AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024797.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024797.01.T01 MTR_5g016630 100.000 159 0 0 1 159 1 159 2.47e-120 336
MsG0580024797.01.T01 MTR_4g094872 89.937 159 16 0 1 159 1 159 3.05e-110 310
MsG0580024797.01.T01 MTR_8g468530 41.558 154 83 2 1 154 17 163 8.00e-38 127
MsG0580024797.01.T01 MTR_4g108080 41.558 154 83 2 1 154 1 147 2.23e-37 125
MsG0580024797.01.T01 MTR_4g108080 46.154 104 54 1 51 154 46 147 1.89e-29 105
MsG0580024797.01.T01 MTR_1g021150 34.868 152 92 2 4 155 1 145 2.07e-27 100
MsG0580024797.01.T01 MTR_3g062450 33.553 152 94 2 4 155 1 145 4.86e-27 99.4
MsG0580024797.01.T01 MTR_5g075580 33.553 152 94 2 4 155 1 145 5.07e-27 99.4
MsG0580024797.01.T01 MTR_7g116940 33.553 152 94 2 4 155 1 145 1.88e-26 97.8
MsG0580024797.01.T01 MTR_8g071040 32.895 152 95 2 4 155 1 145 2.77e-26 97.4
MsG0580024797.01.T01 MTR_4g108080 41.880 117 61 2 1 117 1 110 8.03e-26 95.5
MsG0580024797.01.T01 MTR_4g073240 32.895 152 95 2 4 155 1 145 1.54e-25 95.5
MsG0580024797.01.T01 MTR_1g021150 36.364 132 81 2 24 155 25 153 5.08e-25 94.4
MsG0580024797.01.T01 MTR_5g075580 36.441 118 73 1 38 155 1 116 1.03e-24 92.4
MsG0580024797.01.T01 MTR_7g116940 32.704 159 93 3 4 155 1 152 3.67e-24 92.0
MsG0580024797.01.T01 MTR_4g073240 36.441 118 73 1 38 155 1 116 8.97e-24 90.1
MsG0580024797.01.T01 MTR_4g076200 35.616 146 86 3 8 153 36 173 1.78e-21 85.9
MsG0580024797.01.T01 MTR_5g009020 34.932 146 87 3 8 153 36 173 3.09e-21 85.1
MsG0580024797.01.T01 MTR_4g063490 32.558 129 76 2 37 154 33 161 6.01e-21 84.3
MsG0580024797.01.T01 MTR_2g096690 34.109 129 74 2 37 154 33 161 7.69e-21 84.0
MsG0580024797.01.T01 MTR_1g095510 39.167 120 69 3 32 151 12 127 1.65e-20 82.4
MsG0580024797.01.T01 MTR_1g095510 39.167 120 69 3 32 151 66 181 1.88e-20 83.6
MsG0580024797.01.T01 MTR_4g076200 36.641 131 75 3 23 153 10 132 1.94e-20 82.0
MsG0580024797.01.T01 MTR_8g085690 36.111 108 67 1 37 144 50 155 5.82e-20 81.6
MsG0580024797.01.T01 MTR_2g096690 34.109 129 73 3 37 154 33 160 1.42e-19 80.5
MsG0580024797.01.T01 MTR_3g098780 31.852 135 85 4 7 140 5 133 2.25e-18 78.2
MsG0580024797.01.T01 MTR_3g098780 31.852 135 85 4 7 140 29 157 3.47e-18 78.2
MsG0580024797.01.T01 MTR_2g078010 32.231 121 75 2 8 128 9 122 4.72e-18 76.3
MsG0580024797.01.T01 MTR_2g078010 28.667 150 100 2 8 157 9 151 5.72e-18 76.3
MsG0580024797.01.T01 MTR_7g116940 33.621 116 70 2 4 119 1 109 2.49e-17 73.9
MsG0580024797.01.T01 MTR_7g087590 30.986 142 91 3 8 149 14 148 7.39e-17 75.5
MsG0580024797.01.T01 MTR_1g095510 42.222 90 49 2 32 121 66 152 5.31e-16 71.6
MsG0580024797.01.T01 MTR_2g078010 32.353 102 67 1 56 157 66 165 9.83e-15 68.2
MsG0580024797.01.T01 MTR_3g110110 29.496 139 82 4 5 137 4 132 1.63e-14 67.4
MsG0580024797.01.T01 MTR_4g073240 36.709 79 48 1 77 155 7 83 6.38e-14 63.9
MsG0580024797.01.T01 MTR_2g096690 45.161 62 34 0 37 98 33 94 1.85e-13 63.5
MsG0580024797.01.T01 MTR_8g028920 30.000 120 80 3 38 155 29 146 3.04e-13 64.3
MsG0580024797.01.T01 MTR_5g021260 35.398 113 64 3 1 112 12 116 5.93e-13 63.2
MsG0580024797.01.T01 MTR_8g028920 33.333 105 66 3 53 155 5 107 5.98e-13 62.8
MsG0580024797.01.T01 MTR_5g019480 28.571 119 82 2 32 150 4 119 9.75e-13 62.0
MsG0580024797.01.T01 MTR_5g019480 28.571 119 82 2 32 150 52 167 1.44e-12 62.8
MsG0580024797.01.T01 MTR_5g019480 28.571 119 82 2 32 150 55 170 1.48e-12 62.8
MsG0580024797.01.T01 MTR_8g076490 34.513 113 65 3 1 112 12 116 1.66e-12 62.0
MsG0580024797.01.T01 MTR_2g078010 28.037 107 70 2 8 114 9 108 6.53e-12 59.3
MsG0580024797.01.T01 MTR_8g098595 29.730 111 74 3 47 155 23 131 3.01e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024797.01.T01 AT3G57870 87.975 158 19 0 2 159 3 160 1.56e-106 301
MsG0580024797.01.T01 AT2G02760 41.558 154 83 2 1 154 1 147 1.43e-37 126
MsG0580024797.01.T01 AT2G02760 41.558 154 83 2 1 154 1 147 1.43e-37 126
MsG0580024797.01.T01 AT2G02760 41.558 154 83 2 1 154 1 147 1.43e-37 126
MsG0580024797.01.T01 AT2G02760 41.558 154 83 2 1 154 1 147 1.43e-37 126
MsG0580024797.01.T01 AT1G14400 40.909 154 84 2 1 154 1 147 9.72e-37 124
MsG0580024797.01.T01 AT1G14400 40.909 154 84 2 1 154 1 147 9.72e-37 124
MsG0580024797.01.T01 AT5G62540 40.260 154 85 2 1 154 1 147 1.07e-34 119
MsG0580024797.01.T01 AT1G64230 34.211 152 93 2 4 155 1 145 1.96e-27 100
