AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024784.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024784.01.T01 MTR_5g016510 97.196 321 4 2 11 331 1 316 0.0 622
MsG0580024784.01.T01 MTR_4g094982 53.636 330 83 10 11 330 1 270 2.62e-104 306
MsG0580024784.01.T01 MTR_6g015455 86.726 113 15 0 11 123 1 113 6.15e-64 219
MsG0580024784.01.T01 MTR_3g101290 72.973 111 30 0 7 117 29 139 2.63e-57 185
MsG0580024784.01.T01 MTR_5g082910 39.145 304 140 8 12 308 16 281 6.80e-54 178
MsG0580024784.01.T01 MTR_4g019370 68.932 103 32 0 13 115 36 138 3.67e-47 162
MsG0580024784.01.T01 MTR_4g082040 50.420 119 53 1 3 115 87 205 3.24e-38 141
MsG0580024784.01.T01 MTR_5g041570 56.436 101 44 0 15 115 134 234 5.07e-38 140
MsG0580024784.01.T01 MTR_3g110028 42.424 165 82 3 14 169 84 244 1.64e-36 140
MsG0580024784.01.T01 MTR_1g026870 54.206 107 49 0 14 120 84 190 1.89e-36 139
MsG0580024784.01.T01 MTR_6g027370 39.506 162 91 2 14 172 98 255 2.82e-36 134
MsG0580024784.01.T01 MTR_7g061330 57.843 102 43 0 14 115 112 213 5.46e-36 137
MsG0580024784.01.T01 MTR_7g461410 57.843 102 43 0 14 115 112 213 5.46e-36 137
MsG0580024784.01.T01 MTR_7g061330 52.101 119 56 1 14 132 76 193 6.01e-36 136
MsG0580024784.01.T01 MTR_7g086960 46.617 133 62 2 15 138 89 221 6.03e-35 130
MsG0580024784.01.T01 MTR_6g074860 54.000 100 46 0 15 114 4 103 6.82e-35 127
MsG0580024784.01.T01 MTR_3g089045 56.436 101 44 0 15 115 16 116 1.36e-34 128
MsG0580024784.01.T01 MTR_3g077650 50.909 110 54 0 8 117 174 283 2.54e-34 130
MsG0580024784.01.T01 MTR_7g037260 50.000 114 57 0 2 115 132 245 4.07e-34 128
MsG0580024784.01.T01 MTR_7g037130 49.565 115 56 1 2 116 132 244 1.12e-33 127
MsG0580024784.01.T01 MTR_3g461490 50.435 115 55 2 10 122 8 122 1.93e-33 126
MsG0580024784.01.T01 MTR_4g105660 52.885 104 49 0 14 117 179 282 3.81e-33 127
MsG0580024784.01.T01 MTR_5g042030 50.435 115 56 1 15 128 9 123 9.37e-33 123
MsG0580024784.01.T01 MTR_7g451170 50.000 114 57 0 2 115 178 291 1.11e-32 125
MsG0580024784.01.T01 MTR_3g052450 52.336 107 50 1 10 115 37 143 3.20e-31 123
MsG0580024784.01.T01 MTR_5g070020 48.077 104 54 0 14 117 121 224 3.35e-31 120
MsG0580024784.01.T01 MTR_5g049190 47.115 104 55 0 14 117 18 121 3.95e-31 117
MsG0580024784.01.T01 MTR_4g029540 49.606 127 60 3 15 139 12 136 5.80e-31 119
MsG0580024784.01.T01 MTR_5g029840 50.459 109 53 1 15 122 14 122 6.98e-31 119
MsG0580024784.01.T01 MTR_3g463400 49.038 104 53 0 14 117 132 235 1.20e-30 120
MsG0580024784.01.T01 MTR_3g052430 52.941 102 47 1 15 115 43 144 2.44e-30 120
MsG0580024784.01.T01 MTR_8g095390 50.427 117 57 1 15 130 14 130 2.89e-30 117
MsG0580024784.01.T01 MTR_4g478180 51.818 110 50 2 15 122 15 123 5.67e-30 117
MsG0580024784.01.T01 MTR_4g088015 49.541 109 55 0 6 114 212 320 6.35e-30 118
MsG0580024784.01.T01 MTR_5g010650 53.061 98 46 0 12 109 107 204 6.81e-30 119
MsG0580024784.01.T01 MTR_1g100653 52.941 102 47 1 15 115 14 115 8.35e-30 115
MsG0580024784.01.T01 MTR_6g012690 46.789 109 57 1 15 122 14 122 1.14e-29 116
MsG0580024784.01.T01 MTR_4g091490 46.789 109 57 1 15 122 15 123 1.35e-29 116
MsG0580024784.01.T01 MTR_5g007370 50.909 110 51 2 15 122 14 122 1.48e-29 115
MsG0580024784.01.T01 MTR_8g006470 54.902 102 44 2 15 114 12 113 1.64e-29 114
MsG0580024784.01.T01 MTR_2g011660 47.706 109 56 1 15 122 15 123 2.46e-29 115
MsG0580024784.01.T01 MTR_1g085040 50.427 117 55 2 15 129 14 129 2.70e-29 115
MsG0580024784.01.T01 MTR_7g102110 49.533 107 52 2 15 119 14 120 4.97e-29 113
MsG0580024784.01.T01 MTR_3g097450 41.026 156 77 2 15 169 14 155 5.16e-29 113
MsG0580024784.01.T01 MTR_7g035350 50.000 106 53 0 6 111 216 321 6.10e-29 116
MsG0580024784.01.T01 MTR_1g076150 45.255 137 62 4 15 142 14 146 6.69e-29 112
MsG0580024784.01.T01 MTR_3g074520 48.182 110 54 2 15 122 14 122 7.15e-29 114
MsG0580024784.01.T01 MTR_6g009430 42.975 121 68 1 15 134 14 134 8.29e-29 114
MsG0580024784.01.T01 MTR_7g076740 51.351 111 50 3 15 122 14 123 1.05e-28 112
MsG0580024784.01.T01 MTR_0008s0470 38.312 154 90 2 15 167 15 164 1.11e-28 112
MsG0580024784.01.T01 MTR_7g011170 47.706 109 56 1 15 122 14 122 1.14e-28 112
MsG0580024784.01.T01 MTR_3g103570 50.485 103 49 2 15 115 14 116 1.59e-28 113
MsG0580024784.01.T01 MTR_1g100667 48.598 107 54 1 15 120 15 121 1.90e-28 111
MsG0580024784.01.T01 MTR_1g043080 50.980 102 49 1 15 115 14 115 2.10e-28 110
MsG0580024784.01.T01 MTR_8g017500 33.333 228 120 8 2 202 3 225 2.29e-28 112
MsG0580024784.01.T01 MTR_8g031360 36.842 190 92 4 10 172 10 198 2.51e-28 111
MsG0580024784.01.T01 MTR_0008s0390 36.364 154 84 2 15 167 15 155 3.00e-28 110
MsG0580024784.01.T01 MTR_0063s0090 44.275 131 62 4 15 143 14 135 3.26e-28 109
MsG0580024784.01.T01 MTR_4g057635 48.624 109 54 2 15 121 14 122 3.44e-28 112
MsG0580024784.01.T01 MTR_5g014990 50.485 103 49 2 15 115 14 116 3.46e-28 111
MsG0580024784.01.T01 MTR_2g097910 41.791 134 77 1 15 147 22 155 3.64e-28 111
MsG0580024784.01.T01 MTR_1g073170 49.541 109 51 3 10 115 16 123 3.80e-28 110
MsG0580024784.01.T01 MTR_1g045610 48.113 106 52 2 15 118 23 127 3.80e-28 110
MsG0580024784.01.T01 MTR_1g112760 48.718 117 57 2 15 129 15 130 4.22e-28 109
MsG0580024784.01.T01 MTR_5g079670 47.706 109 56 1 15 122 13 121 5.02e-28 108
MsG0580024784.01.T01 MTR_7g117730 49.057 106 45 2 15 115 14 115 5.07e-28 110
MsG0580024784.01.T01 MTR_4g065017 46.847 111 58 1 15 124 19 129 5.71e-28 111
MsG0580024784.01.T01 MTR_8g042410 46.610 118 55 2 6 115 23 140 6.75e-28 114
MsG0580024784.01.T01 MTR_4g100720 47.170 106 55 1 15 119 15 120 7.55e-28 107
MsG0580024784.01.T01 MTR_3g077110 46.341 123 63 2 15 135 14 135 8.52e-28 111
MsG0580024784.01.T01 MTR_8g027345 51.961 102 48 1 15 115 14 115 1.28e-27 109
MsG0580024784.01.T01 MTR_3g028740 48.696 115 56 2 2 115 13 125 1.30e-27 110
MsG0580024784.01.T01 MTR_7g087130 49.057 106 53 1 15 119 14 119 1.35e-27 110
MsG0580024784.01.T01 MTR_1g017140 50.485 103 49 2 15 115 14 116 1.49e-27 110
MsG0580024784.01.T01 MTR_6g027340 36.800 125 79 0 15 139 16 140 1.53e-27 107
MsG0580024784.01.T01 MTR_2g089620 36.538 156 98 1 15 169 14 169 1.55e-27 110
MsG0580024784.01.T01 MTR_2g064160 49.091 110 53 2 15 122 13 121 1.56e-27 110
MsG0580024784.01.T01 MTR_4g073420 46.552 116 61 1 15 129 14 129 2.67e-27 108
MsG0580024784.01.T01 MTR_4g105130 47.500 120 62 1 15 133 14 133 2.78e-27 110
MsG0580024784.01.T01 MTR_8g017440 33.981 206 107 7 2 181 3 205 3.04e-27 109
MsG0580024784.01.T01 MTR_7g110830 49.138 116 58 1 15 129 14 129 3.07e-27 110
MsG0580024784.01.T01 MTR_1g017000 47.573 103 52 2 15 115 14 116 3.08e-27 107
MsG0580024784.01.T01 MTR_7g115650 47.170 106 55 1 11 115 10 115 3.16e-27 106
MsG0580024784.01.T01 MTR_2g095520 53.061 98 44 2 15 110 14 111 3.75e-27 108
MsG0580024784.01.T01 MTR_4g063100 47.059 102 53 1 15 115 9 110 4.03e-27 107
MsG0580024784.01.T01 MTR_6g055910 50.000 102 50 1 15 115 16 117 4.56e-27 108
MsG0580024784.01.T01 MTR_2g034790 45.217 115 62 1 15 128 14 128 4.68e-27 108
MsG0580024784.01.T01 MTR_1g085640 46.341 123 65 1 15 136 14 136 4.70e-27 110
MsG0580024784.01.T01 MTR_8g098860 48.246 114 56 2 3 115 4 115 5.03e-27 108
MsG0580024784.01.T01 MTR_6g027360 36.800 125 79 0 15 139 78 202 5.53e-27 108
MsG0580024784.01.T01 MTR_2g089450 48.039 102 50 2 15 114 14 114 6.00e-27 107
MsG0580024784.01.T01 MTR_4g082230 42.308 130 73 2 15 143 14 142 6.83e-27 109
MsG0580024784.01.T01 MTR_2g099740 32.093 215 106 7 2 204 3 189 8.66e-27 109
MsG0580024784.01.T01 MTR_0251s0050 44.444 117 64 1 15 130 15 131 8.67e-27 107
MsG0580024784.01.T01 MTR_8g017540 34.742 213 109 9 2 188 49 257 8.70e-27 109
MsG0580024784.01.T01 MTR_4g082290 42.308 130 73 2 15 143 14 142 8.76e-27 109
MsG0580024784.01.T01 MTR_1g110460 40.678 118 68 2 7 122 19 136 1.02e-26 107
MsG0580024784.01.T01 MTR_1g021230 50.980 102 49 1 15 115 59 160 1.11e-26 109
MsG0580024784.01.T01 MTR_4g121460 44.094 127 68 2 15 138 14 140 1.15e-26 108
MsG0580024784.01.T01 MTR_5g088610 48.182 110 53 3 11 116 7 116 1.22e-26 108
MsG0580024784.01.T01 MTR_7g010210 49.020 102 51 1 15 115 14 115 1.35e-26 106
MsG0580024784.01.T01 MTR_7g010210 49.020 102 51 1 15 115 14 115 1.48e-26 107
MsG0580024784.01.T01 MTR_0140s0030 49.057 106 45 2 15 115 15 116 1.68e-26 107
MsG0580024784.01.T01 MTR_0489s0020 49.057 106 45 2 15 115 15 116 1.68e-26 107
MsG0580024784.01.T01 MTR_5g010020 49.091 110 53 2 2 110 3 110 2.03e-26 107
MsG0580024784.01.T01 MTR_4g485530 42.982 114 64 1 10 122 9 122 2.15e-26 103
MsG0580024784.01.T01 MTR_1g043050 32.663 199 129 3 15 212 14 208 2.30e-26 105
MsG0580024784.01.T01 MTR_3g011610 49.020 102 51 1 15 115 39 140 2.65e-26 109
MsG0580024784.01.T01 MTR_5g088080 48.182 110 54 3 12 119 11 119 2.66e-26 105
MsG0580024784.01.T01 MTR_5g088150 48.182 110 54 3 12 119 11 119 2.66e-26 105
MsG0580024784.01.T01 MTR_5g488210 48.182 110 54 3 12 119 11 119 2.66e-26 105
MsG0580024784.01.T01 MTR_4g097570 50.000 98 46 2 15 109 14 111 3.26e-26 105
MsG0580024784.01.T01 MTR_5g488170 48.182 110 54 3 12 119 11 119 3.40e-26 104
MsG0580024784.01.T01 MTR_5g088640 48.182 110 54 3 12 119 11 119 3.56e-26 105
MsG0580024784.01.T01 MTR_3g083540 44.828 116 63 1 15 129 43 158 3.73e-26 105
MsG0580024784.01.T01 MTR_7g111290 50.427 117 55 2 15 129 14 129 4.33e-26 107
MsG0580024784.01.T01 MTR_1g062940 48.544 103 50 2 15 115 8 109 5.71e-26 103
MsG0580024784.01.T01 MTR_7g035075 48.077 104 53 1 12 114 13 116 6.09e-26 103
MsG0580024784.01.T01 MTR_2g088170 52.941 102 47 1 15 115 31 132 6.16e-26 107
MsG0580024784.01.T01 MTR_7g450950 43.590 117 62 2 2 115 145 260 1.09e-25 105
MsG0580024784.01.T01 MTR_3g039990 46.364 110 50 2 15 119 15 120 1.15e-25 104
MsG0580024784.01.T01 MTR_7g096930 49.020 102 51 1 15 115 14 115 1.60e-25 103
MsG0580024784.01.T01 MTR_1g057980 47.619 105 55 0 6 110 71 175 2.20e-25 103
MsG0580024784.01.T01 MTR_4g102380 43.802 121 65 2 15 133 14 133 2.37e-25 103
MsG0580024784.01.T01 MTR_6g090405 47.573 103 52 2 15 115 14 116 2.46e-25 102
MsG0580024784.01.T01 MTR_2g067420 51.546 97 46 1 15 110 16 112 2.48e-25 104
MsG0580024784.01.T01 MTR_4g097570 49.485 97 47 2 15 109 14 110 2.59e-25 103
MsG0580024784.01.T01 MTR_0008s0280 45.763 118 58 4 15 127 14 130 3.68e-25 101
MsG0580024784.01.T01 MTR_8g020490 47.059 102 53 1 15 115 10 111 4.11e-25 102
MsG0580024784.01.T01 MTR_5g062790 48.598 107 52 3 11 115 7 112 4.52e-25 103
MsG0580024784.01.T01 MTR_2g096380 44.660 103 56 1 15 116 8 110 5.58e-25 101
MsG0580024784.01.T01 MTR_6g012180 48.515 101 43 2 15 110 14 110 5.82e-25 103
MsG0580024784.01.T01 MTR_2g089420 46.602 103 52 2 15 115 13 114 7.18e-25 104
MsG0580024784.01.T01 MTR_4g128670 50.000 98 47 2 15 110 14 111 9.78e-25 103
MsG0580024784.01.T01 MTR_7g017260 41.379 116 65 1 15 127 27 142 1.08e-24 101
MsG0580024784.01.T01 MTR_8g017340 50.000 104 48 3 15 115 14 116 1.82e-24 103
MsG0580024784.01.T01 MTR_6g006030 44.340 106 58 1 15 119 16 121 2.02e-24 99.0
MsG0580024784.01.T01 MTR_5g078140 43.333 120 65 2 15 132 14 132 2.18e-24 101
MsG0580024784.01.T01 MTR_5g079120 39.683 126 75 1 15 139 63 188 2.74e-24 100
MsG0580024784.01.T01 MTR_3g065440 44.545 110 58 2 15 122 14 122 2.89e-24 100
MsG0580024784.01.T01 MTR_0247s0040 44.000 100 55 1 15 113 9 108 5.99e-24 97.1
MsG0580024784.01.T01 MTR_8g017390 44.444 117 59 4 2 115 3 116 8.03e-24 102
MsG0580024784.01.T01 MTR_0193s0090 42.574 101 57 1 15 114 9 109 8.94e-24 97.4
MsG0580024784.01.T01 MTR_5g078910 42.157 102 58 1 15 115 9 110 1.27e-23 99.0
MsG0580024784.01.T01 MTR_1g086530 43.119 109 61 1 15 122 35 143 1.33e-23 98.6
MsG0580024784.01.T01 MTR_0001s0360 41.905 105 60 1 15 118 9 113 1.83e-23 97.4
MsG0580024784.01.T01 MTR_5g078930 38.571 140 79 2 1 139 3 136 1.88e-23 96.7
MsG0580024784.01.T01 MTR_2g033170 42.105 114 65 1 10 122 21 134 2.22e-23 99.0
MsG0580024784.01.T01 MTR_8g017350 49.038 104 49 3 15 115 14 116 2.27e-23 101
MsG0580024784.01.T01 MTR_5g079290 40.000 105 62 1 15 118 19 123 2.41e-23 97.4
MsG0580024784.01.T01 MTR_5g079220 41.176 102 59 1 15 115 23 124 2.43e-23 97.8
MsG0580024784.01.T01 MTR_4g125520 42.453 106 60 1 15 119 14 119 3.32e-23 98.2
MsG0580024784.01.T01 MTR_5g078800 42.157 102 58 1 15 115 9 110 3.61e-23 97.1
MsG0580024784.01.T01 MTR_5g078860 43.137 102 57 1 15 115 9 110 4.28e-23 97.8
MsG0580024784.01.T01 MTR_3g045430 41.880 117 67 1 18 133 18 134 6.48e-23 97.1
MsG0580024784.01.T01 MTR_1g086510 42.202 109 62 1 15 122 23 131 7.79e-23 96.3
MsG0580024784.01.T01 MTR_8g060940 42.424 99 56 1 15 112 9 107 6.71e-22 93.2
MsG0580024784.01.T01 MTR_1g083630 44.118 102 56 1 15 115 14 115 1.32e-21 95.9
MsG0580024784.01.T01 MTR_5g078950 40.000 100 59 1 15 113 9 108 1.68e-21 92.4
MsG0580024784.01.T01 MTR_0197s0010 37.391 115 71 1 17 130 5 119 7.83e-21 89.7
MsG0580024784.01.T01 MTR_4g123040 40.351 114 67 1 10 122 21 134 9.43e-21 91.3
MsG0580024784.01.T01 MTR_7g109320 34.973 183 109 4 15 193 14 190 1.65e-20 91.3
MsG0580024784.01.T01 MTR_5g038910 36.449 107 68 0 9 115 20 126 3.29e-20 91.3
MsG0580024784.01.T01 MTR_8g468380 39.048 105 63 1 18 122 25 128 3.60e-20 91.3
MsG0580024784.01.T01 MTR_5g038910 37.755 98 61 0 18 115 29 126 5.79e-20 90.1
MsG0580024784.01.T01 MTR_4g063100 50.000 68 34 0 48 115 14 81 4.08e-19 85.1
MsG0580024784.01.T01 MTR_6g055910 52.941 68 32 0 48 115 21 88 4.39e-19 85.5
MsG0580024784.01.T01 MTR_4g128190 44.860 107 45 4 15 120 13 106 5.19e-18 82.4
MsG0580024784.01.T01 MTR_2g096380 46.377 69 37 0 48 116 23 91 1.17e-17 80.9
MsG0580024784.01.T01 MTR_7g111290 49.412 85 43 0 48 132 6 90 2.55e-17 82.0
MsG0580024784.01.T01 MTR_5g007300 48.000 75 38 1 15 88 66 140 3.07e-17 77.8
MsG0580024784.01.T01 MTR_1g008970 40.426 94 37 1 12 105 107 181 1.58e-16 78.6
MsG0580024784.01.T01 MTR_1g085880 46.000 100 51 3 18 115 17 115 6.14e-16 75.5
MsG0580024784.01.T01 MTR_1g085770 46.000 100 51 3 18 115 17 115 1.18e-15 76.6
MsG0580024784.01.T01 MTR_7g061550 37.234 94 56 1 18 108 10 103 1.12e-13 71.6
MsG0580024784.01.T01 MTR_0023s0210 36.709 79 41 2 15 88 9 83 1.66e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024784.01.T01 AT4G37260 49.714 350 114 10 8 330 6 320 9.77e-99 294
MsG0580024784.01.T01 AT5G67300 52.870 331 116 14 12 330 3 305 1.49e-89 270
MsG0580024784.01.T01 AT3G50060 49.351 308 107 8 12 306 3 274 2.99e-84 257
MsG0580024784.01.T01 AT2G23290 45.739 352 114 8 8 330 6 309 2.41e-83 254
MsG0580024784.01.T01 AT3G55730 68.224 107 34 0 13 119 54 160 4.84e-48 166
MsG0580024784.01.T01 AT3G09230 59.375 128 41 1 8 124 48 175 4.35e-47 164
MsG0580024784.01.T01 AT2G39880 65.049 103 36 0 13 115 48 150 5.23e-44 155
MsG0580024784.01.T01 AT3G09370 55.556 117 52 0 12 128 127 243 6.77e-39 144
MsG0580024784.01.T01 AT3G09370 55.556 117 52 0 12 128 132 248 7.07e-39 144
MsG0580024784.01.T01 AT3G09370 55.556 117 52 0 12 128 140 256 7.37e-39 144
MsG0580024784.01.T01 AT1G69560 55.446 101 45 0 15 115 107 207 3.10e-38 139
MsG0580024784.01.T01 AT1G69560 55.446 101 45 0 15 115 123 223 3.29e-38 139
MsG0580024784.01.T01 AT4G32730 44.099 161 85 2 14 170 86 245 5.25e-38 144
MsG0580024784.01.T01 AT4G32730 44.099 161 85 2 14 170 86 245 6.02e-38 144
MsG0580024784.01.T01 AT4G32730 44.099 161 85 2 14 170 86 245 6.02e-38 144
MsG0580024784.01.T01 AT4G32730 44.099 161 85 2 14 170 86 245 6.02e-38 144
MsG0580024784.01.T01 AT4G32730 44.099 161 85 2 14 170 86 245 6.02e-38 144
MsG0580024784.01.T01 AT5G17800 47.015 134 68 1 15 148 93 223 9.84e-38 137
MsG0580024784.01.T01 AT1G26780 55.446 101 45 0 15 115 98 198 9.88e-38 136
MsG0580024784.01.T01 AT1G26780 55.446 101 45 0 15 115 98 198 3.52e-37 137
MsG0580024784.01.T01 AT5G02320 50.000 120 60 0 14 133 66 185 3.52e-37 139
MsG0580024784.01.T01 AT3G29020 54.455 101 46 0 15 115 65 165 4.54e-37 133
MsG0580024784.01.T01 AT5G02320 50.000 120 60 0 14 133 126 245 5.65e-37 139
MsG0580024784.01.T01 AT5G02320 50.000 120 60 0 14 133 126 245 5.65e-37 139
MsG0580024784.01.T01 AT3G29020 54.455 101 46 0 15 115 67 167 2.60e-36 133
MsG0580024784.01.T01 AT5G11510 48.333 120 58 1 14 129 80 199 5.75e-36 138
MsG0580024784.01.T01 AT5G11510 48.333 120 58 1 14 129 80 199 5.75e-36 138
MsG0580024784.01.T01 AT5G11510 48.333 120 58 1 14 129 80 199 5.75e-36 138
MsG0580024784.01.T01 AT5G11510 48.333 120 58 1 14 129 80 199 6.63e-36 138
MsG0580024784.01.T01 AT5G11510 48.333 120 58 1 14 129 80 199 6.86e-36 138
MsG0580024784.01.T01 AT4G33450 52.475 101 48 0 15 115 19 119 2.87e-35 129
MsG0580024784.01.T01 AT1G17950 51.485 101 49 0 15 115 5 105 1.12e-34 127
MsG0580024784.01.T01 AT5G11050 50.962 104 51 0 14 117 104 207 1.74e-34 130
MsG0580024784.01.T01 AT1G73410 54.455 101 46 0 15 115 6 106 2.99e-34 125
MsG0580024784.01.T01 AT1G73410 54.455 101 46 0 15 115 6 106 4.21e-34 125
MsG0580024784.01.T01 AT5G58850 46.957 115 61 0 3 117 93 207 7.69e-34 129
MsG0580024784.01.T01 AT5G60890 47.287 129 67 1 9 136 8 136 1.63e-33 125
MsG0580024784.01.T01 AT3G27785 53.846 104 48 0 14 117 188 291 2.32e-33 128
MsG0580024784.01.T01 AT4G18770 51.818 110 48 1 14 118 216 325 2.63e-32 125
MsG0580024784.01.T01 AT5G10280 50.909 110 51 2 15 122 14 122 1.25e-31 121
MsG0580024784.01.T01 AT5G54230 49.541 109 54 1 15 122 14 122 1.05e-30 118
MsG0580024784.01.T01 AT5G16770 45.669 127 68 1 15 140 14 140 1.64e-30 118
MsG0580024784.01.T01 AT5G16770 45.669 127 68 1 15 140 14 140 1.64e-30 118
MsG0580024784.01.T01 AT5G65230 50.909 110 51 2 15 122 14 122 1.88e-30 117
MsG0580024784.01.T01 AT5G16770 45.669 127 68 1 15 140 14 140 2.85e-30 117
MsG0580024784.01.T01 AT5G16770 45.669 127 68 1 15 140 14 140 2.85e-30 117
MsG0580024784.01.T01 AT4G28110 48.624 109 55 1 15 122 14 122 4.11e-30 116
MsG0580024784.01.T01 AT4G26930 53.465 101 46 1 15 114 21 121 4.28e-30 118
MsG0580024784.01.T01 AT5G56110 47.706 109 56 1 15 122 14 122 4.98e-30 117
MsG0580024784.01.T01 AT1G34670 49.541 109 54 1 15 122 14 122 6.08e-30 117
MsG0580024784.01.T01 AT5G39700 47.475 99 52 0 16 114 57 155 6.97e-30 113
MsG0580024784.01.T01 AT3G02940 49.541 109 54 1 15 122 14 122 7.40e-30 116
MsG0580024784.01.T01 AT2G32460 52.941 102 47 1 15 115 20 121 7.43e-30 119
MsG0580024784.01.T01 AT2G32460 52.941 102 47 1 15 115 8 109 7.57e-30 119
MsG0580024784.01.T01 AT4G21440 48.624 109 55 1 15 122 14 122 8.08e-30 117
MsG0580024784.01.T01 AT5G15310 42.958 142 74 2 15 149 14 155 8.68e-30 114
MsG0580024784.01.T01 AT5G15310 42.958 142 74 2 15 149 14 155 1.09e-29 115
MsG0580024784.01.T01 AT5G15310 42.958 142 74 2 15 149 14 155 1.13e-29 116
MsG0580024784.01.T01 AT3G02940 49.541 109 54 1 15 122 14 122 1.46e-29 115
MsG0580024784.01.T01 AT3G02940 49.541 109 54 1 15 122 14 122 1.46e-29 115
MsG0580024784.01.T01 AT5G40330 49.074 108 54 1 9 115 8 115 1.49e-29 113
MsG0580024784.01.T01 AT3G11440 50.980 102 49 1 15 115 43 144 2.24e-29 117
MsG0580024784.01.T01 AT4G05100 47.706 109 56 1 15 122 15 123 3.10e-29 114
MsG0580024784.01.T01 AT3G01140 49.541 109 54 1 15 122 14 122 3.76e-29 115
MsG0580024784.01.T01 AT3G11440 50.980 102 49 1 15 115 43 144 3.97e-29 117
MsG0580024784.01.T01 AT3G11440 50.980 102 49 1 15 115 43 144 3.97e-29 117
MsG0580024784.01.T01 AT3G11440 50.980 102 49 1 15 115 43 144 3.97e-29 117
MsG0580024784.01.T01 AT1G18710 43.802 121 67 1 15 134 14 134 4.13e-29 113
MsG0580024784.01.T01 AT5G06100 50.980 102 49 1 15 115 34 135 5.45e-29 116
MsG0580024784.01.T01 AT5G26660 50.427 117 55 2 15 129 14 129 5.50e-29 114
MsG0580024784.01.T01 AT3G01140 49.541 109 54 1 15 122 57 165 5.56e-29 115
MsG0580024784.01.T01 AT5G12870 50.000 106 52 1 15 119 20 125 6.29e-29 113
MsG0580024784.01.T01 AT1G22640 35.468 203 108 4 15 194 14 216 6.58e-29 112
MsG0580024784.01.T01 AT5G14750 50.000 102 50 1 15 115 18 119 6.90e-29 110
MsG0580024784.01.T01 AT3G60460 52.941 102 46 2 15 114 13 114 7.19e-29 113
MsG0580024784.01.T01 AT1G79180 49.600 125 60 2 15 136 16 140 7.94e-29 113
MsG0580024784.01.T01 AT1G57560 50.427 117 55 2 15 129 14 129 8.05e-29 112
MsG0580024784.01.T01 AT1G09540 49.573 117 56 2 15 129 14 129 8.94e-29 114
MsG0580024784.01.T01 AT3G27920 44.853 136 64 4 15 142 16 148 9.63e-29 111
MsG0580024784.01.T01 AT1G74430 47.706 109 56 1 15 122 14 122 9.68e-29 112
MsG0580024784.01.T01 AT3G61250 47.863 117 58 2 15 129 14 129 9.80e-29 112
MsG0580024784.01.T01 AT4G38620 35.644 202 120 4 15 214 14 207 9.90e-29 112
MsG0580024784.01.T01 AT1G18570 42.308 130 70 2 8 136 8 133 1.00e-28 114
MsG0580024784.01.T01 AT5G06100 50.980 102 49 1 15 115 34 135 1.02e-28 116
MsG0580024784.01.T01 AT5G06100 50.980 102 49 1 15 115 34 135 1.02e-28 116
MsG0580024784.01.T01 AT5G06100 50.980 102 49 1 15 115 34 135 1.02e-28 116
MsG0580024784.01.T01 AT5G06100 50.980 102 49 1 15 115 34 135 1.02e-28 116
MsG0580024784.01.T01 AT1G56160 42.953 149 75 3 15 154 16 163 1.15e-28 112
MsG0580024784.01.T01 AT5G52600 50.980 102 49 1 15 115 14 115 1.24e-28 110
MsG0580024784.01.T01 AT1G57560 50.427 117 55 2 15 129 14 129 1.36e-28 112
MsG0580024784.01.T01 AT3G30210 46.281 121 60 2 15 134 29 145 1.50e-28 112
MsG0580024784.01.T01 AT5G55020 51.485 101 48 1 15 114 28 128 1.95e-28 115
MsG0580024784.01.T01 AT4G01680 51.376 109 52 1 15 122 14 122 3.25e-28 110
MsG0580024784.01.T01 AT5G40360 34.973 183 108 4 7 179 149 330 3.79e-28 112
MsG0580024784.01.T01 AT2G36890 50.000 108 52 2 15 120 14 121 4.44e-28 111
MsG0580024784.01.T01 AT1G08810 43.791 153 69 5 15 161 14 155 5.10e-28 110
MsG0580024784.01.T01 AT1G16490 50.459 109 45 2 15 118 16 120 5.71e-28 110
MsG0580024784.01.T01 AT4G17785 48.182 110 54 2 15 122 15 123 5.77e-28 112
MsG0580024784.01.T01 AT4G17785 48.182 110 54 2 15 122 15 123 6.19e-28 112
MsG0580024784.01.T01 AT5G62470 48.571 105 54 0 15 119 14 118 6.93e-28 111
MsG0580024784.01.T01 AT2G36890 50.000 108 52 2 15 120 55 162 7.83e-28 111
MsG0580024784.01.T01 AT3G23250 33.184 223 129 6 9 223 8 218 8.08e-28 110
MsG0580024784.01.T01 AT4G01680 51.376 109 52 1 15 122 14 122 8.59e-28 111
MsG0580024784.01.T01 AT4G13480 50.000 104 49 2 15 116 8 110 8.85e-28 109
MsG0580024784.01.T01 AT3G12720 50.000 110 52 2 15 122 24 132 9.33e-28 110
MsG0580024784.01.T01 AT4G09460 43.846 130 70 2 15 141 14 143 1.07e-27 108
MsG0580024784.01.T01 AT5G14340 43.590 117 63 2 15 129 26 141 1.25e-27 109
MsG0580024784.01.T01 AT3G13890 39.310 145 85 2 2 145 3 145 1.38e-27 110
MsG0580024784.01.T01 AT3G24310 48.113 106 52 2 15 118 20 124 1.46e-27 108
MsG0580024784.01.T01 AT1G35515 47.706 109 56 1 15 122 14 122 1.68e-27 107
MsG0580024784.01.T01 AT1G74080 44.000 125 65 3 15 138 14 134 1.82e-27 110
MsG0580024784.01.T01 AT3G48920 47.788 113 57 2 3 114 9 120 1.88e-27 108
MsG0580024784.01.T01 AT5G62470 48.182 110 48 2 15 119 14 119 2.02e-27 110
MsG0580024784.01.T01 AT4G34990 47.414 116 60 1 15 129 14 129 2.07e-27 108
MsG0580024784.01.T01 AT2G26960 52.475 101 47 1 15 114 22 122 2.12e-27 111
MsG0580024784.01.T01 AT4G37780 50.943 106 50 2 15 118 14 119 2.19e-27 109
MsG0580024784.01.T01 AT2G16720 48.673 113 49 2 15 122 14 122 2.79e-27 108
MsG0580024784.01.T01 AT3G12820 51.456 103 47 2 15 115 16 117 3.85e-27 107
MsG0580024784.01.T01 AT4G25560 49.020 102 51 1 15 115 12 113 4.22e-27 108
MsG0580024784.01.T01 AT3G13540 40.426 141 75 2 10 141 20 160 5.32e-27 107
MsG0580024784.01.T01 AT3G08500 50.000 102 50 1 15 115 32 133 5.85e-27 108
MsG0580024784.01.T01 AT1G63910 47.826 115 57 2 2 115 3 115 7.28e-27 109
MsG0580024784.01.T01 AT3G13890 38.312 154 83 3 2 145 3 154 8.28e-27 108
MsG0580024784.01.T01 AT5G59780 46.078 102 54 1 15 115 10 111 1.03e-26 105
MsG0580024784.01.T01 AT3G28470 49.485 97 48 1 15 110 14 110 1.13e-26 107
MsG0580024784.01.T01 AT5G57620 49.515 103 50 2 15 115 14 116 1.13e-26 108
MsG0580024784.01.T01 AT1G06180 51.456 103 47 2 15 115 14 115 1.31e-26 105
MsG0580024784.01.T01 AT5G61420 46.218 119 63 1 15 132 14 132 1.51e-26 108
MsG0580024784.01.T01 AT5G07700 42.969 128 68 2 15 141 14 137 1.55e-26 107
MsG0580024784.01.T01 AT5G07700 42.969 128 68 2 15 141 14 137 1.55e-26 107
MsG0580024784.01.T01 AT2G31180 48.077 104 53 1 15 117 14 117 1.65e-26 105
MsG0580024784.01.T01 AT3G46130 47.059 102 53 1 15 115 11 112 1.77e-26 105
MsG0580024784.01.T01 AT5G23000 50.485 103 49 2 15 115 14 116 2.29e-26 107
MsG0580024784.01.T01 AT3G47600 48.113 106 46 2 15 115 14 115 2.35e-26 107
MsG0580024784.01.T01 AT5G65790 49.515 103 50 2 15 115 14 116 2.39e-26 107
MsG0580024784.01.T01 AT1G74650 49.057 106 45 2 15 115 14 115 3.03e-26 107
MsG0580024784.01.T01 AT5G40350 48.515 101 51 1 15 114 19 119 3.28e-26 103
MsG0580024784.01.T01 AT4G01680 47.107 121 51 2 15 122 14 134 3.89e-26 107
MsG0580024784.01.T01 AT5G07690 47.706 109 52 2 15 122 14 118 4.04e-26 106
MsG0580024784.01.T01 AT3G28910 45.133 113 53 2 15 122 14 122 8.67e-26 105
MsG0580024784.01.T01 AT1G25340 39.316 117 70 1 7 122 12 128 1.21e-25 104
MsG0580024784.01.T01 AT1G25340 39.655 116 66 1 7 122 12 123 1.35e-25 103
MsG0580024784.01.T01 AT2G47190 41.322 121 70 1 3 122 10 130 2.00e-25 103
MsG0580024784.01.T01 AT3G01530 37.349 166 97 3 15 177 27 188 2.04e-25 101
MsG0580024784.01.T01 AT5G35550 43.363 113 61 2 4 115 7 117 2.26e-25 102
MsG0580024784.01.T01 AT3G49690 48.544 103 51 2 15 115 14 116 2.48e-25 103
MsG0580024784.01.T01 AT1G25340 39.655 116 66 1 7 122 12 123 2.54e-25 103
MsG0580024784.01.T01 AT4G00540 49.038 104 50 1 15 115 103 206 2.70e-25 105
MsG0580024784.01.T01 AT3G27810 47.525 101 52 1 15 114 22 122 3.41e-25 101
MsG0580024784.01.T01 AT4G00540 49.038 104 50 1 15 115 101 204 5.25e-25 105
MsG0580024784.01.T01 AT4G12350 43.697 119 64 2 15 131 14 131 8.67e-25 102
MsG0580024784.01.T01 AT4G22680 43.697 119 64 2 15 131 14 131 1.47e-24 100
MsG0580024784.01.T01 AT3G62610 47.059 102 53 1 15 115 14 115 2.43e-24 102
MsG0580024784.01.T01 AT3G53200 47.706 109 56 1 8 115 4 112 2.59e-24 99.8
MsG0580024784.01.T01 AT1G79180 39.873 158 59 3 15 136 16 173 2.76e-24 101
MsG0580024784.01.T01 AT1G66230 42.735 117 64 2 15 129 14 129 6.86e-24 99.4
MsG0580024784.01.T01 AT2G25230 40.541 111 62 3 5 114 18 125 6.98e-24 98.2
MsG0580024784.01.T01 AT5G16600 41.270 126 71 2 15 138 14 138 8.32e-24 100
MsG0580024784.01.T01 AT5G52260 47.573 103 51 2 15 115 14 115 8.72e-24 99.0
MsG0580024784.01.T01 AT1G68320 39.450 109 65 1 15 122 21 129 1.22e-23 99.0
MsG0580024784.01.T01 AT2G47460 40.164 122 68 2 15 135 14 131 2.69e-23 99.4
MsG0580024784.01.T01 AT2G26950 35.714 140 78 3 15 146 18 153 4.47e-23 99.0
MsG0580024784.01.T01 AT1G48000 39.167 120 71 2 15 133 34 152 7.39e-23 95.9
MsG0580024784.01.T01 AT5G49330 46.078 102 54 1 15 115 14 115 7.92e-23 97.8
MsG0580024784.01.T01 AT5G62320 45.299 117 54 3 15 122 15 130 8.17e-23 95.5
MsG0580024784.01.T01 AT3G06490 42.105 114 65 1 10 122 16 129 1.35e-22 96.7
MsG0580024784.01.T01 AT5G49620 41.739 115 66 1 9 122 22 136 1.71e-22 96.3
MsG0580024784.01.T01 AT2G02820 38.889 108 66 0 9 116 24 131 4.79e-22 97.1
MsG0580024784.01.T01 AT2G02820 38.889 108 66 0 9 116 24 131 5.08e-22 96.7
MsG0580024784.01.T01 AT2G02820 40.816 98 58 0 18 115 33 130 6.56e-22 95.1
MsG0580024784.01.T01 AT5G14750 55.882 68 30 0 48 115 18 85 1.67e-21 90.1
MsG0580024784.01.T01 AT1G14350 35.338 133 85 1 9 140 19 151 3.66e-21 94.0
MsG0580024784.01.T01 AT1G14350 35.338 133 85 1 9 140 19 151 3.66e-21 94.0
MsG0580024784.01.T01 AT1G66370 38.983 118 58 3 15 122 10 123 4.93e-21 90.9
MsG0580024784.01.T01 AT5G26660 52.439 82 39 0 48 129 17 98 1.73e-20 90.9
MsG0580024784.01.T01 AT3G12820 57.353 68 29 0 48 115 2 69 4.72e-20 86.7
MsG0580024784.01.T01 AT5G40350 53.731 67 31 0 48 114 8 74 3.10e-19 84.0
MsG0580024784.01.T01 AT5G59780 50.000 68 34 0 48 115 23 90 4.33e-19 84.7
MsG0580024784.01.T01 AT5G40430 38.679 106 64 1 9 114 48 152 5.69e-19 85.5
MsG0580024784.01.T01 AT5G49620 37.209 129 66 2 9 122 22 150 5.94e-19 86.3
MsG0580024784.01.T01 AT3G46130 50.000 68 34 0 48 115 23 90 9.28e-19 84.3
MsG0580024784.01.T01 AT3G46130 50.000 68 34 0 48 115 13 80 9.51e-19 84.0
MsG0580024784.01.T01 AT1G66380 41.509 106 53 2 15 115 10 111 1.38e-18 81.3
MsG0580024784.01.T01 AT5G35550 50.000 78 37 1 40 115 43 120 2.50e-18 83.6
MsG0580024784.01.T01 AT3G27810 52.239 67 32 0 48 114 7 73 3.22e-18 81.3
MsG0580024784.01.T01 AT3G53200 52.941 68 32 0 48 115 12 79 6.79e-18 81.3
MsG0580024784.01.T01 AT1G56650 37.398 123 65 3 15 129 10 128 7.13e-18 82.0
MsG0580024784.01.T01 AT1G71030 48.611 72 37 0 51 122 5 76 2.58e-17 79.0
MsG0580024784.01.T01 AT1G71030 48.611 72 37 0 51 122 19 90 2.64e-17 79.3
MsG0580024784.01.T01 AT1G66390 40.566 106 54 2 15 115 10 111 5.23e-17 79.7
MsG0580024784.01.T01 AT3G18100 42.553 94 54 0 15 108 546 639 6.55e-17 82.0
MsG0580024784.01.T01 AT3G18100 42.553 94 54 0 15 108 498 591 6.77e-17 82.0
MsG0580024784.01.T01 AT1G18960 38.793 116 67 3 15 129 10 122 7.57e-17 80.1
MsG0580024784.01.T01 AT3G18100 42.553 94 54 0 15 108 333 426 1.03e-16 81.3
MsG0580024784.01.T01 AT3G18100 42.553 94 54 0 15 108 385 478 1.06e-16 81.6
MsG0580024784.01.T01 AT3G47600 51.471 68 33 0 48 115 42 109 2.84e-16 79.0
MsG0580024784.01.T01 AT1G22640 32.911 158 84 3 59 194 2 159 3.42e-15 73.6
MsG0580024784.01.T01 AT5G14750 50.000 58 29 0 59 116 2 59 7.19e-14 68.6
MsG0580024784.01.T01 AT5G14750 50.000 58 29 0 59 116 2 59 7.19e-14 68.6
MsG0580024784.01.T01 AT2G37630 38.298 94 55 1 18 108 7 100 1.81e-13 70.9
MsG0580024784.01.T01 AT1G66380 45.455 77 42 0 39 115 2 78 4.53e-13 65.1
MsG0580024784.01.T01 AT3G23250 29.651 172 102 5 59 223 2 161 1.64e-11 63.5
MsG0580024784.01.T01 AT4G25560 55.556 45 20 0 71 115 3 47 2.55e-11 62.8

Find 89 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGTGCTTCATCTTCTTC+TGG 0.229752 5:+9670021 None:intergenic
ATCGTTCGATTTCGAAGATT+TGG 0.279727 5:+9669489 None:intergenic
AATTCTCCTGGTTCTCCTTC+TGG 0.309036 5:-9669631 MsG0580024784.01.T01:CDS
AACTCCGCACTAAAACTAAA+TGG 0.322665 5:+9669256 None:intergenic
GGCGGTGGTGGCGGAGGAGG+TGG 0.328429 5:+9669364 None:intergenic
ATCAGAGCCCATGCTCGATT+TGG 0.330164 5:-9669844 MsG0580024784.01.T01:CDS
AAATCGATACCGGGCCGGTC+AGG 0.346100 5:-9669952 MsG0580024784.01.T01:CDS
CTTATAATCGACCAGTTTCT+CGG 0.347069 5:+9669976 None:intergenic
GGGATCGCACTTGGCGGTGG+TGG 0.376891 5:+9669352 None:intergenic
GGTGGTGGCGGAGGAGGTGG+TGG 0.378626 5:+9669367 None:intergenic
AGTAATTAACAGAAAAGAAA+TGG 0.385897 5:-9670067 MsG0580024784.01.T01:CDS
TCGTTATCACTCTCACTTCC+CGG 0.387087 5:-9669457 MsG0580024784.01.T01:CDS
AGAAGCACGGGCCGAGAAAC+TGG 0.390908 5:-9669987 MsG0580024784.01.T01:CDS
AATGCTTTGGTGAAGCGAAT+TGG 0.396166 5:-9669127 MsG0580024784.01.T01:CDS
CTTGGCGGTGGTGGCGGAGG+AGG 0.401104 5:+9669361 None:intergenic
ATTATAGTATCATCCTCTTC+AGG 0.406195 5:+9669865 None:intergenic
AGAAGGAGAACCAGGAGAAT+TGG 0.407625 5:+9669633 None:intergenic
GCTGCTATTCCTGTTTCTAC+TGG 0.408564 5:-9669670 MsG0580024784.01.T01:CDS
GATTATAAGCAAATCGATAC+CGG 0.413047 5:-9669962 MsG0580024784.01.T01:CDS
TCTTAATAGCGTTATCAGTT+CGG 0.416198 5:+9669785 None:intergenic
ATCGGAACCGCCATCGGAAC+AGG 0.421410 5:+9669301 None:intergenic
GAGGAGTTACATGGCGGGAT+TGG 0.427475 5:-9669197 MsG0580024784.01.T01:CDS
GGCGGTTCCGATGCAACAAT+CGG 0.428107 5:-9669290 MsG0580024784.01.T01:CDS
ATCGCACTTGGCGGTGGTGG+CGG 0.428269 5:+9669355 None:intergenic
AGTGAGAGTGATAACGAAGT+TGG 0.431268 5:+9669463 None:intergenic
TTCACCACAAGTTGAGCATC+GGG 0.439155 5:-9669896 MsG0580024784.01.T01:CDS
ATGCTCGATTTGGAAACAAA+TGG 0.440299 5:-9669834 MsG0580024784.01.T01:CDS
GCACTTGGCGGTGGTGGCGG+AGG 0.449118 5:+9669358 None:intergenic
TTAACATGAGTGTTCACAAT+AGG 0.450108 5:+9669583 None:intergenic
TCATCTTCTTCTGGACTCCA+TGG 0.458499 5:+9670030 None:intergenic
ATATAAAGACCAGTAGAAAC+AGG 0.460718 5:+9669661 None:intergenic
GGAACAGCCGTAGTCATTAC+CGG 0.463029 5:+9669322 None:intergenic
ATAACGCTATTAAGAATCAT+TGG 0.466304 5:-9669777 MsG0580024784.01.T01:CDS
AAGTGCGATCCCTTTGATTC+CGG 0.467573 5:-9669341 MsG0580024784.01.T01:CDS
ATCAACACCAACACCAACAC+CGG 0.484745 5:+9669438 None:intergenic
TCACTCTCACTTCCCGGTGT+TGG 0.485863 5:-9669451 MsG0580024784.01.T01:CDS
TATATTAACGCCAATTCTCC+TGG 0.489647 5:-9669643 MsG0580024784.01.T01:CDS
GGATGGAATTAGGAATGCTT+TGG 0.501843 5:-9669140 MsG0580024784.01.T01:CDS
GTCGTTTCTACGAGTGGTAG+AGG 0.505072 5:+9669520 None:intergenic
TGCTCGATTTGGAAACAAAT+GGG 0.505863 5:-9669833 MsG0580024784.01.T01:CDS
TCACTTCCCGGTGTTGGTGT+TGG 0.510864 5:-9669445 MsG0580024784.01.T01:CDS
TTTGATTCCGGTAATGACTA+CGG 0.511896 5:-9669329 MsG0580024784.01.T01:CDS
ATTTGTTTCCAAATCGAGCA+TGG 0.512519 5:+9669836 None:intergenic
CATGATTTCCCTGACCGGCC+CGG 0.514477 5:+9669943 None:intergenic
CGGGATTGGAGCAACAGAAT+GGG 0.516969 5:-9669183 MsG0580024784.01.T01:CDS
ATCTGCATGATTTCCCTGAC+CGG 0.517690 5:+9669938 None:intergenic
TACGGCTGTTCCTGTTCCGA+TGG 0.523658 5:-9669311 MsG0580024784.01.T01:CDS
AAAGGGATCGCACTTGGCGG+TGG 0.526326 5:+9669349 None:intergenic
GCGGGATTGGAGCAACAGAA+TGG 0.529381 5:-9669184 MsG0580024784.01.T01:CDS
TGTTGCATCGGAACCGCCAT+CGG 0.532631 5:+9669295 None:intergenic
GCGGTTCCGATGCAACAATC+GGG 0.533201 5:-9669289 MsG0580024784.01.T01:CDS
TTTCACCACAAGTTGAGCAT+CGG 0.539872 5:-9669897 MsG0580024784.01.T01:CDS
GTAGTCATTACCGGAATCAA+AGG 0.543559 5:+9669331 None:intergenic
GCGACGGTTCTCGTTGGCAC+AGG 0.545873 5:+9669544 None:intergenic
ACTGATCCCGATTGTTGCAT+CGG 0.546146 5:+9669283 None:intergenic
GGAGTTGTTGAGTGTGATGC+AGG 0.552988 5:-9669239 MsG0580024784.01.T01:CDS
TTTGTTTCCAAATCGAGCAT+GGG 0.553033 5:+9669837 None:intergenic
GGAATCAAAGGGATCGCACT+TGG 0.553165 5:+9669343 None:intergenic
ATCAAAGGGATCGCACTTGG+CGG 0.553289 5:+9669346 None:intergenic
AATCGATACCGGGCCGGTCA+GGG 0.554290 5:-9669951 MsG0580024784.01.T01:CDS
GGCTGTTCCTGTTCCGATGG+CGG 0.555350 5:-9669308 MsG0580024784.01.T01:CDS
TCGGATCCAGAAGGAGAACC+AGG 0.556131 5:+9669625 None:intergenic
ACAAATGGGCTACAATAGCC+AGG 0.556596 5:-9669819 MsG0580024784.01.T01:CDS
GGTGGTGGTACAGTGTTGAC+AGG 0.557281 5:+9669382 None:intergenic
AAAGAAATGGATCGGATCAA+AGG 0.563795 5:-9670054 MsG0580024784.01.T01:CDS
GAGAGTGATAACGAAGTTGG+AGG 0.571500 5:+9669466 None:intergenic
AGTTCGGCCCGATAAAAGCC+TGG 0.578285 5:+9669801 None:intergenic
TTAACAGAAAAGAAATGGAT+CGG 0.584436 5:-9670062 MsG0580024784.01.T01:CDS
TAGTCATTACCGGAATCAAA+GGG 0.591280 5:+9669332 None:intergenic
TGTTGACAGGCTCAGTTACA+CGG 0.599320 5:+9669395 None:intergenic
TTGAAAAGATCTGTTAGTGC+TGG 0.605131 5:-9669694 MsG0580024784.01.T01:CDS
TCAACACCAACACCAACACC+GGG 0.608327 5:+9669439 None:intergenic
TGGATCGGATCAAAGGTCCA+TGG 0.609523 5:-9670047 MsG0580024784.01.T01:CDS
TACGAGTGGTAGAGGCGCGA+CGG 0.610707 5:+9669528 None:intergenic
CGGTTCTCGTTGGCACAGGT+CGG 0.612535 5:+9669548 None:intergenic
GACGACGTCGTTTCTACGAG+TGG 0.617236 5:+9669514 None:intergenic
AAAGCCCGATGCTCAACTTG+TGG 0.622271 5:+9669892 None:intergenic
AACAGAGGTGAGGAGTTACA+TGG 0.624499 5:-9669206 MsG0580024784.01.T01:CDS
AGAGGCGCGACGGTTCTCGT+TGG 0.636991 5:+9669538 None:intergenic
AGTGTTCACAATAGGTACGC+TGG 0.639684 5:+9669591 None:intergenic
TAAGCAAATCGATACCGGGC+CGG 0.639738 5:-9669957 MsG0580024784.01.T01:CDS
ATTATAAGCAAATCGATACC+GGG 0.640424 5:-9669961 MsG0580024784.01.T01:CDS
TCGCTCACATCGGATCCAGA+AGG 0.646473 5:+9669616 None:intergenic
GGAAATCATGCAGATTACGT+TGG 0.658062 5:-9669930 MsG0580024784.01.T01:CDS
GCAGGAGATGATTAGAACAG+AGG 0.661967 5:-9669221 MsG0580024784.01.T01:CDS
TACGCTGGACTCGCTCACAT+CGG 0.665244 5:+9669606 None:intergenic
GAGGTGAGGAGTTACATGGC+GGG 0.665524 5:-9669202 MsG0580024784.01.T01:CDS
AGATGATTAGAACAGAGGTG+AGG 0.690040 5:-9669216 MsG0580024784.01.T01:CDS
AGAGGTGAGGAGTTACATGG+CGG 0.733534 5:-9669203 MsG0580024784.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAATTAACAGAAAAGAAA+TGG - Chr5:9669116-9669135 MsG0580024784.01.T01:CDS 20.0%
! ATAACGCTATTAAGAATCAT+TGG - Chr5:9669406-9669425 MsG0580024784.01.T01:CDS 25.0%
! TTAACAGAAAAGAAATGGAT+CGG - Chr5:9669121-9669140 MsG0580024784.01.T01:CDS 25.0%
ATATAAAGACCAGTAGAAAC+AGG + Chr5:9669525-9669544 None:intergenic 30.0%
ATTATAAGCAAATCGATACC+GGG - Chr5:9669222-9669241 MsG0580024784.01.T01:CDS 30.0%
ATTATAGTATCATCCTCTTC+AGG + Chr5:9669321-9669340 None:intergenic 30.0%
GATTATAAGCAAATCGATAC+CGG - Chr5:9669221-9669240 MsG0580024784.01.T01:CDS 30.0%
TCTTAATAGCGTTATCAGTT+CGG + Chr5:9669401-9669420 None:intergenic 30.0%
TTAACATGAGTGTTCACAAT+AGG + Chr5:9669603-9669622 None:intergenic 30.0%
AAAAAGCTGAGGATGGAATT+AGG - Chr5:9670033-9670052 MsG0580024784.01.T01:CDS 35.0%
AAAGAAATGGATCGGATCAA+AGG - Chr5:9669129-9669148 MsG0580024784.01.T01:CDS 35.0%
AACTCCGCACTAAAACTAAA+TGG + Chr5:9669930-9669949 None:intergenic 35.0%
ATCGTTCGATTTCGAAGATT+TGG + Chr5:9669697-9669716 None:intergenic 35.0%
ATTTGTTTCCAAATCGAGCA+TGG + Chr5:9669350-9669369 None:intergenic 35.0%
CTTATAATCGACCAGTTTCT+CGG + Chr5:9669210-9669229 None:intergenic 35.0%
TAGTCATTACCGGAATCAAA+GGG + Chr5:9669854-9669873 None:intergenic 35.0%
TATATTAACGCCAATTCTCC+TGG - Chr5:9669540-9669559 MsG0580024784.01.T01:CDS 35.0%
TTGAAAAGATCTGTTAGTGC+TGG - Chr5:9669489-9669508 MsG0580024784.01.T01:CDS 35.0%
TTTGATTCCGGTAATGACTA+CGG - Chr5:9669854-9669873 MsG0580024784.01.T01:CDS 35.0%
TTTGTTTCCAAATCGAGCAT+GGG + Chr5:9669349-9669368 None:intergenic 35.0%
! GATGTGTTTTCAAAAAGCTG+AGG - Chr5:9670022-9670041 MsG0580024784.01.T01:CDS 35.0%
! GCACTAACAGATCTTTTCAA+CGG + Chr5:9669489-9669508 None:intergenic 35.0%
! TACAATAGCCAGGCTTTTAT+CGG - Chr5:9669374-9669393 MsG0580024784.01.T01:CDS 35.0%
! TGTTTTCAAAAAGCTGAGGA+TGG - Chr5:9670026-9670045 MsG0580024784.01.T01:CDS 35.0%
!! ATGCTCGATTTGGAAACAAA+TGG - Chr5:9669349-9669368 MsG0580024784.01.T01:CDS 35.0%
!! TGCTCGATTTGGAAACAAAT+GGG - Chr5:9669350-9669369 MsG0580024784.01.T01:CDS 35.0%
!!! GATGCCATTTAGTTTTAGTG+CGG - Chr5:9669923-9669942 MsG0580024784.01.T01:CDS 35.0%
AATGCTTTGGTGAAGCGAAT+TGG - Chr5:9670056-9670075 MsG0580024784.01.T01:CDS 40.0%
AGATGATTAGAACAGAGGTG+AGG - Chr5:9669967-9669986 MsG0580024784.01.T01:CDS 40.0%
GGAAATCATGCAGATTACGT+TGG - Chr5:9669253-9669272 MsG0580024784.01.T01:CDS 40.0%
GGATGGAATTAGGAATGCTT+TGG - Chr5:9670043-9670062 MsG0580024784.01.T01:CDS 40.0%
GTAGTCATTACCGGAATCAA+AGG + Chr5:9669855-9669874 None:intergenic 40.0%
! ACAATAGCCAGGCTTTTATC+GGG - Chr5:9669375-9669394 MsG0580024784.01.T01:CDS 40.0%
! AGTGAGAGTGATAACGAAGT+TGG + Chr5:9669723-9669742 None:intergenic 40.0%
! CTAACAGATCTTTTCAACGG+TGG + Chr5:9669486-9669505 None:intergenic 40.0%
! TGAAGCACTTCAAAAACTCG+TGG - Chr5:9669173-9669192 MsG0580024784.01.T01:CDS 40.0%
! TGAAGTGCTTCATCTTCTTC+TGG + Chr5:9669165-9669184 None:intergenic 40.0%
! TTTCACCACAAGTTGAGCAT+CGG - Chr5:9669286-9669305 MsG0580024784.01.T01:CDS 40.0%
AACAGAGGTGAGGAGTTACA+TGG - Chr5:9669977-9669996 MsG0580024784.01.T01:CDS 45.0%
AAGTGCGATCCCTTTGATTC+CGG - Chr5:9669842-9669861 MsG0580024784.01.T01:CDS 45.0%
ACTGATCCCGATTGTTGCAT+CGG + Chr5:9669903-9669922 None:intergenic 45.0%
AGAAGGAGAACCAGGAGAAT+TGG + Chr5:9669553-9669572 None:intergenic 45.0%
AGTGTTCACAATAGGTACGC+TGG + Chr5:9669595-9669614 None:intergenic 45.0%
ATCAACACCAACACCAACAC+CGG + Chr5:9669748-9669767 None:intergenic 45.0%
ATCTGCATGATTTCCCTGAC+CGG + Chr5:9669248-9669267 None:intergenic 45.0%
CAAAAACTCGTGGAGAAGCA+CGG - Chr5:9669183-9669202 MsG0580024784.01.T01:CDS 45.0%
GCAGGAGATGATTAGAACAG+AGG - Chr5:9669962-9669981 MsG0580024784.01.T01:CDS 45.0%
TCATCTTCTTCTGGACTCCA+TGG + Chr5:9669156-9669175 None:intergenic 45.0%
TCGTTATCACTCTCACTTCC+CGG - Chr5:9669726-9669745 MsG0580024784.01.T01:CDS 45.0%
TGTTGACAGGCTCAGTTACA+CGG + Chr5:9669791-9669810 None:intergenic 45.0%
! AAAAACTCGTGGAGAAGCAC+GGG - Chr5:9669184-9669203 MsG0580024784.01.T01:CDS 45.0%
! AATTCTCCTGGTTCTCCTTC+TGG - Chr5:9669552-9669571 MsG0580024784.01.T01:CDS 45.0%
! GAGAGTGATAACGAAGTTGG+AGG + Chr5:9669720-9669739 None:intergenic 45.0%
! TTCACCACAAGTTGAGCATC+GGG - Chr5:9669287-9669306 MsG0580024784.01.T01:CDS 45.0%
!! ACAAATGGGCTACAATAGCC+AGG - Chr5:9669364-9669383 MsG0580024784.01.T01:CDS 45.0%
!! GCTGCTATTCCTGTTTCTAC+TGG - Chr5:9669513-9669532 MsG0580024784.01.T01:CDS 45.0%
AAAGCCCGATGCTCAACTTG+TGG + Chr5:9669294-9669313 None:intergenic 50.0%
AGAGGTGAGGAGTTACATGG+CGG - Chr5:9669980-9669999 MsG0580024784.01.T01:CDS 50.0%
ATCAAAGGGATCGCACTTGG+CGG + Chr5:9669840-9669859 None:intergenic 50.0%
ATCAGAGCCCATGCTCGATT+TGG - Chr5:9669339-9669358 MsG0580024784.01.T01:CDS 50.0%
CGGGATTGGAGCAACAGAAT+GGG - Chr5:9670000-9670019 MsG0580024784.01.T01:CDS 50.0%
GGAACAGCCGTAGTCATTAC+CGG + Chr5:9669864-9669883 None:intergenic 50.0%
GGAATCAAAGGGATCGCACT+TGG + Chr5:9669843-9669862 None:intergenic 50.0%
GGAGTTGTTGAGTGTGATGC+AGG - Chr5:9669944-9669963 MsG0580024784.01.T01:CDS 50.0%
GTCGTTTCTACGAGTGGTAG+AGG + Chr5:9669666-9669685 None:intergenic 50.0%
TAAGCAAATCGATACCGGGC+CGG - Chr5:9669226-9669245 MsG0580024784.01.T01:CDS 50.0%
TCAACACCAACACCAACACC+GGG + Chr5:9669747-9669766 None:intergenic 50.0%
TGGATCGGATCAAAGGTCCA+TGG - Chr5:9669136-9669155 MsG0580024784.01.T01:CDS 50.0%
AGTTCGGCCCGATAAAAGCC+TGG + Chr5:9669385-9669404 None:intergenic 55.0%
GACGACGTCGTTTCTACGAG+TGG + Chr5:9669672-9669691 None:intergenic 55.0%
GAGGTGAGGAGTTACATGGC+GGG - Chr5:9669981-9670000 MsG0580024784.01.T01:CDS 55.0%
GCGGGATTGGAGCAACAGAA+TGG - Chr5:9669999-9670018 MsG0580024784.01.T01:CDS 55.0%
GCGGTTCCGATGCAACAATC+GGG - Chr5:9669894-9669913 MsG0580024784.01.T01:CDS 55.0%
GGCGGTTCCGATGCAACAAT+CGG - Chr5:9669893-9669912 MsG0580024784.01.T01:CDS 55.0%
TACGCTGGACTCGCTCACAT+CGG + Chr5:9669580-9669599 None:intergenic 55.0%
TACGGCTGTTCCTGTTCCGA+TGG - Chr5:9669872-9669891 MsG0580024784.01.T01:CDS 55.0%
TCACTCTCACTTCCCGGTGT+TGG - Chr5:9669732-9669751 MsG0580024784.01.T01:CDS 55.0%
TCGCTCACATCGGATCCAGA+AGG + Chr5:9669570-9669589 None:intergenic 55.0%
TCGGATCCAGAAGGAGAACC+AGG + Chr5:9669561-9669580 None:intergenic 55.0%
TGTTGCATCGGAACCGCCAT+CGG + Chr5:9669891-9669910 None:intergenic 55.0%
! GAGGAGTTACATGGCGGGAT+TGG - Chr5:9669986-9670005 MsG0580024784.01.T01:CDS 55.0%
! TCGGGCTTTTACGCCTGAAG+AGG - Chr5:9669305-9669324 MsG0580024784.01.T01:CDS 55.0%
!! GGTGGTGGTACAGTGTTGAC+AGG + Chr5:9669804-9669823 None:intergenic 55.0%
!! TCACTTCCCGGTGTTGGTGT+TGG - Chr5:9669738-9669757 MsG0580024784.01.T01:CDS 55.0%
AAAGGGATCGCACTTGGCGG+TGG + Chr5:9669837-9669856 None:intergenic 60.0%
AAATCGATACCGGGCCGGTC+AGG - Chr5:9669231-9669250 MsG0580024784.01.T01:CDS 60.0%
AATCGATACCGGGCCGGTCA+GGG - Chr5:9669232-9669251 MsG0580024784.01.T01:CDS 60.0%
ATCGGAACCGCCATCGGAAC+AGG + Chr5:9669885-9669904 None:intergenic 60.0%
CATGATTTCCCTGACCGGCC+CGG + Chr5:9669243-9669262 None:intergenic 60.0%
CGGTTCTCGTTGGCACAGGT+CGG + Chr5:9669638-9669657 None:intergenic 60.0%
GGCTGTTCCTGTTCCGATGG+CGG - Chr5:9669875-9669894 MsG0580024784.01.T01:CDS 60.0%
! AGAAGCACGGGCCGAGAAAC+TGG - Chr5:9669196-9669215 MsG0580024784.01.T01:CDS 60.0%
! TACGAGTGGTAGAGGCGCGA+CGG + Chr5:9669658-9669677 None:intergenic 60.0%
GCGACGGTTCTCGTTGGCAC+AGG + Chr5:9669642-9669661 None:intergenic 65.0%
! AGAGGCGCGACGGTTCTCGT+TGG + Chr5:9669648-9669667 None:intergenic 65.0%
! ATCGCACTTGGCGGTGGTGG+CGG + Chr5:9669831-9669850 None:intergenic 65.0%
GGGATCGCACTTGGCGGTGG+TGG + Chr5:9669834-9669853 None:intergenic 70.0%
!! CTTGGCGGTGGTGGCGGAGG+AGG + Chr5:9669825-9669844 None:intergenic 75.0%
!! GCACTTGGCGGTGGTGGCGG+AGG + Chr5:9669828-9669847 None:intergenic 75.0%
!! GGTGGTGGCGGAGGAGGTGG+TGG + Chr5:9669819-9669838 None:intergenic 75.0%
!!! GGCGGTGGTGGCGGAGGAGG+TGG + Chr5:9669822-9669841 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9669105 9670100 9669105 ID=MsG0580024784.01;Name=MsG0580024784.01
Chr5 mRNA 9669105 9670100 9669105 ID=MsG0580024784.01.T01;Parent=MsG0580024784.01;Name=MsG0580024784.01.T01;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|331
Chr5 exon 9669105 9670100 9669105 ID=MsG0580024784.01.T01:exon:19561;Parent=MsG0580024784.01.T01
Chr5 CDS 9669105 9670100 9669105 ID=MsG0580024784.01.T01:cds;Parent=MsG0580024784.01.T01
Gene Sequence

>MsG0580024784.01.T01

ATGAACAACACAGTAATTAACAGAAAAGAAATGGATCGGATCAAAGGTCCATGGAGTCCAGAAGAAGATGAAGCACTTCAAAAACTCGTGGAGAAGCACGGGCCGAGAAACTGGTCGATTATAAGCAAATCGATACCGGGCCGGTCAGGGAAATCATGCAGATTACGTTGGTGTAATCAGCTTTCACCACAAGTTGAGCATCGGGCTTTTACGCCTGAAGAGGATGATACTATAATCAGAGCCCATGCTCGATTTGGAAACAAATGGGCTACAATAGCCAGGCTTTTATCGGGCCGAACTGATAACGCTATTAAGAATCATTGGAACTCTACTTTGAAACGTAAGTGTTCTTCTATTATGATTGATGATTCTGAATCTCCACCGTTGAAAAGATCTGTTAGTGCTGGTGCTGCTATTCCTGTTTCTACTGGTCTTTATATTAACGCCAATTCTCCTGGTTCTCCTTCTGGATCCGATGTGAGCGAGTCCAGCGTACCTATTGTGAACACTCATGTTAACTCTCATGTTTACCGACCTGTGCCAACGAGAACCGTCGCGCCTCTACCACTCGTAGAAACGACGTCGTCTTCCAAATCTTCGAAATCGAACGATCCTCCAACTTCGTTATCACTCTCACTTCCCGGTGTTGGTGTTGGTGTTGATTCTTCTTCTGAAGATTCAAACCGTGTAACTGAGCCTGTCAACACTGTACCACCACCTCCTCCGCCACCACCGCCAAGTGCGATCCCTTTGATTCCGGTAATGACTACGGCTGTTCCTGTTCCGATGGCGGTTCCGATGCAACAATCGGGATCAGTGATGCCATTTAGTTTTAGTGCGGAGTTGTTGAGTGTGATGCAGGAGATGATTAGAACAGAGGTGAGGAGTTACATGGCGGGATTGGAGCAACAGAATGGGATGTGTTTTCAAAAAGCTGAGGATGGAATTAGGAATGCTTTGGTGAAGCGAATTGGAATTAGCAGAATCGATTCGTAA
Protein sequence

>MsG0580024784.01.T01

MNNTVINRKEMDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDSESPPLKRSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPTRTVAPLPLVETTSSSKSSKSNDPPTSLSLSLPGVGVGVDSSSEDSNRVTEPVNTVPPPPPPPPPSAIPLIPVMTTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAEDGIRNALVKRIGISRIDS*