AlfalfaGEDB | MsG0280007910.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007910.01

KEGG: -
GO: GO:0006952 GO:0009607
PFAM: PF00407

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007910.01.T01	XP_003594832.1	96.815	157	5	0	1	157	1	157	4.58E-103	302

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007910.01.T01	P93333	87.898	157	19	0	1	157	1	157	9.06E-95	273

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007910.01.T01	G7IMY8	96.815	157	5	0	1	157	1	157	2.19e-103	302

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000017.01	MsG0280007910.01	-0.806361	8.538296e-50	4.625173e-47
MsG0180000129.01	MsG0280007910.01	-0.811271	7.610706e-51	4.690248e-48
MsG0180000843.01	MsG0280007910.01	-0.807987	3.864232e-50	2.183357e-47
MsG0180001029.01	MsG0280007910.01	0.808392	3.167578e-50	1.809037e-47
MsG0180001270.01	MsG0280007910.01	-0.810812	9.569492e-51	5.826199e-48
MsG0180002700.01	MsG0280007910.01	-0.819983	8.721714e-53	6.814772e-50
MsG0180003320.01	MsG0280007910.01	0.812711	3.694477e-51	2.365990e-48
MsG0180003452.01	MsG0280007910.01	0.814676	1.364588e-51	9.215285e-49
MsG0180004059.01	MsG0280007910.01	0.800435	1.443212e-48	6.719581e-46
MsG0180004735.01	MsG0280007910.01	-0.805307	1.422180e-49	7.498566e-47
MsG0180005082.01	MsG0280007910.01	0.825215	5.291758e-54	4.793141e-51
MsG0180005130.01	MsG0280007910.01	0.853596	2.152848e-61	4.676660e-58
MsG0180005143.01	MsG0280007910.01	0.851007	1.174394e-60	2.343871e-57
MsG0180005568.01	MsG0280007910.01	-0.803728	3.035761e-49	1.536942e-46
MsG0180006195.01	MsG0280007910.01	0.813872	2.053738e-51	1.357083e-48
MsG0280007513.01	MsG0280007910.01	0.874132	8.578026e-68	3.817102e-64
MsG0280007677.01	MsG0280007910.01	0.816512	5.321915e-52	3.778609e-49
MsG0280007869.01	MsG0280007910.01	0.841635	4.215385e-58	6.232215e-55
MsG0280007910.01	MsG0280008178.01	0.805472	1.312856e-49	6.951765e-47
MsG0280007910.01	MsG0280008180.01	0.802280	6.047396e-49	2.950443e-46
MsG0280007910.01	MsG0280009654.01	0.819528	1.107687e-52	8.545897e-50
MsG0280007910.01	MsG0280009756.01	-0.820303	7.365314e-53	5.806009e-50
MsG0280007910.01	MsG0280010569.01	-0.824822	6.552662e-54	5.869151e-51
MsG0280007910.01	MsG0280010623.01	0.800774	1.230749e-48	5.779598e-46
MsG0280007910.01	MsG0280010926.01	-0.800657	1.300202e-48	6.087973e-46
MsG0280007910.01	MsG0380013212.01	0.803118	4.060550e-49	2.023747e-46
MsG0280007910.01	MsG0380014909.01	-0.807743	4.354763e-50	2.444924e-47
MsG0280007910.01	MsG0380017033.01	-0.809646	1.707480e-50	1.008123e-47
