AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024590.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024590.01.T01 MTR_5g013530 87.943 141 14 1 1 138 1 141 1.16e-88 258
MsG0580024590.01.T01 MTR_5g013530 88.636 44 5 0 146 189 27 70 7.53e-21 85.1
MsG0580024590.01.T01 MTR_5g013530 86.726 113 12 1 29 138 7 119 6.90e-66 199
MsG0580024590.01.T01 MTR_5g013530 92.683 41 3 0 149 189 8 48 1.56e-20 84.0
MsG0580024590.01.T01 MTR_5g013520 92.079 101 8 0 30 130 1 101 3.06e-65 197
MsG0580024590.01.T01 MTR_5g013520 90.244 41 4 0 149 189 1 41 2.42e-20 83.2
MsG0580024590.01.T01 MTR_5g013515 67.797 118 27 4 31 138 1 117 1.80e-47 152
MsG0580024590.01.T01 MTR_5g013515 72.500 40 11 0 150 189 1 40 3.33e-15 69.7
MsG0580024590.01.T01 MTR_2g042900 40.876 137 41 4 25 130 99 226 1.40e-23 94.4
MsG0580024590.01.T01 MTR_2g042900 33.533 167 41 5 25 130 99 256 7.68e-18 79.3
MsG0580024590.01.T01 MTR_4g124960 34.586 133 48 5 5 132 73 171 3.60e-14 67.8
MsG0580024590.01.T01 MTR_4g124960 34.074 135 50 5 5 134 73 173 1.26e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024590.01.T01 AT1G74950 41.818 110 48 2 37 130 112 221 2.41e-19 82.4
MsG0580024590.01.T01 AT1G74950 41.818 110 48 2 37 130 112 221 3.47e-19 82.8
MsG0580024590.01.T01 AT1G19180 41.176 102 51 3 37 130 53 153 6.85e-18 77.8
MsG0580024590.01.T01 AT1G19180 41.176 102 51 3 37 130 119 219 3.35e-17 77.4
MsG0580024590.01.T01 AT1G19180 41.176 102 51 3 37 130 119 219 3.35e-17 77.4
MsG0580024590.01.T01 AT3G43440 29.530 149 62 3 44 187 45 155 8.62e-15 70.5
MsG0580024590.01.T01 AT5G20900 32.576 132 61 5 24 130 28 156 5.82e-13 64.7

Find 31 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACAAGAGATTCCTATTT+TGG 0.046444 5:+6664107 MsG0580024590.01.T01:CDS
CCATCTATACCTGTTATTTA+TGG 0.164541 5:+6664507 MsG0580024590.01.T01:CDS
AGCTTCACTTCATCGGTTCT+TGG 0.292747 5:+6664653 MsG0580024590.01.T01:CDS
CTTCAAATATTTACTTTACA+TGG 0.308367 5:+6667356 MsG0580024590.01.T01:CDS
CCAAAATAGGAATCTCTTGT+AGG 0.331403 5:-6664107 None:intergenic
TACCTGGAGTTTCCCAAAAT+AGG 0.395618 5:-6664120 None:intergenic
GGAAAAGTCCATGATGTCTT+TGG 0.398667 5:-6664388 None:intergenic
GGAAGTTGTTGAAAATTCAT+AGG 0.405668 5:-6664075 None:intergenic
AGTGAAGCTTTCCTCGTCAT+TGG 0.416178 5:-6664639 None:intergenic
ATGTCTTTGGCTTTATCAGC+TGG 0.417227 5:-6669744 None:intergenic
CAAATGACAATCTTCTATGA+TGG 0.453411 5:+6664327 MsG0580024590.01.T01:CDS
CAAATGACAATCTTCTATGA+TGG 0.453411 5:+6669696 MsG0580024590.01.T01:CDS
TGAAGTACTAGTAATTCCTT+TGG 0.455465 5:-6669782 None:intergenic
TTCATCGGTTCTTGGAGAAA+AGG 0.463618 5:+6664661 MsG0580024590.01.T01:CDS
CCATAAATAACAGGTATAGA+TGG 0.477854 5:-6664507 None:intergenic
AGTACTAGTAATTCCTTTGG+TGG 0.499055 5:-6669779 None:intergenic
AATGAAGGCTAATGTTAAGA+AGG 0.511094 5:+6664287 MsG0580024590.01.T01:CDS
AATGAAGGCTAATGTTAAGA+AGG 0.511094 5:+6669656 MsG0580024590.01.T01:CDS
CGAGGAAAGCTTCACTTCAT+CGG 0.519369 5:+6664646 MsG0580024590.01.T01:CDS
AGTAAGCATAGTTGTTGTTG+TGG 0.527440 5:-6664440 None:intergenic
TTCAAATATTTACTTTACAT+GGG 0.529088 5:+6667357 MsG0580024590.01.T01:CDS
AAATGACAATCTTCTATGAT+GGG 0.538308 5:+6664328 MsG0580024590.01.T01:CDS
AAATGACAATCTTCTATGAT+GGG 0.538308 5:+6669697 MsG0580024590.01.T01:CDS
ATCTCTTGTAGGAAGAGATG+AGG 0.564072 5:-6664096 None:intergenic
TCTTGGAGAAAAGGAAGGAT+AGG 0.567398 5:+6664670 MsG0580024590.01.T01:CDS
GGCTAATGTTAAGAAGGAAG+AGG 0.580916 5:+6664293 MsG0580024590.01.T01:CDS
GGCTAATGTTAAGAAGGAAG+AGG 0.580916 5:+6669662 MsG0580024590.01.T01:CDS
TGATAAAGCCAAAGACATCA+TGG 0.585378 5:+6669749 MsG0580024590.01.T01:CDS
TCGGTTCTTGGAGAAAAGGA+AGG 0.585705 5:+6664665 MsG0580024590.01.T01:CDS
ATTCAGATTTACCAATGACG+AGG 0.687022 5:+6664628 MsG0580024590.01.T01:intron
TTACATGGGAGCTTAATCCA+CGG 0.689325 5:+6667371 MsG0580024590.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGTTAAAATACTTAT+AGG - Chr5:6666906-6666925 None:intergenic 10.0%
!! AAAAATTCATATTTAATTCA+TGG + Chr5:6667102-6667121 MsG0580024590.01.T01:intron 10.0%
!! ATAAATATTATGTTAGAAAA+AGG + Chr5:6668254-6668273 MsG0580024590.01.T01:intron 10.0%
