AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025425.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025425.01.T01 MTR_5g028190 70.467 535 112 7 139 630 1 532 0.0 732
MsG0580025425.01.T01 MTR_5g028130 75.964 337 77 2 297 630 1 336 1.87e-179 515
MsG0580025425.01.T01 MTR_5g028450 65.986 294 94 2 338 627 1 292 2.37e-126 378
MsG0580025425.01.T01 MTR_5g028930 36.687 646 294 16 61 626 2 612 6.43e-109 344
MsG0580025425.01.T01 MTR_5g028110 70.213 188 38 1 443 630 4 173 5.88e-84 263
MsG0580025425.01.T01 MTR_2g438740 32.778 540 320 14 119 629 41 566 7.65e-78 261
MsG0580025425.01.T01 MTR_5g091220 32.574 571 316 14 120 625 31 597 3.68e-69 238
MsG0580025425.01.T01 MTR_2g438440 29.968 624 357 15 64 625 76 681 1.04e-67 236
MsG0580025425.01.T01 MTR_6g017215 57.609 184 78 0 441 624 6 189 1.71e-63 212
MsG0580025425.01.T01 MTR_2g438400 30.354 537 327 13 123 625 17 540 1.73e-62 219
MsG0580025425.01.T01 MTR_2g438640 27.139 678 414 16 17 625 20 686 4.78e-61 218
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 55 333 6.83e-61 209
MsG0580025425.01.T01 MTR_2g438720 27.903 663 389 20 37 625 40 687 7.44e-61 218
MsG0580025425.01.T01 MTR_2g438700 27.854 657 395 17 37 625 40 685 1.53e-60 217
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 118 396 1.68e-60 209
MsG0580025425.01.T01 MTR_2g438760 30.864 486 308 11 119 589 47 519 6.77e-60 212
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 170 448 8.77e-60 209
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 198 476 1.28e-59 209
MsG0580025425.01.T01 MTR_3g455790 29.840 563 309 15 120 612 33 579 1.43e-59 212
MsG0580025425.01.T01 MTR_5g028690 49.010 202 98 1 436 632 36 237 1.64e-59 201
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 196 474 1.80e-59 209
MsG0580025425.01.T01 MTR_3g055310 40.000 290 163 3 336 625 223 501 1.83e-59 209
MsG0580025425.01.T01 MTR_2g438640 26.254 678 394 16 17 625 20 660 3.29e-55 201
MsG0580025425.01.T01 MTR_3g452020 27.337 567 345 13 120 623 33 595 5.34e-51 188
MsG0580025425.01.T01 MTR_5g028510 46.637 223 107 5 24 245 6 217 4.74e-49 176
MsG0580025425.01.T01 MTR_3g452020 30.286 350 236 5 266 611 58 403 2.84e-44 165
MsG0580025425.01.T01 MTR_5g028900 51.282 156 64 2 442 597 3 146 2.25e-42 151
MsG0580025425.01.T01 MTR_2g020510 36.364 275 165 3 337 611 389 653 2.12e-41 161
MsG0580025425.01.T01 MTR_5g028840 45.161 186 93 1 441 626 2 178 5.53e-41 149
MsG0580025425.01.T01 MTR_3g058570 32.899 307 183 5 337 630 83 379 1.13e-37 145
MsG0580025425.01.T01 MTR_2g020450 33.793 290 187 4 337 625 392 677 3.70e-36 145
MsG0580025425.01.T01 MTR_2g020470 34.307 274 150 5 338 611 392 635 2.22e-35 143
MsG0580025425.01.T01 MTR_5g028830 46.575 146 75 2 296 440 145 288 3.87e-33 129
MsG0580025425.01.T01 MTR_1g113820 28.764 445 270 15 130 550 63 484 1.54e-32 134
MsG0580025425.01.T01 MTR_3g050500 29.126 309 208 5 325 625 414 719 1.63e-32 134
MsG0580025425.01.T01 MTR_3g051060 29.010 293 203 3 339 627 435 726 3.88e-31 130
MsG0580025425.01.T01 MTR_2g017930 31.544 298 192 5 331 625 352 640 1.57e-30 128
MsG0580025425.01.T01 MTR_5g085360 27.941 340 198 8 325 622 388 722 1.04e-29 126
MsG0580025425.01.T01 MTR_5g085350 31.164 292 195 4 338 625 437 726 9.61e-29 123
MsG0580025425.01.T01 MTR_5g085350 31.164 292 195 4 338 625 424 713 1.00e-28 123
MsG0580025425.01.T01 MTR_2g438640 37.097 186 115 2 441 625 399 583 1.90e-28 121
MsG0580025425.01.T01 MTR_5g028920 44.521 146 77 2 298 443 86 227 3.08e-28 114
MsG0580025425.01.T01 MTR_5g085340 29.592 294 201 3 337 625 442 734 1.65e-27 119
MsG0580025425.01.T01 MTR_1g113760 25.052 479 313 16 129 583 29 485 1.02e-23 106
MsG0580025425.01.T01 MTR_2g438470 40.741 135 77 2 383 517 366 497 1.45e-21 99.4
MsG0580025425.01.T01 MTR_1g113730 29.018 224 146 5 310 531 23 235 1.06e-18 89.0
MsG0580025425.01.T01 MTR_6g016185 29.302 215 128 8 350 563 6 197 2.04e-15 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025425.01.T01 AT3G18670 35.638 564 311 14 99 627 35 581 2.01e-103 329
MsG0580025425.01.T01 AT3G18670 43.713 334 181 5 297 627 307 636 2.17e-85 283
MsG0580025425.01.T01 AT3G18670 30.519 154 91 7 99 249 35 175 1.16e-11 68.6
MsG0580025425.01.T01 AT5G04690 31.607 560 321 14 110 625 66 607 2.88e-68 236
MsG0580025425.01.T01 AT5G04690 30.139 574 331 14 110 625 66 627 1.06e-65 230
MsG0580025425.01.T01 AT5G35810 40.996 261 146 3 338 592 35 293 2.29e-61 210
MsG0580025425.01.T01 AT5G04730 36.228 334 208 4 295 625 253 584 3.43e-59 211
MsG0580025425.01.T01 AT5G04700 37.538 333 202 5 296 625 322 651 8.25e-58 208
MsG0580025425.01.T01 AT5G04690 37.462 331 200 5 296 625 317 641 5.77e-56 203
MsG0580025425.01.T01 AT5G04680 28.646 576 332 15 119 625 67 632 1.70e-55 201
MsG0580025425.01.T01 AT5G04680 27.966 590 332 14 119 625 67 646 6.80e-53 194
MsG0580025425.01.T01 AT5G04680 33.724 341 212 5 296 625 186 523 4.07e-50 184
MsG0580025425.01.T01 AT5G04680 33.724 341 212 5 296 625 338 675 4.69e-49 184
MsG0580025425.01.T01 AT3G54065 46.512 172 86 1 427 592 8 179 1.11e-45 163
MsG0580025425.01.T01 AT5G04700 30.612 147 98 3 296 441 322 465 2.67e-12 70.1

Find 162 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCACTTGGCAGGATATTT+AGG 0.127030 5:-18363878 MsG0580025425.01.T01:CDS
CCAAAGAATTCAAGAGTTTA+AGG 0.157617 5:-18364155 MsG0580025425.01.T01:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5:-18362870 MsG0580025425.01.T01:CDS
CTTCGCTATATTCGTGTTTC+CGG 0.221535 5:+18365805 None:intergenic
CCTTAAACTCTTGAATTCTT+TGG 0.238324 5:+18364155 None:intergenic
TAAAGAAGCCTGGAATAAAT+TGG 0.241875 5:-18366405 MsG0580025425.01.T01:CDS
ATACATGATGCAACTGTAAA+TGG 0.242921 5:-18363950 MsG0580025425.01.T01:CDS
TTAGAACGCGCACCAATTTC+AGG 0.251761 5:+18366533 None:intergenic
AGAAGAAAATGAACGTTTAA+TGG 0.256998 5:-18362319 MsG0580025425.01.T01:CDS
AATATATTCCACATCCTCTA+TGG 0.260429 5:-18365966 MsG0580025425.01.T01:CDS
ATAGAAAACTTACCCTTTAC+TGG 0.266848 5:+18364654 None:intergenic
GTACCTTGCTGATTTGGTTT+TGG 0.271672 5:-18360356 MsG0580025425.01.T01:CDS
AGGCGGTGGAGGATTATCTT+AGG 0.281820 5:-18362410 MsG0580025425.01.T01:CDS
TGAGGGGTACCTTGCTGATT+TGG 0.284152 5:-18360362 MsG0580025425.01.T01:CDS
ATCTTCTCGGTTGTTTCTTT+AGG 0.292046 5:-18364708 MsG0580025425.01.T01:CDS
GTGACCTCTATTCCTGAAAT+TGG 0.292763 5:-18366545 MsG0580025425.01.T01:CDS
TATATACCTTGCTCAATATC+TGG 0.305429 5:+18366350 None:intergenic
TGCACTTGGCAGGATATTTA+GGG 0.308043 5:-18363877 MsG0580025425.01.T01:CDS
ACTTCGGTCCTTCTCTTCAT+TGG 0.319322 5:-18363010 MsG0580025425.01.T01:CDS
AATTGTATCCATCAGGAATA+AGG 0.321064 5:-18364237 MsG0580025425.01.T01:intron
CTTCACGTTGCGGTAGTTGC+TGG 0.322177 5:-18365932 MsG0580025425.01.T01:CDS
GCTCTTGTTGCTGAGCTTAC+CGG 0.335463 5:-18365824 MsG0580025425.01.T01:CDS
CTAAGACTGAATATGAGATT+TGG 0.338368 5:-18366514 MsG0580025425.01.T01:CDS
CTGAGGATTATTAATCTTCT+CGG 0.338560 5:-18364721 MsG0580025425.01.T01:CDS
AGGGTAATCCTGACCTCTTA+TGG 0.352153 5:-18364045 MsG0580025425.01.T01:CDS
CCAAAGACAACTACGAAAAC+TGG 0.369243 5:-18366616 MsG0580025425.01.T01:CDS
CGAGGAAATTGTGAAGAAAT+TGG 0.372095 5:-18365906 MsG0580025425.01.T01:CDS
ATGCAAACTCGTTTATTAAG+AGG 0.378242 5:-18366000 MsG0580025425.01.T01:CDS
AACAGGGATTTCACCATCAT+TGG 0.379563 5:+18365724 None:intergenic
TGGTGAAAGCTGGGGAGAAA+TGG 0.379583 5:-18363213 MsG0580025425.01.T01:CDS
TGTTCTTCTTGCTGCTGCTA+AGG 0.379583 5:-18365705 MsG0580025425.01.T01:CDS
TCACATGTCATTTCAGAATT+CGG 0.380455 5:-18364403 MsG0580025425.01.T01:intron
