr5:2011481-2011500 None:intergenic 50.0%
TGAGAGGTTTGTCGATGTGG+TGG - Chr5:2012122-2012141 MsG0580024206.01.T01:three_prime_UTR 50.0%
TGAGGAGGAGGAAGGATTGT+GGG - Chr5:2012158-2012177 MsG0580024206.01.T01:three_prime_UTR 50.0%
TGGAAGTAATCATGGCGCTG+CGG - Chr5:2011999-2012018 MsG0580024206.01.T01:intron 50.0%
TGGACGAGGGGTTTCGTTAT+CGG + Chr5:2011518-2011537 None:intergenic 50.0%
TGTAGCTGACCCCACTTAGT+GGG - Chr5:2013440-2013459 MsG0580024206.01.T01:CDS 50.0%
TGTTTGTGATCCAGAGCCAG+AGG - Chr5:2013023-2013042 MsG0580024206.01.T01:CDS 50.0%
TTGTGTCCCCCACAAATGAC+AGG - Chr5:2013529-2013548 MsG0580024206.01.T01:intron 50.0%
TTTGGTGGGAAGAAGGGAGA+TGG - Chr5:2012069-2012088 MsG0580024206.01.T01:three_prime_UTR 50.0%
! GCTGCAATTTTTGCAGCGTC+TGG + Chr5:2016832-2016851 None:intergenic 50.0%
! TAGTGTAGGTTGAGGGGTTC+TGG - Chr5:2012736-2012755 MsG0580024206.01.T01:intron 50.0%
! TGAGAGTGATAGTGAGAGCC+AGG - Chr5:2015850-2015869 MsG0580024206.01.T01:intron 50.0%
! TGCCTGCAAGGATTTGAAGC+TGG - Chr5:2018418-2018437 MsG0580024206.01.T01:CDS 50.0%
! TGGCCTTGCCAAACAGTCTT+AGG - Chr5:2015014-2015033 MsG0580024206.01.T01:intron 50.0%
! TGTCGATGTGGTGGTTGATG+AGG - Chr5:2012131-2012150 MsG0580024206.01.T01:three_prime_UTR 50.0%
!! GGCTATTAGGGTTAGTTGGC+TGG - Chr5:2012842-2012861 MsG0580024206.01.T01:CDS 50.0%
!! TTAGGGTTAGTTGGCTGGGA+TGG - Chr5:2012847-2012866 MsG0580024206.01.T01:CDS 50.0%
AACTTGGGGGCTAATGGGGT+GGG - Chr5:2017215-2017234 MsG0580024206.01.T01:intron 55.0%
AAGTAATCATGGCGCTGCGG+AGG - Chr5:2012002-2012021 MsG0580024206.01.T01:intron 55.0%
ACTGCACCCCGAAAGTGAGA+TGG + Chr5:2017926-2017945 None:intergenic 55.0%
AGGAACCGGAGTATAGAGGC+CGG - Chr5:2012037-2012056 MsG0580024206.01.T01:three_prime_UTR 55.0%
AGGCTAAGAGGGAGAGGATG+CGG - Chr5:2011935-2011954 MsG0580024206.01.T01:intron 55.0%
AGGTGGGACCCACTTCACAA+GGG - Chr5:2016073-2016092 MsG0580024206.01.T01:intron 55.0%
AGTAATCATGGCGCTGCGGA+GGG - Chr5:2012003-2012022 MsG0580024206.01.T01:intron 55.0%
ATAATCGGGTGCAGCAGCAC+CGG + Chr5:2011965-2011984 None:intergenic 55.0%
ATCTCACTTTCGGGGTGCAG+TGG - Chr5:2017925-2017944 MsG0580024206.01.T01:CDS 55.0%
CAGCCGCAAATTGCAACCTC+TGG - Chr5:2017491-2017510 MsG0580024206.01.T01:CDS 55.0%
