AlfalfaGEDB | MsG0880042940.01

M. sativa cultivar ZhongmuNo.1 / MsG0880042940.01

KEGG: -
GO: GO:0046983
PFAM: PF00010 PF14215

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042940.01.T01	XP_013444575.1	93.636	330	19	1	12	339	12	341	0	652

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042940.01.T01	O23090	36.036	333	136	10	20	338	29	298	3.31E-49	173

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042940.01.T01	A0A072TYH1	93.636	330	19	1	12	339	12	341	0.0	652

TFs/TRs:

Gene ID	Type	Classification
MsG0880042940.01.T01	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047797.01	MsG0880042940.01	0.812247	4.667791e-51	2.952746e-48
MsG0180004114.01	MsG0880042940.01	0.809126	2.207101e-50	1.285156e-47
MsG0780040669.01	MsG0880042940.01	0.806548	7.798125e-50	4.244588e-47
MsG0780041764.01	MsG0880042940.01	0.821190	4.606296e-53	3.721952e-50
MsG0880042918.01	MsG0880042940.01	0.982320	8.629172e-155	2.434170e-148
MsG0880042939.01	MsG0880042940.01	0.879616	1.077150e-69	5.879562e-66
MsG0880042940.01	MsG0880043548.01	0.821851	3.240717e-53	2.667555e-50
MsG0880042940.01	MsG0880045185.01	0.814795	1.284295e-51	8.700880e-49
MsG0380012101.01	MsG0880042940.01	0.826613	2.464305e-54	2.322561e-51
MsG0680034843.01	MsG0880042940.01	0.825135	5.529752e-54	4.997265e-51
MsG0580024157.01	MsG0880042940.01	0.812565	3.976640e-51	2.536933e-48
MsG0580024590.01	MsG0880042940.01	0.837797	4.203994e-57	5.522122e-54
MsG0580024690.01	MsG0880042940.01	0.800351	1.501370e-48	6.975423e-46
MsG0380017195.01	MsG0880042940.01	0.800180	1.626397e-48	7.523403e-46
MsG0580027261.01	MsG0880042940.01	0.816066	6.697390e-52	4.697819e-49
MsG0280007764.01	MsG0880042940.01	0.808911	2.454442e-50	1.420849e-47
MsG0780039655.01	MsG0880042940.01	0.801045	1.083682e-48	5.124550e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042940.01.T01	MTR_8g024790	93.636	330	19	1	12	339	12	341	0.0	652
MsG0880042940.01.T01	MTR_8g024770	79.153	307	47	5	38	339	35	329	1.43e-175	495
MsG0880042940.01.T01	MTR_7g096350	30.789	380	189	11	19	340	43	406	8.74e-38	141
MsG0880042940.01.T01	MTR_7g117670	30.193	414	182	13	25	340	49	453	6.20e-36	137
MsG0880042940.01.T01	MTR_8g067280	76.812	69	16	0	271	339	444	512	1.18e-29	119
MsG0880042940.01.T01	MTR_8g067280	31.795	195	100	6	25	190	53	243	2.32e-25	107
MsG0880042940.01.T01	MTR_5g030420	31.720	186	94	4	25	181	27	208	1.77e-29	113
MsG0880042940.01.T01	MTR_5g030420	31.720	186	94	4	25	181	27	208	3.18e-29	113
MsG0880042940.01.T01	MTR_5g030430	74.286	70	18	0	270	339	474	543	6.04e-29	117
MsG0880042940.01.T01	MTR_5g030430	32.432	185	92	3	25	180	44	224	1.30e-28	117