MsG0280007910.01	MsG0380018037.01	-0.801257	9.805428e-49	4.661444e-46
MsG0280007910.01	MsG0480018617.01	0.825382	4.832108e-54	4.397290e-51
MsG0280007910.01	MsG0480018692.01	0.829001	6.570551e-55	6.638411e-52
MsG0280007910.01	MsG0480018693.01	0.870089	1.899057e-66	7.294579e-63
MsG0280007910.01	MsG0480018697.01	0.851832	6.863401e-61	1.406782e-57
MsG0280007910.01	MsG0480019348.01	0.803635	3.172437e-49	1.602321e-46
MsG0280007910.01	MsG0480019501.01	-0.806491	8.015806e-50	4.356661e-47
MsG0280007910.01	MsG0480019971.01	-0.815618	8.430968e-52	5.842048e-49
MsG0280007910.01	MsG0480020285.01	0.828825	7.247142e-55	7.284619e-52
MsG0280007910.01	MsG0480020595.01	0.817706	2.869286e-52	2.104964e-49
MsG0280007910.01	MsG0480021063.01	0.843966	1.012365e-58	1.610401e-55
MsG0280007910.01	MsG0480021091.01	0.831614	1.510953e-55	1.648305e-52
MsG0280007910.01	MsG0480021168.01	-0.804182	2.442101e-49	1.250881e-46
MsG0280007910.01	MsG0480021377.01	-0.805666	1.195671e-49	6.362994e-47
MsG0280007910.01	MsG0480022537.01	-0.810779	9.728188e-51	5.917736e-48
MsG0280007910.01	MsG0480022647.01	-0.810010	1.425361e-50	8.496584e-48
MsG0280007910.01	MsG0480022918.01	-0.827628	1.408369e-54	1.367010e-51
MsG0280007910.01	MsG0480023406.01	-0.815024	1.142811e-51	7.790402e-49
MsG0280007910.01	MsG0480023845.01	-0.804964	1.677777e-49	8.769199e-47
MsG0280007910.01	MsG0480023992.01	-0.805411	1.352493e-49	7.150437e-47
MsG0280007910.01	MsG0580024535.01	0.824798	6.640333e-54	5.943636e-51
MsG0280007910.01	MsG0580025425.01	0.803373	3.594977e-49	1.803491e-46
MsG0280007910.01	MsG0580026521.01	0.811365	7.259568e-51	4.485009e-48
MsG0280007910.01	MsG0580027751.01	0.800283	1.549526e-48	7.186989e-46
MsG0280007910.01	MsG0580027752.01	0.807985	3.866957e-50	2.184815e-47
MsG0280007910.01	MsG0580027753.01	0.804972	1.671043e-49	8.735808e-47
MsG0280007910.01	MsG0580029291.01	0.804548	2.049101e-49	1.059492e-46
MsG0280007910.01	MsG0580029414.01	-0.825416	4.744264e-54	4.321434e-51
MsG0280007910.01	MsG0580029682.01	-0.814059	1.868167e-51	1.240706e-48
MsG0280007910.01	MsG0580029937.01	0.814394	1.575744e-51	1.056107e-48
MsG0280007910.01	MsG0680030464.01	-0.810767	9.785485e-51	5.950742e-48
MsG0280007910.01	MsG0680030680.01	-0.831917	1.271840e-55	1.400060e-52
MsG0280007910.01	MsG0680031200.01	0.825046	5.804128e-54	5.232047e-51
MsG0280007910.01	MsG0680031702.01	-0.800168	1.635612e-48	7.563654e-46
MsG0280007910.01	MsG0680032413.01	-0.809403	1.925315e-50	1.129383e-47
MsG0280007910.01	MsG0680032932.01	0.813795	2.136542e-51	1.408811e-48
MsG0280007910.01	MsG0680032954.01	-0.805969	1.032644e-49	5.538403e-47