CAGCTAAGGCTAAGAGGGAG+AGG - Chr5:2011929-2011948 MsG0580024206.01.T01:intron 55.0%
CAGGAAAGGTGACAACGTGG+AGG - Chr5:2015604-2015623 MsG0580024206.01.T01:intron 55.0%
CCGCAAATTGCAACCTCTGG+TGG - Chr5:2017494-2017513 MsG0580024206.01.T01:CDS 55.0%
CCGCAGCATCTGAGTTGCAA+TGG + Chr5:2012932-2012951 None:intergenic 55.0%
CCTACTTGACACCTCCATCG+GGG - Chr5:2017252-2017271 MsG0580024206.01.T01:intron 55.0%
CTCAAGCCATAGGTCCAGCA+AGG + Chr5:2014706-2014725 None:intergenic 55.0%
CTCGCTGTGACTGATATGCC+TGG + Chr5:2015871-2015890 None:intergenic 55.0%
CTCTGTGATCCAGAGCCAGA+GGG - Chr5:2013125-2013144 MsG0580024206.01.T01:intron 55.0%
GAAATTGCGGGATTTGGCGG+AGG + Chr5:2011374-2011393 None:intergenic 55.0%
GACAGCACATAAGCCACCAG+AGG + Chr5:2017510-2017529 None:intergenic 55.0%
GACGAGGAACCGGAGTATAG+AGG - Chr5:2012033-2012052 MsG0580024206.01.T01:three_prime_UTR 55.0%
GATGAAGGGTCTGCTAGGGT+GGG - Chr5:2012219-2012238 MsG0580024206.01.T01:exon 55.0%
GATGGGATGAAGGGTCTGCT+AGG - Chr5:2012214-2012233 MsG0580024206.01.T01:exon 55.0%
GCAATCCGGCCTCTATACTC+CGG + Chr5:2012045-2012064 None:intergenic 55.0%
GCCAGCCCAAACGCCATATA+GGG + Chr5:2017040-2017059 None:intergenic 55.0%
GCCTACTTGACACCTCCATC+GGG - Chr5:2017251-2017270 MsG0580024206.01.T01:intron 55.0%
GCGAAGCTGAGAAGTTTGGG+TGG + Chr5:2011478-2011497 None:intergenic 55.0%
GCGACGGAAATTGCGGGATT+TGG + Chr5:2011380-2011399 None:intergenic 55.0%
GGCCAGAACCTTCCATCTCA+AGG - Chr5:2017635-2017654 MsG0580024206.01.T01:CDS 55.0%
GGCCGGATTGCAATGTTTGG+TGG - Chr5:2012054-2012073 MsG0580024206.01.T01:three_prime_UTR 55.0%
GGCCTACTTGACACCTCCAT+CGG - Chr5:2017250-2017269 MsG0580024206.01.T01:intron 55.0%
GGCGGTGGTGAAAGGTTGTT+TGG + Chr5:2011347-2011366 None:intergenic 55.0%
GTCGGCGAAGCTGAGAAGTT+TGG + Chr5:2011482-2011501 None:intergenic 55.0%
GTCGTCGTCGGAGTTAGTGT+CGG + Chr5:2011407-2011426 None:intergenic 55.0%
GTTTGGAAGGGACGGTGGTT+GGG + Chr5:2011432-2011451 None:intergenic 55.0%
TAACTTGGGGGCTAATGGGG+TGG - Chr5:2017214-2017233 MsG0580024206.01.T01:intron 55.0%
TAAGAGGGAGAGGATGCGGA+AGG - Chr5:2011939-2011958 MsG0580024206.01.T01:intron 55.0%
TCCCTATATGGCGTTTGGGC+TGG - Chr5:2017036-2017055 MsG0580024206.01.T01:intron 55.0%