!!! AAAATTGATTTTGAATAAAT+TGG - Chr5:6665027-6665046 None:intergenic 10.0%
!!! ACTATGTTAATATTTTATTA+AGG - Chr5:6667558-6667577 None:intergenic 10.0%
!!! TTATTTATGGTAATTTTTTT+TGG + Chr5:6664520-6664539 MsG0580024590.01.T01:intron 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - Chr5:6668239-6668258 None:intergenic 10.0%
!! AAAAAATTACCATAAATAAC+AGG - Chr5:6664519-6664538 None:intergenic 15.0%
!! AACATAACTTATTACTAAAA+AGG + Chr5:6668175-6668194 MsG0580024590.01.T01:intron 15.0%
!! ACTATACTTTATAAATATCA+GGG - Chr5:6668337-6668356 None:intergenic 15.0%
!! CCTTAAATAAAAAAAGTTAA+GGG + Chr5:6666674-6666693 MsG0580024590.01.T01:intron 15.0%
!! GAAAATAAAATTAGTAAGTT+TGG + Chr5:6664783-6664802 MsG0580024590.01.T01:intron 15.0%
!! TAAAGAAATAAAAAACTAGA+CGG - Chr5:6665907-6665926 None:intergenic 15.0%
!! TACTCTATAAATATAGTATA+TGG + Chr5:6668633-6668652 MsG0580024590.01.T01:intron 15.0%
!! TATTTACATGACTATTTATT+GGG + Chr5:6665452-6665471 MsG0580024590.01.T01:intron 15.0%
!! TTATTTACATGACTATTTAT+TGG + Chr5:6665451-6665470 MsG0580024590.01.T01:intron 15.0%
!! TTCAAATATTTACTTTACAT+GGG + Chr5:6667357-6667376 MsG0580024590.01.T01:CDS 15.0%
!!! ATAACCATATTAATTTTTAG+AGG - Chr5:6668116-6668135 None:intergenic 15.0%
!!! ATTTTAAATTCACAAATCAA+TGG + Chr5:6668713-6668732 MsG0580024590.01.T01:intron 15.0%
!!! CCTTAACTTTTTTTATTTAA+GGG - Chr5:6666676-6666695 None:intergenic 15.0%
!!! TAATGGAATATTTCTATTTT+TGG + Chr5:6666814-6666833 MsG0580024590.01.T01:intron 15.0%
!!! TAGTTTTTTTTTTTTTGCAA+AGG - Chr5:6665704-6665723 None:intergenic 15.0%
!!! TTAGAAAAAGGTATTTTTAA+AGG + Chr5:6668266-6668285 MsG0580024590.01.T01:intron 15.0%
!!! TTATAAGTTTTAAGATTCAA+TGG - Chr5:6668430-6668449 None:intergenic 15.0%
!!! TTTGTGAATTTAAAATTTAG+TGG - Chr5:6668709-6668728 None:intergenic 15.0%
!! AAATCCTAGAAAGAATAAAT+TGG - Chr5:6667522-6667541 None:intergenic 20.0%
!! AATCCTAGAAAGAATAAATT+GGG - Chr5:6667521-6667540 None:intergenic 20.0%
!! AGAAATCCAAAGTTATTATT+CGG + Chr5:6668979-6668998 MsG0580024590.01.T01:intron 20.0%
!! ATAATCATATTTAACCTTTC+GGG - Chr5:6666879-6666898 None:intergenic 20.0%
!! ATCGAAAAAATTATGATAAG+TGG - Chr5:6665870-6665889 None:intergenic 20.0%
!! CACTATACTTTATAAATATC+AGG - Chr5:6668338-6668357 None:intergenic 20.0%
!! CATAATCATATTTAACCTTT+CGG - Chr5:6666880-6666899 None:intergenic 20.0%
!! CCCTTAAATAAAAAAAGTTA+AGG + Chr5:6666673-6666692 MsG0580024590.01.T01:intron 20.0%
!! CTTCAAATATTTACTTTACA+TGG + Chr5:6667356-6667375 MsG0580024590.01.T01:CDS 20.0%
!! TTAAAACAGGATATTTATCA+GGG + Chr5:6668026-6668045 MsG0580024590.01.T01:intron 20.0%
!! TTATAAACTTACATGTTGTT+TGG + Chr5:6666132-6666151 MsG0580024590.01.T01:intron 20.0%
!! TTTCTTTCATTACATTTGTT+TGG + Chr5:6666217-6666236 MsG0580024590.01.T01:intron 20.0%
!!! AAAGCCTCTAAAAATTAATA+TGG + Chr5:6668109-6668128 MsG0580024590.01.T01:intron 20.0%
!!! AGAAGTTTTTTATATCTGTT+GGG - Chr5:6669350-6669369 None:intergenic 20.0%
!!! ATGTTTACATTTTTAGACAT+GGG + Chr5:6667323-6667342 MsG0580024590.01.T01:intron 20.0%
!!! ATTATTTTTAATGTTAGTCG+AGG - Chr5:6668913-6668932 None:intergenic 20.0%
!!! ATTTTATTAAGGTTGATCAT+CGG - Chr5:6667547-6667566 None:intergenic 20.0%
!!! CAAATGTAGAAACTTTTTAT+TGG + Chr5:6666736-6666755 MsG0580024590.01.T01:intron 20.0%
!!! CACATTAAAATTTTTGCTTT+AGG + Chr5:6668290-6668309 MsG0580024590.01.T01:intron 20.0%
!!! CAGTTTTATGAATTCTAAAA+TGG + Chr5:6667925-6667944 MsG0580024590.01.T01:intron 20.0%
!!! CCCTTAACTTTTTTTATTTA+AGG - Chr5:6666677-6666696 None:intergenic 20.0%
!!! CTAAAGCAAAAATTTTAATG+TGG - Chr5:6668292-6668311 None:intergenic 20.0%
!!! GTTAATAAACTTCACTTTTT+GGG + Chr5:6664736-6664755 MsG0580024590.01.T01:intron 20.0%
!!! TAGAAGTTTTTTATATCTGT+TGG - Chr5:6669351-6669370 None:intergenic 20.0%
!!! TATGTTTACATTTTTAGACA+TGG + Chr5:6667322-6667341 MsG0580024590.01.T01:intron 20.0%
!!! TGATATTTTGACAATCATTT+TGG - Chr5:6668612-6668631 None:intergenic 20.0%
!!! TGTTAATAAACTTCACTTTT+TGG + Chr5:6664735-6664754 MsG0580024590.01.T01:intron 20.0%
!!! TTAATAAACTTCACTTTTTG+GGG + Chr5:6664737-6664756 MsG0580024590.01.T01:intron 20.0%