MsG0280007910.01	MsG0680034238.01	0.816949	4.248782e-52	3.053244e-49
MsG0280007910.01	MsG0680034391.01	0.828619	8.127514e-55	8.121129e-52
MsG0280007910.01	MsG0680034981.01	0.833378	5.520500e-56	6.346432e-53
MsG0280007910.01	MsG0780035932.01	0.809122	2.211770e-50	1.287730e-47
MsG0280007910.01	MsG0780036260.01	0.809879	1.520837e-50	9.034296e-48
MsG0280007910.01	MsG0780037662.01	-0.812589	3.929045e-51	2.508148e-48
MsG0280007910.01	MsG0780038313.01	0.801388	9.218531e-49	4.396866e-46
MsG0280007910.01	MsG0780038318.01	0.813564	2.401245e-51	1.573494e-48
MsG0280007910.01	MsG0780039186.01	-0.805470	1.314676e-49	6.961020e-47
MsG0280007910.01	MsG0780039686.01	0.824022	1.010722e-53	8.846855e-51
MsG0280007910.01	MsG0780039975.01	-0.814955	1.183733e-51	8.054050e-49
MsG0280007910.01	MsG0780040278.01	-0.802244	6.152022e-49	2.998687e-46
MsG0280007910.01	MsG0780040343.01	-0.821804	3.322121e-53	2.730859e-50
MsG0280007910.01	MsG0780041004.01	-0.848296	6.709502e-60	1.225719e-56
MsG0280007910.01	MsG0780041256.01	-0.808680	2.750071e-50	1.582326e-47
MsG0280007910.01	MsG0880042343.01	-0.807123	5.895342e-50	3.256663e-47
MsG0280007910.01	MsG0880043107.01	-0.820795	5.680010e-53	4.539005e-50
MsG0280007910.01	MsG0880043249.01	-0.812520	4.068292e-51	2.592357e-48
MsG0280007910.01	MsG0880043459.01	0.822286	2.569161e-53	2.141195e-50
MsG0280007910.01	MsG0880043621.01	-0.803791	2.945044e-49	1.493469e-46
MsG0280007910.01	MsG0880044001.01	0.811062	8.446681e-51	5.177069e-48
MsG0280007910.01	MsG0880044028.01	0.822668	2.094144e-53	1.764362e-50
MsG0280007910.01	MsG0880044487.01	-0.800165	1.638080e-48	7.574368e-46
MsG0280007910.01	MsG0880044538.01	-0.834775	2.465826e-56	2.955636e-53
MsG0280007910.01	MsG0880044558.01	-0.809957	1.463684e-50	8.712624e-48
MsG0280007910.01	MsG0880045801.01	0.836928	7.018618e-57	8.976486e-54
MsG0280007910.01	MsG0880046200.01	-0.806094	9.720913e-50	5.230178e-47
MsG0280007910.01	MsG0880046334.01	0.846393	2.233695e-59	3.839212e-56
MsG0280007910.01	MsG0880046399.01	0.821019	5.042622e-53	4.055365e-50
MsG0280007910.01	MsG0880046434.01	0.835709	1.432616e-56	1.766292e-53
MsG0280007910.01	MsG0880046791.01	-0.804759	1.851092e-49	9.624238e-47
MsG0280007910.01	MsG0880046946.01	0.846693	1.850077e-59	3.210993e-56
MsG0280007910.01	MsG0880047259.01	0.802924	4.452372e-49	2.208179e-46
MsG0280007910.01	MsG0880047460.01	0.858657	7.089381e-63	1.822695e-59

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007910.01.T01	MTR_2g035130	96.815	157	5	0	1	157	1	157	5.54e-107	302