CATAGCAAGTGAAGCACAAA+AGG 0.393011 5:+18362880 None:intergenic
TTTCAGCGTAACGAGCTGTT+AGG 0.396370 5:+18362984 None:intergenic
AGTTGCACCCAATTTATTCC+AGG 0.399506 5:+18366397 None:intergenic
CACAAGGAGCTGGTGAAAGC+TGG 0.403742 5:-18363223 MsG0580025425.01.T01:CDS
GCTGCAGCTTTCACTGTCCC+TGG 0.408383 5:-18363130 MsG0580025425.01.T01:CDS
TTAGCAGCAGCAAGAAGAAC+AGG 0.410668 5:+18365707 None:intergenic
AGAAACTATCTTGTGGGAAA+TGG 0.412760 5:-18366581 MsG0580025425.01.T01:CDS
TAGAAACCACAGAGAAGAAA+AGG 0.416389 5:+18362912 None:intergenic
AAATGCCGTGTAGACGCATT+TGG 0.419337 5:-18363911 MsG0580025425.01.T01:CDS
AATTCCATGTTGCACTTGGC+AGG 0.419647 5:-18363887 MsG0580025425.01.T01:CDS
ATCAGAACTTAGAGAGGCTT+CGG 0.421195 5:-18364131 MsG0580025425.01.T01:CDS
GGGTAATCCTGACCTCTTAT+GGG 0.423361 5:-18364044 MsG0580025425.01.T01:CDS
CTAATATGAGTAAGATTCTC+TGG 0.424630 5:+18366443 None:intergenic
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5:-18362869 MsG0580025425.01.T01:CDS
CATTGGTCTTCATAGATAAC+AGG 0.427879 5:+18365741 None:intergenic
ACCTTAGTGGCAATGACTTA+AGG 0.429666 5:+18362954 None:intergenic
AGATGCAAAGAGAAATTCTA+TGG 0.430747 5:-18363814 MsG0580025425.01.T01:CDS
TTCACGTTGCGGTAGTTGCT+GGG 0.432176 5:-18365931 MsG0580025425.01.T01:CDS
TCTCTTTGCATCTGCATAGC+AGG 0.438079 5:+18363824 None:intergenic
GAGATTTGGAACAGGAAGAA+TGG 0.441267 5:-18366500 MsG0580025425.01.T01:CDS
ACATGTGTCGGTTGAAAGTT+GGG 0.442957 5:-18362385 MsG0580025425.01.T01:CDS
CTGAATATGAGATTTGGAAC+AGG 0.444534 5:-18366508 MsG0580025425.01.T01:CDS
GTTCTTCTTGCTGCTGCTAA+GGG 0.445513 5:-18365704 MsG0580025425.01.T01:CDS
CTTGTTAGAAACTATCTTGT+GGG 0.447319 5:-18366587 MsG0580025425.01.T01:CDS
TGTGCATCGATTTATATTGA+AGG 0.449238 5:+18366050 None:intergenic
GACGGAACTAGAACGATAAC+AGG 0.453839 5:+18362803 None:intergenic
TTGAATTTATCGCCAGTAAA+GGG 0.457760 5:-18364666 MsG0580025425.01.T01:intron
TATAGCGAAGTGTATGACTA+TGG 0.458675 5:-18365792 MsG0580025425.01.T01:CDS
TCCTTAAGTCATTGCCACTA+AGG 0.460081 5:-18362955 MsG0580025425.01.T01:CDS
AACATGTGTCGGTTGAAAGT+TGG 0.461068 5:-18362386 MsG0580025425.01.T01:CDS
TCAATGGCCCATAAGAGGTC+AGG 0.465739 5:+18364037 None:intergenic
GTTTATAGATGCAATGAGAA+AGG 0.467103 5:-18364065 MsG0580025425.01.T01:CDS
GTTGAATTTATCGCCAGTAA+AGG 0.472588 5:-18364667 MsG0580025425.01.T01:CDS
TTCATATTGCTAAAGAAGCC+TGG 0.477292 5:-18366415 MsG0580025425.01.T01:CDS
TCTTGTGGGAAATGGTCTGT+GGG 0.478192 5:-18366573 MsG0580025425.01.T01:CDS
AAAGAAGCCTGGAATAAATT+GGG 0.481257 5:-18366404 MsG0580025425.01.T01:CDS
ACAAGGAGCTGGTGAAAGCT+GGG 0.481894 5:-18363222 MsG0580025425.01.T01:CDS
GGTGAAAGCTGGGGAGAAAT+GGG 0.482292 5:-18363212 MsG0580025425.01.T01:CDS
AGCTGGTTCATTTACTCTTG+TGG 0.482801 5:-18363179 MsG0580025425.01.T01:CDS
AGATTTGGAACAGGAAGAAT+GGG 0.485550 5:-18366499 MsG0580025425.01.T01:CDS
TAAGCTCAGCAACAAGAGCT+AGG 0.486371 5:+18365828 None:intergenic
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5:-18365896 MsG0580025425.01.T01:CDS
AATTGTGCACCCCAAGTGTA+AGG 0.491201 5:-18363296 MsG0580025425.01.T01:CDS
TTGCATCTGCATAGCAGGAC+CGG 0.495069 5:+18363829 None:intergenic
ATATATTCCACATCCTCTAT+GGG 0.496055 5:-18365965 MsG0580025425.01.T01:CDS
TTGTCTTGATTGTTTCCACC+AGG 0.496117 5:+18363112 None:intergenic
TCTCGGTTGTTTCTTTAGGA+AGG 0.502575 5:-18364704 MsG0580025425.01.T01:CDS
TTTATAGATGCAATGAGAAA+GGG 0.503030 5:-18364064 MsG0580025425.01.T01:CDS
ATCATGTATGAGTTCGAAAA+CGG 0.503307 5:+18363964 None:intergenic
GGCGGTGGAGGATTATCTTA+GGG 0.508309 5:-18362409 MsG0580025425.01.T01:CDS
TGGCAATTCCATGTTGCACT+TGG 0.511014 5:-18363891 MsG0580025425.01.T01:CDS
CAGCTTTCACCAGCTCCTTG+TGG 0.512750 5:+18363224 None:intergenic
TTGTGAAGCAGTAGAATGAC+AGG 0.514230 5:-18366680 None:intergenic
TCTGATCTTGATCGTAGATC+CGG 0.515841 5:-18363848 MsG0580025425.01.T01:CDS
GATCTCGAATCAAAAGTGAT+TGG 0.519938 5:+18360322 None:intergenic
CGCACCAATTTCAGGAATAG+AGG 0.521001 5:+18366541 None:intergenic
TCTTCAGTGCATCGGAGATG+AGG 0.521451 5:-18360380 MsG0580025425.01.T01:CDS
CTTTAGGAAGGTTATGTGGA+CGG 0.525505 5:-18364692 MsG0580025425.01.T01:CDS
TGCAAACTCGTTTATTAAGA+GGG 0.527286 5:-18365999 MsG0580025425.01.T01:CDS
GCTGGAAGAGTTTGAAGTTG+TGG 0.527412 5:-18362286 MsG0580025425.01.T01:CDS
CTTCAGTGCATCGGAGATGA+GGG 0.528891 5:-18360379 MsG0580025425.01.T01:CDS
TGATGTTAGAAAGGCGGTGG+AGG 0.532130 5:-18362421 MsG0580025425.01.T01:intron
TGTGATGTCGTGCAAGAACA+AGG 0.535047 5:+18363081 None:intergenic
TACAGAAAGCCACAAGGAGC+TGG 0.538877 5:-18363233 MsG0580025425.01.T01:CDS
AAGTTGGGAGCGTCTTAAGT+TGG 0.539410 5:-18362370 MsG0580025425.01.T01:CDS
GGTCCTCCCCATAGAGGATG+TGG 0.539677 5:+18365958 None:intergenic
GCGTCTTAAGTTGGATGGTG+TGG 0.540858 5:-18362361 MsG0580025425.01.T01:CDS
AAGAGAAATTCTATGGTTCA+AGG 0.541072 5:-18363807 MsG0580025425.01.T01:intron
TCGTAGTTGTCTTTGGTCAG+TGG 0.542773 5:+18366623 None:intergenic
AGTGCGAAAAGTAACCTTAG+TGG 0.548121 5:+18362941 None:intergenic
ATGTTGCAAGCAGCAAAGCA+TGG 0.548691 5:-18364097 MsG0580025425.01.T01:CDS
AAATGATGTTAGAAAGGCGG+TGG 0.558219 5:-18362424 MsG0580025425.01.T01:intron
TCTTGTTAGAAACTATCTTG+TGG 0.559832 5:-18366588 MsG0580025425.01.T01:CDS
TGGGAGCGTCTTAAGTTGGA+TGG 0.562598 5:-18362366 MsG0580025425.01.T01:CDS
AGAAACCACAGAGAAGAAAA+GGG 0.563826 5:+18362913 None:intergenic
ACCTTGCTCAATATCTGGAT+CGG 0.564323 5:+18366355 None:intergenic
TGTTGCAAGCAGCAAAGCAT+GGG 0.564523 5:-18364096 MsG0580025425.01.T01:CDS
GCTTTAATTTGCAGGTGTGG+TGG 0.564757 5:-18366083 MsG0580025425.01.T01:intron
ACTTGAAAATCTCAAGGAAG+AGG 0.567742 5:+18362771 None:intergenic
TAAGGAATCAGAACTTAGAG+AGG 0.568613 5:-18364137 MsG0580025425.01.T01:CDS
GTTTCTTTAGGAAGGTTATG+TGG 0.570625 5:-18364696 MsG0580025425.01.T01:CDS
ATCTTGTGGGAAATGGTCTG+TGG 0.570834 5:-18366574 MsG0580025425.01.T01:CDS
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5:-18365895 MsG0580025425.01.T01:CDS
AAATGGGCAAAAGATACAGC+TGG 0.580445 5:-18363196 MsG0580025425.01.T01:CDS
TTATCTATGAAGACCAATGA+TGG 0.582929 5:-18365737 MsG0580025425.01.T01:CDS
TAAGAAAATATCACGGTCAG+AGG 0.584733 5:-18365765 MsG0580025425.01.T01:CDS
TGGTGTCGTCTTCAGTGCAT+CGG 0.588833 5:-18360388 MsG0580025425.01.T01:CDS
TTATCTTAGGGAACATGTGT+CGG 0.589332 5:-18362397 MsG0580025425.01.T01:CDS
TGCGGTAGTTGCTGGGCACG+AGG 0.589759 5:-18365924 MsG0580025425.01.T01:CDS
CTGTAGACTTGAAAATCTCA+AGG 0.594097 5:+18362765 None:intergenic
AAGCTCAGCAACAAGAGCTA+GGG 0.594251 5:+18365829 None:intergenic
GCAGCTTTCACTGTCCCTGG+TGG 0.601445 5:-18363127 MsG0580025425.01.T01:CDS
TTAGGATTCCAATGAAGAGA+AGG 0.602778 5:+18363002 None:intergenic
GGAACAAGCATTGCAGCGAG+TGG 0.605832 5:-18366659 MsG0580025425.01.T01:CDS
AGGAAGAGGCGCAATTGTGA+CGG 0.607133 5:+18362785 None:intergenic
AGTATATTGAGAGCGGTGAG+TGG 0.609550 5:-18366027 MsG0580025425.01.T01:CDS
TAGAACGATAACAGGAACAC+TGG 0.611619 5:+18362811 None:intergenic
AACTACCGCAACGTGAAGAA+CGG 0.612033 5:+18365937 None:intergenic
AATTGCCAAATGCGTCTACA+CGG 0.612652 5:+18363906 None:intergenic
GCCGATCCAGATATTGAGCA+AGG 0.614842 5:-18366356 MsG0580025425.01.T01:intron
TGCAACTGTAAATGGACGGA+AGG 0.618113 5:-18363942 MsG0580025425.01.T01:CDS
AAGAACGGTCCTCCCCATAG+AGG 0.622685 5:+18365952 None:intergenic
AATTGTGAAGAAATTGGTGA+AGG 0.625256 5:-18365900 MsG0580025425.01.T01:CDS
CTTTCTGTAAATAGCTCACG+AGG 0.625312 5:+18363247 None:intergenic
ATATCCTGCCAAGTGCAACA+TGG 0.627952 5:+18363883 None:intergenic
GGTGGAAACAATCAAGACAA+TGG 0.629811 5:-18363109 MsG0580025425.01.T01:CDS
CCCAAATGATGTTAGAAAGG+CGG 0.635377 5:-18362427 MsG0580025425.01.T01:intron
ATGATGCAACTGTAAATGGA+CGG 0.638038 5:-18363946 MsG0580025425.01.T01:CDS
CATATCATTCAACTAACATG+TGG 0.643061 5:-18366467 MsG0580025425.01.T01:CDS
CTTGTGGGAAATGGTCTGTG+GGG 0.644321 5:-18366572 MsG0580025425.01.T01:CDS
ATATGCGAATGGTGATTCTG+AGG 0.644967 5:-18364738 MsG0580025425.01.T01:CDS
CAAGGAGCTGGTGAAAGCTG+GGG 0.651622 5:-18363221 MsG0580025425.01.T01:CDS
TGTCTTGATTGTTTCCACCA+GGG 0.652150 5:+18363113 None:intergenic
GAGGACCGTTCTTCACGTTG+CGG 0.655029 5:-18365942 MsG0580025425.01.T01:CDS
GTGATGTCGTGCAAGAACAA+GGG 0.659099 5:+18363082 None:intergenic
ATTCCACATCCTCTATGGGG+AGG 0.660094 5:-18365961 MsG0580025425.01.T01:CDS
TAGCAGCAGCAAGAAGAACA+GGG 0.665135 5:+18365708 None:intergenic
TTGGAACAGGAAGAATGGGA+AGG 0.668429 5:-18366495 MsG0580025425.01.T01:CDS
TATTTCAAGAGCTACACGGT+AGG 0.669157 5:+18364192 None:intergenic
GTGAAAATGAAAGACAATCG+AGG 0.669964 5:-18365860 MsG0580025425.01.T01:CDS
TTCAGTGCATCGGAGATGAG+GGG 0.671008 5:-18360378 MsG0580025425.01.T01:CDS
TGGTATATAAGAAAATATCA+CGG 0.677081 5:-18365772 MsG0580025425.01.T01:CDS
CTACGATCAAGATCAGAGGA+AGG 0.678354 5:+18363854 None:intergenic
GGATCTACGATCAAGATCAG+AGG 0.680818 5:+18363850 None:intergenic
TCAATATTTCAAGAGCTACA+CGG 0.684421 5:+18364188 None:intergenic
GCTATTTACAGAAAGCCACA+AGG 0.686658 5:-18363239 MsG0580025425.01.T01:CDS
TATATTCCACATCCTCTATG+GGG 0.688060 5:-18365964 MsG0580025425.01.T01:CDS
ATGCACAAGTATATTGAGAG+CGG 0.693461 5:-18366034 MsG0580025425.01.T01:CDS
ACTCCAAAACCAAATCAGCA+AGG 0.700322 5:+18360353 None:intergenic
GTTGTGGTGAAAGAGAGTGA+CGG 0.767465 5:-18362270 MsG0580025425.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATAAAAAAAAATTA+CGG - Chr5:18365802-18365821 MsG0580025425.01.T01:CDS 0.0%
!! ACTTTATAAAAGAAATTTAA+AGG - Chr5:18361580-18361599 MsG0580025425.01.T01:intron 10.0%
!! ATTAAACAATATTTATCTTT+AGG + Chr5:18361546-18361565 None:intergenic 10.0%
!! CTTAAATACTTATAATATTA+GGG - Chr5:18360803-18360822 MsG0580025425.01.T01:intron 10.0%
!! TCTTAAATACTTATAATATT+AGG - Chr5:18360802-18360821 MsG0580025425.01.T01:intron 10.0%
!!! ACAAAACATTTATTATTTTT+GGG - Chr5:18364400-18364419 MsG0580025425.01.T01:intron 10.0%
!!! ATTTTATACTTATACTTTAA+TGG + Chr5:18364821-18364840 None:intergenic 10.0%
!! AAAAATGAAGTATATATGAA+TGG - Chr5:18366013-18366032 MsG0580025425.01.T01:CDS 15.0%
!! AAACTCCTTTAATATATTAT+TGG + Chr5:18361721-18361740 None:intergenic 15.0%
!! ATTTAAAGGTGATTTATAAA+AGG - Chr5:18361594-18361613 MsG0580025425.01.T01:intron 15.0%
!! TAATTAATTAATCACAAAGA+GGG + Chr5:18362695-18362714 None:intergenic 15.0%
!! TACTTCCAATAATATATTAA+AGG - Chr5:18361713-18361732 MsG0580025425.01.T01:intron 15.0%
!! TTAATTAATTAATCACAAAG+AGG + Chr5:18362696-18362715 None:intergenic 15.0%
!! TTTAAAGGTGATTTATAAAA+GGG - Chr5:18361595-18361614 MsG0580025425.01.T01:intron 15.0%
!!! AAAAACTAAATTTGAAATTC+TGG - Chr5:18363453-18363472 MsG0580025425.01.T01:intron 15.0%
!!! ATTTCAATATTTTCTATGTA+TGG + Chr5:18365385-18365404 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTGGTACA+AGG + Chr5:18365352-18365371 None:intergenic 15.0%
!!! CAAAAGTTTGTATTTTATAA+AGG + Chr5:18361637-18361656 None:intergenic 15.0%
!!! CACAAAACATTTATTATTTT+TGG - Chr5:18364399-18364418 MsG0580025425.01.T01:intron 15.0%
!!! TTTTTTAATAAGCAAAATCA+AGG - Chr5:18365532-18365551 MsG0580025425.01.T01:intron 15.0%
!! AAAAAAAAAAAATGCACAGA+AGG + Chr5:18365619-18365638 None:intergenic 20.0%
!! AAACTATGTCTAATATGTAT+AGG + Chr5:18360705-18360724 None:intergenic 20.0%
!! AACTATGTCTAATATGTATA+GGG + Chr5:18360704-18360723 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + Chr5:18361410-18361429 None:intergenic 20.0%
!! AATTAATTAATCACAAAGAG+GGG + Chr5:18362694-18362713 None:intergenic 20.0%
!! ATACATGACATTTAAATAAG+TGG - Chr5:18363516-18363535 MsG0580025425.01.T01:intron 20.0%
!! ATCAATATCAGAAAAGAAAA+AGG + Chr5:18366444-18366463 None:intergenic 20.0%
!! ATGAATAAGATAATAATGTG+TGG + Chr5:18363574-18363593 None:intergenic 20.0%
!! ATTAACCAACAAATAACTTA+AGG - Chr5:18361441-18361460 MsG0580025425.01.T01:intron 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - Chr5:18361411-18361430 MsG0580025425.01.T01:intron 20.0%
!! CAATTAGTAAGGAAAATAAA+TGG - Chr5:18360828-18360847 MsG0580025425.01.T01:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - Chr5:18361383-18361402 MsG0580025425.01.T01:intron 20.0%
!! GATAAGTAATAAGTTTCAAT+TGG + Chr5:18364238-18364257 None:intergenic 20.0%
!! TACACATTAATCTATTCTTT+GGG - Chr5:18360662-18360681 MsG0580025425.01.T01:intron 20.0%
!! TAGTTTCTAAATGTATTGAA+AGG - Chr5:18360719-18360738 MsG0580025425.01.T01:intron 20.0%
!! TGGTATATAAGAAAATATCA+CGG - Chr5:18361199-18361218 MsG0580025425.01.T01:intron 20.0%
!! TTAACCAACAAATAACTTAA+GGG - Chr5:18361442-18361461 MsG0580025425.01.T01:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - Chr5:18361412-18361431 MsG0580025425.01.T01:intron 20.0%
!! TTTAGGCTTAATTAATGATT+TGG + Chr5:18361529-18361548 None:intergenic 20.0%
!!! AGTTATTTGTTGGTTAATTT+TGG + Chr5:18361439-18361458 None:intergenic 20.0%
!!! CATTTATTTTCCTTACTAAT+TGG + Chr5:18360830-18360849 None:intergenic 20.0%
!!! TCAAATTTAGTTTTTGAAGT+TGG + Chr5:18363448-18363467 None:intergenic 20.0%
!!! TTGTTAATCCTTGTTTAAAT+CGG - Chr5:18362617-18362636 MsG0580025425.01.T01:intron 20.0%
!!! TTTTACGCATTTTTTTTTTC+AGG - Chr5:18362527-18362546 MsG0580025425.01.T01:intron 20.0%
! AATGAATACTATATGTGTAG+TGG + Chr5:18361683-18361702 None:intergenic 25.0%
! AATGTCATGTATCTCAAAAT+TGG + Chr5:18363508-18363527 None:intergenic 25.0%
! ACAAAATAATTAAGTGAGTG+GGG + Chr5:18365280-18365299 None:intergenic 25.0%
! ACACAAAATAATTAAGTGAG+TGG + Chr5:18365282-18365301 None:intergenic 25.0%
! AGAAGAAAATGAACGTTTAA+TGG - Chr5:18364652-18364671 MsG0580025425.01.T01:intron 25.0%
! ATAATTCAAAGATAAGAGAG+AGG - Chr5:18365120-18365139 MsG0580025425.01.T01:intron 25.0%
! CACAAAATAATTAAGTGAGT+GGG + Chr5:18365281-18365300 None:intergenic 25.0%
! CCTTTATGTTATTAGAGTTA+GGG + Chr5:18361323-18361342 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - Chr5:18361382-18361401 MsG0580025425.01.T01:intron 25.0%
! GAATGATTGTACTTACAATA+AGG + Chr5:18362669-18362688 None:intergenic 25.0%
! GAGTAAATAATGAATGAGAT+TGG - Chr5:18361945-18361964 MsG0580025425.01.T01:intron 25.0%
! GCCATTGATAAAAATAAAAG+AGG - Chr5:18362949-18362968 MsG0580025425.01.T01:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG - Chr5:18361502-18361521 MsG0580025425.01.T01:intron 25.0%
! GTACACATTAATCTATTCTT+TGG - Chr5:18360661-18360680 MsG0580025425.01.T01:intron 25.0%
! TAAAAAACTGTGACATTTGT+CGG - Chr5:18364976-18364995 MsG0580025425.01.T01:intron 25.0%
! TAATTCAAAGATAAGAGAGA+GGG - Chr5:18365121-18365140 MsG0580025425.01.T01:intron 25.0%
! TATATATGAATGGTTGTACA+CGG - Chr5:18366023-18366042 MsG0580025425.01.T01:CDS 25.0%
! TCCTTTATGTTATTAGAGTT+AGG + Chr5:18361324-18361343 None:intergenic 25.0%
! TCTCTCTTATCTTTGAATTA+TGG + Chr5:18365121-18365140 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - Chr5:18361501-18361520 MsG0580025425.01.T01:intron 25.0%
! TTTATAGATGCAATGAGAAA+GGG - Chr5:18362907-18362926 MsG0580025425.01.T01:CDS 25.0%
!! ATATGGAGTTTGATGTTTTA+AGG - Chr5:18366266-18366285 MsG0580025425.01.T01:intron 25.0%
!! CAAATAAACATTTTCTGAGT+TGG - Chr5:18364514-18364533 MsG0580025425.01.T01:intron 25.0%
!! CATATTGTGAAATTTTGTGT+AGG - Chr5:18363642-18363661 MsG0580025425.01.T01:intron 25.0%
!! TAATAAATGTTTTGTGCACA+TGG + Chr5:18364395-18364414 None:intergenic 25.0%
!! TATATTTTCCTTATTCCTGA+TGG + Chr5:18362745-18362764 None:intergenic 25.0%
!!! CTAATATACCGATTTAAACA+AGG + Chr5:18362628-18362647 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + Chr5:18361379-18361398 None:intergenic 25.0%
!!! GCCTCTTTTATTTTTATCAA+TGG + Chr5:18362953-18362972 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + Chr5:18361498-18361517 None:intergenic 25.0%
!!! TATGGAGTTTGATGTTTTAA+GGG - Chr5:18366267-18366286 MsG0580025425.01.T01:intron 25.0%
!!! TGTCACAGTTTTTTATTCAA+TGG + Chr5:18364971-18364990 None:intergenic 25.0%
AAAAAAAAATGCACAGAAGG+TGG + Chr5:18365616-18365635 None:intergenic 30.0%
AAACTCTTCCAGCAAAAAAT+GGG + Chr5:18364678-18364697 None:intergenic 30.0%
AAAGAAGCCTGGAATAAATT+GGG - Chr5:18360567-18360586 MsG0580025425.01.T01:intron 30.0%
AAGAGAAATTCTATGGTTCA+AGG - Chr5:18363164-18363183 MsG0580025425.01.T01:CDS 30.0%
AAGTTAAAACCATTCAGTCT+TGG + Chr5:18364737-18364756 None:intergenic 30.0%
AATAAAAGTCCAAGACTGAA+TGG - Chr5:18364725-18364744 MsG0580025425.01.T01:CDS 30.0%
AATATATTCCACATCCTCTA+TGG - Chr5:18361005-18361024 MsG0580025425.01.T01:intron 30.0%
AATTGTATCCATCAGGAATA+AGG - Chr5:18362734-18362753 MsG0580025425.01.T01:intron 30.0%
AATTGTGAAGAAATTGGTGA+AGG - Chr5:18361071-18361090 MsG0580025425.01.T01:intron 30.0%
AGACCAACTTTACAAAATTG+AGG - Chr5:18361877-18361896 MsG0580025425.01.T01:intron 30.0%
AGATGCAAAGAGAAATTCTA+TGG - Chr5:18363157-18363176 MsG0580025425.01.T01:CDS 30.0%
AGTAGTGATAACTCAAAACA+TGG + Chr5:18366068-18366087 None:intergenic 30.0%
ATACATGATGCAACTGTAAA+TGG - Chr5:18363021-18363040 MsG0580025425.01.T01:CDS 30.0%
ATAGAAAACTTACCCTTTAC+TGG + Chr5:18362320-18362339 None:intergenic 30.0%
ATATATTCCACATCCTCTAT+GGG - Chr5:18361006-18361025 MsG0580025425.01.T01:intron 30.0%
ATATTAGGGTCCAATTAGTA+AGG - Chr5:18360817-18360836 MsG0580025425.01.T01:intron 30.0%
ATCAACACACATGTATAACA+GGG + Chr5:18362495-18362514 None:intergenic 30.0%
ATCATGTATGAGTTCGAAAA+CGG + Chr5:18363010-18363029 None:intergenic 30.0%
ATCCAGTAATTTCAATCGAT+CGG + Chr5:18365843-18365862 None:intergenic 30.0%
ATCTAGAAAACAAGTCTGAA+AGG + Chr5:18366493-18366512 None:intergenic 30.0%
ATGCAAACTCGTTTATTAAG+AGG - Chr5:18360971-18360990 MsG0580025425.01.T01:intron 30.0%
CAAAATAATTAAGTGAGTGG+GGG + Chr5:18365279-18365298 None:intergenic 30.0%
CATATCATTCAACTAACATG+TGG - Chr5:18360504-18360523 MsG0580025425.01.T01:intron 30.0%
CCAAAGAATTCAAGAGTTTA+AGG - Chr5:18362816-18362835 MsG0580025425.01.T01:CDS 30.0%
CCCTAACTCTAATAACATAA+AGG - Chr5:18361320-18361339 MsG0580025425.01.T01:intron 30.0%
CCTTAAACTCTTGAATTCTT+TGG + Chr5:18362819-18362838 None:intergenic 30.0%
CTAAGACTGAATATGAGATT+TGG - Chr5:18360457-18360476 MsG0580025425.01.T01:intron 30.0%
CTAATATGAGTAAGATTCTC+TGG + Chr5:18360531-18360550 None:intergenic 30.0%
CTGAGGATTATTAATCTTCT+CGG - Chr5:18362250-18362269 MsG0580025425.01.T01:intron 30.0%
CTTATCACATAGATCAATCT+TGG - Chr5:18366086-18366105 MsG0580025425.01.T01:intron 30.0%
CTTGTTAGAAACTATCTTGT+GGG - Chr5:18360384-18360403 MsG0580025425.01.T01:CDS 30.0%
GAAATTACTGGATTCATCAT+TGG - Chr5:18365850-18365869 MsG0580025425.01.T01:CDS 30.0%
GGAGATGTTAAATTAAGTGT+TGG + Chr5:18361662-18361681 None:intergenic 30.0%
GGTAATCTCAAAACTAAAAG+CGG + Chr5:18362054-18362073 None:intergenic 30.0%
GTTCAATAACAATACTTCCA+TGG + Chr5:18364362-18364381 None:intergenic 30.0%
GTTTATAGATGCAATGAGAA+AGG - Chr5:18362906-18362925 MsG0580025425.01.T01:CDS 30.0%
TAAAGAAGCCTGGAATAAAT+TGG - Chr5:18360566-18360585 MsG0580025425.01.T01:intron 30.0%
TACATGATCTGTTTGGAAAT+TGG - Chr5:18361761-18361780 MsG0580025425.01.T01:intron 30.0%
TATAAAAGGGAAATGCTAAC+TGG - Chr5:18361608-18361627 MsG0580025425.01.T01:intron 30.0%
TATATACCTTGCTCAATATC+TGG + Chr5:18360624-18360643 None:intergenic 30.0%
TATCAACACACATGTATAAC+AGG + Chr5:18362496-18362515 None:intergenic 30.0%
TATCAGAAAAGAAAAAGGCT+CGG + Chr5:18366439-18366458 None:intergenic 30.0%
TCAATATTTCAAGAGCTACA+CGG + Chr5:18362786-18362805 None:intergenic 30.0%
TCTTGTTAGAAACTATCTTG+TGG - Chr5:18360383-18360402 MsG0580025425.01.T01:CDS 30.0%
TGATCTATGCATAGTACATT+GGG - Chr5:18365241-18365260 MsG0580025425.01.T01:intron 30.0%
TGCAAACTCGTTTATTAAGA+GGG - Chr5:18360972-18360991 MsG0580025425.01.T01:intron 30.0%
TTATCTATGAAGACCAATGA+TGG - Chr5:18361234-18361253 MsG0580025425.01.T01:intron 30.0%
TTGAATTTATCGCCAGTAAA+GGG - Chr5:18362305-18362324 MsG0580025425.01.T01:CDS 30.0%
TTTCACAATATGTTATAGCG+CGG + Chr5:18363634-18363653 None:intergenic 30.0%
TTTGGGTAACTTCTATGTTT+GGG - Chr5:18366387-18366406 MsG0580025425.01.T01:CDS 30.0%
! AAGCAAAATCAAGGAGTTTT+TGG - Chr5:18365541-18365560 MsG0580025425.01.T01:intron 30.0%
! ACTCCTCAATTTTGTAAAGT+TGG + Chr5:18361883-18361902 None:intergenic 30.0%
! AGAGTTTTACATGATCTGTT+TGG - Chr5:18361754-18361773 MsG0580025425.01.T01:intron 30.0%
! AGTGAAGTTTGATGAGTTTT+TGG + Chr5:18361834-18361853 None:intergenic 30.0%
! GTTTTTCTACAATATGCGAA+TGG - Chr5:18362222-18362241 MsG0580025425.01.T01:intron 30.0%
! TCACATGTCATTTCAGAATT+CGG - Chr5:18362568-18362587 MsG0580025425.01.T01:intron 30.0%
! TCTTTTCACTTCTTCAACTT+CGG - Chr5:18363945-18363964 MsG0580025425.01.T01:CDS 30.0%
! TTATTCCTGATGGATACAAT+TGG + Chr5:18362735-18362754 None:intergenic 30.0%
! TTTAAGTGTCTTTTGTGAGT+GGG - Chr5:18360753-18360772 MsG0580025425.01.T01:intron 30.0%
!! AAGCTCTAGAAAGAAGAATT+AGG + Chr5:18362183-18362202 None:intergenic 30.0%
!! AATCACTTTTGATTCGAGAT+CGG - Chr5:18366651-18366670 MsG0580025425.01.T01:CDS 30.0%
!! ACATACATGCTTTAATTTGC+AGG - Chr5:18360880-18360899 MsG0580025425.01.T01:intron 30.0%
!! AGAGAAGTGCATGAATTTTA+CGG - Chr5:18362078-18362097 MsG0580025425.01.T01:intron 30.0%
!! GAGTATCGTTCCAATTTTAT+CGG - Chr5:18361899-18361918 MsG0580025425.01.T01:intron 30.0%
!! TGTGCATCGATTTATATTGA+AGG + Chr5:18360924-18360943 None:intergenic 30.0%
!! TTTTAAGTGTCTTTTGTGAG+TGG - Chr5:18360752-18360771 MsG0580025425.01.T01:intron 30.0%
!! TTTTGGGTAACTTCTATGTT+TGG - Chr5:18366386-18366405 MsG0580025425.01.T01:CDS 30.0%
!!! ATGTTTTAAGGGCGTTTTTT+GGG - Chr5:18366278-18366297 MsG0580025425.01.T01:intron 30.0%
!!! ATTACCACTGATGTTGTTTT+TGG + Chr5:18364788-18364807 None:intergenic 30.0%
!!! ATTTTTTGCTTCCTTACACT+TGG + Chr5:18363689-18363708 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + Chr5:18361390-18361409 None:intergenic 30.0%
!!! TTACCACTGATGTTGTTTTT+GGG + Chr5:18364787-18364806 None:intergenic 30.0%
!!! TTTGTGTTGTTTTTCCTCTT+TGG + Chr5:18362130-18362149 None:intergenic 30.0%
!!! TTTTTTGCTTCCTTACACTT+GGG + Chr5:18363688-18363707 None:intergenic 30.0%
AAAGATCACAGATCACAACA+AGG + Chr5:18362398-18362417 None:intergenic 35.0%
AAGATCACAGATCACAACAA+GGG + Chr5:18362397-18362416 None:intergenic 35.0%
AAGCCCAAATGATGTTAGAA+AGG - Chr5:18364541-18364560 MsG0580025425.01.T01:intron 35.0%
AATAACATAAAGGACCAGAG+TGG - Chr5:18361330-18361349 MsG0580025425.01.T01:intron 35.0%
AATTCATGCACTTCTCTTTC+AGG + Chr5:18362075-18362094 None:intergenic 35.0%
ACTTGAAAATCTCAAGGAAG+AGG + Chr5:18364203-18364222 None:intergenic 35.0%
AGAAACCACAGAGAAGAAAA+GGG + Chr5:18364061-18364080 None:intergenic 35.0%
AGAAACTATCTTGTGGGAAA+TGG - Chr5:18360390-18360409 MsG0580025425.01.T01:CDS 35.0%
ATCTATGCATAGTACATTGG+GGG - Chr5:18365243-18365262 MsG0580025425.01.T01:intron 35.0%
ATGATGCAACTGTAAATGGA+CGG - Chr5:18363025-18363044 MsG0580025425.01.T01:CDS 35.0%
ATGCACAAGTATATTGAGAG+CGG - Chr5:18360937-18360956 MsG0580025425.01.T01:intron 35.0%
CAAACTCTTCCAGCAAAAAA+TGG + Chr5:18364679-18364698 None:intergenic 35.0%
CGAGGAAATTGTGAAGAAAT+TGG - Chr5:18361065-18361084 MsG0580025425.01.T01:intron 35.0%
CTGATCTATGCATAGTACAT+TGG - Chr5:18365240-18365259 MsG0580025425.01.T01:intron 35.0%
CTGTAGACTTGAAAATCTCA+AGG + Chr5:18364209-18364228 None:intergenic 35.0%
GAGAAGAGATTAGAGAGTTT+AGG - Chr5:18363304-18363323 MsG0580025425.01.T01:CDS 35.0%
GATCTATGCATAGTACATTG+GGG - Chr5:18365242-18365261 MsG0580025425.01.T01:intron 35.0%
GATCTCGAAGCAAAAGTAAT+CGG + Chr5:18366525-18366544 None:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+TGG + Chr5:18366652-18366671 None:intergenic 35.0%
GCTTATATGTTGGAACAAAG+AGG - Chr5:18363243-18363262 MsG0580025425.01.T01:CDS 35.0%
GTGAAAATGAAAGACAATCG+AGG - Chr5:18361111-18361130 MsG0580025425.01.T01:intron 35.0%
GTTGAATTTATCGCCAGTAA+AGG - Chr5:18362304-18362323 MsG0580025425.01.T01:CDS 35.0%
TAAGAAAATATCACGGTCAG+AGG - Chr5:18361206-18361225 MsG0580025425.01.T01:intron 35.0%
TAAGGAATCAGAACTTAGAG+AGG - Chr5:18362834-18362853 MsG0580025425.01.T01:CDS 35.0%
TAATTAATCACAAAGAGGGG+AGG + Chr5:18362691-18362710 None:intergenic 35.0%
TAGAAACCACAGAGAAGAAA+AGG + Chr5:18364062-18364081 None:intergenic 35.0%
TATAGCGAAGTGTATGACTA+TGG - Chr5:18361179-18361198 MsG0580025425.01.T01:intron 35.0%
TATAGCGCGGTTAAAATTCA+TGG + Chr5:18363621-18363640 None:intergenic 35.0%
TATATTCCACATCCTCTATG+GGG - Chr5:18361007-18361026 MsG0580025425.01.T01:intron 35.0%
TCACATAGATCAATCTTGGT+AGG - Chr5:18366090-18366109 MsG0580025425.01.T01:intron 35.0%
TCCAGTAATTTCAATCGATC+GGG + Chr5:18365842-18365861 None:intergenic 35.0%
TCGGTACTATTAAAGTTCTC+TGG - Chr5:18362587-18362606 MsG0580025425.01.T01:intron 35.0%
TCTTGCAAATATTGCCAAAG+AGG - Chr5:18362113-18362132 MsG0580025425.01.T01:intron 35.0%
TGAAGAAATTGGTGAAGGAA+GGG - Chr5:18361076-18361095 MsG0580025425.01.T01:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + Chr5:18361449-18361468 None:intergenic 35.0%
TTACCCAAAAACAACATCAG+TGG - Chr5:18364781-18364800 MsG0580025425.01.T01:intron 35.0%
TTAGGATTCCAATGAAGAGA+AGG + Chr5:18363972-18363991 None:intergenic 35.0%
TTATCTTAGGGAACATGTGT+CGG - Chr5:18364574-18364593 MsG0580025425.01.T01:intron 35.0%
TTCATATTGCTAAAGAAGCC+TGG - Chr5:18360556-18360575 MsG0580025425.01.T01:intron 35.0%
TTGCAGAAAGAGATCAATCT+AGG - Chr5:18365014-18365033 MsG0580025425.01.T01:intron 35.0%
! AATTTGCTTCCCTAGCTAAT+AGG + Chr5:18364491-18364510 None:intergenic 35.0%
! AGATTTGGAACAGGAAGAAT+GGG - Chr5:18360472-18360491 MsG0580025425.01.T01:intron 35.0%
! CAAAAATGGACTCAAAACAG+AGG + Chr5:18366345-18366364 None:intergenic 35.0%
! CTGAATATGAGATTTGGAAC+AGG - Chr5:18360463-18360482 MsG0580025425.01.T01:intron 35.0%
! GCTTTATTAGCATTCATCCA+TGG - Chr5:18364342-18364361 MsG0580025425.01.T01:intron 35.0%
! GTTTCTTTAGGAAGGTTATG+TGG - Chr5:18362275-18362294 MsG0580025425.01.T01:CDS 35.0%
! TTTTATCAATGGCCCATAAG+AGG + Chr5:18362942-18362961 None:intergenic 35.0%
! TTTTTGCTTCCTTACACTTG+GGG + Chr5:18363687-18363706 None:intergenic 35.0%
!! ACTTGTTTTCTAGATTCTGG+TGG - Chr5:18366498-18366517 MsG0580025425.01.T01:CDS 35.0%
!! ATCTTCTCGGTTGTTTCTTT+AGG - Chr5:18362263-18362282 MsG0580025425.01.T01:intron 35.0%
!! ATTACTTTTGCTTCGAGATC+GGG - Chr5:18366525-18366544 MsG0580025425.01.T01:CDS 35.0%
!! CAGACTTGTTTTCTAGATTC+TGG - Chr5:18366495-18366514 MsG0580025425.01.T01:CDS 35.0%
!! CATTGGTCTTCATAGATAAC+AGG + Chr5:18361233-18361252 None:intergenic 35.0%
!! CTTGTTTTCTAGATTCTGGT+GGG - Chr5:18366499-18366518 MsG0580025425.01.T01:CDS 35.0%
!! GAGAAGTGCATGAATTTTAC+GGG - Chr5:18362079-18362098 MsG0580025425.01.T01:intron 35.0%
!! GATTACTTTTGCTTCGAGAT+CGG - Chr5:18366524-18366543 MsG0580025425.01.T01:CDS 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - Chr5:18364102-18364121 MsG0580025425.01.T01:CDS 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - Chr5:18364101-18364120 MsG0580025425.01.T01:CDS 35.0%
!! TTTTTGGATGTGTTTGAGGT+GGG - Chr5:18365557-18365576 MsG0580025425.01.T01:intron 35.0%
!!! CTAGTTGCAAGTTTTTTGAC+TGG - Chr5:18366557-18366576 MsG0580025425.01.T01:CDS 35.0%
!!! GATGTTTTAAGGGCGTTTTT+TGG - Chr5:18366277-18366296 MsG0580025425.01.T01:intron 35.0%
!!! GCAAGTTTTTTGACTGGTTA+TGG - Chr5:18366563-18366582 MsG0580025425.01.T01:CDS 35.0%
!!! TTTAATGGCCCATTTTTTGC+TGG - Chr5:18364667-18364686 MsG0580025425.01.T01:CDS 35.0%
!!! TTTTTTAGATGACATCGTCG+TGG - Chr5:18366160-18366179 MsG0580025425.01.T01:intron 35.0%
AAATGATGTTAGAAAGGCGG+TGG - Chr5:18364547-18364566 MsG0580025425.01.T01:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG - Chr5:18363775-18363794 MsG0580025425.01.T01:intron 40.0%
AACAGGGATTTCACCATCAT+TGG + Chr5:18361250-18361269 None:intergenic 40.0%
AATTGCCAAATGCGTCTACA+CGG + Chr5:18363068-18363087 None:intergenic 40.0%
ACCGCCTTTCTAACATCATT+TGG + Chr5:18364548-18364567 None:intergenic 40.0%
ACCTTAGTGGCAATGACTTA+AGG + Chr5:18364020-18364039 None:intergenic 40.0%
ACCTTGCTCAATATCTGGAT+CGG + Chr5:18360619-18360638 None:intergenic 40.0%
ACTCCAAAACCAAATCAGCA+AGG + Chr5:18366621-18366640 None:intergenic 40.0%
AGATCAATCTTGGTAGGTAG+TGG - Chr5:18366096-18366115 MsG0580025425.01.T01:intron 40.0%
AGATGATGAAACACAGATCG+TGG - Chr5:18365198-18365217 MsG0580025425.01.T01:intron 40.0%
AGGATAGACTCATAGAGAGA+GGG + Chr5:18364863-18364882 None:intergenic 40.0%
AGTGCGAAAAGTAACCTTAG+TGG + Chr5:18364033-18364052 None:intergenic 40.0%
AGTTGCACCCAATTTATTCC+AGG + Chr5:18360577-18360596 None:intergenic 40.0%
ATATGCGAATGGTGATTCTG+AGG - Chr5:18362233-18362252 MsG0580025425.01.T01:intron 40.0%
ATCAGAACTTAGAGAGGCTT+CGG - Chr5:18362840-18362859 MsG0580025425.01.T01:CDS 40.0%
ATGACATCGTCGTGGAATTA+TGG - Chr5:18366168-18366187 MsG0580025425.01.T01:intron 40.0%
CAAAGCTTCTTTCGTAGGTA+TGG - Chr5:18362146-18362165 MsG0580025425.01.T01:intron 40.0%
CAACACAAAGCTTCTTTCGT+AGG - Chr5:18362141-18362160 MsG0580025425.01.T01:intron 40.0%
CATAGCAAGTGAAGCACAAA+AGG + Chr5:18364094-18364113 None:intergenic 40.0%
CATGCATGCAGCTTATATGT+TGG - Chr5:18363233-18363252 MsG0580025425.01.T01:CDS 40.0%
CATGTATGTATGTGAGTGAG+AGG + Chr5:18363217-18363236 None:intergenic 40.0%
CCAAAGACAACTACGAAAAC+TGG - Chr5:18360355-18360374 MsG0580025425.01.T01:CDS 40.0%
CCAGTAATTTCAATCGATCG+GGG + Chr5:18365841-18365860 None:intergenic 40.0%
CCCAAATGATGTTAGAAAGG+CGG - Chr5:18364544-18364563 MsG0580025425.01.T01:intron 40.0%
CCGCCTTTCTAACATCATTT+GGG + Chr5:18364547-18364566 None:intergenic 40.0%
CTGGATTCATCATTGGATGA+TGG - Chr5:18365857-18365876 MsG0580025425.01.T01:CDS 40.0%
CTTCGCTATATTCGTGTTTC+CGG + Chr5:18361169-18361188 None:intergenic 40.0%
CTTTCTGTAAATAGCTCACG+AGG + Chr5:18363727-18363746 None:intergenic 40.0%
GAGTTCATTTGATTCAGCCA+TGG - Chr5:18364459-18364478 MsG0580025425.01.T01:intron 40.0%
GCAAAAAGAGAAGCAAGTGA+GGG - Chr5:18365175-18365194 MsG0580025425.01.T01:intron 40.0%
GCTATTTACAGAAAGCCACA+AGG - Chr5:18363732-18363751 MsG0580025425.01.T01:intron 40.0%
GCTTCAACTTTATGTGGTCT+AGG - Chr5:18366411-18366430 MsG0580025425.01.T01:CDS 40.0%
GCTTTGTATTCACACCCTTA+GGG + Chr5:18362468-18362487 None:intergenic 40.0%
GGTAATTTAGTCGGAGAAGA+AGG - Chr5:18365922-18365941 MsG0580025425.01.T01:CDS 40.0%
GGTGGAAACAATCAAGACAA+TGG - Chr5:18363862-18363881 MsG0580025425.01.T01:CDS 40.0%
GTGAAGAAATTGGTGAAGGA+AGG - Chr5:18361075-18361094 MsG0580025425.01.T01:intron 40.0%
GTGACCTCTATTCCTGAAAT+TGG - Chr5:18360426-18360445 MsG0580025425.01.T01:CDS 40.0%
GTTGGTTGTGAAGTTGCTAT+AGG + Chr5:18363430-18363449 None:intergenic 40.0%
TAGAACGATAACAGGAACAC+TGG + Chr5:18364163-18364182 None:intergenic 40.0%
TATTTCAAGAGCTACACGGT+AGG + Chr5:18362782-18362801 None:intergenic 40.0%
TCCTTAAGTCATTGCCACTA+AGG - Chr5:18364016-18364035 MsG0580025425.01.T01:CDS 40.0%
TCTGATCTTGATCGTAGATC+CGG - Chr5:18363123-18363142 MsG0580025425.01.T01:CDS 40.0%
TCTGGATTACAAGACGTATC+CGG + Chr5:18362445-18362464 None:intergenic 40.0%
TCTTGTAATCCAGACCCTAA+GGG - Chr5:18362451-18362470 MsG0580025425.01.T01:intron 40.0%
TGCACTTGGCAGGATATTTA+GGG - Chr5:18363094-18363113 MsG0580025425.01.T01:CDS 40.0%
TGTCTTGATTGTTTCCACCA+GGG + Chr5:18363861-18363880 None:intergenic 40.0%
TTACTCCTCAATTGTCCCTT+CGG + Chr5:18361931-18361950 None:intergenic 40.0%
TTGCACTTGGCAGGATATTT+AGG - Chr5:18363093-18363112 MsG0580025425.01.T01:CDS 40.0%
TTGGGTGCTTCAACTTTATG+TGG - Chr5:18366405-18366424 MsG0580025425.01.T01:CDS 40.0%
TTGTCTTGATTGTTTCCACC+AGG + Chr5:18363862-18363881 None:intergenic 40.0%
! AAATGTTTTGTGCACATGGC+TGG + Chr5:18364391-18364410 None:intergenic 40.0%
! AAATTTTGTGTAGGCAGTGG+AGG - Chr5:18363651-18363670 MsG0580025425.01.T01:intron 40.0%
! AGCTGGTTCATTTACTCTTG+TGG - Chr5:18363792-18363811 MsG0580025425.01.T01:intron 40.0%
! CCAGTTTTCGTAGTTGTCTT+TGG + Chr5:18360358-18360377 None:intergenic 40.0%
! CGTGTTTGATCTCGTTTTCA+GGG + Chr5:18364948-18364967 None:intergenic 40.0%
! CTTTAGGAAGGTTATGTGGA+CGG - Chr5:18362279-18362298 MsG0580025425.01.T01:CDS 40.0%
! GAGATTTGGAACAGGAAGAA+TGG - Chr5:18360471-18360490 MsG0580025425.01.T01:intron 40.0%
! GTGAAATTTTGTGTAGGCAG+TGG - Chr5:18363648-18363667 MsG0580025425.01.T01:intron 40.0%
! GTTCGAAAACGGCTTTTCTA+CGG + Chr5:18362999-18363018 None:intergenic 40.0%
! TCCTGATGGATACAATTGGA+GGG + Chr5:18362731-18362750 None:intergenic 40.0%
! TTCCTGATGGATACAATTGG+AGG + Chr5:18362732-18362751 None:intergenic 40.0%
! TTGGATGATGGTGTGTGATT+TGG - Chr5:18365869-18365888 MsG0580025425.01.T01:CDS 40.0%
!! AACATGTGTCGGTTGAAAGT+TGG - Chr5:18364585-18364604 MsG0580025425.01.T01:intron 40.0%
!! AAGCGGAAGTAGATTAGTCT+TGG + Chr5:18362037-18362056 None:intergenic 40.0%
!! AAGTCTGAAAGGCATTCGAT+AGG + Chr5:18366482-18366501 None:intergenic 40.0%
!! ACATGTGTCGGTTGAAAGTT+GGG - Chr5:18364586-18364605 MsG0580025425.01.T01:intron 40.0%
!! ATGGTGTGTGATTTGGTATG+TGG - Chr5:18365876-18365895 MsG0580025425.01.T01:CDS 40.0%
!! CATGCTTTAATTTGCAGGTG+TGG - Chr5:18360885-18360904 MsG0580025425.01.T01:intron 40.0%
!! GGAGTTTTTGGATGTGTTTG+AGG - Chr5:18365553-18365572 MsG0580025425.01.T01:intron 40.0%
!! GGTGTAGGTGTTGTTAGATA+TGG - Chr5:18366249-18366268 MsG0580025425.01.T01:intron 40.0%
!! GTTTTTGGATGTGTTTGAGG+TGG - Chr5:18365556-18365575 MsG0580025425.01.T01:intron 40.0%
!! TCTCGGTTGTTTCTTTAGGA+AGG - Chr5:18362267-18362286 MsG0580025425.01.T01:intron 40.0%
!!! ATTTGGTTTTGGAGTTCGGT+GGG - Chr5:18366626-18366645 MsG0580025425.01.T01:CDS 40.0%
!!! GCTGATTTGGTTTTGGAGTT+CGG - Chr5:18366622-18366641 MsG0580025425.01.T01:CDS 40.0%
!!! GTACCTTGCTGATTTGGTTT+TGG - Chr5:18366615-18366634 MsG0580025425.01.T01:CDS 40.0%
!!! TTTTAAGGGCGTTTTTTGGG+TGG - Chr5:18366281-18366300 MsG0580025425.01.T01:intron 40.0%
AAATGCCGTGTAGACGCATT+TGG - Chr5:18363060-18363079 MsG0580025425.01.T01:CDS 45.0%
AACTACCGCAACGTGAAGAA+CGG + Chr5:18361037-18361056 None:intergenic 45.0%
AAGCTCAGCAACAAGAGCTA+GGG + Chr5:18361145-18361164 None:intergenic 45.0%
AATACTCGAGTGACAGAGAG+AGG - Chr5:18365145-18365164 MsG0580025425.01.T01:intron 45.0%
AATTCCATGTTGCACTTGGC+AGG - Chr5:18363084-18363103 MsG0580025425.01.T01:CDS 45.0%
AATTGTGCACCCCAAGTGTA+AGG - Chr5:18363675-18363694 MsG0580025425.01.T01:intron 45.0%
ACACAGATCGTGGAAGATGA+TGG - Chr5:18365208-18365227 MsG0580025425.01.T01:intron 45.0%
ACAGAAACACCACACCAAGA+AGG + Chr5:18366313-18366332 None:intergenic 45.0%
ACGGCAGTGGGTAATTTAGT+CGG - Chr5:18365913-18365932 MsG0580025425.01.T01:CDS 45.0%
ACTTCGGTCCTTCTCTTCAT+TGG - Chr5:18363961-18363980 MsG0580025425.01.T01:CDS 45.0%
AGAACAATGCAGATGGAGGA+TGG - Chr5:18365079-18365098 MsG0580025425.01.T01:intron 45.0%
AGGGTAATCCTGACCTCTTA+TGG - Chr5:18362926-18362945 MsG0580025425.01.T01:CDS 45.0%
AGTATATTGAGAGCGGTGAG+TGG - Chr5:18360944-18360963 MsG0580025425.01.T01:intron 45.0%
ATACTCGAGTGACAGAGAGA+GGG - Chr5:18365146-18365165 MsG0580025425.01.T01:intron 45.0%
ATATCCTGCCAAGTGCAACA+TGG + Chr5:18363091-18363110 None:intergenic 45.0%
ATCTTGTGGGAAATGGTCTG+TGG - Chr5:18360397-18360416 MsG0580025425.01.T01:CDS 45.0%
ATGTTGCAAGCAGCAAAGCA+TGG - Chr5:18362874-18362893 MsG0580025425.01.T01:CDS 45.0%
CACACATGTATAACAGGGAC+TGG + Chr5:18362490-18362509 None:intergenic 45.0%
CCCCGATCGATTGAAATTAC+TGG - Chr5:18365838-18365857 MsG0580025425.01.T01:CDS 45.0%
CGCACCAATTTCAGGAATAG+AGG + Chr5:18360433-18360452 None:intergenic 45.0%
CTACGATCAAGATCAGAGGA+AGG + Chr5:18363120-18363139 None:intergenic 45.0%
GACGGAACTAGAACGATAAC+AGG + Chr5:18364171-18364190 None:intergenic 45.0%
GAGGATAGACTCATAGAGAG+AGG + Chr5:18364864-18364883 None:intergenic 45.0%
GGATAGACTCATAGAGAGAG+GGG + Chr5:18364862-18364881 None:intergenic 45.0%
GGATCTACGATCAAGATCAG+AGG + Chr5:18363124-18363143 None:intergenic 45.0%
GGCAAAAAGAGAAGCAAGTG+AGG - Chr5:18365174-18365193 MsG0580025425.01.T01:intron 45.0%
GGGTAATCCTGACCTCTTAT+GGG - Chr5:18362927-18362946 MsG0580025425.01.T01:CDS 45.0%
GTCTTGTAATCCAGACCCTA+AGG - Chr5:18362450-18362469 MsG0580025425.01.T01:intron 45.0%
GTGATGTCGTGCAAGAACAA+GGG + Chr5:18363892-18363911 None:intergenic 45.0%
GTTCTTCTTGCTGCTGCTAA+GGG - Chr5:18361267-18361286 MsG0580025425.01.T01:intron 45.0%
GTTGTGGTGAAAGAGAGTGA+CGG - Chr5:18364701-18364720 MsG0580025425.01.T01:CDS 45.0%
TAAAGGACCAGAGTGGTTGA+CGG - Chr5:18361337-18361356 MsG0580025425.01.T01:intron 45.0%
TAAATTACCCACTGCCGTTG+TGG + Chr5:18365911-18365930 None:intergenic 45.0%
TAAGCTCAGCAACAAGAGCT+AGG + Chr5:18361146-18361165 None:intergenic 45.0%
TACTCCTCAATTGTCCCTTC+GGG + Chr5:18361930-18361949 None:intergenic 45.0%
TAGCAGCAGCAAGAAGAACA+GGG + Chr5:18361266-18361285 None:intergenic 45.0%
TAGCTAATAGGCTAGCACCA+TGG + Chr5:18364479-18364498 None:intergenic 45.0%
TATGGACTCGGATCTGATGT+CGG - Chr5:18366186-18366205 MsG0580025425.01.T01:intron 45.0%
TCCCTCCAATTGTATCCATC+AGG - Chr5:18362727-18362746 MsG0580025425.01.T01:intron 45.0%
TCGGGGACATCCGATAAAAT+TGG + Chr5:18361912-18361931 None:intergenic 45.0%
TCGTAGTTGTCTTTGGTCAG+TGG + Chr5:18360351-18360370 None:intergenic 45.0%
TCGTCGTGGAATTATGGACT+CGG - Chr5:18366174-18366193 MsG0580025425.01.T01:intron 45.0%
TCTCTTTGCATCTGCATAGC+AGG + Chr5:18363150-18363169 None:intergenic 45.0%
TCTTGTGGGAAATGGTCTGT+GGG - Chr5:18360398-18360417 MsG0580025425.01.T01:CDS 45.0%
TGCAACTGTAAATGGACGGA+AGG - Chr5:18363029-18363048 MsG0580025425.01.T01:CDS 45.0%
TGGCAATTCCATGTTGCACT+TGG - Chr5:18363080-18363099 MsG0580025425.01.T01:CDS 45.0%
TGTGATGTCGTGCAAGAACA+AGG + Chr5:18363893-18363912 None:intergenic 45.0%
TGTTCTTCTTGCTGCTGCTA+AGG - Chr5:18361266-18361285 MsG0580025425.01.T01:intron 45.0%
TGTTGCAAGCAGCAAAGCAT+GGG - Chr5:18362875-18362894 MsG0580025425.01.T01:CDS 45.0%
TTAGAACGCGCACCAATTTC+AGG + Chr5:18360441-18360460 None:intergenic 45.0%
TTAGCAGCAGCAAGAAGAAC+AGG + Chr5:18361267-18361286 None:intergenic 45.0%
TTGACGACGTTGAGGTAGAA+GGG + Chr5:18364904-18364923 None:intergenic 45.0%