!!! TTGAATAAAATGACTTGTTT+TGG - Chr5:6669155-6669174 None:intergenic 20.0%
!!! TTTTTTTTTTTTTGCAAAGG+TGG - Chr5:6665701-6665720 None:intergenic 20.0%
! AAAACAATAGAGAGAGAAAA+AGG - Chr5:6668544-6668563 None:intergenic 25.0%
! AAAACAGTTAAAGTAACACA+TGG - Chr5:6665246-6665265 None:intergenic 25.0%
! AAACAGTTAAAGTAACACAT+GGG - Chr5:6665245-6665264 None:intergenic 25.0%
! AAACATGTCAAAATCAATCT+TGG - Chr5:6664826-6664845 None:intergenic 25.0%
! AAACCCAATTTATTCTTTCT+AGG + Chr5:6667515-6667534 MsG0580024590.01.T01:intron 25.0%
! AAATGACAATCTTCTATGAT+GGG + Chr5:6664328-6664347 MsG0580024590.01.T01:CDS 25.0%
! AATCAATGGTTGCAAATATA+TGG + Chr5:6668727-6668746 MsG0580024590.01.T01:intron 25.0%
! AATGTACAGTGATTTATGTT+TGG - Chr5:6664967-6664986 None:intergenic 25.0%
! AATTTAATGCAAATTGACCA+TGG - Chr5:6664239-6664258 None:intergenic 25.0%
! AGAAAAATTATTTCCATTGC+CGG - Chr5:6666092-6666111 None:intergenic 25.0%
! ATAAATAACACATGCTGATA+TGG + Chr5:6669118-6669137 MsG0580024590.01.T01:intron 25.0%
! ATCGAAAAAAAAAGACATTG+AGG - Chr5:6665500-6665519 None:intergenic 25.0%
! ATGATGTGTCAAATAGATAA+TGG - Chr5:6667203-6667222 None:intergenic 25.0%
! ATTCAATAAGGAAAATCGAA+TGG + Chr5:6665583-6665602 MsG0580024590.01.T01:intron 25.0%
! ATTGAATTGAACTGGTATAA+AGG + Chr5:6665641-6665660 MsG0580024590.01.T01:intron 25.0%
! CAAAATAAATTACTACCTCA+AGG - Chr5:6667254-6667273 None:intergenic 25.0%
! CATACTAGTAGTATATAACA+TGG + Chr5:6664219-6664238 MsG0580024590.01.T01:intron 25.0%
! CGAAAGGTTAAATATGATTA+TGG + Chr5:6666878-6666897 MsG0580024590.01.T01:intron 25.0%
! CTTAAAACAGGATATTTATC+AGG + Chr5:6668025-6668044 MsG0580024590.01.T01:intron 25.0%
! GAATGGAAAGAAAAAACAAA+GGG + Chr5:6665600-6665619 MsG0580024590.01.T01:intron 25.0%
! GGTAAATAGTATAGATTTGT+TGG - Chr5:6668379-6668398 None:intergenic 25.0%
! GTGAAAATTTAGTGTTAACT+TGG - Chr5:6667676-6667695 None:intergenic 25.0%
! GTTGAATGCACAAATATTAA+TGG + Chr5:6666797-6666816 MsG0580024590.01.T01:intron 25.0%
! TAAATAACACATGCTGATAT+GGG + Chr5:6669119-6669138 MsG0580024590.01.T01:intron 25.0%
! TAGAAAGAATAAATTGGGTT+TGG - Chr5:6667516-6667535 None:intergenic 25.0%
! TATAAAATTATTTCCGTTGC+CGG - Chr5:6666010-6666029 None:intergenic 25.0%
! TATACATATTGTGATTGTTG+TGG + Chr5:6665359-6665378 MsG0580024590.01.T01:intron 25.0%
! TGAAAAGAAGAGCAAAAAAT+AGG - Chr5:6666965-6666984 None:intergenic 25.0%
! TTATCTATTTGACACATCAT+CGG + Chr5:6667203-6667222 MsG0580024590.01.T01:intron 25.0%
! TTCATCTCAAAATATCTCTT+GGG - Chr5:6669046-6669065 None:intergenic 25.0%
! TTGGTAAAATTGAATTGAAC+TGG + Chr5:6665633-6665652 MsG0580024590.01.T01:intron 25.0%
! TTTCATCTCAAAATATCTCT+TGG - Chr5:6669047-6669066 None:intergenic 25.0%
! TTTGTTCCGAATAATAACTT+TGG - Chr5:6668988-6669007 None:intergenic 25.0%
!! AATTTTCACATAAAAACTCC+CGG + Chr5:6667687-6667706 MsG0580024590.01.T01:intron 25.0%
!! ATACATACTTTTGTGAGAAT+AGG - Chr5:6665342-6665361 None:intergenic 25.0%
!! ATTGGTTTATTAATGCTTCT+TGG - Chr5:6665148-6665167 None:intergenic 25.0%
!! GATATTTTGTACAACCATTT+TGG + Chr5:6668461-6668480 MsG0580024590.01.T01:intron 25.0%
!! TATTAAAGTGTCTATTGCTA+AGG + Chr5:6667742-6667761 MsG0580024590.01.T01:intron 25.0%
!! TCAATGGATATGATTTTGTA+AGG - Chr5:6668414-6668433 None:intergenic 25.0%
!! TGGATATTTTATGTTTGAGA+GGG + Chr5:6664540-6664559 MsG0580024590.01.T01:intron 25.0%
!! TTGGATATTTTATGTTTGAG+AGG + Chr5:6664539-6664558 MsG0580024590.01.T01:intron 25.0%
!!! AAAATGACTTGTTTTGGTTT+TGG - Chr5:6669149-6669168 None:intergenic 25.0%
!!! AATAAAGTTTTATGTTGTGG+AGG - Chr5:6665530-6665549 None:intergenic 25.0%
!!! ACAAGTAGTACACTTTTTTT+AGG - Chr5:6665431-6665450 None:intergenic 25.0%
!!! AGAGATATTTTGAGATGAAA+AGG + Chr5:6669047-6669066 MsG0580024590.01.T01:intron 25.0%
!!! ATAAGCAACATTCTAGAATA+TGG + Chr5:6668866-6668885 MsG0580024590.01.T01:intron 25.0%
!!! ATTTTTCTTGCTTTTCTCAT+AGG - Chr5:6667958-6667977 None:intergenic 25.0%
!!! GGAAATAAAGTTTTATGTTG+TGG - Chr5:6665533-6665552 None:intergenic 25.0%
!!! GTTTTATTACAGTGTAATGA+AGG + Chr5:6664272-6664291 MsG0580024590.01.T01:intron 25.0%
!!! TAAGCAACATTCTAGAATAT+GGG + Chr5:6668867-6668886 MsG0580024590.01.T01:intron 25.0%