MsG0280007910.01.T01	MTR_2g035150	86.076	158	22	0	1	158	1	158	3.67e-97	277
MsG0280007910.01.T01	MTR_2g035100	87.898	157	19	0	1	157	1	157	8.82e-96	273
MsG0280007910.01.T01	MTR_2g035120	86.076	158	22	0	1	158	1	158	4.24e-95	272
MsG0280007910.01.T01	MTR_2g035105	86.624	157	21	0	1	157	1	157	2.19e-94	270
MsG0280007910.01.T01	MTR_6g033450	68.987	158	49	0	1	158	1	158	1.36e-77	228
MsG0280007910.01.T01	MTR_4g120970	68.987	158	49	0	1	158	1	158	1.36e-77	228
MsG0280007910.01.T01	MTR_2g035320	61.146	157	61	0	1	157	1	157	1.56e-64	194
MsG0280007910.01.T01	MTR_2g035190	59.236	157	64	0	1	157	1	157	2.29e-62	189
MsG0280007910.01.T01	MTR_2g035210	57.962	157	66	0	1	157	1	157	2.29e-60	184
MsG0280007910.01.T01	MTR_2g035220	57.962	157	66	0	1	157	1	157	3.77e-59	181
MsG0280007910.01.T01	MTR_2g035170	56.688	157	68	0	1	157	1	157	9.23e-59	180
MsG0280007910.01.T01	MTR_2g435310	38.462	156	95	1	1	155	1	156	7.14e-38	127
MsG0280007910.01.T01	MTR_4g120760	39.490	157	94	1	1	156	1	157	1.46e-37	126
MsG0280007910.01.T01	MTR_4g120760	39.490	157	94	1	1	156	1	157	1.56e-37	126
MsG0280007910.01.T01	MTR_2g035320	57.576	99	42	0	59	157	24	122	6.01e-35	118
MsG0280007910.01.T01	MTR_4g120950	45.062	162	82	5	1	158	1	159	9.79e-34	117
MsG0280007910.01.T01	MTR_4g120940	61.798	89	31	1	70	158	35	120	1.52e-31	110

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 46 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACAGCATAGTTGGTGGTTT+TGG	0.149266	2:+22802085	MsG0280007910.01.T01:CDS
CTTAGTAGATGATGTTAATT+TGG	0.195092	2:+22802054	MsG0280007910.01.T01:CDS
TGATGGCATCAATAACCTTT+GGG	0.301288	2:-22801229	None:intergenic
AGTAGCAAGTTAGCATATAA+TGG	0.315523	2:+22801118	MsG0280007910.01.T01:exon
AACGATATCAATACTCTTGA+TGG	0.325047	2:-22801246	None:intergenic
TTTGCAATGGTTCCTCCATT+TGG	0.327211	2:-22802160	None:intergenic
TATATGCTTTAGTTGTAATC+AGG	0.341112	2:-22802301	None:intergenic
GAAATCTTCTCCACTGTGTC+TGG	0.343745	2:-22802112	None:intergenic
TTGATGGCATCAATAACCTT+TGG	0.345179	2:-22801230	None:intergenic
GGCTCTTGAAGGTTATGTTT+TGG	0.350667	2:+22802273	MsG0280007910.01.T01:CDS
CACTTTGTGCAACACATACT+TGG	0.384404	2:-22802029	None:intergenic
TATATCATGTGTGCTTGATT+TGG	0.389507	2:+22802373	MsG0280007910.01.T01:three_prime_UTR
CATCAATAACCTTTGGGGTA+AGG	0.433870	2:-22801223	None:intergenic
ACTAGGTGCAAAATCACCTT+TGG	0.438881	2:-22802203	None:intergenic
TGCTTTGCTTGCTTTATACA+TGG	0.441815	2:+22802330	MsG0280007910.01.T01:three_prime_UTR
GTAGCAAGTTAGCATATAAT+GGG	0.454827	2:+22801119	MsG0280007910.01.T01:exon