TTGGAACAGGAAGAATGGGA+AGG - Chr5:18360476-18360495 MsG0580025425.01.T01:intron 45.0%
TTTCAGCGTAACGAGCTGTT+AGG + Chr5:18363990-18364009 None:intergenic 45.0%
TTTCGATCACTGCCGTTGTA+CGG + Chr5:18365957-18365976 None:intergenic 45.0%
! ATGGTGCTAGCCTATTAGCT+AGG - Chr5:18364478-18364497 MsG0580025425.01.T01:intron 45.0%
! ATTTTATCGGATGTCCCCGA+AGG - Chr5:18361912-18361931 MsG0580025425.01.T01:intron 45.0%
! CATTGCCCTTTTCTTCTCTG+TGG - Chr5:18364053-18364072 MsG0580025425.01.T01:CDS 45.0%
! GATTTGGTATGTGGAAGTCG+TGG - Chr5:18365885-18365904 MsG0580025425.01.T01:CDS 45.0%
! GCGTGTTTGATCTCGTTTTC+AGG + Chr5:18364949-18364968 None:intergenic 45.0%
! GCTGGAAGAGTTTGAAGTTG+TGG - Chr5:18364685-18364704 MsG0580025425.01.T01:CDS 45.0%
! GGCTTTGTATTCACACCCTT+AGG + Chr5:18362469-18362488 None:intergenic 45.0%
! GTGGTTTGTCATGATTGCAG+TGG - Chr5:18366135-18366154 MsG0580025425.01.T01:intron 45.0%
! TCAATCTTGGTAGGTAGTGG+TGG - Chr5:18366099-18366118 MsG0580025425.01.T01:intron 45.0%
! TGGTGCTAGCCTATTAGCTA+GGG - Chr5:18364479-18364498 MsG0580025425.01.T01:intron 45.0%
! TTTTATCGGATGTCCCCGAA+GGG - Chr5:18361913-18361932 MsG0580025425.01.T01:intron 45.0%
!! AAGTTGGGAGCGTCTTAAGT+TGG - Chr5:18364601-18364620 MsG0580025425.01.T01:intron 45.0%
!! CTCGTTTTCAGGGAGTTTGA+AGG + Chr5:18364938-18364957 None:intergenic 45.0%
!! GCTAGCTCTTGTTGCGTTTT+GGG - Chr5:18366370-18366389 MsG0580025425.01.T01:CDS 45.0%
!! GCTTTAATTTGCAGGTGTGG+TGG - Chr5:18360888-18360907 MsG0580025425.01.T01:intron 45.0%
!! TGGACTAGTGCTGATCAAGA+GGG - Chr5:18366218-18366237 MsG0580025425.01.T01:intron 45.0%
!!! GATTTGGTTTTGGAGTTCGG+TGG - Chr5:18366625-18366644 MsG0580025425.01.T01:CDS 45.0%
!!! ATTCTTAATTTTTTTTTTTT+TGG + Chr5:18365359-18365378 None:intergenic 5.0%
AAAGCGGAGGTGAAGTGGAA+GGG - Chr5:18365974-18365993 MsG0580025425.01.T01:CDS 50.0%
AACGCAACAAGAGCTAGCGA+CGG + Chr5:18366368-18366387 None:intergenic 50.0%
ACAACGGCAGTGATCGAAAG+CGG - Chr5:18365958-18365977 MsG0580025425.01.T01:CDS 50.0%
ACAAGGAGCTGGTGAAAGCT+GGG - Chr5:18363749-18363768 MsG0580025425.01.T01:intron 50.0%
ACTCCTCAATTGTCCCTTCG+GGG + Chr5:18361929-18361948 None:intergenic 50.0%
AGAGCTAGCGACGGCAAAAA+TGG + Chr5:18366359-18366378 None:intergenic 50.0%
AGGATGAAGTGGCCGTACAA+CGG - Chr5:18365942-18365961 MsG0580025425.01.T01:CDS 50.0%
AGGCGGTGGAGGATTATCTT+AGG - Chr5:18364561-18364580 MsG0580025425.01.T01:intron 50.0%
AGTGGACGGGTAACTATTGG+TGG - Chr5:18365048-18365067 MsG0580025425.01.T01:intron 50.0%
ATCACAACAAGGGTTCGCAC+AGG + Chr5:18362387-18362406 None:intergenic 50.0%
ATTCCACATCCTCTATGGGG+AGG - Chr5:18361010-18361029 MsG0580025425.01.T01:intron 50.0%
CTTCAGTGCATCGGAGATGA+GGG - Chr5:18366592-18366611 MsG0580025425.01.T01:CDS 50.0%
CTTGACGACGTTGAGGTAGA+AGG + Chr5:18364905-18364924 None:intergenic 50.0%
CTTGTGGGAAATGGTCTGTG+GGG - Chr5:18360399-18360418 MsG0580025425.01.T01:CDS 50.0%
GACTCATAGAGAGAGGGGTT+TGG + Chr5:18364857-18364876 None:intergenic 50.0%
GAGAGTGGACGGGTAACTAT+TGG - Chr5:18365045-18365064 MsG0580025425.01.T01:intron 50.0%
GAGGAGAACAATGCAGATGG+AGG - Chr5:18365075-18365094 MsG0580025425.01.T01:intron 50.0%
GCCGATCCAGATATTGAGCA+AGG - Chr5:18360615-18360634 MsG0580025425.01.T01:intron 50.0%
GCTCTTGTTGCTGAGCTTAC+CGG - Chr5:18361147-18361166 MsG0580025425.01.T01:intron 50.0%
GGATCTGATGTCGGATTGCT+CGG - Chr5:18366195-18366214 MsG0580025425.01.T01:intron 50.0%
GGCGGTGGAGGATTATCTTA+GGG - Chr5:18364562-18364581 MsG0580025425.01.T01:intron 50.0%
GGTGAAAGCTGGGGAGAAAT+GGG - Chr5:18363759-18363778 MsG0580025425.01.T01:intron 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - Chr5:18361351-18361370 MsG0580025425.01.T01:intron 50.0%
GTATTCACACCCTTAGGGTC+TGG + Chr5:18362463-18362482 None:intergenic 50.0%
GTCGGAGAAGAAGGATGAAG+TGG - Chr5:18365931-18365950 MsG0580025425.01.T01:CDS 50.0%
TACAGAAAGCCACAAGGAGC+TGG - Chr5:18363738-18363757 MsG0580025425.01.T01:intron 50.0%
TATCCTCTTCCCTCTCTTCG+AGG - Chr5:18364877-18364896 MsG0580025425.01.T01:intron 50.0%
TCAATGGCCCATAAGAGGTC+AGG + Chr5:18362937-18362956 None:intergenic 50.0%
TCACAACAAGGGTTCGCACA+GGG + Chr5:18362386-18362405 None:intergenic 50.0%
TCCGGTGCAAAGCACACAAA+CGG + Chr5:18362427-18362446 None:intergenic 50.0%
TCCGTTTGTGTGCTTTGCAC+CGG - Chr5:18362423-18362442 MsG0580025425.01.T01:intron 50.0%
TCTTCAGTGCATCGGAGATG+AGG - Chr5:18366591-18366610 MsG0580025425.01.T01:CDS 50.0%
TGACGACGTTGAGGTAGAAG+GGG + Chr5:18364903-18364922 None:intergenic 50.0%
TGATGTTAGAAAGGCGGTGG+AGG - Chr5:18364550-18364569 MsG0580025425.01.T01:intron 50.0%
TGGTGAAAGCTGGGGAGAAA+TGG - Chr5:18363758-18363777 MsG0580025425.01.T01:intron 50.0%
TGGTGGTAACCTTCTTGGTG+TGG - Chr5:18366301-18366320 MsG0580025425.01.T01:intron 50.0%
TTCACGTTGCGGTAGTTGCT+GGG - Chr5:18361040-18361059 MsG0580025425.01.T01:intron 50.0%
TTCAGTGCATCGGAGATGAG+GGG - Chr5:18366593-18366612 MsG0580025425.01.T01:CDS 50.0%
TTGCATCTGCATAGCAGGAC+CGG + Chr5:18363145-18363164 None:intergenic 50.0%
! ACTTTTGCTTCGAGATCGGG+AGG - Chr5:18366528-18366547 MsG0580025425.01.T01:CDS 50.0%
! AGGAAGAGGCGCAATTGTGA+CGG + Chr5:18364189-18364208 None:intergenic 50.0%
! CAGATCGTGGAAGATGATGG+TGG - Chr5:18365211-18365230 MsG0580025425.01.T01:intron 50.0%
! GGTGTGGTGTTTCTGTTGTG+AGG - Chr5:18366317-18366336 MsG0580025425.01.T01:intron 50.0%
! TTGGGTGGTGGTAACCTTCT+TGG - Chr5:18366296-18366315 MsG0580025425.01.T01:intron 50.0%
! TTGTGCACATGGCTGGTCAA+GGG + Chr5:18364384-18364403 None:intergenic 50.0%
! TTTGTGCACATGGCTGGTCA+AGG + Chr5:18364385-18364404 None:intergenic 50.0%
!! CGCTAGCTCTTGTTGCGTTT+TGG - Chr5:18366369-18366388 MsG0580025425.01.T01:CDS 50.0%
!! GCGTCTTAAGTTGGATGGTG+TGG - Chr5:18364610-18364629 MsG0580025425.01.T01:intron 50.0%
!! GGACTAGTGCTGATCAAGAG+GGG - Chr5:18366219-18366238 MsG0580025425.01.T01:intron 50.0%
!! GTGGACTAGTGCTGATCAAG+AGG - Chr5:18366217-18366236 MsG0580025425.01.T01:intron 50.0%
!! TGAGGGGTACCTTGCTGATT+TGG - Chr5:18366609-18366628 MsG0580025425.01.T01:CDS 50.0%
!! TGGGAGCGTCTTAAGTTGGA+TGG - Chr5:18364605-18364624 MsG0580025425.01.T01:intron 50.0%
!! TGGTGTCGTCTTCAGTGCAT+CGG - Chr5:18366583-18366602 MsG0580025425.01.T01:CDS 50.0%
!!! TAAGGGCGTTTTTTGGGTGG+TGG - Chr5:18366284-18366303 MsG0580025425.01.T01:intron 50.0%
AAGAACGGTCCTCCCCATAG+AGG + Chr5:18361022-18361041 None:intergenic 55.0%
AAGCGGAGGTGAAGTGGAAG+GGG - Chr5:18365975-18365994 MsG0580025425.01.T01:CDS 55.0%
ATCTAGGCGACGAGAGAGAG+TGG - Chr5:18365030-18365049 MsG0580025425.01.T01:intron 55.0%
CAAGGAGCTGGTGAAAGCTG+GGG - Chr5:18363750-18363769 MsG0580025425.01.T01:intron 55.0%
CACAAGGAGCTGGTGAAAGC+TGG - Chr5:18363748-18363767 MsG0580025425.01.T01:intron 55.0%
CAGCTTTCACCAGCTCCTTG+TGG + Chr5:18363750-18363769 None:intergenic 55.0%
CTTCACGTTGCGGTAGTTGC+TGG - Chr5:18361039-18361058 MsG0580025425.01.T01:intron 55.0%
GAAAGCGGAGGTGAAGTGGA+AGG - Chr5:18365973-18365992 MsG0580025425.01.T01:CDS 55.0%
GAGGACCGTTCTTCACGTTG+CGG - Chr5:18361029-18361048 MsG0580025425.01.T01:intron 55.0%
GATCGAAAGCGGAGGTGAAG+TGG - Chr5:18365969-18365988 MsG0580025425.01.T01:CDS 55.0%
GCGGAGGAGAACAATGCAGA+TGG - Chr5:18365072-18365091 MsG0580025425.01.T01:intron 55.0%
TAGAAGGGGCCTCGAAGAGA+GGG + Chr5:18364889-18364908 None:intergenic 55.0%
TCGAGTGACAGAGAGAGGGT+GGG - Chr5:18365150-18365169 MsG0580025425.01.T01:intron 55.0%
TCTGATGTCGGATTGCTCGG+TGG - Chr5:18366198-18366217 MsG0580025425.01.T01:intron 55.0%
TCTTCCTCCGTCAACCACTC+TGG + Chr5:18361347-18361366 None:intergenic 55.0%
TGTCCCCGAAGGGACAATTG+AGG - Chr5:18361923-18361942 MsG0580025425.01.T01:intron 55.0%
TGTGGAAGTCGTGGCCACAA+CGG - Chr5:18365894-18365913 MsG0580025425.01.T01:CDS 55.0%
! AAGAGGGGTGTAGGTGGTGT+AGG - Chr5:18366234-18366253 MsG0580025425.01.T01:intron 55.0%
! AGGTAGTGGTGGTTCACAGG+TGG - Chr5:18366110-18366129 MsG0580025425.01.T01:intron 55.0%
! CTGATCAAGAGGGGTGTAGG+TGG - Chr5:18366228-18366247 MsG0580025425.01.T01:intron 55.0%
! GGAACAAGCATTGCAGCGAG+TGG - Chr5:18360312-18360331 MsG0580025425.01.T01:CDS 55.0%
! GGATGTGTTTGAGGTGGGTG+AGG - Chr5:18365562-18365581 MsG0580025425.01.T01:intron 55.0%
! GGTAGGTAGTGGTGGTTCAC+AGG - Chr5:18366107-18366126 MsG0580025425.01.T01:intron 55.0%
! GGTAGTGGTGGTTCACAGGT+GGG - Chr5:18366111-18366130 MsG0580025425.01.T01:intron 55.0%
! GTGCTGATCAAGAGGGGTGT+AGG - Chr5:18366225-18366244 MsG0580025425.01.T01:intron 55.0%
!! ACGGGTAACTATTGGTGGCG+CGG - Chr5:18365053-18365072 MsG0580025425.01.T01:intron 55.0%
ACGGCAGTGATCGAAAGCGG+AGG - Chr5:18365961-18365980 MsG0580025425.01.T01:CDS 60.0%
AGGACCAGAGTGGTTGACGG+AGG - Chr5:18361340-18361359 MsG0580025425.01.T01:intron 60.0%
AGGCGACGAGAGAGAGTGGA+CGG - Chr5:18365034-18365053 MsG0580025425.01.T01:intron 60.0%
AGTGACAGAGAGAGGGTGGG+GGG - Chr5:18365153-18365172 MsG0580025425.01.T01:intron 60.0%
CGAGTGACAGAGAGAGGGTG+GGG - Chr5:18365151-18365170 MsG0580025425.01.T01:intron 60.0%
CTCGAGTGACAGAGAGAGGG+TGG - Chr5:18365149-18365168 MsG0580025425.01.T01:intron 60.0%
GAGTGACAGAGAGAGGGTGG+GGG - Chr5:18365152-18365171 MsG0580025425.01.T01:intron 60.0%
GCAGCTTTCACTGTCCCTGG+TGG - Chr5:18363844-18363863 MsG0580025425.01.T01:CDS 60.0%
GCTGCAGCTTTCACTGTCCC+TGG - Chr5:18363841-18363860 MsG0580025425.01.T01:CDS 60.0%
GGTCCTCCCCATAGAGGATG+TGG + Chr5:18361016-18361035 None:intergenic 60.0%
GTAGAAGGGGCCTCGAAGAG+AGG + Chr5:18364890-18364909 None:intergenic 60.0%
TCGTGCGCTTGACGACGTTG+AGG + Chr5:18364912-18364931 None:intergenic 60.0%
TGGTGGTTCACAGGTGGGTG+TGG - Chr5:18366116-18366135 MsG0580025425.01.T01:intron 60.0%
!! GGTAACTATTGGTGGCGCGG+AGG - Chr5:18365056-18365075 MsG0580025425.01.T01:intron 60.0%
AGTCGTGGCCACAACGGCAG+TGG - Chr5:18365900-18365919 MsG0580025425.01.T01:CDS 65.0%
GGCGACGAGAGAGAGTGGAC+GGG - Chr5:18365035-18365054 MsG0580025425.01.T01:intron 65.0%
GGGCCTCGAAGAGAGGGAAG+AGG + Chr5:18364883-18364902 None:intergenic 65.0%
GTCGTGGCCACAACGGCAGT+GGG - Chr5:18365901-18365920 MsG0580025425.01.T01:CDS 65.0%
TGCGGTAGTTGCTGGGCACG+AGG - Chr5:18361047-18361066 MsG0580025425.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 18360306 18366687 18360306 ID=MsG0580025425.01;Name=MsG0580025425.01
Chr5 mRNA 18360306 18366687 18360306 ID=MsG0580025425.01.T01;Parent=MsG0580025425.01;Name=MsG0580025425.01.T01;_AED=0.44;_eAED=0.47;_QI=0|0|0|0.75|1|1|8|0|729
Chr5 exon 18366357 18366687 18366357 ID=MsG0580025425.01.T01:exon:30365;Parent=MsG0580025425.01.T01
Chr5 exon 18365687 18366091 18365687 ID=MsG0580025425.01.T01:exon:30364;Parent=MsG0580025425.01.T01
Chr5 exon 18364667 18364775 18364667 ID=MsG0580025425.01.T01:exon:30363;Parent=MsG0580025425.01.T01
Chr5 exon 18364404 18364444 18364404 ID=MsG0580025425.01.T01:exon:30362;Parent=MsG0580025425.01.T01
Chr5 exon 18363808 18364244 18363808 ID=MsG0580025425.01.T01:exon:30361;Parent=MsG0580025425.01.T01
Chr5 exon 18362773 18363329 18362773 ID=MsG0580025425.01.T01:exon:30360;Parent=MsG0580025425.01.T01
Chr5 exon 18362271 18362434 18362271 ID=MsG0580025425.01.T01:exon:30359;Parent=MsG0580025425.01.T01
Chr5 exon 18360306 18360451 18360306 ID=MsG0580025425.01.T01:exon:30358;Parent=MsG0580025425.01.T01
Chr5 CDS 18366357 18366687 18366357 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18365687 18366091 18365687 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18364667 18364775 18364667 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18364404 18364444 18364404 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18363808 18364244 18363808 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18362773 18363329 18362773 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18362271 18362434 18362271 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Chr5 CDS 18360306 18360451 18360306 ID=MsG0580025425.01.T01:cds;Parent=MsG0580025425.01.T01
Gene Sequence

>MsG0580025425.01.T01

ATGACAGGAACAAGCATTGCAGCGAGTGGAATAGTTCTTGAACCACTGACCAAAGACAACTACGAAAACTGGAGCTGTCTTGTTAGAAACTATCTTGTGGGAAATGGTCTGTGGGGTGTTGTGACCTCTATTCCTGAAATTGGTGCGCGTTCTAAGACTGAATATGAGATTTGGAACAGGAAGAATGGGAAGGCATTGCATATCATTCAACTAACATGTGGACCAGAGAATCTTACTCATATTAGAGATCTTCATATTGCTAAAGAAGCCTGGAATAAATTGGGTGCAACTTATAGCTCAGATTTACAAGCCGATCCAGATATTGAGCAAGGTGTGGTGGATGATAGTCTCCTTCAATATAAATCGATGCACAAGTATATTGAGAGCGGTGAGTGGAAAGATGCAAACTCGTTTATTAAGAGGGACAGTACAGCAATATATTCCACATCCTCTATGGGGAGGACCGTTCTTCACGTTGCGGTAGTTGCTGGGCACGAGGAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAAGTTAGTGAAAATGAAAGACAATCGAGGTTACACAGCCCTAGCTCTTGTTGCTGAGCTTACCGGAAACACGAATATAGCGAAGTGTATGACTATGGTATATAAGAAAATATCACGGTCAGAGGACCTGTTATCTATGAAGACCAATGATGGTGAAATCCCTGTTCTTCTTGCTGCTGCTAAGGGACACAAAGAAATGACACACAAGTTTTTCTACAATATGCGAATGGTGATTCTGAGGATTATTAATCTTCTCGGTTGTTTCTTTAGGAAGGTTATGTGGACGGATGTTGAATTTATCGCCAGTAAAGGGTCGACTACTCATACTTGTTCACATGTCATTTCAGAATTCGGAATAAGGAAAATATATAATCAGAAAATGACCTACCGTGTAGCTCTTGAAATATTGAGTTGCTTGCACCAAAGAATTCAAGAGTTTAAGGAATCAGAACTTAGAGAGGCTTCGGCTTACGATGCAATGTTGCAAGCAGCAAAGCATGGGATTATTGAGTTTATAGATGCAATGAGAAAGGGTAATCCTGACCTCTTATGGGCCATTGATAAAAATAAAAGAGGCGTATTTTCACATGCAATTTTGAACCGTAGAAAAGCCGTTTTCGAACTCATACATGATGCAACTGTAAATGGACGGAAGGAGATAGTTAAATGCCGTGTAGACGCATTTGGCAATTCCATGTTGCACTTGGCAGGATATTTAGGGCCTTCCTCTGATCTTGATCGTAGATCCGGTCCTGCTATGCAGATGCAAAGAGAAATTCTATGGTTCAAGGCAGTGGAGGAAATTGTGCACCCCAAGTGTAAGGAAGCAAAAAATGCTAACGATAAGAAGCCTCGTGAGCTATTTACAGAAAGCCACAAGGAGCTGGTGAAAGCTGGGGAGAAATGGGCAAAAGATACAGCTGGTTCATTTACTCTTGTGGCTACACTCATCACTACTATCATGTTTGCTGCAGCTTTCACTGTCCCTGGTGGAAACAATCAAGACAATGGAGTTCCCTTGTTCTTGCACGACATCACATTTGATGTGTTTATTATAGCAGATGCAGCATCTCTTTTCACTTCTTCAACTTCGGTCCTTCTCTTCATTGGAATCCTAACAGCTCGTTACGCTGAAAAAGATTTCCTTAAGTCATTGCCACTAAGGTTACTTTTCGCACTCATTGCCCTTTTCTTCTCTGTGGTTTCTATGATAGTTGCCTTTTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCATAGAGTCATAATAACAGCAATGTCATTTGCCAGTGTTCCTGTTATCGTTCTAGTTCCGTCACAATTGCGCCTCTTCCTTGAGATTTTCAAAAAGGCGGTGGAGGATTATCTTAGGGAACATGTGTCGGTTGAAAGTTGGGAGCGTCTTAAGTTGGATGGTGTGGTTTATACAACAATTTCTAAAGAAGAAAATGAACGTTTAATGGCCCATTTTTTGCTGGAAGAGTTTGAAGTTGTGGTGAAAGAGAGTGACGATCGGGAGGTAGAGTCTAGTTGCAAGTTTTTTGACTGGTTATGGTGTCGTCTTCAGTGCATCGGAGATGAGGGGTACCTTGCTGATTTGGTTTTGGAGTTCGGTGGGCCAATCACTTTTGATTCGAGATCGGAAGCTAGACTTTGA
Protein sequence

>MsG0580025425.01.T01

MTGTSIAASGIVLEPLTKDNYENWSCLVRNYLVGNGLWGVVTSIPEIGARSKTEYEIWNRKNGKALHIIQLTCGPENLTHIRDLHIAKEAWNKLGATYSSDLQADPDIEQGVVDDSLLQYKSMHKYIESGEWKDANSFIKRDSTAIYSTSSMGRTVLHVAVVAGHEEIVKKLVKEGKDKLVKMKDNRGYTALALVAELTGNTNIAKCMTMVYKKISRSEDLLSMKTNDGEIPVLLAAAKGHKEMTHKFFYNMRMVILRIINLLGCFFRKVMWTDVEFIASKGSTTHTCSHVISEFGIRKIYNQKMTYRVALEILSCLHQRIQEFKESELREASAYDAMLQAAKHGIIEFIDAMRKGNPDLLWAIDKNKRGVFSHAILNRRKAVFELIHDATVNGRKEIVKCRVDAFGNSMLHLAGYLGPSSDLDRRSGPAMQMQREILWFKAVEEIVHPKCKEAKNANDKKPRELFTESHKELVKAGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDNGVPLFLHDITFDVFIIADAASLFTSSTSVLLFIGILTARYAEKDFLKSLPLRLLFALIALFFSVVSMIVAFCASLAMLLKGHHRVIITAMSFASVPVIVLVPSQLRLFLEIFKKAVEDYLREHVSVESWERLKLDGVVYTTISKEENERLMAHFLLEEFEVVVKESDDREVESSCKFFDWLWCRLQCIGDEGYLADLVLEFGGPITFDSRSEARL*