MsG0580024797.01.T01 AT1G64230 34.211 152 93 2 4 155 1 145 1.96e-27 100
MsG0580024797.01.T01 AT5G41700 34.211 152 93 2 4 155 1 145 2.12e-27 100
MsG0580024797.01.T01 AT5G41700 34.211 152 93 2 4 155 1 145 2.12e-27 100
MsG0580024797.01.T01 AT5G41700 34.211 152 93 2 4 155 1 145 2.12e-27 100
MsG0580024797.01.T01 AT1G64230 33.974 156 97 2 4 155 1 154 3.42e-27 100
MsG0580024797.01.T01 AT5G56150 33.553 152 94 2 4 155 1 145 8.19e-27 99.0
MsG0580024797.01.T01 AT4G27960 33.553 152 94 2 4 155 1 145 8.19e-27 99.0
MsG0580024797.01.T01 AT5G53300 33.553 152 94 2 4 155 1 145 1.21e-26 98.6
MsG0580024797.01.T01 AT5G53300 33.553 152 94 2 4 155 1 145 1.21e-26 98.6
MsG0580024797.01.T01 AT5G53300 33.553 152 94 2 4 155 1 145 1.21e-26 98.6
MsG0580024797.01.T01 AT4G27960 33.553 152 94 2 4 155 31 175 2.69e-26 98.6
MsG0580024797.01.T01 AT5G41700 33.553 152 95 2 4 155 1 146 2.73e-26 97.4
MsG0580024797.01.T01 AT3G08690 32.237 152 96 2 4 155 1 145 1.58e-25 95.5
MsG0580024797.01.T01 AT3G08690 32.237 152 96 2 4 155 1 145 1.58e-25 95.5
MsG0580024797.01.T01 AT3G08700 32.895 152 96 2 4 155 1 146 2.04e-25 95.1
MsG0580024797.01.T01 AT3G08700 32.895 152 96 2 4 155 1 146 2.04e-25 95.1
MsG0580024797.01.T01 AT1G64230 36.975 119 73 1 37 155 71 187 1.61e-24 94.0
MsG0580024797.01.T01 AT1G64230 36.975 119 73 1 37 155 71 187 1.61e-24 94.0
MsG0580024797.01.T01 AT2G16740 31.579 152 97 2 4 155 1 145 3.86e-24 92.0
MsG0580024797.01.T01 AT1G50490 41.026 117 66 2 37 153 63 176 5.47e-23 89.7
MsG0580024797.01.T01 AT3G20060 38.168 131 73 3 23 153 10 132 1.83e-22 87.4
MsG0580024797.01.T01 AT3G20060 36.301 146 85 3 8 153 40 177 2.38e-22 88.2
MsG0580024797.01.T01 AT3G46460 32.558 129 76 1 37 154 33 161 6.03e-21 84.3
MsG0580024797.01.T01 AT1G36340 37.719 114 69 1 37 150 35 146 9.80e-21 83.6
MsG0580024797.01.T01 AT1G36340 37.719 114 69 1 37 150 35 146 9.80e-21 83.6
MsG0580024797.01.T01 AT3G55380 32.558 129 76 1 37 154 34 162 3.76e-20 82.4
MsG0580024797.01.T01 AT5G59300 31.783 129 77 1 37 154 33 161 3.84e-20 82.0
MsG0580024797.01.T01 AT5G50870 33.333 147 82 5 4 141 2 141 4.55e-19 80.1
MsG0580024797.01.T01 AT5G50870 36.220 127 72 4 4 128 2 121 1.24e-18 79.0
MsG0580024797.01.T01 AT3G13550 32.773 119 78 1 37 155 64 180 3.09e-18 77.8
MsG0580024797.01.T01 AT1G16890 31.405 121 81 1 37 157 33 151 5.68e-18 76.3
MsG0580024797.01.T01 AT1G16890 31.405 121 81 1 37 157 42 160 7.58e-18 76.3
MsG0580024797.01.T01 AT3G46460 33.036 112 64 1 54 154 8 119 7.66e-18 75.1
MsG0580024797.01.T01 AT3G46460 33.036 112 64 1 54 154 8 119 7.66e-18 75.1
MsG0580024797.01.T01 AT1G78870 32.231 121 75 2 8 128 9 122 1.01e-17 75.5
MsG0580024797.01.T01 AT1G16890 31.624 117 78 1 41 157 4 118 1.57e-17 74.3
MsG0580024797.01.T01 AT5G41700 34.211 114 68 2 4 117 1 107 2.74e-17 74.3
MsG0580024797.01.T01 AT1G78870 31.624 117 78 1 41 157 4 118 2.98e-17 73.6
MsG0580024797.01.T01 AT5G25760 33.824 136 80 5 5 137 4 132 1.22e-16 72.8
MsG0580024797.01.T01 AT5G25760 33.824 136 80 5 5 137 4 132 1.22e-16 72.8
MsG0580024797.01.T01 AT5G53300 33.945 109 65 2 4 112 1 102 1.66e-16 71.2
MsG0580024797.01.T01 AT5G56150 32.727 110 67 2 4 113 1 103 1.96e-16 71.2
MsG0580024797.01.T01 AT5G05080 29.577 142 93 3 8 149 14 148 2.66e-16 73.9
MsG0580024797.01.T01 AT5G05080 29.577 142 93 3 8 149 14 148 2.66e-16 73.9
MsG0580024797.01.T01 AT5G05080 29.577 142 93 3 8 149 14 148 2.66e-16 73.9
MsG0580024797.01.T01 AT5G05080 29.577 142 93 3 8 149 14 148 2.66e-16 73.9
MsG0580024797.01.T01 AT3G13550 38.202 89 53 1 37 125 64 150 1.14e-15 70.5
MsG0580024797.01.T01 AT1G78870 31.356 118 78 2 41 157 4 119 1.71e-15 68.9
MsG0580024797.01.T01 AT2G46030 29.752 121 81 3 37 155 31 149 8.70e-14 65.9
MsG0580024797.01.T01 AT2G46030 29.752 121 81 3 37 155 31 149 8.70e-14 65.9
MsG0580024797.01.T01 AT2G46030 29.752 121 81 3 37 155 28 146 8.79e-14 65.9
MsG0580024797.01.T01 AT2G46030 29.752 121 81 3 37 155 28 146 8.79e-14 65.9
MsG0580024797.01.T01 AT4G36800 35.052 97 60 2 32 128 53 146 1.16e-13 65.5
MsG0580024797.01.T01 AT4G36800 35.052 97 60 2 32 128 53 146 1.16e-13 65.5
MsG0580024797.01.T01 AT2G46030 29.752 121 81 3 37 155 100 218 1.51e-13 66.6
MsG0580024797.01.T01 AT1G75440 36.283 113 63 3 1 112 12 116 2.08e-13 64.3
MsG0580024797.01.T01 AT3G55380 25.153 163 77 1 37 154 34 196 2.32e-13 65.1
MsG0580024797.01.T01 AT2G18600 28.571 119 82 2 32 150 54 169 2.93e-13 64.7