ATCATGTGTGCTTGATTTGG+CGG	0.459609	2:+22802376	MsG0280007910.01.T01:three_prime_UTR
GCTTACCACTACAGCATAGT+TGG	0.461060	2:+22802076	MsG0280007910.01.T01:CDS
AAGAGTATTGATATCGTTGA+AGG	0.465901	2:+22801251	MsG0280007910.01.T01:CDS
AGTGGAGAAGATTTCATTTG+AGG	0.476098	2:+22802120	MsG0280007910.01.T01:CDS
AAATTGTCTGCAGGACCAAA+TGG	0.477800	2:+22802145	MsG0280007910.01.T01:CDS
AGAGCTTTGTAAAGTGTAGC+AGG	0.480318	2:-22801182	None:intergenic
ACTCACACTTCCACAACAAA+AGG	0.482152	2:-22802444	None:intergenic
TTTGAGGCTAAATTGTCTGC+AGG	0.494016	2:+22802136	MsG0280007910.01.T01:CDS
AATGGCAAAGCTAGGGGTGA+TGG	0.523022	2:+22802241	MsG0280007910.01.T01:CDS
TTCTTGAGTTCCTCTTCACT+AGG	0.524188	2:-22802220	None:intergenic
CAAGTATGTGTTGCACAAAG+TGG	0.538293	2:+22802030	MsG0280007910.01.T01:CDS
AACTCAAGAATGGCAAAGCT+AGG	0.540466	2:+22802233	MsG0280007910.01.T01:CDS
ACTCAAGAATGGCAAAGCTA+GGG	0.556431	2:+22802234	MsG0280007910.01.T01:CDS
GTTGAAGGAGACGGTGGCGC+CGG	0.560015	2:+22801266	MsG0280007910.01.T01:CDS
TGTAGCAGGAGCTACAATAG+AGG	0.565152	2:-22801168	None:intergenic
TATTATAATTTACTGAAGCA+AGG	0.566711	2:-22802489	None:intergenic
TACCACTACAGCATAGTTGG+TGG	0.567411	2:+22802079	MsG0280007910.01.T01:CDS
TTTCACACTAAGCTTTGCAA+TGG	0.568267	2:-22802173	None:intergenic
GATGGCATCAATAACCTTTG+GGG	0.578696	2:-22801228	None:intergenic
AAGTTGCTTAATTATTTGTG+TGG	0.582347	2:-22801063	None:intergenic
AGTGAAGAGGAACTCAAGAA+TGG	0.584353	2:+22802223	MsG0280007910.01.T01:CDS
ATTGATATCGTTGAAGGAGA+CGG	0.588878	2:+22801257	MsG0280007910.01.T01:CDS
ATATGCTAACTTGCTACTGA+AGG	0.594895	2:-22801113	None:intergenic
AACCACCAACTATGCTGTAG+TGG	0.607193	2:-22802081	None:intergenic
TGCTGACAACCTTACCCCAA+AGG	0.621335	2:+22801214	MsG0280007910.01.T01:CDS
CTCAAGAATGGCAAAGCTAG+GGG	0.641253	2:+22802235	MsG0280007910.01.T01:CDS
AGTGTGAAATACTTCACCAA+AGG	0.651010	2:+22802187	MsG0280007910.01.T01:CDS
AGCAGGAGCTACAATAGAGG+TGG	0.665165	2:-22801165	None:intergenic
TTGTCTGCAGGACCAAATGG+AGG	0.666387	2:+22802148	MsG0280007910.01.T01:CDS
GATATCGTTGAAGGAGACGG+TGG	0.715509	2:+22801260	MsG0280007910.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTATATATAAAATAAT+AGG	+	Chr2:22801971-22801990	MsG0280007910.01.T01:intron	0.0%
!!	ATCATTACTAGTATTATATA+AGG	+	Chr2:22801931-22801950	MsG0280007910.01.T01:intron	15.0%
!!	GTGATAAAAAAATTGATAAA+CGG	-	Chr2:22801547-22801566	None:intergenic	15.0%
!!	ACTCTTATGATTAACATATT+TGG	+	Chr2:22801456-22801475	MsG0280007910.01.T01:intron	20.0%
!!	ATATTTGGTTGCTAATTAAT+TGG	+	Chr2:22801471-22801490	MsG0280007910.01.T01:intron	20.0%
!!	TATTATAATTTACTGAAGCA+AGG	-	Chr2:22802492-22802511	None:intergenic	20.0%