TCTAATCCCCCTAACCCCGA+TGG + Chr5:2017269-2017288 None:intergenic 55.0%
TCTCACTTTCGGGGTGCAGT+GGG - Chr5:2017926-2017945 MsG0580024206.01.T01:CDS 55.0%
TCTCTGTGATCCAGAGCCAG+AGG - Chr5:2013124-2013143 MsG0580024206.01.T01:intron 55.0%
TGACACCTCCATCGGGGTTA+GGG - Chr5:2017258-2017277 MsG0580024206.01.T01:intron 55.0%
TGATGAGGAGGATGAGGAGG+AGG - Chr5:2012146-2012165 MsG0580024206.01.T01:three_prime_UTR 55.0%
TGCATCCTGAGCTGCACTTC+TGG + Chr5:2015633-2015652 None:intergenic 55.0%
TTGACACCTCCATCGGGGTT+AGG - Chr5:2017257-2017276 MsG0580024206.01.T01:intron 55.0%
TTTGGAAGGGACGGTGGTTG+GGG + Chr5:2011431-2011450 None:intergenic 55.0%
! CGTTTACAACCCTCTGGCTC+TGG + Chr5:2013036-2013055 None:intergenic 55.0%
! CTGGATCACAGAGAGTGCGT+GGG + Chr5:2013118-2013137 None:intergenic 55.0%
! GAGATGGAAGGTTCTGGCCA+TGG + Chr5:2017634-2017653 None:intergenic 55.0%
! GCATCGGCGAATACCAGCAT+TGG - Chr5:2012345-2012364 MsG0580024206.01.T01:CDS 55.0%
! GGTTGAGGGGTTCTGGCAAT+TGG - Chr5:2012743-2012762 MsG0580024206.01.T01:intron 55.0%
! TCGGCGAATACCAGCATTGG+GGG - Chr5:2012348-2012367 MsG0580024206.01.T01:CDS 55.0%
! TCTGGATCACAGAGAGTGCG+TGG + Chr5:2013119-2013138 None:intergenic 55.0%
!! ACAGCGAGATTTGGTGCTGC+AGG - Chr5:2015883-2015902 MsG0580024206.01.T01:intron 55.0%
!! AGTTAGTGTCGGTACGGCGA+CGG + Chr5:2011396-2011415 None:intergenic 55.0%
!! ATCGGCGTCGATTTCGTCGT+CGG + Chr5:2011500-2011519 None:intergenic 55.0%
!! CGATGTGGTGGTTGATGAGG+AGG - Chr5:2012134-2012153 MsG0580024206.01.T01:three_prime_UTR 55.0%
!! CGTCGGAGTTAGTGTCGGTA+CGG + Chr5:2011402-2011421 None:intergenic 55.0%
!! GGTGGTTGATGAGGAGGATG+AGG - Chr5:2012140-2012159 MsG0580024206.01.T01:three_prime_UTR 55.0%
!! GGTTGATGAGGAGGATGAGG+AGG - Chr5:2012143-2012162 MsG0580024206.01.T01:three_prime_UTR 55.0%
AATCCCCCTAACCCCGATGG+AGG + Chr5:2017266-2017285 None:intergenic 60.0%
ACACCTCCATCGGGGTTAGG+GGG - Chr5:2017260-2017279 MsG0580024206.01.T01:intron 60.0%
AGGTTTAGGGGCGGAGGGTT+TGG + Chr5:2011449-2011468 None:intergenic 60.0%
ATGTTGGGGAGTTCGGCCCA+GGG - Chr5:2017709-2017728 MsG0580024206.01.T01:CDS 60.0%
CGGTACGGCGACGGAAATTG+CGG + Chr5:2011387-2011406 None:intergenic 60.0%