MsG0580024797.01.T01 AT2G18600 28.571 119 82 2 32 150 54 169 2.93e-13 64.7
MsG0580024797.01.T01 AT5G42990 34.513 113 65 3 1 112 12 116 3.24e-13 63.9
MsG0580024797.01.T01 AT5G41340 30.534 131 84 4 27 155 21 146 3.77e-13 64.3
MsG0580024797.01.T01 AT1G63800 30.000 120 80 3 38 155 14 131 4.58e-13 63.9
MsG0580024797.01.T01 AT1G63800 30.000 120 80 3 38 155 29 146 4.63e-13 63.9
MsG0580024797.01.T01 AT1G45050 35.398 113 64 3 1 112 12 116 6.08e-13 63.2
MsG0580024797.01.T01 AT3G24515 25.478 157 111 3 8 158 10 166 8.29e-13 65.1
MsG0580024797.01.T01 AT3G24515 27.586 116 82 1 45 158 76 191 1.19e-12 64.7
MsG0580024797.01.T01 AT5G41340 32.381 105 67 3 53 155 9 111 2.39e-12 61.6
MsG0580024797.01.T01 AT1G78870 28.037 107 70 2 8 114 9 108 8.47e-12 58.9
MsG0580024797.01.T01 AT4G36410 30.973 113 69 3 1 112 12 116 5.65e-11 58.2

Find 67 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGTGTGTTTCTCTGTTT+TGG 0.198250 5:-9850800 None:intergenic
TCTGTTTGGGCAGGGTCGGC+AGG 0.288355 5:-9853461 None:intergenic
TGGGCAGGGTCGGCAGGGTT+TGG 0.289293 5:-9853455 None:intergenic
GTGCCATCAGGATTAGTTTC+AGG 0.294643 5:-9850992 None:intergenic
TGCTCTATTCCTGGAAAGGC+TGG 0.303153 5:+9851037 MsG0580024797.01.T01:CDS
GTGCTATATGTGCTCACTTT+AGG 0.332156 5:+9853903 MsG0580024797.01.T01:exon
GTTCCAGATGGATACACATT+AGG 0.353940 5:-9853232 None:intergenic
ATTGATGGGGTATATTGTTT+CGG 0.365239 5:-9850652 None:intergenic
ATAGATGATATCCTTCTGTT+TGG 0.365717 5:-9853475 None:intergenic
GCATGGCATTGCTCTATTCC+TGG 0.367991 5:+9851028 MsG0580024797.01.T01:CDS
GCGATTACCCCAGCCTTTCC+AGG 0.374909 5:-9851046 None:intergenic
AGTAAATTATCCATTTCTAT+AGG 0.376649 5:-9854127 None:intergenic
ATCAAATTGATTGTGCCATC+AGG 0.394540 5:-9851004 None:intergenic
CACCCTAATGTGTATCCATC+TGG 0.401306 5:+9853229 MsG0580024797.01.T01:CDS
CTTTAGGAAATATCCTAGTA+TGG 0.402125 5:+9853919 MsG0580024797.01.T01:three_prime_UTR
TTGGCTGATCAAGCAGGTCT+TGG 0.405631 5:-9853436 None:intergenic
TGGTACATTTCCTATAGAAA+TGG 0.413562 5:+9854117 MsG0580024797.01.T01:three_prime_UTR
TGCATTTGCCGCAGACTGAT+TGG 0.415528 5:+9853119 MsG0580024797.01.T01:intron
TGATATCCTTCTGTTTGGGC+AGG 0.423017 5:-9853470 None:intergenic
TAGATGATATCCTTCTGTTT+GGG 0.423210 5:-9853474 None:intergenic
TTACACTTTGGTGGTTTGCT+AGG 0.425467 5:-9853187 None:intergenic
TGATGGCACAATCAATTTGA+TGG 0.440534 5:+9851006 MsG0580024797.01.T01:CDS
AAAACAACAGCTGCCATACT+AGG 0.447693 5:-9853932 None:intergenic
CTGTTTGGGCAGGGTCGGCA+GGG 0.448451 5:-9853460 None:intergenic
AAGTACATTGCAATAAGATT+AGG 0.449728 5:+9850734 MsG0580024797.01.T01:five_prime_UTR
ATTTGCTTCACTGTTATAGC+TGG 0.450918 5:-9853401 None:intergenic
GCATTTGCCGCAGACTGATT+GGG 0.456810 5:+9853120 MsG0580024797.01.T01:intron
TGGCTATTACCCACTGACTA+TGG 0.458954 5:+9853147 MsG0580024797.01.T01:CDS
TTGCTTGTCTATACTTAATG+AGG 0.462267 5:+9853258 MsG0580024797.01.T01:CDS
ACTTGTTGGCGATACTTCAC+TGG 0.463351 5:+9854097 MsG0580024797.01.T01:three_prime_UTR
TTCCAGATGGATACACATTA+GGG 0.466067 5:-9853231 None:intergenic
CACAAACACTCAAACATGTC+TGG 0.479757 5:+9850816 MsG0580024797.01.T01:exon
AGTCAACGAATAATACTTGT+TGG 0.490168 5:+9854083 MsG0580024797.01.T01:three_prime_UTR
TGAGGGAATTTACACTTTGG+TGG 0.494788 5:-9853196 None:intergenic
TCCTTCTGTTTGGGCAGGGT+CGG 0.496610 5:-9853465 None:intergenic
TTTGATTTGATTTGATTGAT+GGG 0.498527 5:-9850666 None:intergenic
TACACTTTGGTGGTTTGCTA+GGG 0.523028 5:-9853186 None:intergenic
GCTCTATTCCTGGAAAGGCT+GGG 0.525549 5:+9851038 MsG0580024797.01.T01:CDS
ACAGTGAAGCAAATCCTTGT+GGG 0.536488 5:+9853410 MsG0580024797.01.T01:CDS
CCTTGAGGGAATTTACACTT+TGG 0.536806 5:-9853199 None:intergenic
CCGCAGACTGATTGGGAAGG+TGG 0.537892 5:+9853127 MsG0580024797.01.T01:intron
GCACAATCAATTTGATGGCA+TGG 0.539659 5:+9851011 MsG0580024797.01.T01:CDS
GTATATTGTTTCGGAAACTA+CGG 0.540225 5:-9850643 None:intergenic
CAGGGTTTGGCTGATCAAGC+AGG 0.542481 5:-9853442 None:intergenic
CTCTATTCCTGGAAAGGCTG+GGG 0.551837 5:+9851039 MsG0580024797.01.T01:CDS
AGGATATCATCTATTCATCC+AGG 0.555859 5:+9853484 MsG0580024797.01.T01:CDS
TTGATTTGATTTGATTGATG+GGG 0.557991 5:-9850665 None:intergenic
AACAGTGAAGCAAATCCTTG+TGG 0.569117 5:+9853409 MsG0580024797.01.T01:CDS
GATATCCTTCTGTTTGGGCA+GGG 0.574166 5:-9853469 None:intergenic
TAGGGTGGAAGAAACCTTGA+GGG 0.574913 5:-9853213 None:intergenic
TGCTCGTGGTCGTCTTGCTG+AGG 0.582818 5:+9850842 MsG0580024797.01.T01:CDS