!!! TATTTTTTGAGGATAGTTTC+AGG + Chr5:6666438-6666457 MsG0580024590.01.T01:intron 25.0%
!!! TTATGAATTCTAAAATGGCT+GGG + Chr5:6667930-6667949 MsG0580024590.01.T01:intron 25.0%
!!! TTTAACTGTTTTTGTTAGCA+CGG + Chr5:6665254-6665273 MsG0580024590.01.T01:intron 25.0%
!!! TTTATGAATTCTAAAATGGC+TGG + Chr5:6667929-6667948 MsG0580024590.01.T01:intron 25.0%
!!! TTTTTTCACCCATAATTTTG+AGG - Chr5:6668091-6668110 None:intergenic 25.0%
AAAAAAGAACAGTATGTACC+TGG - Chr5:6669507-6669526 None:intergenic 30.0%
AAAAAGAACATGTATGTACC+TGG - Chr5:6664139-6664158 None:intergenic 30.0%
AAATATATGGACTTGTGCAT+GGG + Chr5:6668740-6668759 MsG0580024590.01.T01:intron 30.0%
AACAAAGGGAATTGAAACTT+TGG + Chr5:6665614-6665633 MsG0580024590.01.T01:intron 30.0%
AAGTTGAGAGGAAATGAAAA+CGG + Chr5:6666380-6666399 MsG0580024590.01.T01:intron 30.0%
AATAAATTACTACCTCAAGG+AGG - Chr5:6667251-6667270 None:intergenic 30.0%
AATATTAACATAGTCGCCAA+CGG + Chr5:6667564-6667583 MsG0580024590.01.T01:intron 30.0%
AATCTTGGATTATCCAAAAG+TGG - Chr5:6664811-6664830 None:intergenic 30.0%
AATGAAGGCTAATGTTAAGA+AGG + Chr5:6664287-6664306 MsG0580024590.01.T01:CDS 30.0%
ACATTCAACTCAATCACTAA+AGG + Chr5:6664982-6665001 MsG0580024590.01.T01:intron 30.0%
AGAAAAATTATTTCCGTTGC+CGG - Chr5:6666202-6666221 None:intergenic 30.0%
AGAAAAATTATTTCCGTTGC+TGG - Chr5:6666202-6666221 None:intergenic 30.0%
AGAAAGAATGAGCTTAAAAC+AGG + Chr5:6668013-6668032 MsG0580024590.01.T01:intron 30.0%
ATAAAATTATTTCCGTTGCC+GGG - Chr5:6666009-6666028 None:intergenic 30.0%
ATAAATTACTACCTCAAGGA+GGG - Chr5:6667250-6667269 None:intergenic 30.0%
ATTGAACTGGTATAAAGGTT+CGG + Chr5:6665646-6665665 MsG0580024590.01.T01:intron 30.0%
CAAAATCAATTCAACTGATG+CGG - Chr5:6664853-6664872 None:intergenic 30.0%
CAAATGACAATCTTCTATGA+TGG + Chr5:6664327-6664346 MsG0580024590.01.T01:CDS 30.0%
CATACTAGTAGTATATACCA+TGG + Chr5:6669588-6669607 MsG0580024590.01.T01:intron 30.0%
CCATAAATAACAGGTATAGA+TGG - Chr5:6664510-6664529 None:intergenic 30.0%
CGAATGGAAAGAAAAAACAA+AGG + Chr5:6665599-6665618 MsG0580024590.01.T01:intron 30.0%
GAAAAATTATTTCCATTGCC+GGG - Chr5:6666091-6666110 None:intergenic 30.0%
GAAAAATTATTTCCGTTGCT+GGG - Chr5:6666201-6666220 None:intergenic 30.0%
GAAATGAAAAGAAAGTTGAG+AGG + Chr5:6666368-6666387 MsG0580024590.01.T01:intron 30.0%
GATGATAATCGAATTTGAGA+CGG + Chr5:6665729-6665748 MsG0580024590.01.T01:intron 30.0%
GGAAGTTGTTGAAAATTCAT+AGG - Chr5:6664078-6664097 None:intergenic 30.0%
GTACAAAAGTTGTACCAAAA+TGG - Chr5:6668478-6668497 None:intergenic 30.0%
GTACACTATATGTCACAATT+CGG - Chr5:6665816-6665835 None:intergenic 30.0%
GTATAGTTATTAAGAACGTG+TGG - Chr5:6669326-6669345 None:intergenic 30.0%
TAAGTTAAATCGCTCAAACT+AGG + Chr5:6667618-6667637 MsG0580024590.01.T01:intron 30.0%
TACTTTATAAATATCAGGGC+CGG - Chr5:6668333-6668352 None:intergenic 30.0%
TATCTATTTGACACATCATC+GGG + Chr5:6667204-6667223 MsG0580024590.01.T01:intron 30.0%
TCATCTCAAAATATCTCTTG+GGG - Chr5:6669045-6669064 None:intergenic 30.0%
TGTATCATCAATGAGAGATT+AGG - Chr5:6667868-6667887 None:intergenic 30.0%
TTATTTCCACTCTCATAACT+AGG + Chr5:6665545-6665564 MsG0580024590.01.T01:intron 30.0%
TTGAGATGAAAAGGAAAGAA+GGG + Chr5:6669056-6669075 MsG0580024590.01.T01:intron 30.0%
! AAGAAGGAAGGTAGTTTTTA+GGG - Chr5:6668790-6668809 None:intergenic 30.0%
! AGTACTAGTAATTCCTTTTG+TGG - Chr5:6664412-6664431 None:intergenic 30.0%
! ATCTCTCATTGATGATACAA+AGG + Chr5:6667869-6667888 MsG0580024590.01.T01:intron 30.0%
! ATTGGGTTTGGTTTAACTTA+AGG - Chr5:6667504-6667523 None:intergenic 30.0%
! ATTTTCACATAAAAACTCCC+GGG + Chr5:6667688-6667707 MsG0580024590.01.T01:intron 30.0%
! CCATCTATACCTGTTATTTA+TGG + Chr5:6664507-6664526 MsG0580024590.01.T01:CDS 30.0%
! CTACAAGAGATTCCTATTTT+GGG + Chr5:6664108-6664127 MsG0580024590.01.T01:CDS 30.0%
! GGACATTTTCTATAACCAAA+TGG - Chr5:6665479-6665498 None:intergenic 30.0%
! TAAGAAGGAAGGTAGTTTTT+AGG - Chr5:6668791-6668810 None:intergenic 30.0%
! TTGGGTTTGGTTTAACTTAA+GGG - Chr5:6667503-6667522 None:intergenic 30.0%
! TTTGAGATGAAAAGGAAAGA+AGG + Chr5:6669055-6669074 MsG0580024590.01.T01:intron 30.0%