GACACCTCCATCGGGGTTAG+GGG - Chr5:2017259-2017278 MsG0580024206.01.T01:intron 60.0%
GACTCCGGTTCAGACGTCAC+CGG + Chr5:2011811-2011830 None:intergenic 60.0%
GAGGACATGGCGGTGGTGAA+AGG + Chr5:2011355-2011374 None:intergenic 60.0%
GAGGAGGATGAGGAGGAGGA+AGG - Chr5:2012150-2012169 MsG0580024206.01.T01:three_prime_UTR 60.0%
GAGGTGGGACCCACTTCACA+AGG - Chr5:2016072-2016091 MsG0580024206.01.T01:intron 60.0%
GGATGAAGGGTCTGCTAGGG+TGG - Chr5:2012218-2012237 MsG0580024206.01.T01:exon 60.0%
GGATTTGGCGGAGGACATGG+CGG + Chr5:2011365-2011384 None:intergenic 60.0%
GGCCAGCCCAAACGCCATAT+AGG + Chr5:2017041-2017060 None:intergenic 60.0%
GGGGTTGAGTGACGAGGAAC+CGG - Chr5:2012023-2012042 MsG0580024206.01.T01:three_prime_UTR 60.0%
GGTACGGCGACGGAAATTGC+GGG + Chr5:2011386-2011405 None:intergenic 60.0%
GGTTTGGAAGGGACGGTGGT+TGG + Chr5:2011433-2011452 None:intergenic 60.0%
GTAATCATGGCGCTGCGGAG+GGG - Chr5:2012004-2012023 MsG0580024206.01.T01:intron 60.0%
GTGGCTGGGATTTGCCTGCA+AGG - Chr5:2018406-2018425 MsG0580024206.01.T01:CDS 60.0%
TAGGGGCGGAGGGTTTGGAA+GGG + Chr5:2011444-2011463 None:intergenic 60.0%
TATGTTGGGGAGTTCGGCCC+AGG - Chr5:2017708-2017727 MsG0580024206.01.T01:CDS 60.0%
TGGGATTGCTCCCCCAATGC+TGG + Chr5:2012361-2012380 None:intergenic 60.0%
TGTGAAGTGGGTCCCACCTC+AGG + Chr5:2016072-2016091 None:intergenic 60.0%
TTAGGGGCGGAGGGTTTGGA+AGG + Chr5:2011445-2011464 None:intergenic 60.0%
! AAGAAGAGGGTTTGGGGCGG+TGG + Chr5:2011561-2011580 None:intergenic 60.0%
! GAAGGTTCTGGCCATGGTCC+TGG + Chr5:2017628-2017647 None:intergenic 60.0%
! GTTTGGAGGAGCGTGGACGA+GGG + Chr5:2011531-2011550 None:intergenic 60.0%
! TTTGGAGGAGCGTGGACGAG+GGG + Chr5:2011530-2011549 None:intergenic 60.0%
!! CCCCGATGGAGGTGTCAAGT+AGG + Chr5:2017255-2017274 None:intergenic 60.0%
AGGGAGAGGATGCGGAAGGC+CGG - Chr5:2011943-2011962 MsG0580024206.01.T01:intron 65.0%
CTGAGGCTCGTCAACGCAGG+AGG - Chr5:2015750-2015769 MsG0580024206.01.T01:intron 65.0%
GAAGGGTCTGCTAGGGTGGG+TGG - Chr5:2012222-2012241 MsG0580024206.01.T01:exon 65.0%
GCGGGATTTGGCGGAGGACA+TGG + Chr5:2011368-2011387 None:intergenic 65.0%
GGAGGGTTTGGAAGGGACGG+TGG + Chr5:2011437-2011456 None:intergenic 65.0%
GGCGGAGGGTTTGGAAGGGA+CGG + Chr5:2011440-2011459 None:intergenic 65.0%
TGCGGAGGGGTTGAGTGACG+AGG - Chr5:2012017-2012036 MsG0580024206.01.T01:three_prime_UTR 65.0%
TGGCTGAGGCTCGTCAACGC+AGG - Chr5:2015747-2015766 MsG0580024206.01.T01:intron 65.0%
TGGTGGGGTTTGGAGGAGCG+TGG + Chr5:2011538-2011557 None:intergenic 65.0%
TTTGGCGGAGGACATGGCGG+TGG + Chr5:2011362-2011381 None:intergenic 65.0%
! AAGAGGGTTTGGGGCGGTGG+TGG + Chr5:2011558-2011577 None:intergenic 65.0%
! GGCTGCCAGAAGTGCAGCTC+AGG - Chr5:2015625-2015644 MsG0580024206.01.T01:intron 65.0%
! GGTTTGGAGGAGCGTGGACG+AGG + Chr5:2011532-2011551 None:intergenic 65.0%
! TCTGCTAGGGTGGGTGGTGG+TGG - Chr5:2012228-2012247 MsG0580024206.01.T01:exon 65.0%
!! GGTGGTTGGGGTGTCGTCGT+CGG + Chr5:2011419-2011438 None:intergenic 65.0%
!! TGGGCTGGCCCAAGTGTCAC+TGG - Chr5:2017051-2017070 MsG0580024206.01.T01:intron 65.0%
GGGTCTGCTAGGGTGGGTGG+TGG - Chr5:2012225-2012244 MsG0580024206.01.T01:exon 70.0%
! AGGGTTTGGGGCGGTGGTGG+TGG + Chr5:2011555-2011574 None:intergenic 70.0%
! GGGTTTGGGGCGGTGGTGGT+GGG + Chr5:2011554-2011573 None:intergenic 70.0%
! GGTTTGGGGCGGTGGTGGTG+GGG + Chr5:2011553-2011572 None:intergenic 70.0%
!! GCGGTGGTGGTGGGGTTTGG+AGG + Chr5:2011545-2011564 None:intergenic 70.0%
!! GGGGCGGTGGTGGTGGGGTT+TGG + Chr5:2011548-2011567 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 2011226 2018673 2011226 ID=MsG0580024206.01;Name=MsG0580024206.01
Chr5 mRNA 2011226 2018673 2011226 ID=MsG0580024206.01.T01;Parent=MsG0580024206.01;Name=MsG0580024206.01.T01;_AED=0.29;_eAED=0.29;_QI=141|0.83|0.71|1|0.83|0.71|7|543|850
Chr5 exon 2011226 2011548 2011226 ID=MsG0580024206.01.T01:exon:23631;Parent=MsG0580024206.01.T01
Chr5 exon 2012011 2012405 2012011 ID=MsG0580024206.01.T01:exon:23630;Parent=MsG0580024206.01.T01
Chr5 exon 2012817 2013106 2012817 ID=MsG0580024206.01.T01:exon:23629;Parent=MsG0580024206.01.T01
Chr5 exon 2013287 2013532 2013287 ID=MsG0580024206.01.T01:exon:23628;Parent=MsG0580024206.01.T01
Chr5 exon 2013875 2014447 2013875 ID=MsG0580024206.01.T01:exon:23627;Parent=MsG0580024206.01.T01
Chr5 exon 2016181 2016348 2016181 ID=MsG0580024206.01.T01:exon:23626;Parent=MsG0580024206.01.T01
Chr5 exon 2017432 2018673 2017432 ID=MsG0580024206.01.T01:exon:23625;Parent=MsG0580024206.01.T01
Chr5 five_prime_UTR 2018533 2018673 2018533 ID=MsG0580024206.01.T01:five_prime_utr;Parent=MsG0580024206.01.T01
Chr5 CDS 2017432 2018532 2017432 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 CDS 2016181 2016348 2016181 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 CDS 2013875 2014447 2013875 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 CDS 2013287 2013532 2013287 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 CDS 2012817 2013106 2012817 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 CDS 2012231 2012405 2012231 ID=MsG0580024206.01.T01:cds;Parent=MsG0580024206.01.T01
Chr5 three_prime_UTR 2012011 2012230 2012011 ID=MsG0580024206.01.T01:three_prime_utr;Parent=MsG0580024206.01.T01
Chr5 three_prime_UTR 2011226 2011548 2011226 ID=MsG0580024206.01.T01:three_prime_utr;Parent=MsG0580024206.01.T01
Gene Sequence

>MsG0580024206.01.T01

ATGTCCTCCGCCAAATCCCGCAATTTCCGTCGCCGTACCGACACTAACTCCGACGACGACACCCCAACCACCGTCCCTTCCAAACCCTCCGCCCCTAAACCTAAAAAACCACCCAAACTTCTCAGCTTCGCCGACGACGAAATCGACGCCGATAACGAAACCCCTCGTCCACGCTCCTCCAAACCCCACCACCACCGCCCCAAACCCTCTTCTTCTTCCTCTCACAAAATCACCACTCACAAAAACAGAATAGTTTCACATTCTCCTTCACCTTCACCTTCCAATGTTCAACCTCAAGCTGGTACCTACACCTTAGAAGCACTTCGTGAGCTTCAGAAGAATACAAGAACCCTAGTCACTCCTACAACCGCTTCTCGTCCTATTTCATCTGAACCCAAACCTTCTTCTGAACCGGTTATTGTTTTAAAGGGTTTGCTTAAACCGGTGACGTCTGAACCGGAGTCAGATTCTGAAGAAAACGGGGAATTTGAAGCGAGATTTGCTTCTGTTGGGATTAAAAATGGGAAAGATTCGTTTTTTCCTGGTGAAGAGGATATTAAAGCAGCTAAGGCTAAGAGGGAGAGGATGCGGAAGGCCGGTGCTGCTGCACCCGATTATATTTCGTTGGATGGTGGAAGTAATCATGGCGCTGCGGAGGGGTTGAGTGACGAGGAACCGGAGTATAGAGGCCGGATTGCAATGTTTGGTGGGAAGAAGGGAGATGGAGAGAAGAAGGGTGTTTTTGAGGTTGCGGATGAGAGGTTTGTCGATGTGGTGGTTGATGAGGAGGATGAGGAGGAGGAAGGATTGTGGGAAGAAGAGCAGTTTAAGAAAGGATTGGTGAAGAGATGGGATGAAGGGTCTGCTAGGGTGGGTGGTGGTGGTGATGTTCCTGTTGTGCAAGTTGCTCAACAGCCCAATTTTGTTGGTCCTTCTGTTGCAAATGTGTATGGTGCAGTCCCAAATGTTGTAGCAGCAGCATCGGCGAATACCAGCATTGGGGGAGCAATCCCAGCAACACCGATTTTGGATGTCATTCCTATATCTCAACAAGCTGAGATTGCAAAAAAAGCTATGCTGGACAATGTTAGGAGGCTTAAGGAATCACATGGAAGAACAATGTCATCATTGATCAAAACAGATGAAAATTTGTCTGCCTCCCTTTTGAAGATTACCGATCTTGAAAACTCATTAGTGGTAGCTGACGAGAAGTACAGATTTATGCAAAAGCTCCGAAATTATATCTCAAATATATGCGACTTTTTACAGCATAAAGCTTACTACATTGAAGAACTTGAAGATCAGATGAAGAAGCTTCACGAAGATCGAGCATCAGCCATTTTCGAAAAAAGAGCCACTAACAATGACGACGAAATGGTTGAGGTAGAAGCAGCTGTGAAAGCTGCAATGTCAGTTTTAAGCAGGAAAGGTGACAACGTGGAGGCTGCCAGAAGTGCAGCTCAGGATGCATTTGCTGCTGTCAGAAAACAAAGAGATTTTCCAGTGCAGTTAGATGAGTTTGGTAGAGATTTAAATCTTGAGAAACGGAAGAAAATGAAAGTGATGGCTGAGGCTCGTCAACGCAGGAGGTCTAAAGCTTTTGATTCTAAAAAGTCGGCATCCATGGAAATAGATGATCATAAAGTAGAGGGTGAATCAAGCACTGATGAGAGTGATAGTGAGAGCCAGGCATATCAGTCACAGCGAGATTTGGTGCTGCAGGCTGCCGATGAGATTTTCAGTGATGCTTCTGAGGAATATAGTCAATTATCCCTGGTCAAAACAAGAATGGAAGAATGGAAAAGAGAGTATTCGTCAAGCTATAATGATGCTTATATTTCCGATTTTGTTCATCATGATGGAGATGCTGACCTTGAGCTTGTCCCAAATTTGGTGGAAAAGGTTGCACTTCCTATTCTCCATTATGAAGTTTCCCATTGCTGGGACATGCTTAGTCAACAAGAGACAATGAATGCTATTGCTGCTACAAAGTTGATTGTGCAGCATGTGTCTCATAAAAGTGAAGCCCTTGCAGATCTGCTAGTTTCGATTCGTACACGTCTAGCTGATGCTGTTGCTAAACTTACGGTCCCTACATGGAGTCCACTAGTACTAGCTGCTGTTCCAGACGCTGCAAAAATTGCAGCATATCGATTTGGTGTGTCTGTTCGACTACTGAGAAATATTTGCCTTTGGAAGGACATATTTGCAATGTCAGTGTTAGAGAAGCTTGCTCTAGATGAGCTTTTGTACGCAAAAGTTCTACCTCACTTTAGAAGCATATCAGAAAATGTTCAAGATGCAATAACAAGAACAGAACGGATTATTGATTCCCTATATGGCGTTTGGGCTGGCCCAAGTGTCACTGGAGACAAAAACCGCAAATTGCAACCTCTGGTGGCTTATGTGCTGTCACTTGGAAAGATTCTGGAGAGAAGAAATGTACAGGAGAGTGATCTAGCTCGTCGATTAAAGAGAATACTTGTTGACCTCAATGAATATGATCATGCCAGGACCATGGCCAGAACCTTCCATCTCAAGGAGGCATTATGA
Protein sequence

>MsG0580024206.01.T01

MSSAKSRNFRRRTDTNSDDDTPTTVPSKPSAPKPKKPPKLLSFADDEIDADNETPRPRSSKPHHHRPKPSSSSSHKITTHKNRIVSHSPSPSPSNVQPQAGTYTLEALRELQKNTRTLVTPTTASRPISSEPKPSSEPVIVLKGLLKPVTSEPESDSEENGEFEARFASVGIKNGKDSFFPGEEDIKAAKAKRERMRKAGAAAPDYISLDGGSNHGAAEGLSDEEPEYRGRIAMFGGKKGDGEKKGVFEVADERFVDVVVDEEDEEEEGLWEEEQFKKGLVKRWDEGSARVGGGGDVPVVQVAQQPNFVGPSVANVYGAVPNVVAAASANTSIGGAIPATPILDVIPISQQAEIAKKAMLDNVRRLKESHGRTMSSLIKTDENLSASLLKITDLENSLVVADEKYRFMQKLRNYISNICDFLQHKAYYIEELEDQMKKLHEDRASAIFEKRATNNDDEMVEVEAAVKAAMSVLSRKGDNVEAARSAAQDAFAAVRKQRDFPVQLDEFGRDLNLEKRKKMKVMAEARQRRRSKAFDSKKSASMEIDDHKVEGESSTDESDSESQAYQSQRDLVLQAADEIFSDASEEYSQLSLVKTRMEEWKREYSSSYNDAYISDFVHHDGDADLELVPNLVEKVALPILHYEVSHCWDMLSQQETMNAIAATKLIVQHVSHKSEALADLLVSIRTRLADAVAKLTVPTWSPLVLAAVPDAAKIAAYRFGVSVRLLRNICLWKDIFAMSVLEKLALDELLYAKVLPHFRSISENVQDAITRTERIIDSLYGVWAGPSVTGDKNRKLQPLVAYVLSLGKILERRNVQESDLARRLKRILVDLNEYDHARTMARTFHLKEAL*