MsG0880042940.01.T01	MTR_8g027495	78.947	57	12	0	283	339	452	508	1.13e-22	99.4
MsG0880042940.01.T01	MTR_1g072320	27.638	199	94	7	19	181	4	188	1.45e-16	81.3
MsG0880042940.01.T01	MTR_1g072320	53.125	64	25	1	281	339	457	520	8.67e-14	72.8
MsG0880042940.01.T01	MTR_7g083900	63.462	52	19	0	287	338	284	335	1.61e-14	74.7
MsG0880042940.01.T01	MTR_7g083900	63.462	52	19	0	287	338	284	335	1.61e-14	74.7
MsG0880042940.01.T01	MTR_3g498695	59.615	52	21	0	287	338	296	347	7.07e-14	72.8
MsG0880042940.01.T01	MTR_3g498695	59.615	52	21	0	287	338	296	347	7.15e-14	72.8
MsG0880042940.01.T01	MTR_5g014600	31.288	163	93	5	183	340	52	200	1.33e-13	71.2
MsG0880042940.01.T01	MTR_4g097940	38.532	109	52	3	242	339	101	205	1.37e-13	70.9
MsG0880042940.01.T01	MTR_6g047550	43.210	81	42	1	260	340	148	224	4.77e-13	68.9
MsG0880042940.01.T01	MTR_0246s0020	53.846	52	24	0	289	340	198	249	5.50e-13	69.7
MsG0880042940.01.T01	MTR_6g047570	43.210	81	42	1	260	340	134	210	5.77e-13	69.3
MsG0880042940.01.T01	MTR_0246s0020	53.846	52	24	0	289	340	198	249	5.87e-13	69.7
MsG0880042940.01.T01	MTR_4g092700	39.744	78	42	1	263	340	137	209	9.18e-13	68.6
MsG0880042940.01.T01	MTR_4g097920	37.963	108	52	3	243	339	102	205	1.04e-12	68.6
MsG0880042940.01.T01	MTR_4g097920	37.963	108	52	3	243	339	87	190	1.13e-12	68.2
MsG0880042940.01.T01	MTR_3g030700	45.205	73	40	0	266	338	173	245	1.13e-12	68.6
MsG0880042940.01.T01	MTR_2g038040	54.902	51	23	0	290	340	53	103	1.34e-12	67.0
MsG0880042940.01.T01	MTR_4g009110	38.542	96	47	3	252	339	133	224	1.37e-12	68.2
MsG0880042940.01.T01	MTR_1g112680	35.135	111	58	2	241	339	259	367	1.39e-12	68.9
MsG0880042940.01.T01	MTR_4g066380	41.026	78	36	1	263	340	137	204	2.24e-12	67.4
MsG0880042940.01.T01	MTR_4g067010	38.636	88	39	2	258	340	121	198	2.29e-12	67.4
MsG0880042940.01.T01	MTR_4g097950	51.786	56	26	1	285	340	67	121	2.64e-12	66.2
MsG0880042940.01.T01	MTR_4g066460	41.026	78	36	1	262	339	138	205	4.71e-12	66.6
MsG0880042940.01.T01	MTR_4g009540	46.875	64	30	2	275	338	142	201	4.94e-12	66.2
MsG0880042940.01.T01	MTR_4g009540	46.875	64	30	2	275	338	142	201	5.74e-12	66.2
MsG0880042940.01.T01	MTR_0011s0260	53.846	52	24	0	289	340	183	234	5.81e-12	66.2
MsG0880042940.01.T01	MTR_0011s0210	53.846	52	24	0	289	340	183	234	6.16e-12	66.2
MsG0880042940.01.T01	MTR_0250s0040	54.902	51	23	0	289	339	88	138	7.15e-12	65.5
MsG0880042940.01.T01	MTR_2g104550	42.466	73	36	2	272	339	117	188	1.16e-11	65.1
MsG0880042940.01.T01	MTR_3g104100	46.774	62	33	0	277	338	183	244	1.64e-11	65.1
MsG0880042940.01.T01	MTR_5g014520	50.000	52	26	0	289	340	157	208	1.76e-11	64.7
MsG0880042940.01.T01	MTR_7g110810	32.432	111	65	1	240	340	153	263	2.51e-11	64.7
MsG0880042940.01.T01	MTR_2g081040	52.830	53	25	0	286	338	174	226	4.75e-11	63.5
MsG0880042940.01.T01	MTR_8g098275	51.923	52	25	0	288	339	307	358	5.13e-11	63.9
MsG0880042940.01.T01	MTR_8g098275	51.923	52	25	0	288	339	243	294	5.15e-11	63.9
MsG0880042940.01.T01	MTR_8g098275	51.923	52	25	0	288	339	400	451	5.94e-11	63.9
MsG0880042940.01.T01	MTR_2g010450	46.154	52	28	0	289	340	177	228	8.17e-11	62.8
MsG0880042940.01.T01	MTR_2g104490	41.096	73	37	2	272	339	116	187	9.85e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042940.01.T01	AT4G00870	36.036	333	136	10	20	338	29	298	3.37e-50	173
MsG0880042940.01.T01	AT5G46830	32.750	400	163	13	18	337	18	391	4.01e-43	156
MsG0880042940.01.T01	AT4G17880	26.829	410	198	10	26	339	63	466	2.09e-40	149
MsG0880042940.01.T01	AT4G16430	29.261	352	192	10	21	340	45	371	1.31e-35	135
MsG0880042940.01.T01	AT5G46760	55.856	111	45	2	229	339	359	465	2.19e-30	121
MsG0880042940.01.T01	AT5G46760	31.892	185	90	5	25	177	51	231	3.55e-27	112
MsG0880042940.01.T01	AT1G32640	31.053	190	94	3	25	181	67	252	2.93e-30	121
MsG0880042940.01.T01	AT1G32640	73.684	76	19	1	263	338	427	501	8.18e-30	120
MsG0880042940.01.T01	AT2G46510	72.222	72	20	0	269	340	375	446	1.37e-29	119
MsG0880042940.01.T01	AT1G01260	76.471	68	16	0	273	340	417	484	1.01e-27	114
MsG0880042940.01.T01	AT1G01260	28.061	196	100	5	26	184	48	239	2.22e-13	71.6
MsG0880042940.01.T01	AT1G01260	76.471	68	16	0	273	340	417	484	1.01e-27	114
MsG0880042940.01.T01	AT1G01260	28.061	196	100	5	26	184	48	239	2.22e-13	71.6
MsG0880042940.01.T01	AT1G01260	76.471	68	16	0	273	340	417	484	1.01e-27	114
MsG0880042940.01.T01	AT1G01260	28.061	196	100	5	26	184	48	239	2.22e-13	71.6
MsG0880042940.01.T01	AT4G00480	24.462	372	208	10	31	339	26	387	2.37e-16	80.5
MsG0880042940.01.T01	AT4G00480	24.462	372	208	10	31	339	26	387	2.38e-16	80.5
MsG0880042940.01.T01	AT4G00480	24.000	375	206	12	31	339	26	387	2.66e-16	80.1
MsG0880042940.01.T01	AT3G26744	61.538	52	20	0	287	338	305	356	1.20e-14	75.1
MsG0880042940.01.T01	AT3G26744	61.538	52	20	0	287	338	305	356	1.20e-14	75.1
MsG0880042940.01.T01	AT3G26744	61.538	52	20	0	287	338	305	356	1.20e-14	75.1
MsG0880042940.01.T01	AT3G26744	61.538	52	20	0	287	338	305	356	1.33e-14	75.1
MsG0880042940.01.T01	AT1G12860	61.538	52	20	0	287	338	265	316	1.74e-14	74.3
MsG0880042940.01.T01	AT1G12860	61.538	52	20	0	287	338	265	316	2.02e-14	74.3
MsG0880042940.01.T01	AT4G09820	58.824	51	21	0	288	338	362	412	5.30e-13	70.1
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	6.62e-13	67.8
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	6.77e-13	67.8
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	6.78e-13	67.8
MsG0880042940.01.T01	AT4G29930	63.636	44	16	0	291	334	56	99	1.00e-12	66.2
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	1.18e-12	67.8
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	1.18e-12	67.8
MsG0880042940.01.T01	AT4G29930	62.222	45	17	0	290	334	55	99	1.18e-12	67.4
MsG0880042940.01.T01	AT5G57150	58.696	46	19	0	290	335	55	100	2.95e-12	65.9
MsG0880042940.01.T01	AT5G57150	58.696	46	19	0	290	335	56	101	3.23e-12	65.5
MsG0880042940.01.T01	AT5G57150	58.696	46	19	0	290	335	56	101	3.54e-12	65.5
MsG0880042940.01.T01	AT5G57150	58.696	46	19	0	290	335	55	100	4.07e-12	65.9
MsG0880042940.01.T01	AT1G63650	49.020	51	26	0	289	339	405	455	6.50e-12	67.0
MsG0880042940.01.T01	AT1G63650	49.020	51	26	0	289	339	405	455	6.50e-12	67.0
MsG0880042940.01.T01	AT1G63650	49.020	51	26	0	289	339	405	455	6.50e-12	67.0
MsG0880042940.01.T01	AT5G57150	58.696	46	19	0	290	335	56	101	7.07e-12	65.5
MsG0880042940.01.T01	AT2G16910	57.447	47	20	0	293	339	318	364	9.61e-12	66.2
MsG0880042940.01.T01	AT4G37850	44.595	74	38	2	266	338	130	201	3.85e-11	63.9
MsG0880042940.01.T01	AT4G37850	44.595	74	38	2	266	338	130	201	3.85e-11	63.9
MsG0880042940.01.T01	AT5G41315	47.059	51	27	0	289	339	446	496	5.82e-11	63.9
MsG0880042940.01.T01	AT5G41315	47.059	51	27	0	289	339	449	499	6.33e-11	63.9
MsG0880042940.01.T01	AT5G41315	47.059	51	27	0	289	339	441	491	6.35e-11	63.9

Find 58 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTCATTTGTTGCAAATTT+TGG	0.152440	8:+16312288	None:intergenic
TCCAAACCCAATCCGAAAAT+TGG	0.161848	8:-16312874	MsG0880042940.01.T01:CDS
GTTTGAAATTGTTGTTTCTT+TGG	0.232211	8:+16312769	None:intergenic
AAGGTAAACCTTTCTTATCT+TGG	0.238310	8:-16312814	MsG0880042940.01.T01:CDS
ATGACAATATCCAACAAAAT+TGG	0.270722	8:-16312484	MsG0880042940.01.T01:CDS
TTATCCATCTTTGAAACATT+TGG	0.290544	8:+16312038	None:intergenic
AGGTAAACCTTTCTTATCTT+GGG	0.292720	8:-16312813	MsG0880042940.01.T01:CDS
ATCTTAAAGCATAGAATCTA+TGG	0.304209	8:+16312069	None:intergenic
TACCGATGTCGGCGAATGTT+TGG	0.330440	8:+16312360	None:intergenic
ATTCTTGTTGGTGTTGCTAA+TGG	0.335278	8:+16312209	None:intergenic
TCCATGCACGTGTGCTTCAT+TGG	0.351119	8:+16312562	None:intergenic
AGGGTTAGGGTTTGTGGTGA+AGG	0.352816	8:+16312920	None:intergenic
TGTTGAAGGGTTAGGGTTTG+TGG	0.360355	8:+16312914	None:intergenic
AACTAACGGTGTAATCGAAA+TGG	0.368563	8:-16312513	MsG0880042940.01.T01:CDS
ATCAGTGTCTTCTCCGGAAC+CGG	0.379047	8:+16312331	None:intergenic
AGAGGAAGAAAACCGTTATC+AGG	0.381422	8:-16312149	MsG0880042940.01.T01:CDS
TTGTTGTTTCTTTGGTTCCT+TGG	0.388661	8:+16312777	None:intergenic
TAGATTCTGATGTGGATGTT+TGG	0.396023	8:+16312432	None:intergenic
TAGATTTGGCTTGGTGTACT+AGG	0.400415	8:+16312459	None:intergenic
CAAACAACAAAAGATGAAAA+AGG	0.404302	8:-16312833	MsG0880042940.01.T01:CDS
ATCGGTATCGTCTCCGGTTC+CGG	0.406820	8:-16312344	MsG0880042940.01.T01:CDS
GGATGTTTGGAACATAGATT+TGG	0.408652	8:+16312445	None:intergenic
TCTGCTTCCACATGGTTTAA+CGG	0.415651	8:+16312116	None:intergenic
GGGTTAGGGTTTGTGGTGAA+GGG	0.421882	8:+16312921	None:intergenic
TTGCTTTAGATTCTGTACTT+TGG	0.425852	8:-16312628	MsG0880042940.01.T01:CDS
AGATTTGTCAAGTGGGTTTG+TGG	0.429194	8:+16312388	None:intergenic
GGTTCCAAATGTTTCAAAGA+TGG	0.435449	8:-16312042	MsG0880042940.01.T01:CDS
CCTTTCTTATCTTGGGGTGA+AGG	0.446476	8:-16312806	MsG0880042940.01.T01:CDS
CCAAACCCAATCCGAAAATT+GGG	0.468035	8:-16312873	MsG0880042940.01.T01:CDS
TGTCTCATCAGTGTCTTCTC+CGG	0.468594	8:+16312325	None:intergenic
GACAGCAACACGTGTACAAA+TGG	0.479858	8:-16312737	MsG0880042940.01.T01:CDS
GCTTCTTCAATTTCATTACC+TGG	0.483921	8:-16312659	MsG0880042940.01.T01:CDS
ACTAACGGTGTAATCGAAAT+GGG	0.485666	8:-16312512	MsG0880042940.01.T01:CDS
CCTTCACCCCAAGATAAGAA+AGG	0.497048	8:+16312806	None:intergenic
TCGATTACACCGTTAGTTGT+CGG	0.498052	8:+16312518	None:intergenic
ATTTGTATTCCGACAACTAA+CGG	0.507792	8:-16312527	MsG0880042940.01.T01:CDS
GGTGTTTGAGTTCCTGATAA+CGG	0.508977	8:+16312137	None:intergenic
GCCGACATCGGTATCGTCTC+CGG	0.512586	8:-16312350	MsG0880042940.01.T01:CDS
TTTGTCTCTCTGCTTCCACA+TGG	0.518910	8:+16312108	None:intergenic
TCCAATGAAGCACACGTGCA+TGG	0.524272	8:-16312563	MsG0880042940.01.T01:CDS
TGGAACATAGATTTGTCAAG+TGG	0.527748	8:+16312380	None:intergenic
ATTCTATGCTTTAAGATCTG+TGG	0.527981	8:-16312063	MsG0880042940.01.T01:CDS
AATTGAAGAAGCATTACCTA+TGG	0.532558	8:+16312670	None:intergenic
TTTGGAACATAGATTTGGCT+TGG	0.537383	8:+16312450	None:intergenic
GGTAAACCTTTCTTATCTTG+GGG	0.537701	8:-16312812	MsG0880042940.01.T01:CDS
TTCCAAACATTCGCCGACAT+CGG	0.537863	8:-16312362	MsG0880042940.01.T01:CDS
ATGTGGAAGCAGAGAGACAA+AGG	0.547229	8:-16312106	MsG0880042940.01.T01:CDS
ATCATAGAGGAAGATGAAGA+AGG	0.553296	8:+16312968	None:intergenic
CTTGTTGGTGTTGCTAATGG+TGG	0.567083	8:+16312212	None:intergenic
TGGGGTGAAGGCTATTTCCA+AGG	0.580662	8:-16312794	MsG0880042940.01.T01:CDS
GGAACATAGATTTGTCAAGT+GGG	0.591339	8:+16312381	None:intergenic
GTACAAATGGTGATGCTGAA+TGG	0.602234	8:-16312724	MsG0880042940.01.T01:CDS
TCTAAAGCAAAAGCTTTACC+AGG	0.602957	8:+16312641	None:intergenic
AAAAGAGAACCTAAGAAGAG+AGG	0.611347	8:-16312167	MsG0880042940.01.T01:CDS
TTCTGAGTTAGATTCTGATG+TGG	0.614919	8:+16312424	None:intergenic
ATGAGGAAATGATATCATAG+AGG	0.640466	8:+16312955	None:intergenic
ACCGGAGACGATACCGATGT+CGG	0.645053	8:+16312349	None:intergenic
TCAAACACCGTTAAACCATG+TGG	0.685029	8:-16312123	MsG0880042940.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATTGAAGTTTTTGTTGA+AGG	+	Chr8:16312051-16312070	None:intergenic	20.0%
!!!	TAATTGAAGTTTTTGTTGAA+GGG	+	Chr8:16312050-16312069	None:intergenic	20.0%
!!!	TATTCATTTGTTGCAAATTT+TGG	+	Chr8:16312663-16312682	None:intergenic	20.0%
!	ATCTTAAAGCATAGAATCTA+TGG	+	Chr8:16312882-16312901	None:intergenic	25.0%
!	ATGACAATATCCAACAAAAT+TGG	-	Chr8:16312464-16312483	MsG0880042940.01.T01:CDS	25.0%
!	CAAACAACAAAAGATGAAAA+AGG	-	Chr8:16312115-16312134	MsG0880042940.01.T01:CDS	25.0%
!!!	GAATCTTTTTCAATTCTTGT+TGG	+	Chr8:16312754-16312773	None:intergenic	25.0%
!!!	GTTTGAAATTGTTGTTTCTT+TGG	+	Chr8:16312182-16312201	None:intergenic	25.0%
!!!	TTATCCATCTTTGAAACATT+TGG	+	Chr8:16312913-16312932	None:intergenic	25.0%
	AAGGTAAACCTTTCTTATCT+TGG	-	Chr8:16312134-16312153	MsG0880042940.01.T01:CDS	30.0%
	AGGTAAACCTTTCTTATCTT+GGG	-	Chr8:16312135-16312154	MsG0880042940.01.T01:CDS	30.0%
	ATGAGGAAATGATATCATAG+AGG	+	Chr8:16311996-16312015	None:intergenic	30.0%
	ATTTGTATTCCGACAACTAA+CGG	-	Chr8:16312421-16312440	MsG0880042940.01.T01:CDS	30.0%
!	AAGTTTTTGTTGAAGGGTTA+GGG	+	Chr8:16312044-16312063	None:intergenic	30.0%
!	TTGAGTCGAAATTTTTCCAT+AGG	-	Chr8:16312262-16312281	MsG0880042940.01.T01:CDS	30.0%
!	TTGCTTTAGATTCTGTACTT+TGG	-	Chr8:16312320-16312339	MsG0880042940.01.T01:CDS	30.0%
!!	AATTGAAGAAGCATTACCTA+TGG	+	Chr8:16312281-16312300	None:intergenic	30.0%
!!	ATTCTATGCTTTAAGATCTG+TGG	-	Chr8:16312885-16312904	MsG0880042940.01.T01:CDS	30.0%
!!!	TTTTGTTGTTTGCCACAAAA+TGG	+	Chr8:16312107-16312126	None:intergenic	30.0%
	AAAAGAGAACCTAAGAAGAG+AGG	-	Chr8:16312781-16312800	MsG0880042940.01.T01:CDS	35.0%
	AACTAACGGTGTAATCGAAA+TGG	-	Chr8:16312435-16312454	MsG0880042940.01.T01:CDS	35.0%
	ACTAACGGTGTAATCGAAAT+GGG	-	Chr8:16312436-16312455	MsG0880042940.01.T01:CDS	35.0%
	ATCATAGAGGAAGATGAAGA+AGG	+	Chr8:16311983-16312002	None:intergenic	35.0%
	GCTTCTTCAATTTCATTACC+TGG	-	Chr8:16312289-16312308	MsG0880042940.01.T01:CDS	35.0%
	GGAACATAGATTTGTCAAGT+GGG	+	Chr8:16312570-16312589	None:intergenic	35.0%
	GGTAAACCTTTCTTATCTTG+GGG	-	Chr8:16312136-16312155	MsG0880042940.01.T01:CDS	35.0%
	GGTTCCAAATGTTTCAAAGA+TGG	-	Chr8:16312906-16312925	MsG0880042940.01.T01:CDS	35.0%
	TAGATTCTGATGTGGATGTT+TGG	+	Chr8:16312519-16312538	None:intergenic	35.0%
	TGGAACATAGATTTGTCAAG+TGG	+	Chr8:16312571-16312590	None:intergenic	35.0%
	TTCTGAGTTAGATTCTGATG+TGG	+	Chr8:16312527-16312546	None:intergenic	35.0%
!	AATGGCATAGACCCAATTTT+CGG	+	Chr8:16312089-16312108	None:intergenic	35.0%
!	ATAGACCCAATTTTCGGATT+GGG	+	Chr8:16312083-16312102	None:intergenic	35.0%
!	GAAGGGTTTTCATTTTCATG+AGG	+	Chr8:16312013-16312032	None:intergenic	35.0%
!	GAAGTTTTTGTTGAAGGGTT+AGG	+	Chr8:16312045-16312064	None:intergenic	35.0%
!	GGATGTTTGGAACATAGATT+TGG	+	Chr8:16312506-16312525	None:intergenic	35.0%
!	GTACTAGGTTCCAATTTTGT+TGG	+	Chr8:16312477-16312496	None:intergenic	35.0%
!	TCTAAAGCAAAAGCTTTACC+AGG	+	Chr8:16312310-16312329	None:intergenic	35.0%
!	TTCTCTTTTATCAGATGCAG+TGG	-	Chr8:16312936-16312955	MsG0880042940.01.T01:CDS	35.0%
!	TTTGGAACATAGATTTGGCT+TGG	+	Chr8:16312501-16312520	None:intergenic	35.0%
!!	ATTCTTGTTGGTGTTGCTAA+TGG	+	Chr8:16312742-16312761	None:intergenic	35.0%
!!	TTGTTGTTTCTTTGGTTCCT+TGG	+	Chr8:16312174-16312193	None:intergenic	35.0%
	AGAGGAAGAAAACCGTTATC+AGG	-	Chr8:16312799-16312818	MsG0880042940.01.T01:CDS	40.0%
	CCAAACCCAATCCGAAAATT+GGG	-	Chr8:16312075-16312094	MsG0880042940.01.T01:CDS	40.0%
	TCAAACACCGTTAAACCATG+TGG	-	Chr8:16312825-16312844	MsG0880042940.01.T01:CDS	40.0%
	TCCAAACCCAATCCGAAAAT+TGG	-	Chr8:16312074-16312093	MsG0880042940.01.T01:CDS	40.0%
	TCGATTACACCGTTAGTTGT+CGG	+	Chr8:16312433-16312452	None:intergenic	40.0%
	TCTGCTTCCACATGGTTTAA+CGG	+	Chr8:16312835-16312854	None:intergenic	40.0%
!	AGATTTGTCAAGTGGGTTTG+TGG	+	Chr8:16312563-16312582	None:intergenic	40.0%
!	CATAGACCCAATTTTCGGAT+TGG	+	Chr8:16312084-16312103	None:intergenic	40.0%
!	GGTGTTTGAGTTCCTGATAA+CGG	+	Chr8:16312814-16312833	None:intergenic	40.0%
!	GGTTTTCTTCCTCTCTTCTT+AGG	+	Chr8:16312793-16312812	None:intergenic	40.0%
!	GTACAAATGGTGATGCTGAA+TGG	-	Chr8:16312224-16312243	MsG0880042940.01.T01:CDS	40.0%
!!	TAGATTTGGCTTGGTGTACT+AGG	+	Chr8:16312492-16312511	None:intergenic	40.0%
!!!	ATTGGGTCTATGCCATTTTG+TGG	-	Chr8:16312092-16312111	MsG0880042940.01.T01:CDS	40.0%
	ATGTGGAAGCAGAGAGACAA+AGG	-	Chr8:16312842-16312861	MsG0880042940.01.T01:CDS	45.0%
	CCTTCACCCCAAGATAAGAA+AGG	+	Chr8:16312145-16312164	None:intergenic	45.0%
	CCTTTCTTATCTTGGGGTGA+AGG	-	Chr8:16312142-16312161	MsG0880042940.01.T01:CDS	45.0%
	GACAGCAACACGTGTACAAA+TGG	-	Chr8:16312211-16312230	MsG0880042940.01.T01:CDS	45.0%
	TGTCTCATCAGTGTCTTCTC+CGG	+	Chr8:16312626-16312645	None:intergenic	45.0%
	TGTTGAAGGGTTAGGGTTTG+TGG	+	Chr8:16312037-16312056	None:intergenic	45.0%
	TTCCAAACATTCGCCGACAT+CGG	-	Chr8:16312586-16312605	MsG0880042940.01.T01:CDS	45.0%
	TTTGTCTCTCTGCTTCCACA+TGG	+	Chr8:16312843-16312862	None:intergenic	45.0%
!!	CCCAATTTTCGGATTGGGTT+TGG	+	Chr8:16312078-16312097	None:intergenic	45.0%
!!	CTTGTTGGTGTTGCTAATGG+TGG	+	Chr8:16312739-16312758	None:intergenic	45.0%
	AGGGTTAGGGTTTGTGGTGA+AGG	+	Chr8:16312031-16312050	None:intergenic	50.0%
	ATCAGTGTCTTCTCCGGAAC+CGG	+	Chr8:16312620-16312639	None:intergenic	50.0%
	GGGTTAGGGTTTGTGGTGAA+GGG	+	Chr8:16312030-16312049	None:intergenic	50.0%
	TACCGATGTCGGCGAATGTT+TGG	+	Chr8:16312591-16312610	None:intergenic	50.0%
	TCCAATGAAGCACACGTGCA+TGG	-	Chr8:16312385-16312404	MsG0880042940.01.T01:CDS	50.0%
	TCCATGCACGTGTGCTTCAT+TGG	+	Chr8:16312389-16312408	None:intergenic	50.0%
!	TGGGGTGAAGGCTATTTCCA+AGG	-	Chr8:16312154-16312173	MsG0880042940.01.T01:CDS	50.0%
	ACCGGAGACGATACCGATGT+CGG	+	Chr8:16312602-16312621	None:intergenic	55.0%
	ATCGGTATCGTCTCCGGTTC+CGG	-	Chr8:16312604-16312623	MsG0880042940.01.T01:CDS	55.0%
	GCCGACATCGGTATCGTCTC+CGG	-	Chr8:16312598-16312617	MsG0880042940.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	16311974	16312996	16311974	ID=MsG0880042940.01;Name=MsG0880042940.01
Chr8	mRNA	16311974	16312996	16311974	ID=MsG0880042940.01.T01;Parent=MsG0880042940.01;Name=MsG0880042940.01.T01;_AED=0.20;_eAED=0.21;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|340
Chr8	exon	16311974	16312996	16311974	ID=MsG0880042940.01.T01:exon:4280;Parent=MsG0880042940.01.T01
Chr8	CDS	16311974	16312996	16311974	ID=MsG0880042940.01.T01:cds;Parent=MsG0880042940.01.T01

Gene Sequence

>MsG0880042940.01.T01

ATGTCACCTTCTTCATCTTCCTCTATGATATCATTTCCTCATGAAAATGAAAACCCTTCACCACAAACCCTAACCCTTCAACAAAAACTTCAATTATTAGTCCAAACCCAATCCGAAAATTGGGTCTATGCCATTTTGTGGCAAACAACAAAAGATGAAAAAGGTAAACCTTTCTTATCTTGGGGTGAAGGCTATTTCCAAGGAACCAAAGAAACAACAATTTCAAACAAACAACACGACAGCAACACGTGTACAAATGGTGATGCTGAATGGTTCTATGTGATGTCGTTGAGTCGAAATTTTTCCATAGGTAATGCTTCTTCAATTTCATTACCTGGTAAAGCTTTTGCTTTAGATTCTGTACTTTGGTTGAATAGTAAACATGAACTTCAAATCTATAACTGTGAGAGATCCAATGAAGCACACGTGCATGGAATTGAAACATTGATTTGTATTCCGACAACTAACGGTGTAATCGAAATGGGTTCTTATGACAATATCCAACAAAATTGGAACCTAGTACACCAAGCCAAATCTATGTTCCAAACATCCACATCAGAATCTAACTCAGAAATAGATCTTATCTCCACAAACCCACTTGACAAATCTATGTTCCAAACATTCGCCGACATCGGTATCGTCTCCGGTTCCGGAGAAGACACTGATGAGACACAAAAAACAATGAACCAAAATTTGCAACAAATGAATAACATTGTTTCATCATGTTCTTTTGATTCTGAAAATTCTGATTCAGAATATTGTCCACCATTAGCAACACCAACAAGAATTGAAAAAGATTCTTTTGAGAAAAGAGAACCTAAGAAGAGAGGAAGAAAACCGTTATCAGGAACTCAAACACCGTTAAACCATGTGGAAGCAGAGAGACAAAGGAGAGAGAAACTAAACCATAGATTCTATGCTTTAAGATCTGTGGTTCCAAATGTTTCAAAGATGGATAAAGCTTCTCTTTTATCAGATGCAGTGGATTACATCAACGAGTTAAAGCAAAGATTGAAGATTTAG

Protein sequence

>MsG0880042940.01.T01

MSPSSSSSMISFPHENENPSPQTLTLQQKLQLLVQTQSENWVYAILWQTTKDEKGKPFLSWGEGYFQGTKETTISNKQHDSNTCTNGDAEWFYVMSLSRNFSIGNASSISLPGKAFALDSVLWLNSKHELQIYNCERSNEAHVHGIETLICIPTTNGVIEMGSYDNIQQNWNLVHQAKSMFQTSTSESNSEIDLISTNPLDKSMFQTFADIGIVSGSGEDTDETQKTMNQNLQQMNNIVSSCSFDSENSDSEYCPPLATPTRIEKDSFEKREPKKRGRKPLSGTQTPLNHVEAERQRREKLNHRFYALRSVVPNVSKMDKASLLSDAVDYINELKQRLKI*