GCATTGCTCTATTCCTGGAA+AGG 0.586152 5:+9851033 MsG0580024797.01.T01:CDS
GCCGACCCTGCCCAAACAGA+AGG 0.591961 5:+9853464 MsG0580024797.01.T01:CDS
GACAAGCAAACAGTTCCAGA+TGG 0.593655 5:-9853244 None:intergenic
ATATAGCACTAGATAATAGA+CGG 0.593797 5:-9853889 None:intergenic
CCAAAGTGTAAATTCCCTCA+AGG 0.603400 5:+9853199 MsG0580024797.01.T01:CDS
TTGCTGAGGAACGAAAATCA+TGG 0.607851 5:+9850856 MsG0580024797.01.T01:CDS
CACTGAAGACCATAGTCAGT+GGG 0.613316 5:-9853156 None:intergenic
AACATGTCTGGTATTGCTCG+TGG 0.617118 5:+9850828 MsG0580024797.01.T01:exon
AAGCCTGAAACTAATCCTGA+TGG 0.618441 5:+9850989 MsG0580024797.01.T01:CDS
TATAGCACTAGATAATAGAC+GGG 0.633902 5:-9853888 None:intergenic
TTGCCGCAGACTGATTGGGA+AGG 0.640092 5:+9853124 MsG0580024797.01.T01:intron
CAGATGGATACACATTAGGG+TGG 0.664595 5:-9853228 None:intergenic
TCACTGAAGACCATAGTCAG+TGG 0.665523 5:-9853157 None:intergenic
TTAGGGTGGAAGAAACCTTG+AGG 0.683744 5:-9853214 None:intergenic
GCAGGTCTTGGATACCCACA+AGG 0.703119 5:-9853424 None:intergenic
CTGAGGAACGAAAATCATGG+AGG 0.738075 5:+9850859 MsG0580024797.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATATTAACAATTCTTA+CGG - Chr5:9853562-9853581 None:intergenic 15.0%
!! TATTTCATTAATCAAGTATT+GGG + Chr5:9851966-9851985 MsG0580024797.01.T01:intron 15.0%
!! TGTAAATATAAAACAATCAA+GGG + Chr5:9851341-9851360 MsG0580024797.01.T01:intron 15.0%
!! TTATTTCATTAATCAAGTAT+TGG + Chr5:9851965-9851984 MsG0580024797.01.T01:intron 15.0%
!!! TGATTTTTGATTTCAATTTA+GGG + Chr5:9850956-9850975 MsG0580024797.01.T01:intron 15.0%
!!! TTGATTTTTGATTTCAATTT+AGG + Chr5:9850955-9850974 MsG0580024797.01.T01:intron 15.0%
!! AAACACTAGTAATATTCTAA+GGG + Chr5:9852347-9852366 MsG0580024797.01.T01:intron 20.0%
!! AAATTACGTTATGCAAAATA+GGG - Chr5:9851736-9851755 None:intergenic 20.0%
!! ACAGAAAATATTATTACGTA+AGG - Chr5:9853819-9853838 None:intergenic 20.0%
!! ACATCAATTGTAAATATTGA+TGG - Chr5:9852807-9852826 None:intergenic 20.0%
!! AGTAAATTATCCATTTCTAT+AGG - Chr5:9854130-9854149 None:intergenic 20.0%
!! ATATCCATTTGAAAAATGAA+GGG - Chr5:9853526-9853545 None:intergenic 20.0%
!! CTCAAATTATTATTTGTGTT+GGG + Chr5:9851217-9851236 MsG0580024797.01.T01:intron 20.0%
!! CTGTAAATATAAAACAATCA+AGG + Chr5:9851340-9851359 MsG0580024797.01.T01:intron 20.0%
!! GACATTATAATAGTTTCAAA+TGG - Chr5:9853319-9853338 None:intergenic 20.0%
!! TAAAAAACAGAGAAAAATGT+AGG - Chr5:9850907-9850926 None:intergenic 20.0%
!! TATATCCATTTGAAAAATGA+AGG - Chr5:9853527-9853546 None:intergenic 20.0%
!! TCTCAAATTATTATTTGTGT+TGG + Chr5:9851216-9851235 MsG0580024797.01.T01:intron 20.0%
!!! TACGTAATAATATTTTCTGT+AGG + Chr5:9853819-9853838 MsG0580024797.01.T01:intron 20.0%
!!! TCATTTTTCAAATGGATATA+CGG + Chr5:9853527-9853546 MsG0580024797.01.T01:intron 20.0%
!!! TTGACTATTTTTATTTACTC+AGG + Chr5:9854027-9854046 MsG0580024797.01.T01:three_prime_UTR 20.0%
!!! TTTATTTTGTTCTTCAACAT+TGG - Chr5:9852442-9852461 None:intergenic 20.0%
!!! TTTGATTTGATTTGATTGAT+GGG - Chr5:9850669-9850688 None:intergenic 20.0%
!!! TTTTGATTTGATTTGATTGA+TGG - Chr5:9850670-9850689 None:intergenic 20.0%
! AAAAAAATATGCAACACCTT+AGG - Chr5:9851947-9851966 None:intergenic 25.0%
! AAAATGTAGGAAATTACATG+AGG - Chr5:9850894-9850913 None:intergenic 25.0%
! AAACGTGTTAAGAATTAACA+TGG + Chr5:9851807-9851826 MsG0580024797.01.T01:intron 25.0%
! AACACTAGTAATATTCTAAG+GGG + Chr5:9852348-9852367 MsG0580024797.01.T01:intron 25.0%
! AACTATAGCCAATTAGATTA+GGG + Chr5:9853668-9853687 MsG0580024797.01.T01:intron 25.0%
! AAGGATAGTAAAATAAGAAG+TGG + Chr5:9852158-9852177 MsG0580024797.01.T01:intron 25.0%
! AAGTACATTGCAATAAGATT+AGG + Chr5:9850734-9850753 MsG0580024797.01.T01:five_prime_UTR 25.0%
! AATAACAAAGAGACATAGAA+TGG - Chr5:9852064-9852083 None:intergenic 25.0%
! AGAGAAAAGATATAGGAAAT+CGG - Chr5:9852501-9852520 None:intergenic 25.0%
! ATATAGCACTAGATAATAGA+CGG - Chr5:9853892-9853911 None:intergenic 25.0%
! ATCCTTAAGAGAAAAGATAT+AGG - Chr5:9852508-9852527 None:intergenic 25.0%
! ATTAGGGAAAATTCGAAATA+TGG + Chr5:9852582-9852601 MsG0580024797.01.T01:intron 25.0%
! ATTATCATTCTTGCATGTTT+AGG + Chr5:9853370-9853389 MsG0580024797.01.T01:intron 25.0%
! CAAACACTAGTAATATTCTA+AGG + Chr5:9852346-9852365 MsG0580024797.01.T01:intron 25.0%
! CAAATTACGTTATGCAAAAT+AGG - Chr5:9851737-9851756 None:intergenic 25.0%
! CAGGTTATACATATTACATA+CGG - Chr5:9851616-9851635 None:intergenic 25.0%