!! AAAAAGGCATCAATTACTCT+TGG + Chr5:6668191-6668210 MsG0580024590.01.T01:intron 30.0%
!! AATTGATTTTGCCTACAGAA+TGG + Chr5:6664862-6664881 MsG0580024590.01.T01:intron 30.0%
!! TTTTATTTGCCTAGATCACT+TGG - Chr5:6669099-6669118 None:intergenic 30.0%
!!! CATGATGTTGTTTTTTGTTG+TGG - Chr5:6669417-6669436 None:intergenic 30.0%
!!! TTTTTTTGCAAAGGTGGTTA+TGG - Chr5:6665695-6665714 None:intergenic 30.0%
AATCATGGGATTAAGAAGGA+AGG - Chr5:6668802-6668821 None:intergenic 35.0%
ACTCAGTCCTACAAAAATAG+AGG - Chr5:6665319-6665338 None:intergenic 35.0%
ATATGGGCAACCAAGTTATT+AGG + Chr5:6668883-6668902 MsG0580024590.01.T01:intron 35.0%
ATTCAGATTTACCAATGACG+AGG + Chr5:6664628-6664647 MsG0580024590.01.T01:intron 35.0%
ATTGCTTAACATGTACCCTT+AGG + Chr5:6666837-6666856 MsG0580024590.01.T01:intron 35.0%
CAAATATATGGACTTGTGCA+TGG + Chr5:6668739-6668758 MsG0580024590.01.T01:intron 35.0%
CAAATCCGTTGTAGTATAGT+TGG + Chr5:6665943-6665962 MsG0580024590.01.T01:intron 35.0%
CAATTGATGAATCCATGACA+TGG + Chr5:6665164-6665183 MsG0580024590.01.T01:intron 35.0%
CATGTCATGGATTCATCAAT+TGG - Chr5:6665166-6665185 None:intergenic 35.0%
CCAAAATAGGAATCTCTTGT+AGG - Chr5:6664110-6664129 None:intergenic 35.0%
CTCAGTCCTACAAAAATAGA+GGG - Chr5:6665318-6665337 None:intergenic 35.0%
CTTGGATTGCTTGTTTGATA+TGG - Chr5:6665130-6665149 None:intergenic 35.0%
GAAAAAGTCCATGATGTCTT+TGG - Chr5:6669760-6669779 None:intergenic 35.0%
GAAAAATTATTTCCGTTGCC+GGG - Chr5:6666285-6666304 None:intergenic 35.0%
GAACAACAAAGTTGTCTCAA+AGG + Chr5:6668581-6668600 MsG0580024590.01.T01:intron 35.0%
GACTATTTATTGGGTCCATT+TGG + Chr5:6665461-6665480 MsG0580024590.01.T01:intron 35.0%
GCAAATCAAATCAAAGTCTC+TGG - Chr5:6667828-6667847 None:intergenic 35.0%
GCAACCACTAAAATGGATAT+GGG + Chr5:6669194-6669213 MsG0580024590.01.T01:intron 35.0%
GTATAGTTGGTCAGGATATT+CGG + Chr5:6665956-6665975 MsG0580024590.01.T01:intron 35.0%
GTTCATGGTTCGATTCAATA+AGG + Chr5:6665571-6665590 MsG0580024590.01.T01:intron 35.0%
TAAAGGGAAATGCTAAAGAG+CGG + Chr5:6666502-6666521 MsG0580024590.01.T01:intron 35.0%
TACACTCAGATTTGTGTTGT+GGG - Chr5:6665210-6665229 None:intergenic 35.0%
TCAAGTAGAATCCATTCTGT+AGG - Chr5:6664876-6664895 None:intergenic 35.0%
TGAAAAAGCCAAAGACATCA+TGG + Chr5:6664380-6664399 MsG0580024590.01.T01:CDS 35.0%
TGATAAAGCCAAAGACATCA+TGG + Chr5:6669749-6669768 MsG0580024590.01.T01:CDS 35.0%
TGCAACCACTAAAATGGATA+TGG + Chr5:6669193-6669212 MsG0580024590.01.T01:intron 35.0%
TTGCTTAACATGTACCCTTA+GGG + Chr5:6666838-6666857 MsG0580024590.01.T01:intron 35.0%
TTTAGGCCTCTTAATCTCTA+GGG + Chr5:6668307-6668326 MsG0580024590.01.T01:intron 35.0%
TTTGTAAGGACAACACAACA+TGG - Chr5:6668400-6668419 None:intergenic 35.0%
! AGTAAGCATAGTTGTTGTTG+TGG - Chr5:6664443-6664462 None:intergenic 35.0%
! ATAATACAGAGTATCACCGT+TGG - Chr5:6667583-6667602 None:intergenic 35.0%
! ATCATGGACTTTTCCACAAA+AGG + Chr5:6664396-6664415 MsG0580024590.01.T01:CDS 35.0%
! CCATTGTTAAGAGTGTAGTT+CGG + Chr5:6665399-6665418 MsG0580024590.01.T01:intron 35.0%
! CCTACAAGAGATTCCTATTT+TGG + Chr5:6664107-6664126 MsG0580024590.01.T01:CDS 35.0%
! GCTTTAGGCCTCAAAATTAT+GGG + Chr5:6668080-6668099 MsG0580024590.01.T01:intron 35.0%
! TTGTTGTTCTCTCTTCTCAT+TGG - Chr5:6668570-6668589 None:intergenic 35.0%
! TTTGTTTGAGACAGAAGTGT+TGG - Chr5:6669230-6669249 None:intergenic 35.0%
!! AGTAAGTTTGGTTCCACTTT+TGG + Chr5:6664795-6664814 MsG0580024590.01.T01:intron 35.0%
!! TTGTTTGAGACAGAAGTGTT+GGG - Chr5:6669229-6669248 None:intergenic 35.0%
!!! CTAGTTTTAAGTCGTAAACC+CGG - Chr5:6667709-6667728 None:intergenic 35.0%
!!! GAGATCTATACGTGCTATTT+TGG - Chr5:6667987-6668006 None:intergenic 35.0%
!!! GCACGTTTTTTTCCTAAGAA+GGG + Chr5:6667418-6667437 MsG0580024590.01.T01:intron 35.0%
!!! TAGTTTTAAGTCGTAAACCC+GGG - Chr5:6667708-6667727 None:intergenic 35.0%
!!! TGCACGTTTTTTTCCTAAGA+AGG + Chr5:6667417-6667436 MsG0580024590.01.T01:intron 35.0%
AAAAATCCTCGAGCATCTTG+TGG - Chr5:6666411-6666430 None:intergenic 40.0%
AAAATCCTCGAGCATCTTGT+GGG - Chr5:6666410-6666429 None:intergenic 40.0%
AACAGGATATTTATCAGGGC+CGG + Chr5:6668030-6668049 MsG0580024590.01.T01:intron 40.0%
AACCATCCTAGTTATGAGAG+TGG - Chr5:6665554-6665573 None:intergenic 40.0%
AACTGGATCAATCAGCTGTA+TGG + Chr5:6665292-6665311 MsG0580024590.01.T01:intron 40.0%
AAGGGTTATGCTAAAGACAC+TGG - Chr5:6666658-6666677 None:intergenic 40.0%
AATCCTTGTCCAAGTGATCT+AGG + Chr5:6669087-6669106 MsG0580024590.01.T01:intron 40.0%
ACAAGTTAACATGACCCGAA+AGG + Chr5:6666862-6666881 MsG0580024590.01.T01:intron 40.0%
ACACTCAGATTTGTGTTGTG+GGG - Chr5:6665209-6665228 None:intergenic 40.0%
AGATCACTTGGACAAGGATT+AGG - Chr5:6669087-6669106 None:intergenic 40.0%
AGATTGTCGAGGTCAATCAT+GGG - Chr5:6668816-6668835 None:intergenic 40.0%
AGCTGTGAAAATTCAGGTGT+TGG - Chr5:6669443-6669462 None:intergenic 40.0%
ATCTCTTGTAGGAAGAGATG+AGG - Chr5:6664099-6664118 None:intergenic 40.0%
CAGTTAAAGTAACACATGGG+TGG - Chr5:6665242-6665261 None:intergenic 40.0%
CCGAACTACACTCTTAACAA+TGG - Chr5:6665402-6665421 None:intergenic 40.0%
CCTGACCAACTATACTACAA+CGG - Chr5:6665951-6665970 None:intergenic 40.0%
CTACACTCAGATTTGTGTTG+TGG - Chr5:6665211-6665230 None:intergenic 40.0%
CTCATAACTAGGATGGTTCA+TGG + Chr5:6665556-6665575 MsG0580024590.01.T01:intron 40.0%
CTTTAGGCCTCTTAATCTCT+AGG + Chr5:6668306-6668325 MsG0580024590.01.T01:intron 40.0%
GATCACTTGGACAAGGATTA+GGG - Chr5:6669086-6669105 None:intergenic 40.0%
GCAAGTTGCAACCACTAAAA+TGG + Chr5:6669187-6669206 MsG0580024590.01.T01:intron 40.0%
GGAAAAAAACGTGCAACATG+TGG - Chr5:6667412-6667431 None:intergenic 40.0%
GGAAAAGTCCATGATGTCTT+TGG - Chr5:6664391-6664410 None:intergenic 40.0%
GGCTAATGTTAAGAAGGAAG+AGG + Chr5:6664293-6664312 MsG0580024590.01.T01:CDS 40.0%
GGTCAATCATGGGATTAAGA+AGG - Chr5:6668806-6668825 None:intergenic 40.0%
TACCTGGAGTTTCCCAAAAT+AGG - Chr5:6664123-6664142 None:intergenic 40.0%
TCGAGGTACACCTAATAACT+TGG - Chr5:6668896-6668915 None:intergenic 40.0%
TCTTGGAGAAAAGGAAGGAT+AGG + Chr5:6664670-6664689 MsG0580024590.01.T01:CDS 40.0%
TGAGGAAGCTGTGAAAATTC+AGG - Chr5:6669449-6669468 None:intergenic 40.0%
TTAAAGTAACACATGGGTGG+AGG - Chr5:6665239-6665258 None:intergenic 40.0%
TTACATGGGAGCTTAATCCA+CGG + Chr5:6667371-6667390 MsG0580024590.01.T01:CDS 40.0%
TTCCACTCTCATAACTAGGA+TGG + Chr5:6665549-6665568 MsG0580024590.01.T01:intron 40.0%
TTGATTGAGAGAGATCTTGC+TGG - Chr5:6664700-6664719 None:intergenic 40.0%
! AGGTCCCATATCCATTTTAG+TGG - Chr5:6669201-6669220 None:intergenic 40.0%
! TTTTACAGTGCAGATTGTCG+AGG - Chr5:6668827-6668846 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + Chr5:6666698-6666717 MsG0580024590.01.T01:intron 40.0%
!! ACATTTTTAGACATGGGCTC+TGG + Chr5:6667329-6667348 MsG0580024590.01.T01:intron 40.0%
!! ACTCATTAACTTGTGCCTTG+AGG - Chr5:6666716-6666735 None:intergenic 40.0%
!! ATGTCTTTGGCTTTATCAGC+TGG - Chr5:6669747-6669766 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - Chr5:6666855-6666874 None:intergenic 40.0%
!! CATTTTTAGACATGGGCTCT+GGG + Chr5:6667330-6667349 MsG0580024590.01.T01:intron 40.0%
!! CTCATTAACTTGTGCCTTGA+GGG - Chr5:6666715-6666734 None:intergenic 40.0%
!! GGCTTTAGGCCTCAAAATTA+TGG + Chr5:6668079-6668098 MsG0580024590.01.T01:intron 40.0%
!! GGTGTTGTTTCTGTATGAAC+TGG + Chr5:6665275-6665294 MsG0580024590.01.T01:intron 40.0%
!! TCATGGACTTTTTCCACCAA+AGG + Chr5:6669766-6669785 MsG0580024590.01.T01:CDS 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - Chr5:6666856-6666875 None:intergenic 40.0%
!! TTCATCGGTTCTTGGAGAAA+AGG + Chr5:6664661-6664680 MsG0580024590.01.T01:CDS 40.0%
!! TTCCTATTTTGGGAAACTCC+AGG + Chr5:6664118-6664137 MsG0580024590.01.T01:CDS 40.0%
!!! ATGTCTTTGGCTTTTTCAGC+TGG - Chr5:6664378-6664397 None:intergenic 40.0%
!!! GTATGGCCCTCTATTTTTGT+AGG + Chr5:6665309-6665328 MsG0580024590.01.T01:intron 40.0%
AGTGAAGCTTTCCTCGTCAT+TGG - Chr5:6664642-6664661 None:intergenic 45.0%
ATCCATGACATGGCTCTCTT+TGG + Chr5:6665174-6665193 MsG0580024590.01.T01:intron 45.0%
CAGATTGTCGAGGTCAATCA+TGG - Chr5:6668817-6668836 None:intergenic 45.0%
CCGTTGTAGTATAGTTGGTC+AGG + Chr5:6665948-6665967 MsG0580024590.01.T01:intron 45.0%
CGAGGAAAGCTTCACTTCAT+CGG + Chr5:6664646-6664665 MsG0580024590.01.T01:CDS 45.0%
GAGGGTCAAGTATCTATCGA+AGG - Chr5:6667232-6667251 None:intergenic 45.0%