!	AAAATTGATAAACGGTAAAG+TGG	-	Chr2:22801539-22801558	None:intergenic	25.0%
!	AGAAAAAGAGAGAATTACAT+TGG	-	Chr2:22802402-22802421	None:intergenic	25.0%
!	CTTAGTAGATGATGTTAATT+TGG	+	Chr2:22802054-22802073	MsG0280007910.01.T01:CDS	25.0%
!	CTTTCAAATATACCGTTAAA+AGG	-	Chr2:22801730-22801749	None:intergenic	25.0%
!	GACTAAACTATACTTATTTC+CGG	-	Chr2:22801806-22801825	None:intergenic	25.0%
!	TATATGCTTTAGTTGTAATC+AGG	-	Chr2:22802304-22802323	None:intergenic	25.0%
!	TTAGTCAAAGACAAATTGTT+CGG	-	Chr2:22801848-22801867	None:intergenic	25.0%
!!	AGAATGCTAGAATATTCTTT+TGG	+	Chr2:22801748-22801767	MsG0280007910.01.T01:intron	25.0%
	AACACAATTGCTTGATTAAC+TGG	+	Chr2:22801885-22801904	MsG0280007910.01.T01:intron	30.0%
	AACGATATCAATACTCTTGA+TGG	-	Chr2:22801249-22801268	None:intergenic	30.0%
	AGTAGCAAGTTAGCATATAA+TGG	+	Chr2:22801118-22801137	MsG0280007910.01.T01:exon	30.0%
	CTTAGTGATCTCATTCTTTA+TGG	+	Chr2:22801694-22801713	MsG0280007910.01.T01:intron	30.0%
	GATCTCATTCTTTATGGAAT+AGG	+	Chr2:22801700-22801719	MsG0280007910.01.T01:intron	30.0%
	GTAGCAAGTTAGCATATAAT+GGG	+	Chr2:22801119-22801138	MsG0280007910.01.T01:exon	30.0%
	TAAAGAATGAGATCACTAAG+AGG	-	Chr2:22801694-22801713	None:intergenic	30.0%
	TAGTCAAAGACAAATTGTTC+GGG	-	Chr2:22801847-22801866	None:intergenic	30.0%
	TATATCATGTGTGCTTGATT+TGG	+	Chr2:22802373-22802392	MsG0280007910.01.T01:three_prime_UTR	30.0%
	TCAAGTATACCAAATCAATG+TGG	-	Chr2:22801612-22801631	None:intergenic	30.0%
	TTCTAATCTGAGTATCATTC+CGG	+	Chr2:22801784-22801803	MsG0280007910.01.T01:intron	30.0%
!	ATCAAAGTGTCACAATTACT+AGG	-	Chr2:22801573-22801592	None:intergenic	30.0%
!	GAAGAATAACCACATTGATT+TGG	+	Chr2:22801600-22801619	MsG0280007910.01.T01:intron	30.0%
!	GACAAAAGTGATTTTCTTGA+TGG	-	Chr2:22801294-22801313	None:intergenic	30.0%
!!	AAGAAAATCACTTTTGTCGA+AGG	+	Chr2:22801296-22801315	MsG0280007910.01.T01:CDS	30.0%
!!	AAGAGTATTGATATCGTTGA+AGG	+	Chr2:22801251-22801270	MsG0280007910.01.T01:CDS	30.0%
!!	CTATTTCTTTCCTTTTGTTG+TGG	+	Chr2:22802434-22802453	MsG0280007910.01.T01:three_prime_UTR	30.0%
	AGTGGAGAAGATTTCATTTG+AGG	+	Chr2:22802120-22802139	MsG0280007910.01.T01:CDS	35.0%
	AGTGTGAAATACTTCACCAA+AGG	+	Chr2:22802187-22802206	MsG0280007910.01.T01:CDS	35.0%
	ATCTAACTGCGAAATTCACA+CGG	+	Chr2:22801362-22801381	MsG0280007910.01.T01:intron	35.0%
	ATTGATATCGTTGAAGGAGA+CGG	+	Chr2:22801257-22801276	MsG0280007910.01.T01:CDS	35.0%
	TGATGGCATCAATAACCTTT+GGG	-	Chr2:22801232-22801251	None:intergenic	35.0%
	TGCTTTGCTTGCTTTATACA+TGG	+	Chr2:22802330-22802349	MsG0280007910.01.T01:three_prime_UTR	35.0%
	TTTAACCAATGATGTGCAGA+TGG	+	Chr2:22802001-22802020	MsG0280007910.01.T01:intron	35.0%
	TTTCACACTAAGCTTTGCAA+TGG	-	Chr2:22802176-22802195	None:intergenic	35.0%
!	AATGGGTGTTTTCAACTTTG+AGG	+	Chr2:22801136-22801155	MsG0280007910.01.T01:exon	35.0%
!	GGAATAGGTCATCCTTTTAA+CGG	+	Chr2:22801715-22801734	MsG0280007910.01.T01:intron	35.0%
!	TCTGCACATCATTGGTTAAA+AGG	-	Chr2:22802001-22802020	None:intergenic	35.0%
!	TTGATGGCATCAATAACCTT+TGG	-	Chr2:22801233-22801252	None:intergenic	35.0%
!!	AGTGATTTTCTTGATGGTTC+CGG	-	Chr2:22801288-22801307	None:intergenic	35.0%
!!	ATATGCTAACTTGCTACTGA+AGG	-	Chr2:22801116-22801135	None:intergenic	35.0%
	AAATTGTCTGCAGGACCAAA+TGG	+	Chr2:22802145-22802164	MsG0280007910.01.T01:CDS	40.0%
	AACTCAAGAATGGCAAAGCT+AGG	+	Chr2:22802233-22802252	MsG0280007910.01.T01:CDS	40.0%
	ACTAGGTGCAAAATCACCTT+TGG	-	Chr2:22802206-22802225	None:intergenic	40.0%
	ACTCAAGAATGGCAAAGCTA+GGG	+	Chr2:22802234-22802253	MsG0280007910.01.T01:CDS	40.0%
	ACTCACACTTCCACAACAAA+AGG	-	Chr2:22802447-22802466	None:intergenic	40.0%
	AGTGAAGAGGAACTCAAGAA+TGG	+	Chr2:22802223-22802242	MsG0280007910.01.T01:CDS	40.0%
	CAAGTATGTGTTGCACAAAG+TGG	+	Chr2:22802030-22802049	MsG0280007910.01.T01:CDS	40.0%
	CACTTTGTGCAACACATACT+TGG	-	Chr2:22802032-22802051	None:intergenic	40.0%
	GATGGCATCAATAACCTTTG+GGG	-	Chr2:22801231-22801250	None:intergenic	40.0%
	TTCTTGAGTTCCTCTTCACT+AGG	-	Chr2:22802223-22802242	None:intergenic	40.0%
	TTTCACCATCTGCACATCAT+TGG	-	Chr2:22802009-22802028	None:intergenic	40.0%
	TTTGCAATGGTTCCTCCATT+TGG	-	Chr2:22802163-22802182	None:intergenic	40.0%
!	AGAGCTTTGTAAAGTGTAGC+AGG	-	Chr2:22801185-22801204	None:intergenic	40.0%
!	GGCTCTTGAAGGTTATGTTT+TGG	+	Chr2:22802273-22802292	MsG0280007910.01.T01:CDS	40.0%
!	TGATTTTGCACCTAGTGAAG+AGG	+	Chr2:22802210-22802229	MsG0280007910.01.T01:CDS	40.0%
!	TTTGAGGCTAAATTGTCTGC+AGG	+	Chr2:22802136-22802155	MsG0280007910.01.T01:CDS	40.0%
!!	ATCATGTGTGCTTGATTTGG+CGG	+	Chr2:22802376-22802395	MsG0280007910.01.T01:three_prime_UTR	40.0%
!!	CATCAATAACCTTTGGGGTA+AGG	-	Chr2:22801226-22801245	None:intergenic	40.0%
!!!	ACAGCATAGTTGGTGGTTTT+GGG	+	Chr2:22802086-22802105	MsG0280007910.01.T01:CDS	40.0%
!!!	TACAGCATAGTTGGTGGTTT+TGG	+	Chr2:22802085-22802104	MsG0280007910.01.T01:CDS	40.0%
	AACCACCAACTATGCTGTAG+TGG	-	Chr2:22802084-22802103	None:intergenic	45.0%
	CTCAAGAATGGCAAAGCTAG+GGG	+	Chr2:22802235-22802254	MsG0280007910.01.T01:CDS	45.0%
	GAAATCTTCTCCACTGTGTC+TGG	-	Chr2:22802115-22802134	None:intergenic	45.0%
	GCTTACCACTACAGCATAGT+TGG	+	Chr2:22802076-22802095	MsG0280007910.01.T01:CDS	45.0%
	TACCACTACAGCATAGTTGG+TGG	+	Chr2:22802079-22802098	MsG0280007910.01.T01:CDS	45.0%
	TGTAGCAGGAGCTACAATAG+AGG	-	Chr2:22801171-22801190	None:intergenic	45.0%
!!	GGTCTTTTCAAGGCTCTTGA+AGG	+	Chr2:22802262-22802281	MsG0280007910.01.T01:CDS	45.0%
!!	TAGGGGTGATGGTCTTTTCA+AGG	+	Chr2:22802252-22802271	MsG0280007910.01.T01:CDS	45.0%
	AATGGCAAAGCTAGGGGTGA+TGG	+	Chr2:22802241-22802260	MsG0280007910.01.T01:CDS	50.0%
	AGCAGGAGCTACAATAGAGG+TGG	-	Chr2:22801168-22801187	None:intergenic	50.0%
	GATATCGTTGAAGGAGACGG+TGG	+	Chr2:22801260-22801279	MsG0280007910.01.T01:CDS	50.0%
	TGCTGACAACCTTACCCCAA+AGG	+	Chr2:22801214-22801233	MsG0280007910.01.T01:CDS	50.0%
	TTGTCTGCAGGACCAAATGG+AGG	+	Chr2:22802148-22802167	MsG0280007910.01.T01:CDS	50.0%
!	TTTTGGGCTTCCAGACACAG+TGG	+	Chr2:22802102-22802121	MsG0280007910.01.T01:CDS	50.0%
	GTTGAAGGAGACGGTGGCGC+CGG	+	Chr2:22801266-22801285	MsG0280007910.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	22801065	22802526	22801065	ID=MsG0280007910.01;Name=MsG0280007910.01
Chr2	mRNA	22801065	22802526	22801065	ID=MsG0280007910.01.T01;Parent=MsG0280007910.01;Name=MsG0280007910.01.T01;_AED=0.50;_eAED=0.50;_QI=72\|1\|1\|1\|1\|1\|2\|211\|158
Chr2	exon	22801065	22801317	22801065	ID=MsG0280007910.01.T01:exon:13872;Parent=MsG0280007910.01.T01
Chr2	exon	22802020	22802526	22802020	ID=MsG0280007910.01.T01:exon:13873;Parent=MsG0280007910.01.T01
Chr2	five_prime_UTR	22801065	22801136	22801065	ID=MsG0280007910.01.T01:five_prime_utr;Parent=MsG0280007910.01.T01
Chr2	CDS	22801137	22801317	22801137	ID=MsG0280007910.01.T01:cds;Parent=MsG0280007910.01.T01
Chr2	CDS	22802020	22802315	22802020	ID=MsG0280007910.01.T01:cds;Parent=MsG0280007910.01.T01
Chr2	three_prime_UTR	22802316	22802526	22802316	ID=MsG0280007910.01.T01:three_prime_utr;Parent=MsG0280007910.01.T01

Gene Sequence

>MsG0280007910.01.T01

ATGGGTGTTTTCAACTTTGAGGATGAAACCACCTCTATTGTAGCTCCTGCTACACTTTACAAAGCTCTTGTTACAGATGCTGACAACCTTACCCCAAAGGTTATTGATGCCATCAAGAGTATTGATATCGTTGAAGGAGACGGTGGCGCCGGAACCATCAAGAAAATCACTTTTGTCGAAGATGGTGAAACCAAGTATGTGTTGCACAAAGTGGACTTAGTAGATGATGTTAATTTGGCTTACCACTACAGCATAGTTGGTGGTTTTGGGCTTCCAGACACAGTGGAGAAGATTTCATTTGAGGCTAAATTGTCTGCAGGACCAAATGGAGGAACCATTGCAAAGCTTAGTGTGAAATACTTCACCAAAGGTGATTTTGCACCTAGTGAAGAGGAACTCAAGAATGGCAAAGCTAGGGGTGATGGTCTTTTCAAGGCTCTTGAAGGTTATGTTTTGGCAAATCCTGATTACAACTAA

Protein sequence

>MsG0280007910.01.T01

MGVFNFEDETTSIVAPATLYKALVTDADNLTPKVIDAIKSIDIVEGDGGAGTIKKITFVEDGETKYVLHKVDLVDDVNLAYHYSIVGGFGLPDTVEKISFEAKLSAGPNGGTIAKLSVKYFTKGDFAPSEEELKNGKARGDGLFKALEGYVLANPDYN*