! CTTAGAATATTACTAGTGTT+TGG - Chr5:9852348-9852367 None:intergenic 25.0%
! TAAGAATTAACATGGTATGT+TGG + Chr5:9851902-9851921 MsG0580024797.01.T01:intron 25.0%
! TCAATTGTAAACCTAATACA+AGG - Chr5:9853042-9853061 None:intergenic 25.0%
! TTATCATTCTTGCATGTTTA+GGG + Chr5:9853371-9853390 MsG0580024797.01.T01:intron 25.0%
! TTATGTTTGTAAATGTTGAG+TGG + Chr5:9852927-9852946 MsG0580024797.01.T01:intron 25.0%
! TTCACACAGAAACAAAAAAA+GGG + Chr5:9850767-9850786 MsG0580024797.01.T01:five_prime_UTR 25.0%
! TTTCACACAGAAACAAAAAA+AGG + Chr5:9850766-9850785 MsG0580024797.01.T01:five_prime_UTR 25.0%
!! ATATTTCGAATTTTCCCTAA+TGG - Chr5:9852583-9852602 None:intergenic 25.0%
!! TAAACCAATCTAAAACTCTT+TGG - Chr5:9852213-9852232 None:intergenic 25.0%
!! TAATTGAATTAGTGATAGTG+TGG + Chr5:9851495-9851514 MsG0580024797.01.T01:intron 25.0%
!! TATTTCGAATTTTCCCTAAT+GGG - Chr5:9852582-9852601 None:intergenic 25.0%
!! TTCCTATATCTTTTCTCTTA+AGG + Chr5:9852503-9852522 MsG0580024797.01.T01:intron 25.0%
!!! AATACCCTTCATTTTTCAAA+TGG + Chr5:9853519-9853538 MsG0580024797.01.T01:intron 25.0%
!!! ATTAATCAAGTATTGGGTTA+TGG + Chr5:9851972-9851991 MsG0580024797.01.T01:intron 25.0%
!!! ATTGAAGAGTTTTAGATTTG+TGG + Chr5:9852309-9852328 MsG0580024797.01.T01:intron 25.0%
!!! TAACACGTTTTAGTTAAAGT+CGG - Chr5:9851797-9851816 None:intergenic 25.0%
!!! TATTTTTATTTACTCAGGTC+TGG + Chr5:9854032-9854051 MsG0580024797.01.T01:three_prime_UTR 25.0%
!!! TTGATTTGATTTGATTGATG+GGG - Chr5:9850668-9850687 None:intergenic 25.0%
AATAAATCCTATCACAGTCT+TGG + Chr5:9852456-9852475 MsG0580024797.01.T01:intron 30.0%
AATCAAGGGATAACTAGAAT+TGG + Chr5:9851355-9851374 MsG0580024797.01.T01:intron 30.0%
ACAATTGATGTTAACTGACA+AGG + Chr5:9852816-9852835 MsG0580024797.01.T01:intron 30.0%
AGTCAACGAATAATACTTGT+TGG + Chr5:9854083-9854102 MsG0580024797.01.T01:three_prime_UTR 30.0%
ATAGATGATATCCTTCTGTT+TGG - Chr5:9853478-9853497 None:intergenic 30.0%
ATTATTATTTGTGTTGGGTC+TGG + Chr5:9851222-9851241 MsG0580024797.01.T01:intron 30.0%
ATTGATGGGGTATATTGTTT+CGG - Chr5:9850655-9850674 None:intergenic 30.0%
CCAGTATCAGAAATAAAGTA+TGG - Chr5:9852721-9852740 None:intergenic 30.0%
CTTATACAAAATAAGTCCCA+GGG - Chr5:9852024-9852043 None:intergenic 30.0%
GAACTATAGCCAATTAGATT+AGG + Chr5:9853667-9853686 MsG0580024797.01.T01:intron 30.0%
GTATATTGTTTCGGAAACTA+CGG - Chr5:9850646-9850665 None:intergenic 30.0%
TAATATGTTTGCTCTTCAAG+TGG + Chr5:9853572-9853591 MsG0580024797.01.T01:intron 30.0%
TAGATGATATCCTTCTGTTT+GGG - Chr5:9853477-9853496 None:intergenic 30.0%
TATAGCACTAGATAATAGAC+GGG - Chr5:9853891-9853910 None:intergenic 30.0%
TATCATTCTTGCATGTTTAG+GGG + Chr5:9853372-9853391 MsG0580024797.01.T01:intron 30.0%
TATGTGCCTGAATTTATGTT+AGG + Chr5:9851313-9851332 MsG0580024797.01.T01:intron 30.0%
TATTACATACGGAATAAGCT+TGG - Chr5:9851605-9851624 None:intergenic 30.0%
TGGTACATTTCCTATAGAAA+TGG + Chr5:9854117-9854136 MsG0580024797.01.T01:three_prime_UTR 30.0%
TTAAGGATTCAGAGTAGAAT+TGG + Chr5:9852520-9852539 MsG0580024797.01.T01:intron 30.0%
TTCAATACAATCACATGTGT+CGG - Chr5:9851185-9851204 None:intergenic 30.0%
TTGAATATTCCCAAGTTTGA+AGG + Chr5:9851520-9851539 MsG0580024797.01.T01:intron 30.0%
TTGCTTGTCTATACTTAATG+AGG + Chr5:9853258-9853277 MsG0580024797.01.T01:CDS 30.0%
TTTAAGCACCCTAATCTAAT+TGG - Chr5:9853679-9853698 None:intergenic 30.0%
TTTGAAGGACTTGTAGTTTA+AGG + Chr5:9851535-9851554 MsG0580024797.01.T01:intron 30.0%
! ACACTAGTAATATTCTAAGG+GGG + Chr5:9852349-9852368 MsG0580024797.01.T01:intron 30.0%
! CACTTTTATGAAACCCATTA+GGG + Chr5:9852566-9852585 MsG0580024797.01.T01:intron 30.0%
! CTTTAGGAAATATCCTAGTA+TGG + Chr5:9853919-9853938 MsG0580024797.01.T01:three_prime_UTR 30.0%
! TTCAATTTTTACCAGGTTAC+TGG - Chr5:9852414-9852433 None:intergenic 30.0%
!! CCATACTTTATTTCTGATAC+TGG + Chr5:9852718-9852737 MsG0580024797.01.T01:intron 30.0%
!! GCTATTTTACAACAATGTTC+AGG - Chr5:9851635-9851654 None:intergenic 30.0%
!! GTTTTAGATTTGTGGTTTGA+TGG + Chr5:9852317-9852336 MsG0580024797.01.T01:intron 30.0%
!! TGAAAAATGAAGGGTATTTC+AGG - Chr5:9853517-9853536 None:intergenic 30.0%
!! TTGTTTTACCATTTCTTGCT+CGG + Chr5:9853948-9853967 MsG0580024797.01.T01:three_prime_UTR 30.0%
AAATAAAGTATGGATGCAGC+AGG - Chr5:9852711-9852730 None:intergenic 35.0%
AAATAGCAGCTATAGTGCTA+TGG + Chr5:9851648-9851667 MsG0580024797.01.T01:intron 35.0%
AACAATTCTTACGGAACAGT+GGG - Chr5:9853553-9853572 None:intergenic 35.0%
AACTACAAGTCCTTCAAACT+TGG - Chr5:9851533-9851552 None:intergenic 35.0%
ACTACAAGTCCTTCAAACTT+GGG - Chr5:9851532-9851551 None:intergenic 35.0%
ACTGGACTTGATTTCATTGA+AGG - Chr5:9852396-9852415 None:intergenic 35.0%
AGGATATCATCTATTCATCC+AGG + Chr5:9853484-9853503 MsG0580024797.01.T01:CDS 35.0%
AGTCGTCCTAACATAAATTC+AGG - Chr5:9851322-9851341 None:intergenic 35.0%
ATCAAATTGATTGTGCCATC+AGG - Chr5:9851007-9851026 None:intergenic 35.0%
ATTTGCTTCACTGTTATAGC+TGG - Chr5:9853404-9853423 None:intergenic 35.0%
CTAAATTACTCTCACCAACA+AGG - Chr5:9851388-9851407 None:intergenic 35.0%
GAGTTGTTAACTAGGTAGTT+AGG - Chr5:9852622-9852641 None:intergenic 35.0%
GCTAAAACGTTGTCAAATAG+TGG + Chr5:9851693-9851712 MsG0580024797.01.T01:intron 35.0%
GCTTATACAAAATAAGTCCC+AGG - Chr5:9852025-9852044 None:intergenic 35.0%
GTTTGTAAATGTTGAGTGGT+TGG + Chr5:9852931-9852950 MsG0580024797.01.T01:intron 35.0%
TAACAATTCTTACGGAACAG+TGG - Chr5:9853554-9853573 None:intergenic 35.0%
TAACACAGTGCAATAAGAGT+AGG + Chr5:9853608-9853627 MsG0580024797.01.T01:intron 35.0%
TCAATCACGAGTTGTTAACT+AGG - Chr5:9852630-9852649 None:intergenic 35.0%
TGATGGCACAATCAATTTGA+TGG + Chr5:9851006-9851025 MsG0580024797.01.T01:CDS 35.0%
TTCCAGATGGATACACATTA+GGG - Chr5:9853234-9853253 None:intergenic 35.0%
TTGTGTTTGTGCTTCATAGA+CGG + Chr5:9851246-9851265 MsG0580024797.01.T01:intron 35.0%
! AAGTAACGACTTTTCTCCTA+AGG + Chr5:9851928-9851947 MsG0580024797.01.T01:intron 35.0%
! ACCAATCTAAAACTCTTTGG+TGG - Chr5:9852210-9852229 None:intergenic 35.0%
! ATATTTTCTGTAGGATGCTG+TGG + Chr5:9853828-9853847 MsG0580024797.01.T01:intron 35.0%
! GGAGTATTATTCAACTAGAC+AGG - Chr5:9851584-9851603 None:intergenic 35.0%
! GTTTGTGTGTTTCTCTGTTT+TGG - Chr5:9850803-9850822 None:intergenic 35.0%
! TAGTAATATTCTAAGGGGGT+CGG + Chr5:9852353-9852372 MsG0580024797.01.T01:intron 35.0%
! TCAGTTAGCTCTTATCATAC+AGG - Chr5:9852768-9852787 None:intergenic 35.0%
!! CCACTTTTATGAAACCCATT+AGG + Chr5:9852565-9852584 MsG0580024797.01.T01:intron 35.0%
!! CCTAATGGGTTTCATAAAAG+TGG - Chr5:9852568-9852587 None:intergenic 35.0%
!! GGTTGCTTTCAATTTTTACC+AGG - Chr5:9852421-9852440 None:intergenic 35.0%
!! TATTGTCAGAAGTGTCTTGT+TGG + Chr5:9851417-9851436 MsG0580024797.01.T01:intron 35.0%
!!! TCCACCAAAGAGTTTTAGAT+TGG + Chr5:9852206-9852225 MsG0580024797.01.T01:intron 35.0%
AAAACAACAGCTGCCATACT+AGG - Chr5:9853935-9853954 None:intergenic 40.0%
AACAGTGAAGCAAATCCTTG+TGG + Chr5:9853409-9853428 MsG0580024797.01.T01:CDS 40.0%
AAGCCTGAAACTAATCCTGA+TGG + Chr5:9850989-9851008 MsG0580024797.01.T01:CDS 40.0%
ACAAACAAATACAAGCACCC+TGG - Chr5:9853780-9853799 None:intergenic 40.0%
ACACTTCTAATCGAAGGCAA+AGG + Chr5:9851122-9851141 MsG0580024797.01.T01:intron 40.0%
ACAGTGAAGCAAATCCTTGT+GGG + Chr5:9853410-9853429 MsG0580024797.01.T01:CDS 40.0%
ACATAGAATGGCACTGCAAA+TGG - Chr5:9852052-9852071 None:intergenic 40.0%
ATGATCTGCTTGCTCAACAT+TGG + Chr5:9853062-9853081 MsG0580024797.01.T01:intron 40.0%
CACAAACACTCAAACATGTC+TGG + Chr5:9850816-9850835 MsG0580024797.01.T01:exon 40.0%
CAGACAAACGTGTCAAACAT+CGG - Chr5:9851153-9851172 None:intergenic 40.0%
CCAAAGTGTAAATTCCCTCA+AGG + Chr5:9853199-9853218 MsG0580024797.01.T01:CDS 40.0%
CCTTGAGGGAATTTACACTT+TGG - Chr5:9853202-9853221 None:intergenic 40.0%
CTAATACAAGGCATAACCTC+AGG - Chr5:9853030-9853049 None:intergenic 40.0%
CTGAGGTTATGCCTTGTATT+AGG + Chr5:9853028-9853047 MsG0580024797.01.T01:intron 40.0%
GAATTGGATTGTTGCCTTGT+TGG + Chr5:9851371-9851390 MsG0580024797.01.T01:intron 40.0%
GCTATAGTGCTATGGTATAG+CGG + Chr5:9851656-9851675 MsG0580024797.01.T01:intron 40.0%
GTGCTATATGTGCTCACTTT+AGG + Chr5:9853903-9853922 MsG0580024797.01.T01:exon 40.0%
GTGGTGTGTGTGATTATTGA+AGG - Chr5:9852549-9852568 None:intergenic 40.0%
GTTCCAGATGGATACACATT+AGG - Chr5:9853235-9853254 None:intergenic 40.0%
TAGAAAACCCGTTCAATCAC+AGG - Chr5:9852103-9852122 None:intergenic 40.0%
TCAGGCACATATGACAACTA+GGG - Chr5:9851304-9851323 None:intergenic 40.0%
TCCACTGAACATTTGACTGA+AGG + Chr5:9852139-9852158 MsG0580024797.01.T01:intron 40.0%
TCCTTCAGTCAAATGTTCAG+TGG - Chr5:9852143-9852162 None:intergenic 40.0%
TCTTGTTGCCTGTGATTGAA+CGG + Chr5:9852092-9852111 MsG0580024797.01.T01:intron 40.0%
TGAAATCAAGTCCAGTAACC+TGG + Chr5:9852400-9852419 MsG0580024797.01.T01:intron 40.0%
TGAGGGAATTTACACTTTGG+TGG - Chr5:9853199-9853218 None:intergenic 40.0%
TGATCTGCTTGCTCAACATT+GGG + Chr5:9853063-9853082 MsG0580024797.01.T01:intron 40.0%
TTCACATGCTTCTGAATCTG+TGG + Chr5:9853341-9853360 MsG0580024797.01.T01:intron 40.0%
TTCAGGCACATATGACAACT+AGG - Chr5:9851305-9851324 None:intergenic 40.0%
TTGCTGAGGAACGAAAATCA+TGG + Chr5:9850856-9850875 MsG0580024797.01.T01:CDS 40.0%
! AGTAATATTCTAAGGGGGTC+GGG + Chr5:9852354-9852373 MsG0580024797.01.T01:intron 40.0%
! CTAATTAGCACTTTTCCCCA+CGG + Chr5:9853719-9853738 MsG0580024797.01.T01:intron 40.0%
! GCACAATCAATTTGATGGCA+TGG + Chr5:9851011-9851030 MsG0580024797.01.T01:CDS 40.0%
! GTTGGAGTTTTGCGTTTGTT+AGG + Chr5:9851435-9851454 MsG0580024797.01.T01:intron 40.0%
! TTGCCTTCGATTAGAAGTGT+TGG - Chr5:9851122-9851141 None:intergenic 40.0%
!! AAAGTCGGTGTTGTCAATCA+CGG - Chr5:9851782-9851801 None:intergenic 40.0%
!! CTGATACTGGTGTTGTACAA+TGG + Chr5:9852731-9852750 MsG0580024797.01.T01:intron 40.0%
!! GGTATTTCAGGTTATCTACC+TGG - Chr5:9853505-9853524 None:intergenic 40.0%
!! GTGGGGAAAAGTGCTAATTA+GGG - Chr5:9853720-9853739 None:intergenic 40.0%
!! TACACTTTGGTGGTTTGCTA+GGG - Chr5:9853189-9853208 None:intergenic 40.0%
!! TTACACTTTGGTGGTTTGCT+AGG - Chr5:9853190-9853209 None:intergenic 40.0%
!! TTTTAGCACCGAGCAAGAAA+TGG - Chr5:9853959-9853978 None:intergenic 40.0%
!!! ATGACATGCAGACGCTTTTT+TGG + Chr5:9854002-9854021 MsG0580024797.01.T01:three_prime_UTR 40.0%
AACAAATACAAGCACCCTGG+AGG - Chr5:9853777-9853796 None:intergenic 45.0%
AACATGTCTGGTATTGCTCG+TGG + Chr5:9850828-9850847 MsG0580024797.01.T01:exon 45.0%
ATGTCACATTCTGCTACCTG+AGG + Chr5:9853011-9853030 MsG0580024797.01.T01:intron 45.0%
CAATGCACCAAGACTGTGAT+AGG - Chr5:9852466-9852485 None:intergenic 45.0%
CACCCTAATGTGTATCCATC+TGG + Chr5:9853229-9853248 MsG0580024797.01.T01:CDS 45.0%
CACTGAAGACCATAGTCAGT+GGG - Chr5:9853159-9853178 None:intergenic 45.0%
CAGATGGATACACATTAGGG+TGG - Chr5:9853231-9853250 None:intergenic 45.0%
CATTCTTGCATGTTTAGGGG+TGG + Chr5:9853375-9853394 MsG0580024797.01.T01:intron 45.0%
CTGAGGAACGAAAATCATGG+AGG + Chr5:9850859-9850878 MsG0580024797.01.T01:CDS 45.0%
CTTGTTGCCTGTGATTGAAC+GGG + Chr5:9852093-9852112 MsG0580024797.01.T01:intron 45.0%
GACAAGCAAACAGTTCCAGA+TGG - Chr5:9853247-9853266 None:intergenic 45.0%
GATATCCTTCTGTTTGGGCA+GGG - Chr5:9853472-9853491 None:intergenic 45.0%
GCACCAACACTTCTAATCGA+AGG + Chr5:9851116-9851135 MsG0580024797.01.T01:intron 45.0%
GCATTGCTCTATTCCTGGAA+AGG + Chr5:9851033-9851052 MsG0580024797.01.T01:CDS 45.0%
TAGGGTGGAAGAAACCTTGA+GGG - Chr5:9853216-9853235 None:intergenic 45.0%
TCACTGAAGACCATAGTCAG+TGG - Chr5:9853160-9853179 None:intergenic 45.0%
TGATATCCTTCTGTTTGGGC+AGG - Chr5:9853473-9853492 None:intergenic 45.0%
TTAGGGTGGAAGAAACCTTG+AGG - Chr5:9853217-9853236 None:intergenic 45.0%
! AATCAGCGTCAAGAAAGCGT+TGG - Chr5:9852685-9852704 None:intergenic 45.0%
! ACTTGTTGGCGATACTTCAC+TGG + Chr5:9854097-9854116 MsG0580024797.01.T01:three_prime_UTR 45.0%
! TGAGTGGTTGGTCAGTAGTT+TGG + Chr5:9852943-9852962 MsG0580024797.01.T01:intron 45.0%
! TGGCTATTACCCACTGACTA+TGG + Chr5:9853147-9853166 MsG0580024797.01.T01:CDS 45.0%
!! AAAGTCGGTGTTGTCAATCG+CGG - Chr5:9851869-9851888 None:intergenic 45.0%
!! ACTAGGTAGTTAGGTGCTGA+TGG - Chr5:9852613-9852632 None:intergenic 45.0%
!! CGTGGGGAAAAGTGCTAATT+AGG - Chr5:9853721-9853740 None:intergenic 45.0%
!! GGAAAAGTGCTAATTAGGGC+GGG - Chr5:9853716-9853735 None:intergenic 45.0%
!! GGGAAAAGTGCTAATTAGGG+CGG - Chr5:9853717-9853736 None:intergenic 45.0%
!! GTGCCATCAGGATTAGTTTC+AGG - Chr5:9850995-9851014 None:intergenic 45.0%
!! TAGAAGTGTTGGTGCTACAG+AGG - Chr5:9851111-9851130 None:intergenic 45.0%
AAGCCTCATTCCACTGAGTG+GGG - Chr5:9852274-9852293 None:intergenic 50.0%
ACCATGAAACCAGTCCTCCA+GGG + Chr5:9853760-9853779 MsG0580024797.01.T01:intron 50.0%
ATGTAACCTACCCCACTCAG+TGG + Chr5:9852261-9852280 MsG0580024797.01.T01:intron 50.0%
CAAGCCTCATTCCACTGAGT+GGG - Chr5:9852275-9852294 None:intergenic 50.0%
CTCTATTCCTGGAAAGGCTG+GGG + Chr5:9851039-9851058 MsG0580024797.01.T01:CDS 50.0%
GCATGGCATTGCTCTATTCC+TGG + Chr5:9851028-9851047 MsG0580024797.01.T01:CDS 50.0%
GCATTTGCCGCAGACTGATT+GGG + Chr5:9853120-9853139 MsG0580024797.01.T01:intron 50.0%
GCTCTATTCCTGGAAAGGCT+GGG + Chr5:9851038-9851057 MsG0580024797.01.T01:CDS 50.0%
GTCCAAATGACCTAAGCCGT+GGG - Chr5:9853738-9853757 None:intergenic 50.0%
TACCATGAAACCAGTCCTCC+AGG + Chr5:9853759-9853778 MsG0580024797.01.T01:intron 50.0%
TCAAGCCTCATTCCACTGAG+TGG - Chr5:9852276-9852295 None:intergenic 50.0%
TCCAAATGACCTAAGCCGTG+GGG - Chr5:9853737-9853756 None:intergenic 50.0%
TGCATTTGCCGCAGACTGAT+TGG + Chr5:9853119-9853138 MsG0580024797.01.T01:intron 50.0%
TGCTCTATTCCTGGAAAGGC+TGG + Chr5:9851037-9851056 MsG0580024797.01.T01:CDS 50.0%
TTGGCTGATCAAGCAGGTCT+TGG - Chr5:9853439-9853458 None:intergenic 50.0%
! GGTGTTGTCAATCACGGTCT+TGG - Chr5:9851776-9851795 None:intergenic 50.0%
!! TGCTTATTGACTCTCGCCCT+GGG + Chr5:9852005-9852024 MsG0580024797.01.T01:intron 50.0%
!! TGGAGGACTGGTTTCATGGT+AGG - Chr5:9853760-9853779 None:intergenic 50.0%
!! TTGCTTATTGACTCTCGCCC+TGG + Chr5:9852004-9852023 MsG0580024797.01.T01:intron 50.0%
ATACAAGCACCCTGGAGGAC+TGG - Chr5:9853772-9853791 None:intergenic 55.0%
CAGGGTTTGGCTGATCAAGC+AGG - Chr5:9853445-9853464 None:intergenic 55.0%
CCACCTTCCCAATCAGTCTG+CGG - Chr5:9853130-9853149 None:intergenic 55.0%
CTACCCCACTCAGTGGAATG+AGG + Chr5:9852268-9852287 MsG0580024797.01.T01:intron 55.0%
CTCATTCCACTGAGTGGGGT+AGG - Chr5:9852270-9852289 None:intergenic 55.0%
GCAGGTCTTGGATACCCACA+AGG - Chr5:9853427-9853446 None:intergenic 55.0%
GGTCCAAATGACCTAAGCCG+TGG - Chr5:9853739-9853758 None:intergenic 55.0%
TCCCCACGGCTTAGGTCATT+TGG + Chr5:9853733-9853752 MsG0580024797.01.T01:intron 55.0%
TCCTTCTGTTTGGGCAGGGT+CGG - Chr5:9853468-9853487 None:intergenic 55.0%
TTGCCGCAGACTGATTGGGA+AGG + Chr5:9853124-9853143 MsG0580024797.01.T01:intron 55.0%
! AGCACTTTTCCCCACGGCTT+AGG + Chr5:9853725-9853744 MsG0580024797.01.T01:intron 55.0%
! GGTGTTGTCAATCGCGGTCT+TGG - Chr5:9851863-9851882 None:intergenic 55.0%
!! ACCCTGGAGGACTGGTTTCA+TGG - Chr5:9853764-9853783 None:intergenic 55.0%
CCGCAGACTGATTGGGAAGG+TGG + Chr5:9853127-9853146 MsG0580024797.01.T01:intron 60.0%
GCGATTACCCCAGCCTTTCC+AGG - Chr5:9851049-9851068 None:intergenic 60.0%
TGCTCGTGGTCGTCTTGCTG+AGG + Chr5:9850842-9850861 MsG0580024797.01.T01:CDS 60.0%
CTGTTTGGGCAGGGTCGGCA+GGG - Chr5:9853463-9853482 None:intergenic 65.0%
GCCGACCCTGCCCAAACAGA+AGG + Chr5:9853464-9853483 MsG0580024797.01.T01:CDS 65.0%
TCTGTTTGGGCAGGGTCGGC+AGG - Chr5:9853464-9853483 None:intergenic 65.0%
TGGGCAGGGTCGGCAGGGTT+TGG - Chr5:9853458-9853477 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9850629 9854175 9850629 ID=MsG0580024797.01;Name=MsG0580024797.01
Chr5 mRNA 9850629 9854175 9850629 ID=MsG0580024797.01.T01;Parent=MsG0580024797.01;Name=MsG0580024797.01.T01;_AED=0.39;_eAED=0.39;_QI=202|1|1|1|1|1|5|272|159
Chr5 exon 9850629 9850896 9850629 ID=MsG0580024797.01.T01:exon:2926;Parent=MsG0580024797.01.T01
Chr5 exon 9850977 9851060 9850977 ID=MsG0580024797.01.T01:exon:2927;Parent=MsG0580024797.01.T01
Chr5 exon 9853133 9853285 9853133 ID=MsG0580024797.01.T01:exon:2928;Parent=MsG0580024797.01.T01
Chr5 exon 9853392 9853505 9853392 ID=MsG0580024797.01.T01:exon:2929;Parent=MsG0580024797.01.T01
Chr5 exon 9853841 9854175 9853841 ID=MsG0580024797.01.T01:exon:2930;Parent=MsG0580024797.01.T01
Chr5 five_prime_UTR 9850629 9850830 9850629 ID=MsG0580024797.01.T01:five_prime_utr;Parent=MsG0580024797.01.T01
Chr5 CDS 9850831 9850896 9850831 ID=MsG0580024797.01.T01:cds;Parent=MsG0580024797.01.T01
Chr5 CDS 9850977 9851060 9850977 ID=MsG0580024797.01.T01:cds;Parent=MsG0580024797.01.T01
Chr5 CDS 9853133 9853285 9853133 ID=MsG0580024797.01.T01:cds;Parent=MsG0580024797.01.T01
Chr5 CDS 9853392 9853505 9853392 ID=MsG0580024797.01.T01:cds;Parent=MsG0580024797.01.T01
Chr5 CDS 9853841 9853903 9853841 ID=MsG0580024797.01.T01:cds;Parent=MsG0580024797.01.T01
Chr5 three_prime_UTR 9853904 9854175 9853904 ID=MsG0580024797.01.T01:three_prime_utr;Parent=MsG0580024797.01.T01
Gene Sequence

>MsG0580024797.01.T01

ATGTCTGGTATTGCTCGTGGTCGTCTTGCTGAGGAACGAAAATCATGGAGGAAGAATCATCCTCATGGTTTCGTTGCTAAGCCTGAAACTAATCCTGATGGCACAATCAATTTGATGGCATGGCATTGCTCTATTCCTGGAAAGGCTGGGACTGATTGGGAAGGTGGCTATTACCCACTGACTATGGTCTTCAGTGAAGACTACCCTAGCAAACCACCAAAGTGTAAATTCCCTCAAGGTTTCTTCCACCCTAATGTGTATCCATCTGGAACTGTTTGCTTGTCTATACTTAATGAGGATAATGGGTGGAGACCAGCTATAACAGTGAAGCAAATCCTTGTGGGTATCCAAGACCTGCTTGATCAGCCAAACCCTGCCGACCCTGCCCAAACAGAAGGATATCATCTATTCATCCAGGATGCTGTGGAGTATAAAAGAAGAGTCAAGCAGCAAGCAAAGCAATACCCGTCTATTATCTAG
Protein sequence

>MsG0580024797.01.T01

MSGIARGRLAEERKSWRKNHPHGFVAKPETNPDGTINLMAWHCSIPGKAGTDWEGGYYPLTMVFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKRRVKQQAKQYPSII*