Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022657.01.T01 | XP_003608450.1 | 98 | 300 | 6 | 0 | 1 | 300 | 1 | 300 | 0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022657.01.T01 | Q9FE06 | 70.55 | 309 | 78 | 5 | 1 | 300 | 1 | 305 | 7.85E-152 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022657.01.T01 | G7JCS2 | 98.000 | 300 | 6 | 0 | 1 | 300 | 1 | 300 | 0.0 | 599 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005939.01 | MsG0480022657.01 | 0.826128 | 3.214873e-54 | 2.988480e-51 |
| MsG0480021354.01 | MsG0480022657.01 | 0.812715 | 3.687646e-51 | 2.361826e-48 |
| MsG0480022657.01 | MsG0480023987.01 | 0.805012 | 1.639136e-49 | 8.577440e-47 |
| MsG0480022657.01 | MsG0580024784.01 | 0.801124 | 1.043921e-48 | 4.946246e-46 |
| MsG0480022657.01 | MsG0880045477.01 | 0.804290 | 2.319284e-49 | 1.191285e-46 |
| MsG0380016156.01 | MsG0480022657.01 | 0.805342 | 1.398104e-49 | 7.378406e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022657.01.T01 | MTR_4g094240 | 98.000 | 300 | 6 | 0 | 1 | 300 | 1 | 300 | 0.0 | 599 |
| MsG0480022657.01.T01 | MTR_2g009070 | 67.442 | 301 | 92 | 5 | 5 | 300 | 5 | 304 | 1.71e-151 | 426 |
| MsG0480022657.01.T01 | MTR_5g464340 | 59.048 | 315 | 114 | 5 | 1 | 300 | 1 | 315 | 2.16e-124 | 358 |
| MsG0480022657.01.T01 | MTR_5g064340 | 59.048 | 315 | 114 | 5 | 1 | 300 | 1 | 315 | 2.16e-124 | 358 |
| MsG0480022657.01.T01 | MTR_3g074830 | 58.280 | 314 | 116 | 4 | 1 | 300 | 33 | 345 | 3.32e-123 | 356 |
| MsG0480022657.01.T01 | MTR_5g064345 | 58.544 | 316 | 114 | 6 | 1 | 300 | 1 | 315 | 4.70e-123 | 355 |
| MsG0480022657.01.T01 | MTR_5g064360 | 57.643 | 314 | 116 | 6 | 1 | 300 | 6 | 316 | 3.47e-122 | 352 |
| MsG0480022657.01.T01 | MTR_3g074860 | 59.783 | 276 | 102 | 3 | 30 | 300 | 33 | 304 | 3.67e-119 | 344 |
| MsG0480022657.01.T01 | MTR_3g074890 | 59.420 | 276 | 103 | 4 | 30 | 300 | 33 | 304 | 5.00e-118 | 342 |
| MsG0480022657.01.T01 | MTR_4g033790 | 37.050 | 278 | 157 | 7 | 35 | 296 | 65 | 340 | 8.42e-46 | 158 |
| MsG0480022657.01.T01 | MTR_1g076470 | 37.500 | 280 | 154 | 7 | 35 | 296 | 64 | 340 | 4.82e-44 | 154 |
| MsG0480022657.01.T01 | MTR_8g071310 | 57.500 | 80 | 28 | 2 | 227 | 300 | 6 | 85 | 1.23e-23 | 92.4 |
| MsG0480022657.01.T01 | MTR_8g088900 | 52.222 | 90 | 43 | 0 | 211 | 300 | 283 | 372 | 3.32e-21 | 92.8 |
| MsG0480022657.01.T01 | MTR_4g013230 | 62.121 | 66 | 22 | 1 | 235 | 300 | 78 | 140 | 4.21e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022657.01.T01 | AT5G64260 | 70.550 | 309 | 78 | 5 | 1 | 300 | 1 | 305 | 8.01e-153 | 430 |
| MsG0480022657.01.T01 | AT5G09440 | 62.500 | 304 | 84 | 8 | 1 | 300 | 1 | 278 | 3.72e-123 | 353 |
| MsG0480022657.01.T01 | AT4G08950 | 58.249 | 297 | 107 | 5 | 21 | 300 | 18 | 314 | 2.11e-120 | 348 |
| MsG0480022657.01.T01 | AT1G35140 | 57.401 | 277 | 106 | 4 | 35 | 299 | 32 | 308 | 3.28e-110 | 322 |
| MsG0480022657.01.T01 | AT5G51550 | 38.129 | 278 | 154 | 6 | 35 | 296 | 55 | 330 | 4.47e-49 | 166 |
| MsG0480022657.01.T01 | AT3G02970 | 33.110 | 299 | 158 | 7 | 41 | 298 | 33 | 330 | 1.26e-47 | 162 |
| MsG0480022657.01.T01 | AT2G35150 | 37.943 | 282 | 154 | 9 | 35 | 296 | 36 | 316 | 8.58e-42 | 147 |
| MsG0480022657.01.T01 | AT2G17230 | 36.071 | 280 | 159 | 8 | 35 | 296 | 79 | 356 | 1.27e-41 | 147 |
Find 100 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGAGAACTCCTTATATT+TGG | 0.165217 | 4:-75147906 | MsG0480022657.01.T01:CDS |
| GCGGGTCGGGTTCTTGTTGA+TGG | 0.264006 | 4:-75147622 | MsG0480022657.01.T01:CDS |
| GATAAACTTGGCTACACTTT+TGG | 0.278278 | 4:-75147761 | MsG0480022657.01.T01:CDS |
| GTTTACGAAATCAACGATTA+TGG | 0.306298 | 4:+75148212 | None:intergenic |
| CATAACGGCCAGCTTCTTAA+AGG | 0.308448 | 4:-75148288 | MsG0480022657.01.T01:CDS |
| ACACTTGGAAAGAATCTAAA+AGG | 0.309873 | 4:-75148069 | MsG0480022657.01.T01:CDS |
| CTTTAAGAAGCTGGCCGTTA+TGG | 0.326946 | 4:+75148289 | None:intergenic |
| TTCTATAACTGTTGTGCTTA+CGG | 0.335569 | 4:-75148004 | MsG0480022657.01.T01:CDS |
| TATAATGCCCACGGTGCTAA+TGG | 0.341608 | 4:-75147583 | MsG0480022657.01.T01:CDS |
| GCCTCAAGGGGCGCCGCCGC+TGG | 0.346930 | 4:+75147694 | None:intergenic |
| GTTTGGAAGTGGAGCTTATC+CGG | 0.353040 | 4:-75147650 | MsG0480022657.01.T01:CDS |
| CGATTATGGAGCGTTGGATT+GGG | 0.353404 | 4:+75148226 | None:intergenic |
| GGTGTCTGTGGTCCGTAAAT+AGG | 0.356716 | 4:+75147829 | None:intergenic |
| AGCGAGAACTCCTTATATTT+GGG | 0.363800 | 4:-75147905 | MsG0480022657.01.T01:CDS |
| GCGTTTCCAACCCAAATATA+AGG | 0.364348 | 4:+75147895 | None:intergenic |
| TGAAAATACCCGTTGTTAAA+CGG | 0.374082 | 4:+75147721 | None:intergenic |
| AAAAGGCCACGCGCATTGTC+CGG | 0.384613 | 4:+75147858 | None:intergenic |
| GTTCTACCTACACTCTCCTT+TGG | 0.384919 | 4:-75148348 | MsG0480022657.01.T01:CDS |
| AGCTCACCGTTAATCTAATC+TGG | 0.389734 | 4:-75148263 | MsG0480022657.01.T01:CDS |
| TCCGTACCAGATTAGATTAA+CGG | 0.397594 | 4:+75148257 | None:intergenic |
| ACGATTATGGAGCGTTGGAT+TGG | 0.409756 | 4:+75148225 | None:intergenic |
| GCATGCAAGACTCTCGTCTA+AGG | 0.415325 | 4:-75147517 | None:intergenic |
| CTACACCCTGCTTATACACT+TGG | 0.419437 | 4:-75148084 | MsG0480022657.01.T01:CDS |
| AACGGTGACGTTGGTGTTGA+CGG | 0.420282 | 4:-75147790 | MsG0480022657.01.T01:CDS |
| CTTATCCGGGTTACGCGGGT+CGG | 0.429586 | 4:-75147636 | MsG0480022657.01.T01:CDS |
| TTACGAATCCGTTTAACAAC+GGG | 0.434370 | 4:-75147729 | MsG0480022657.01.T01:CDS |
| CGGGTCGGGTTCTTGTTGAT+GGG | 0.443912 | 4:-75147621 | MsG0480022657.01.T01:CDS |
| TGAGCTTTCCTTTAAGAAGC+TGG | 0.450946 | 4:+75148280 | None:intergenic |
| TTCTTTCCAAGTGTATAAGC+AGG | 0.455827 | 4:+75148078 | None:intergenic |
| GCGAAAGATGTTAACGTTGA+AGG | 0.459961 | 4:-75147982 | MsG0480022657.01.T01:CDS |
| ACGGCGTGTACTGGTGTGTT+TGG | 0.462929 | 4:-75147667 | MsG0480022657.01.T01:CDS |
| GGTCCCACATCGCCGGCAAA+AGG | 0.475314 | 4:+75147551 | None:intergenic |
| AGAACTCCTTATATTTGGGT+TGG | 0.485130 | 4:-75147901 | MsG0480022657.01.T01:CDS |
| GATGTGGGACCCTCAAACTT+CGG | 0.490246 | 4:-75147539 | MsG0480022657.01.T01:CDS |
| ATAATGCCCACGGTGCTAAT+GGG | 0.490999 | 4:-75147582 | MsG0480022657.01.T01:CDS |
| AACGCTGAGACGCTCTGTCC+CGG | 0.491547 | 4:-75147877 | MsG0480022657.01.T01:CDS |
| CACGCGGAGGCTGATGGAAG+AGG | 0.494301 | 4:+75148168 | None:intergenic |
| TTCCATCAGCCTCCGCGTGG+TGG | 0.494962 | 4:-75148164 | MsG0480022657.01.T01:CDS |
| GAGGCTGTAACGGCGTGTAC+TGG | 0.495472 | 4:-75147676 | MsG0480022657.01.T01:CDS |
| TCTTGCATGCCGAAGTTTGA+GGG | 0.503332 | 4:+75147530 | None:intergenic |
| TTATCCGGGTTACGCGGGTC+GGG | 0.503941 | 4:-75147635 | MsG0480022657.01.T01:CDS |
| GTCTTGCATGCCGAAGTTTG+AGG | 0.507065 | 4:+75147529 | None:intergenic |
| AAAGGCCACGCGCATTGTCC+GGG | 0.507372 | 4:+75147859 | None:intergenic |
| GGCGCCCCTTGAGGCTGTAA+CGG | 0.510523 | 4:-75147686 | MsG0480022657.01.T01:CDS |
| CCGTAAATAGGTTGATGAAA+AGG | 0.512799 | 4:+75147841 | None:intergenic |
| GGTTCTGTCCGACGTGGCAA+CGG | 0.513391 | 4:-75147931 | MsG0480022657.01.T01:CDS |
| TGTACTGGTGTGTTTGGAAG+TGG | 0.514432 | 4:-75147661 | MsG0480022657.01.T01:CDS |
| TTTGGAAGTGGAGCTTATCC+GGG | 0.516439 | 4:-75147649 | MsG0480022657.01.T01:CDS |
| ACGGTGACGTTGGTGTTGAC+GGG | 0.523374 | 4:-75147789 | MsG0480022657.01.T01:CDS |
| TCAACACCAACGTCACCGTT+AGG | 0.525171 | 4:+75147793 | None:intergenic |
| GGCTGATGGAAGAGGCGCAC+CGG | 0.531178 | 4:+75148176 | None:intergenic |
| TTCCACCACGCGGAGGCTGA+TGG | 0.535382 | 4:+75148162 | None:intergenic |
| GGATCCTCTGCTCTTATCGT+AGG | 0.545765 | 4:-75148117 | MsG0480022657.01.T01:CDS |
| GTTTGAGGGTCCCACATCGC+CGG | 0.553736 | 4:+75147544 | None:intergenic |
| TACACGCCGTTACAGCCTCA+AGG | 0.556304 | 4:+75147680 | None:intergenic |
| CTTCCTCCCATTAGCACCGT+GGG | 0.556886 | 4:+75147576 | None:intergenic |
| GTTCTTGTTGATGGGGCAAG+TGG | 0.557525 | 4:-75147613 | MsG0480022657.01.T01:CDS |
| AGAACCCGACCCGCGTAACC+CGG | 0.558075 | 4:+75147631 | None:intergenic |
| TGGAGCTTATCCGGGTTACG+CGG | 0.558690 | 4:-75147641 | MsG0480022657.01.T01:CDS |
| TTCTTGTACAAGCTCTCCAA+AGG | 0.559281 | 4:+75148332 | None:intergenic |
| ACCGTTAATCTAATCTGGTA+CGG | 0.560213 | 4:-75148258 | MsG0480022657.01.T01:CDS |
| ACACGCCGTTACAGCCTCAA+GGG | 0.560503 | 4:+75147681 | None:intergenic |
| ACCAGCGGCGGCGCCCCTTG+AGG | 0.563174 | 4:-75147695 | MsG0480022657.01.T01:CDS |
| AATCAACGATTATGGAGCGT+TGG | 0.567660 | 4:+75148220 | None:intergenic |
| GATGGCAAAGTTGTAAATAG+AGG | 0.569676 | 4:+75148395 | None:intergenic |
| GATTCTGTATGAGTCGTTGT+GGG | 0.570975 | 4:-75147960 | MsG0480022657.01.T01:CDS |
| TCTGTCCGACGTGGCAACGG+TGG | 0.574227 | 4:-75147928 | MsG0480022657.01.T01:CDS |
| GATTATGGAGCGTTGGATTG+GGG | 0.576658 | 4:+75148227 | None:intergenic |
| CAAGTGTATAAGCAGGGTGT+AGG | 0.581110 | 4:+75148085 | None:intergenic |
| GCCACGTCGGACAGAACCAT+GGG | 0.589685 | 4:+75147936 | None:intergenic |
| TGATGGAAGAGGCGCACCGG+TGG | 0.590504 | 4:+75148179 | None:intergenic |
| GCAACTAACGGCGGTGTCTG+TGG | 0.596309 | 4:+75147817 | None:intergenic |
| GGGTCGGGTTCTTGTTGATG+GGG | 0.600065 | 4:-75147620 | MsG0480022657.01.T01:CDS |
| GATCCTCTGCTCTTATCGTA+GGG | 0.608173 | 4:-75148116 | MsG0480022657.01.T01:CDS |
| TGACGGGATGGTGATAAACT+TGG | 0.608872 | 4:-75147773 | MsG0480022657.01.T01:CDS |
| TGCCACGTCGGACAGAACCA+TGG | 0.609787 | 4:+75147935 | None:intergenic |
| TGACGTTGGTGTTGACGGGA+TGG | 0.610885 | 4:-75147785 | MsG0480022657.01.T01:CDS |
| TCTTTCCAAGTGTATAAGCA+GGG | 0.611108 | 4:+75148079 | None:intergenic |
| GTTACGAATCCGTTTAACAA+CGG | 0.616094 | 4:-75147730 | MsG0480022657.01.T01:CDS |
| CTTGTACTCAAGTACCATAA+CGG | 0.616114 | 4:-75148303 | MsG0480022657.01.T01:CDS |
| TTATGGTACTTGAGTACAAG+TGG | 0.616668 | 4:+75148306 | None:intergenic |
| GGAGCTTATCCGGGTTACGC+GGG | 0.618271 | 4:-75147640 | MsG0480022657.01.T01:CDS |
| GGATTCTGTATGAGTCGTTG+TGG | 0.618437 | 4:-75147961 | MsG0480022657.01.T01:CDS |
| GTAAACTCTCTCAGCACCAC+CGG | 0.619787 | 4:-75148195 | MsG0480022657.01.T01:CDS |
| ATGAGTCGTTGTGGGACCCA+TGG | 0.620367 | 4:-75147952 | MsG0480022657.01.T01:CDS |
| TCTGTCCCGGACAATGCGCG+TGG | 0.629534 | 4:-75147864 | MsG0480022657.01.T01:CDS |
| ATGCCCACGGTGCTAATGGG+AGG | 0.630632 | 4:-75147579 | MsG0480022657.01.T01:CDS |
| GTTGCTCCTAACGGTGACGT+TGG | 0.634818 | 4:-75147799 | MsG0480022657.01.T01:CDS |
| CACGCCGTTACAGCCTCAAG+GGG | 0.635869 | 4:+75147682 | None:intergenic |
| CCGCCGTTAGTTGCTCCTAA+CGG | 0.640396 | 4:-75147808 | MsG0480022657.01.T01:CDS |
| GGATCTAGCTATAATGCCCA+CGG | 0.645458 | 4:-75147592 | MsG0480022657.01.T01:CDS |
| ACCCATGGTTCTGTCCGACG+TGG | 0.645695 | 4:-75147937 | MsG0480022657.01.T01:CDS |
| TCGCTCCACCGTTGCCACGT+CGG | 0.658907 | 4:+75147923 | None:intergenic |
| CTCTTCCATCAGCCTCCGCG+TGG | 0.664341 | 4:-75148167 | MsG0480022657.01.T01:CDS |
| TCACCGTTAGGAGCAACTAA+CGG | 0.675396 | 4:+75147805 | None:intergenic |
| AGCTCTCCAAAGGAGAGTGT+AGG | 0.679417 | 4:+75148342 | None:intergenic |
| TTTCCCTACGATAAGAGCAG+AGG | 0.696161 | 4:+75148113 | None:intergenic |
| ACTTCCTCCCATTAGCACCG+TGG | 0.699326 | 4:+75147575 | None:intergenic |
| CAACACTGCAGAGAGAACGA+TGG | 0.723685 | 4:+75148377 | None:intergenic |
| CCGTTAGGAGCAACTAACGG+CGG | 0.783376 | 4:+75147808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAAAACTACTGAAAAATACA+AGG | - | Chr4:75147776-75147795 | MsG0480022657.01.T01:CDS | 25.0% |
| ACACTTGGAAAGAATCTAAA+AGG | - | Chr4:75147849-75147868 | MsG0480022657.01.T01:CDS | 30.0% | |
| ACTACTGAAAAATACAAGGT+AGG | - | Chr4:75147780-75147799 | MsG0480022657.01.T01:CDS | 30.0% | |
| GTTTACGAAATCAACGATTA+TGG | + | Chr4:75147709-75147728 | None:intergenic | 30.0% | |
| TGAAAATACCCGTTGTTAAA+CGG | + | Chr4:75148200-75148219 | None:intergenic | 30.0% | |
| TTCTATAACTGTTGTGCTTA+CGG | - | Chr4:75147914-75147933 | MsG0480022657.01.T01:CDS | 30.0% | |
| ! | CCTTTTCATCAACCTATTTA+CGG | - | Chr4:75148077-75148096 | MsG0480022657.01.T01:CDS | 30.0% |
| ! | TTTAACAACGGGTATTTTCA+GGG | - | Chr4:75148200-75148219 | MsG0480022657.01.T01:CDS | 30.0% |
| ACCGTTAATCTAATCTGGTA+CGG | - | Chr4:75147660-75147679 | MsG0480022657.01.T01:CDS | 35.0% | |
| AGAACTCCTTATATTTGGGT+TGG | - | Chr4:75148017-75148036 | MsG0480022657.01.T01:CDS | 35.0% | |
| AGCGAGAACTCCTTATATTT+GGG | - | Chr4:75148013-75148032 | MsG0480022657.01.T01:CDS | 35.0% | |
| CTTGTACTCAAGTACCATAA+CGG | - | Chr4:75147615-75147634 | MsG0480022657.01.T01:CDS | 35.0% | |
| GATGGCAAAGTTGTAAATAG+AGG | + | Chr4:75147526-75147545 | None:intergenic | 35.0% | |
| GTTACGAATCCGTTTAACAA+CGG | - | Chr4:75148188-75148207 | MsG0480022657.01.T01:CDS | 35.0% | |
| TCCGTACCAGATTAGATTAA+CGG | + | Chr4:75147664-75147683 | None:intergenic | 35.0% | |
| TCTTTCCAAGTGTATAAGCA+GGG | + | Chr4:75147842-75147861 | None:intergenic | 35.0% | |
| TTACGAATCCGTTTAACAAC+GGG | - | Chr4:75148189-75148208 | MsG0480022657.01.T01:CDS | 35.0% | |
| TTATGGTACTTGAGTACAAG+TGG | + | Chr4:75147615-75147634 | None:intergenic | 35.0% | |
| TTCTTTCCAAGTGTATAAGC+AGG | + | Chr4:75147843-75147862 | None:intergenic | 35.0% | |
| ! | GATAAACTTGGCTACACTTT+TGG | - | Chr4:75148157-75148176 | MsG0480022657.01.T01:CDS | 35.0% |
| ! | GTTTAACAACGGGTATTTTC+AGG | - | Chr4:75148199-75148218 | MsG0480022657.01.T01:CDS | 35.0% |
| !! | CCGTAAATAGGTTGATGAAA+AGG | + | Chr4:75148080-75148099 | None:intergenic | 35.0% |
| AATCAACGATTATGGAGCGT+TGG | + | Chr4:75147701-75147720 | None:intergenic | 40.0% | |
| AGCTCACCGTTAATCTAATC+TGG | - | Chr4:75147655-75147674 | MsG0480022657.01.T01:CDS | 40.0% | |
| GAGCGAGAACTCCTTATATT+TGG | - | Chr4:75148012-75148031 | MsG0480022657.01.T01:CDS | 40.0% | |
| GATTCTGTATGAGTCGTTGT+GGG | - | Chr4:75147958-75147977 | MsG0480022657.01.T01:CDS | 40.0% | |
| GCGAAAGATGTTAACGTTGA+AGG | - | Chr4:75147936-75147955 | MsG0480022657.01.T01:CDS | 40.0% | |
| GCGTTTCCAACCCAAATATA+AGG | + | Chr4:75148026-75148045 | None:intergenic | 40.0% | |
| TTCTTGTACAAGCTCTCCAA+AGG | + | Chr4:75147589-75147608 | None:intergenic | 40.0% | |
| ! | TGAGCTTTCCTTTAAGAAGC+TGG | + | Chr4:75147641-75147660 | None:intergenic | 40.0% |
| CAAGTGTATAAGCAGGGTGT+AGG | + | Chr4:75147836-75147855 | None:intergenic | 45.0% | |
| CATAACGGCCAGCTTCTTAA+AGG | - | Chr4:75147630-75147649 | MsG0480022657.01.T01:CDS | 45.0% | |
| CTACACCCTGCTTATACACT+TGG | - | Chr4:75147834-75147853 | MsG0480022657.01.T01:CDS | 45.0% | |
| GATCCTCTGCTCTTATCGTA+GGG | - | Chr4:75147802-75147821 | MsG0480022657.01.T01:CDS | 45.0% | |
| GGATCTAGCTATAATGCCCA+CGG | - | Chr4:75148326-75148345 | MsG0480022657.01.T01:CDS | 45.0% | |
| GGATTCTGTATGAGTCGTTG+TGG | - | Chr4:75147957-75147976 | MsG0480022657.01.T01:CDS | 45.0% | |
| GTTCTACCTACACTCTCCTT+TGG | - | Chr4:75147570-75147589 | MsG0480022657.01.T01:CDS | 45.0% | |
| GTTTGGAAGTGGAGCTTATC+CGG | - | Chr4:75148268-75148287 | MsG0480022657.01.T01:CDS | 45.0% | |
| TCACCGTTAGGAGCAACTAA+CGG | + | Chr4:75148116-75148135 | None:intergenic | 45.0% | |
| TCTTGCATGCCGAAGTTTGA+GGG | + | Chr4:75148391-75148410 | None:intergenic | 45.0% | |
| TGACGGGATGGTGATAAACT+TGG | - | Chr4:75148145-75148164 | MsG0480022657.01.T01:CDS | 45.0% | |
| TTTCCCTACGATAAGAGCAG+AGG | + | Chr4:75147808-75147827 | None:intergenic | 45.0% | |
| TTTGGAAGTGGAGCTTATCC+GGG | - | Chr4:75148269-75148288 | MsG0480022657.01.T01:CDS | 45.0% | |
| ! | AACTTGGCTACACTTTTGGC+TGG | - | Chr4:75148161-75148180 | MsG0480022657.01.T01:CDS | 45.0% |
| ! | ATAATGCCCACGGTGCTAAT+GGG | - | Chr4:75148336-75148355 | MsG0480022657.01.T01:CDS | 45.0% |
| ! | CTTTAAGAAGCTGGCCGTTA+TGG | + | Chr4:75147632-75147651 | None:intergenic | 45.0% |
| ! | TATAATGCCCACGGTGCTAA+TGG | - | Chr4:75148335-75148354 | MsG0480022657.01.T01:CDS | 45.0% |
| ! | TGTACTGGTGTGTTTGGAAG+TGG | - | Chr4:75148257-75148276 | MsG0480022657.01.T01:CDS | 45.0% |
| ! | TTCAGTAGTTTTCCACCACG+CGG | + | Chr4:75147769-75147788 | None:intergenic | 45.0% |
| !! | ACGATTATGGAGCGTTGGAT+TGG | + | Chr4:75147696-75147715 | None:intergenic | 45.0% |
| !! | CGATTATGGAGCGTTGGATT+GGG | + | Chr4:75147695-75147714 | None:intergenic | 45.0% |
| !! | GATTATGGAGCGTTGGATTG+GGG | + | Chr4:75147694-75147713 | None:intergenic | 45.0% |
| CAACACTGCAGAGAGAACGA+TGG | + | Chr4:75147544-75147563 | None:intergenic | 50.0% | |
| GATGTGGGACCCTCAAACTT+CGG | - | Chr4:75148379-75148398 | MsG0480022657.01.T01:CDS | 50.0% | |
| GGATCCTCTGCTCTTATCGT+AGG | - | Chr4:75147801-75147820 | MsG0480022657.01.T01:CDS | 50.0% | |
| GGTGTCTGTGGTCCGTAAAT+AGG | + | Chr4:75148092-75148111 | None:intergenic | 50.0% | |
| GTAAACTCTCTCAGCACCAC+CGG | - | Chr4:75147723-75147742 | MsG0480022657.01.T01:CDS | 50.0% | |
| GTCTTGCATGCCGAAGTTTG+AGG | + | Chr4:75148392-75148411 | None:intergenic | 50.0% | |
| TCAACACCAACGTCACCGTT+AGG | + | Chr4:75148128-75148147 | None:intergenic | 50.0% | |
| ! | AGCTCTCCAAAGGAGAGTGT+AGG | + | Chr4:75147579-75147598 | None:intergenic | 50.0% |
| ! | GTTCTTGTTGATGGGGCAAG+TGG | - | Chr4:75148305-75148324 | MsG0480022657.01.T01:CDS | 50.0% |
| !! | AACGGTGACGTTGGTGTTGA+CGG | - | Chr4:75148128-75148147 | MsG0480022657.01.T01:CDS | 50.0% |
| !!! | TGGGAGGAAGTACCTTTTGC+CGG | - | Chr4:75148355-75148374 | MsG0480022657.01.T01:CDS | 50.0% |
| AAAAGGCCACGCGCATTGTC+CGG | + | Chr4:75148063-75148082 | None:intergenic | 55.0% | |
| ACACGCCGTTACAGCCTCAA+GGG | + | Chr4:75148240-75148259 | None:intergenic | 55.0% | |
| ACTTCCTCCCATTAGCACCG+TGG | + | Chr4:75148346-75148365 | None:intergenic | 55.0% | |
| ATGAGTCGTTGTGGGACCCA+TGG | - | Chr4:75147966-75147985 | MsG0480022657.01.T01:CDS | 55.0% | |
| CCGCCGTTAGTTGCTCCTAA+CGG | - | Chr4:75148110-75148129 | MsG0480022657.01.T01:CDS | 55.0% | |
| CCGTTAGGAGCAACTAACGG+CGG | + | Chr4:75148113-75148132 | None:intergenic | 55.0% | |
| CGGGTCGGGTTCTTGTTGAT+GGG | - | Chr4:75148297-75148316 | MsG0480022657.01.T01:CDS | 55.0% | |
| CTTCCTCCCATTAGCACCGT+GGG | + | Chr4:75148345-75148364 | None:intergenic | 55.0% | |
| GGGTCGGGTTCTTGTTGATG+GGG | - | Chr4:75148298-75148317 | MsG0480022657.01.T01:CDS | 55.0% | |
| GTTGCTCCTAACGGTGACGT+TGG | - | Chr4:75148119-75148138 | MsG0480022657.01.T01:CDS | 55.0% | |
| TACACGCCGTTACAGCCTCA+AGG | + | Chr4:75148241-75148260 | None:intergenic | 55.0% | |
| TGGAGCTTATCCGGGTTACG+CGG | - | Chr4:75148277-75148296 | MsG0480022657.01.T01:CDS | 55.0% | |
| ! | ACGGCGTGTACTGGTGTGTT+TGG | - | Chr4:75148251-75148270 | MsG0480022657.01.T01:CDS | 55.0% |
| ! | AGTACCTTTTGCCGGCGATG+TGG | - | Chr4:75148363-75148382 | MsG0480022657.01.T01:CDS | 55.0% |
| ! | AGTAGTTTTCCACCACGCGG+AGG | + | Chr4:75147766-75147785 | None:intergenic | 55.0% |
| ! | GTACCTTTTGCCGGCGATGT+GGG | - | Chr4:75148364-75148383 | MsG0480022657.01.T01:CDS | 55.0% |
| !! | ACGGTGACGTTGGTGTTGAC+GGG | - | Chr4:75148129-75148148 | MsG0480022657.01.T01:CDS | 55.0% |
| !! | CGGGTATTTTCAGGGACCAG+CGG | - | Chr4:75148208-75148227 | MsG0480022657.01.T01:CDS | 55.0% |
| !! | GTATTTTCAGGGACCAGCGG+CGG | - | Chr4:75148211-75148230 | MsG0480022657.01.T01:CDS | 55.0% |
| !! | TGACGTTGGTGTTGACGGGA+TGG | - | Chr4:75148133-75148152 | MsG0480022657.01.T01:CDS | 55.0% |
| AAAGGCCACGCGCATTGTCC+GGG | + | Chr4:75148062-75148081 | None:intergenic | 60.0% | |
| AACGCTGAGACGCTCTGTCC+CGG | - | Chr4:75148041-75148060 | MsG0480022657.01.T01:CDS | 60.0% | |
| CACGCCGTTACAGCCTCAAG+GGG | + | Chr4:75148239-75148258 | None:intergenic | 60.0% | |
| CTTATCCGGGTTACGCGGGT+CGG | - | Chr4:75148282-75148301 | MsG0480022657.01.T01:CDS | 60.0% | |
| GAGGCTGTAACGGCGTGTAC+TGG | - | Chr4:75148242-75148261 | MsG0480022657.01.T01:CDS | 60.0% | |
| GCAACTAACGGCGGTGTCTG+TGG | + | Chr4:75148104-75148123 | None:intergenic | 60.0% | |
| GCCACGTCGGACAGAACCAT+GGG | + | Chr4:75147985-75148004 | None:intergenic | 60.0% | |
| GCGGGTCGGGTTCTTGTTGA+TGG | - | Chr4:75148296-75148315 | MsG0480022657.01.T01:CDS | 60.0% | |
| GGAGCTTATCCGGGTTACGC+GGG | - | Chr4:75148278-75148297 | MsG0480022657.01.T01:CDS | 60.0% | |
| GGTTCTGTCCGACGTGGCAA+CGG | - | Chr4:75147987-75148006 | MsG0480022657.01.T01:CDS | 60.0% | |
| GTTTGAGGGTCCCACATCGC+CGG | + | Chr4:75148377-75148396 | None:intergenic | 60.0% | |
| TGCCACGTCGGACAGAACCA+TGG | + | Chr4:75147986-75148005 | None:intergenic | 60.0% | |
| TTATCCGGGTTACGCGGGTC+GGG | - | Chr4:75148283-75148302 | MsG0480022657.01.T01:CDS | 60.0% | |
| ! | ACCCATGGTTCTGTCCGACG+TGG | - | Chr4:75147981-75148000 | MsG0480022657.01.T01:CDS | 60.0% |
| ! | ATGCCCACGGTGCTAATGGG+AGG | - | Chr4:75148339-75148358 | MsG0480022657.01.T01:CDS | 60.0% |
| AGAACCCGACCCGCGTAACC+CGG | + | Chr4:75148290-75148309 | None:intergenic | 65.0% | |
| CACGCGGAGGCTGATGGAAG+AGG | + | Chr4:75147753-75147772 | None:intergenic | 65.0% | |
| CTCTTCCATCAGCCTCCGCG+TGG | - | Chr4:75147751-75147770 | MsG0480022657.01.T01:CDS | 65.0% | |
| GGCGCCCCTTGAGGCTGTAA+CGG | - | Chr4:75148232-75148251 | MsG0480022657.01.T01:CDS | 65.0% | |
| GGTCCCACATCGCCGGCAAA+AGG | + | Chr4:75148370-75148389 | None:intergenic | 65.0% | |
| TCGCTCCACCGTTGCCACGT+CGG | + | Chr4:75147998-75148017 | None:intergenic | 65.0% | |
| TCTGTCCCGGACAATGCGCG+TGG | - | Chr4:75148054-75148073 | MsG0480022657.01.T01:CDS | 65.0% | |
| TCTGTCCGACGTGGCAACGG+TGG | - | Chr4:75147990-75148009 | MsG0480022657.01.T01:CDS | 65.0% | |
| TTCCACCACGCGGAGGCTGA+TGG | + | Chr4:75147759-75147778 | None:intergenic | 65.0% | |
| TTCCATCAGCCTCCGCGTGG+TGG | - | Chr4:75147754-75147773 | MsG0480022657.01.T01:CDS | 65.0% | |
| ! | GGCTGATGGAAGAGGCGCAC+CGG | + | Chr4:75147745-75147764 | None:intergenic | 65.0% |
| ! | TGATGGAAGAGGCGCACCGG+TGG | + | Chr4:75147742-75147761 | None:intergenic | 65.0% |
| ! | ACCAGCGGCGGCGCCCCTTG+AGG | - | Chr4:75148223-75148242 | MsG0480022657.01.T01:CDS | 80.0% |
| !!! | GCCTCAAGGGGCGCCGCCGC+TGG | + | Chr4:75148227-75148246 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 75147519 | 75148421 | 75147519 | ID=MsG0480022657.01;Name=MsG0480022657.01 |
| Chr4 | mRNA | 75147519 | 75148421 | 75147519 | ID=MsG0480022657.01.T01;Parent=MsG0480022657.01;Name=MsG0480022657.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|300 |
| Chr4 | exon | 75147519 | 75148421 | 75147519 | ID=MsG0480022657.01.T01:exon:11094;Parent=MsG0480022657.01.T01 |
| Chr4 | CDS | 75147519 | 75148421 | 75147519 | ID=MsG0480022657.01.T01:cds;Parent=MsG0480022657.01.T01 |
| Gene Sequence |
| Protein sequence |