GATTTGTGTTGTGGGGATTG+TGG - Chr5:6665202-6665221 None:intergenic 45.0%
TAGATACTTGACCCTCCTTG+AGG + Chr5:6667236-6667255 MsG0580024590.01.T01:intron 45.0%
TCGGTTCTTGGAGAAAAGGA+AGG + Chr5:6664665-6664684 MsG0580024590.01.T01:CDS 45.0%
TGCAACATGTGGCAAGTTTG+CGG - Chr5:6667401-6667420 None:intergenic 45.0%
TTGCCTAGATCACTTGGACA+AGG - Chr5:6669093-6669112 None:intergenic 45.0%
! CAACGGATTTGTACAAGCAG+AGG - Chr5:6665934-6665953 None:intergenic 45.0%
! CTAAGGCATCAACTCTTCCT+GGG + Chr5:6667759-6667778 MsG0580024590.01.T01:intron 45.0%
! GGGATGCAAAAGTGCAAACA+TGG + Chr5:6667779-6667798 MsG0580024590.01.T01:intron 45.0%
! TGTTTGCACTTTTGCATCCC+AGG - Chr5:6667779-6667798 None:intergenic 45.0%
!! AGCTTCACTTCATCGGTTCT+TGG + Chr5:6664653-6664672 MsG0580024590.01.T01:CDS 45.0%
!! TGAGACAGAAGTGTTGGGAT+AGG - Chr5:6669224-6669243 None:intergenic 45.0%
!!! TCTTTTTTTTTTTAAATAAA+GGG + Chr5:6666486-6666505 MsG0580024590.01.T01:intron 5.0%
!!! TTCTATTTATTTATTTTTAA+AGG - Chr5:6668963-6668982 None:intergenic 5.0%
!!! TTCTTTTTTTTTTTAAATAA+AGG + Chr5:6666485-6666504 MsG0580024590.01.T01:intron 5.0%
!!! TTTTTTTTATTTATTTTTTG+AGG + Chr5:6666427-6666446 MsG0580024590.01.T01:intron 5.0%
GAAAACCCACAAGATGCTCG+AGG + Chr5:6666402-6666421 MsG0580024590.01.T01:intron 50.0%
GAAAGACCTGGTTCAAGTCC+CGG + Chr5:6665988-6666007 MsG0580024590.01.T01:intron 50.0%
GCTTGTTTGATATGGTGCCC+TGG - Chr5:6665122-6665141 None:intergenic 50.0%
GGACTTGAACCAGGTCTTTC+GGG - Chr5:6665988-6666007 None:intergenic 50.0%
GGGACTTGAACCAGGTCTTT+CGG - Chr5:6665989-6666008 None:intergenic 50.0%
GGTGAAATGTGGCCCTTCTT+AGG - Chr5:6667433-6667452 None:intergenic 50.0%
TGCCAAAGAGAGCCATGTCA+TGG - Chr5:6665179-6665198 None:intergenic 50.0%
! GCTAAGGCATCAACTCTTCC+TGG + Chr5:6667758-6667777 MsG0580024590.01.T01:intron 50.0%
!! GACAGAAGTGTTGGGATAGG+AGG - Chr5:6669221-6669240 None:intergenic 50.0%
AAAGACCCGGGTTCAAGTCC+CGG + Chr5:6666180-6666199 MsG0580024590.01.T01:intron 55.0%
ACTTGAACCCGGGTCTTTCG+GGG - Chr5:6666178-6666197 None:intergenic 55.0%
ACTTGAACCGGGTCTTTGGG+GGG - Chr5:6666068-6666087 None:intergenic 55.0%
AGGACCAAGCAACCCAAGCA+AGG + Chr5:6668057-6668076 MsG0580024590.01.T01:intron 55.0%
CAAAGACCCGGTTCAAGTCC+CGG + Chr5:6666070-6666089 MsG0580024590.01.T01:intron 55.0%
CGTAGCCAGAATTGCAGCCA+GGG + Chr5:6665102-6665121 MsG0580024590.01.T01:intron 55.0%
GACTTGAACCCGGGTCTTTC+GGG - Chr5:6666179-6666198 None:intergenic 55.0%
GACTTGAACCGGGTCTTTGG+GGG - Chr5:6666069-6666088 None:intergenic 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - Chr5:6668072-6668091 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + Chr5:6668065-6668084 MsG0580024590.01.T01:intron 55.0%
GGACCAAGCAACCCAAGCAA+GGG + Chr5:6668058-6668077 MsG0580024590.01.T01:intron 55.0%
GGACTTGAACCCGGGTCTTT+CGG - Chr5:6666180-6666199 None:intergenic 55.0%
GGACTTGAACCGGGTCTTTG+GGG - Chr5:6666070-6666089 None:intergenic 55.0%
GGCAAGTTTGCGGTATACCG+TGG - Chr5:6667391-6667410 None:intergenic 55.0%
GGGACTTGAACCGGGTCTTT+GGG - Chr5:6666071-6666090 None:intergenic 55.0%
TCCATCGCCAGACGATACCT+CGG - Chr5:6667465-6667484 None:intergenic 55.0%
TCCATTGCCGGGACTTGAAC+CGG - Chr5:6666080-6666099 None:intergenic 55.0%
TCGTAGCCAGAATTGCAGCC+AGG + Chr5:6665101-6665120 MsG0580024590.01.T01:intron 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - Chr5:6668073-6668092 None:intergenic 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - Chr5:6668064-6668083 None:intergenic 55.0%
!! GGCCTCTTAATCTCTAGGGC+CGG + Chr5:6668311-6668330 MsG0580024590.01.T01:intron 55.0%
ACGATACCTCGGTGGGGAGT+CGG - Chr5:6667454-6667473 None:intergenic 60.0%
ACTAACCCCCCGAAAGACCC+GGG + Chr5:6666168-6666187 MsG0580024590.01.T01:intron 60.0%
ATCGCCAGACGATACCTCGG+TGG - Chr5:6667462-6667481 None:intergenic 60.0%
CACTAACCCCCCGAAAGACC+CGG + Chr5:6666167-6666186 MsG0580024590.01.T01:intron 60.0%
CACTAACCCCCGAAAGACCC+GGG + Chr5:6666252-6666271 MsG0580024590.01.T01:intron 60.0%
CCATTGCCGGGACTTGAACC+GGG - Chr5:6666079-6666098 None:intergenic 60.0%
CCGGGTTCAAGTCCCAGCAA+CGG + Chr5:6666186-6666205 MsG0580024590.01.T01:intron 60.0%
CCGTTGCTGGGACTTGAACC+CGG - Chr5:6666189-6666208 None:intergenic 60.0%
CCTGGTTCAAGTCCCGGCAA+CGG + Chr5:6665994-6666013 MsG0580024590.01.T01:intron 60.0%
CGGATCTCACCCGAAAGACC+TGG + Chr5:6665976-6665995 MsG0580024590.01.T01:intron 60.0%
CGGGACTTGAACCGGGTCTT+TGG - Chr5:6666072-6666091 None:intergenic 60.0%
CGTTGCTGGGACTTGAACCC+GGG - Chr5:6666188-6666207 None:intergenic 60.0%
CTTGAACCCGGGTCTTTCGG+GGG - Chr5:6666177-6666196 None:intergenic 60.0%
GCACTAACCCCCGAAAGACC+CGG + Chr5:6666251-6666270 MsG0580024590.01.T01:intron 60.0%
GGCCGGCCCTAGAGATTAAG+AGG - Chr5:6668316-6668335 None:intergenic 60.0%
GGTGGGGAGTCGGTGAAATG+TGG - Chr5:6667444-6667463 None:intergenic 60.0%
TCGCCAGACGATACCTCGGT+GGG - Chr5:6667461-6667480 None:intergenic 60.0%
TGGTGCCCTGGCTGCAATTC+TGG - Chr5:6665110-6665129 None:intergenic 60.0%
TTGAACCCGGGTCTTTCGGG+GGG - Chr5:6666176-6666195 None:intergenic 60.0%
! CTTGAACCGGGTCTTTGGGG+GGG - Chr5:6666067-6666086 None:intergenic 60.0%
!! ACCGAGGTATCGTCTGGCGA+TGG + Chr5:6667461-6667480 MsG0580024590.01.T01:intron 60.0%
!! ATTTCACCGACTCCCCACCG+AGG + Chr5:6667445-6667464 MsG0580024590.01.T01:intron 60.0%
!! GAGGTATCGTCTGGCGATGG+AGG + Chr5:6667464-6667483 MsG0580024590.01.T01:intron 60.0%
ATCCCACCCCCCCAAAGACC+CGG + Chr5:6666058-6666077 MsG0580024590.01.T01:intron 65.0%
CCCGGTTCAAGTCCCGGCAA+TGG + Chr5:6666076-6666095 MsG0580024590.01.T01:intron 65.0%
CCGGGTTCAAGTCCCGGCAA+CGG + Chr5:6666270-6666289 MsG0580024590.01.T01:intron 65.0%
CCGTTGCCGGGACTTGAACC+AGG - Chr5:6665997-6666016 None:intergenic 65.0%
CCGTTGCCGGGACTTGAACC+CGG - Chr5:6665997-6666016 None:intergenic 65.0%
CGCCAGACGATACCTCGGTG+GGG - Chr5:6667460-6667479 None:intergenic 65.0%
CGTTGCCGGGACTTGAACCC+GGG - Chr5:6666272-6666291 None:intergenic 65.0%
! AACCGGGTCTTTGGGGGGGT+GGG - Chr5:6666063-6666082 None:intergenic 65.0%
!! CTCCCCACCGAGGTATCGTC+TGG + Chr5:6667455-6667474 MsG0580024590.01.T01:intron 65.0%
! GAACCGGGTCTTTGGGGGGG+TGG - Chr5:6666064-6666083 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 6664054 6669797 6664054 ID=MsG0580024590.01;Name=MsG0580024590.01
Chr5 mRNA 6664054 6669797 6664054 ID=MsG0580024590.01.T01;Parent=MsG0580024590.01;Name=MsG0580024590.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|1|1|5|0|195
Chr5 exon 6664054 6664139 6664054 ID=MsG0580024590.01.T01:exon:2520;Parent=MsG0580024590.01.T01
Chr5 exon 6664284 6664528 6664284 ID=MsG0580024590.01.T01:exon:2521;Parent=MsG0580024590.01.T01
Chr5 exon 6664634 6664691 6664634 ID=MsG0580024590.01.T01:exon:2522;Parent=MsG0580024590.01.T01
Chr5 exon 6667339 6667392 6667339 ID=MsG0580024590.01.T01:exon:2523;Parent=MsG0580024590.01.T01
Chr5 exon 6669653 6669797 6669653 ID=MsG0580024590.01.T01:exon:2524;Parent=MsG0580024590.01.T01
Chr5 CDS 6664054 6664139 6664054 ID=MsG0580024590.01.T01:cds;Parent=MsG0580024590.01.T01
Chr5 CDS 6664284 6664528 6664284 ID=MsG0580024590.01.T01:cds;Parent=MsG0580024590.01.T01
Chr5 CDS 6664634 6664691 6664634 ID=MsG0580024590.01.T01:cds;Parent=MsG0580024590.01.T01
Chr5 CDS 6667339 6667392 6667339 ID=MsG0580024590.01.T01:cds;Parent=MsG0580024590.01.T01
Chr5 CDS 6669653 6669797 6669653 ID=MsG0580024590.01.T01:cds;Parent=MsG0580024590.01.T01
Gene Sequence

>MsG0580024590.01.T01

ATGAATCATCACAACATGACACCTATGAATTTTCAACAACTTCCTCATCTCTTCCTACAAGAGATTCCTATTTTGGGAAACTCCAGTGTAATGAAGGCTAATGTTAAGAAGGAAGAGGCTAGATGTGCACAAATGACAATCTTCTATGATGGGAAAGTAATTGTGTTTGATGATGTTCCAGCTGAAAAAGCCAAAGACATCATGGACTTTTCCACAAAAGGAATTACTAGTACTTCACAAAACCACAACAACAACTATGCTTACTCTTCATTTCTTGCTAGAAATTCTCTTCAAGACTACTATCAAGTACCATCTATACCTGTTATTTATGATTTACCAATGACGAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGGAAGGATAGACATGGGCTCTGGGACACTTCAAATATTTACTTTACATGGGAGCTTAATCCACGTGTAATGAAGGCTAATGTTAAGAAGGAAGAGGCTAGATGTGCACAAATGACAATCTTCTATGATGGGAAAGTAATTGTGTTTGATGATGTTCCAGCTGATAAAGCCAAAGACATCATGGACTTTTTCCACCAAAGGAATTACTAG
Protein sequence

>MsG0580024590.01.T01

MNHHNMTPMNFQQLPHLFLQEIPILGNSSVMKANVKKEEARCAQMTIFYDGKVIVFDDVPAEKAKDIMDFSTKGITSTSQNHNNNYAYSSFLARNSLQDYYQVPSIPVIYDLPMTRKASLHRFLEKRKDRHGLWDTSNIYFTWELNPRVMKANVKKEEARCAQMTIFYDGKVIVFDDVPADKAKDIMDFFHQRNY*