Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025559.01.T01 | XP_003612918.1 | 98.316 | 297 | 5 | 0 | 9 | 305 | 1 | 297 | 0 | 591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025559.01.T01 | Q93XM7 | 76 | 300 | 69 | 1 | 9 | 305 | 1 | 300 | 9.02E-170 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025559.01.T01 | G7KF41 | 98.316 | 297 | 5 | 0 | 9 | 305 | 1 | 297 | 0.0 | 591 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580025559.01 | MsG0280011322.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025559.01.T01 | MTR_5g030530 | 98.316 | 297 | 5 | 0 | 9 | 305 | 1 | 297 | 0.0 | 591 |
| MsG0580025559.01.T01 | MTR_8g066975 | 84.512 | 297 | 46 | 0 | 9 | 305 | 1 | 297 | 0.0 | 514 |
| MsG0580025559.01.T01 | MTR_4g088545 | 35.256 | 312 | 176 | 9 | 9 | 305 | 1 | 301 | 1.25e-44 | 154 |
| MsG0580025559.01.T01 | MTR_2g102010 | 34.437 | 302 | 179 | 6 | 7 | 304 | 8 | 294 | 1.96e-43 | 150 |
| MsG0580025559.01.T01 | MTR_4g012850 | 32.180 | 289 | 178 | 6 | 14 | 299 | 14 | 287 | 7.56e-40 | 141 |
| MsG0580025559.01.T01 | MTR_4g012850 | 28.643 | 199 | 124 | 6 | 14 | 207 | 107 | 292 | 3.67e-11 | 63.2 |
| MsG0580025559.01.T01 | MTR_4g088545 | 35.135 | 259 | 145 | 7 | 9 | 253 | 1 | 250 | 5.21e-35 | 128 |
| MsG0580025559.01.T01 | MTR_4g088545 | 27.979 | 193 | 127 | 4 | 114 | 301 | 10 | 195 | 1.85e-15 | 75.1 |
| MsG0580025559.01.T01 | MTR_8g027975 | 29.607 | 331 | 195 | 8 | 1 | 305 | 36 | 354 | 2.20e-30 | 117 |
| MsG0580025559.01.T01 | MTR_4g088545 | 36.765 | 204 | 112 | 6 | 9 | 204 | 1 | 195 | 1.40e-29 | 113 |
| MsG0580025559.01.T01 | MTR_4g088545 | 27.979 | 193 | 127 | 4 | 114 | 301 | 10 | 195 | 6.61e-16 | 75.9 |
| MsG0580025559.01.T01 | MTR_5g009500 | 29.245 | 318 | 189 | 7 | 12 | 305 | 34 | 339 | 2.28e-28 | 112 |
| MsG0580025559.01.T01 | MTR_5g009500 | 27.723 | 202 | 130 | 4 | 110 | 304 | 32 | 224 | 2.35e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_2g436930 | 27.900 | 319 | 189 | 10 | 17 | 304 | 16 | 324 | 6.78e-28 | 110 |
| MsG0580025559.01.T01 | MTR_7g109135 | 28.520 | 277 | 186 | 6 | 32 | 304 | 38 | 306 | 1.59e-26 | 106 |
| MsG0580025559.01.T01 | MTR_7g109135 | 29.341 | 167 | 111 | 2 | 119 | 283 | 25 | 186 | 2.97e-15 | 75.5 |
| MsG0580025559.01.T01 | MTR_4g119770 | 26.667 | 330 | 199 | 9 | 8 | 304 | 6 | 325 | 5.69e-26 | 105 |
| MsG0580025559.01.T01 | MTR_5g055410 | 28.571 | 280 | 182 | 8 | 32 | 304 | 37 | 305 | 4.58e-24 | 100 |
| MsG0580025559.01.T01 | MTR_5g055410 | 25.389 | 193 | 123 | 7 | 31 | 215 | 134 | 313 | 1.53e-11 | 64.7 |
| MsG0580025559.01.T01 | MTR_1g090330 | 27.437 | 277 | 190 | 6 | 32 | 305 | 30 | 298 | 7.56e-24 | 99.0 |
| MsG0580025559.01.T01 | MTR_1g090330 | 27.895 | 190 | 128 | 5 | 19 | 206 | 114 | 296 | 3.51e-14 | 72.0 |
| MsG0580025559.01.T01 | MTR_1g087840 | 26.715 | 277 | 191 | 6 | 32 | 304 | 35 | 303 | 1.41e-22 | 95.9 |
| MsG0580025559.01.T01 | MTR_1g087840 | 25.946 | 185 | 123 | 6 | 28 | 209 | 132 | 305 | 3.82e-11 | 63.2 |
| MsG0580025559.01.T01 | MTR_7g109135 | 28.814 | 236 | 156 | 6 | 73 | 304 | 1 | 228 | 1.60e-22 | 94.4 |
| MsG0580025559.01.T01 | MTR_3g025800 | 27.726 | 321 | 187 | 12 | 12 | 302 | 24 | 329 | 1.86e-22 | 96.3 |
| MsG0580025559.01.T01 | MTR_3g025800 | 27.602 | 221 | 122 | 6 | 108 | 303 | 20 | 227 | 1.26e-11 | 65.1 |
| MsG0580025559.01.T01 | MTR_4g114320 | 24.585 | 301 | 205 | 5 | 7 | 304 | 113 | 394 | 2.99e-22 | 96.3 |
| MsG0580025559.01.T01 | MTR_7g109135 | 27.076 | 277 | 183 | 6 | 32 | 304 | 38 | 299 | 1.45e-21 | 93.2 |
| MsG0580025559.01.T01 | MTR_7g109135 | 28.743 | 167 | 105 | 3 | 119 | 283 | 25 | 179 | 6.40e-12 | 65.5 |
| MsG0580025559.01.T01 | MTR_1g012030 | 25.850 | 294 | 195 | 6 | 14 | 304 | 137 | 410 | 5.59e-21 | 92.8 |
| MsG0580025559.01.T01 | MTR_3g104600 | 27.451 | 306 | 200 | 7 | 14 | 305 | 33 | 330 | 1.55e-20 | 90.5 |
| MsG0580025559.01.T01 | MTR_3g107510 | 25.510 | 294 | 196 | 6 | 14 | 304 | 120 | 393 | 1.81e-20 | 91.3 |
| MsG0580025559.01.T01 | MTR_8g098240 | 27.740 | 292 | 182 | 9 | 18 | 305 | 322 | 588 | 3.22e-20 | 91.3 |
| MsG0580025559.01.T01 | MTR_8g076760 | 26.667 | 285 | 178 | 11 | 31 | 298 | 29 | 299 | 6.40e-20 | 88.6 |
| MsG0580025559.01.T01 | MTR_4g057850 | 28.671 | 286 | 179 | 9 | 18 | 294 | 24 | 293 | 7.54e-20 | 88.2 |
| MsG0580025559.01.T01 | MTR_4g057850 | 31.250 | 176 | 110 | 4 | 27 | 199 | 128 | 295 | 4.77e-16 | 77.4 |
| MsG0580025559.01.T01 | MTR_3g462140 | 31.095 | 283 | 170 | 10 | 32 | 304 | 31 | 298 | 1.03e-19 | 87.8 |
| MsG0580025559.01.T01 | MTR_3g462140 | 29.348 | 184 | 115 | 4 | 27 | 209 | 131 | 300 | 3.04e-15 | 75.1 |
| MsG0580025559.01.T01 | MTR_3g462140 | 28.358 | 201 | 135 | 5 | 110 | 304 | 9 | 206 | 1.28e-14 | 73.2 |
| MsG0580025559.01.T01 | MTR_7g109135 | 29.245 | 212 | 138 | 6 | 97 | 304 | 4 | 207 | 2.63e-19 | 85.1 |
| MsG0580025559.01.T01 | MTR_6g091800 | 25.166 | 302 | 205 | 7 | 13 | 304 | 16 | 306 | 3.02e-19 | 86.7 |
| MsG0580025559.01.T01 | MTR_7g066690 | 28.929 | 280 | 173 | 10 | 32 | 301 | 33 | 296 | 6.57e-19 | 85.5 |
| MsG0580025559.01.T01 | MTR_7g066690 | 26.733 | 202 | 133 | 3 | 8 | 207 | 111 | 299 | 9.36e-17 | 79.3 |
| MsG0580025559.01.T01 | MTR_7g066690 | 27.225 | 191 | 126 | 4 | 125 | 304 | 19 | 207 | 7.38e-14 | 71.2 |
| MsG0580025559.01.T01 | MTR_6g034515 | 27.758 | 281 | 175 | 5 | 31 | 304 | 82 | 341 | 1.16e-18 | 85.5 |
| MsG0580025559.01.T01 | MTR_4g018750 | 29.286 | 280 | 172 | 10 | 32 | 301 | 31 | 294 | 1.27e-18 | 84.7 |
| MsG0580025559.01.T01 | MTR_4g018750 | 26.368 | 201 | 133 | 3 | 8 | 206 | 109 | 296 | 1.43e-15 | 75.9 |
| MsG0580025559.01.T01 | MTR_4g018750 | 27.749 | 191 | 125 | 4 | 125 | 304 | 17 | 205 | 1.71e-15 | 75.9 |
| MsG0580025559.01.T01 | MTR_7g084400 | 26.667 | 300 | 182 | 10 | 16 | 304 | 213 | 485 | 1.08e-17 | 83.6 |
| MsG0580025559.01.T01 | MTR_3g104500 | 23.432 | 303 | 214 | 9 | 8 | 301 | 26 | 319 | 2.81e-17 | 81.3 |
| MsG0580025559.01.T01 | MTR_3g098460 | 26.490 | 302 | 189 | 10 | 13 | 304 | 202 | 480 | 3.53e-17 | 82.0 |
| MsG0580025559.01.T01 | MTR_2g436930 | 26.337 | 243 | 147 | 8 | 84 | 304 | 2 | 234 | 3.54e-17 | 79.7 |
| MsG0580025559.01.T01 | MTR_8g096050 | 26.578 | 301 | 190 | 8 | 13 | 304 | 224 | 502 | 3.18e-16 | 79.3 |
| MsG0580025559.01.T01 | MTR_5g073040 | 27.517 | 298 | 181 | 11 | 16 | 302 | 39 | 312 | 6.77e-16 | 77.4 |
| MsG0580025559.01.T01 | MTR_6g091800 | 23.313 | 326 | 205 | 7 | 13 | 304 | 16 | 330 | 7.41e-16 | 77.4 |
| MsG0580025559.01.T01 | MTR_8g092080 | 31.500 | 200 | 106 | 5 | 103 | 301 | 38 | 207 | 8.23e-16 | 77.0 |
| MsG0580025559.01.T01 | MTR_8g092080 | 27.698 | 278 | 156 | 11 | 11 | 281 | 43 | 282 | 1.91e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_8g092080 | 30.097 | 206 | 121 | 6 | 15 | 218 | 132 | 316 | 2.04e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_4g018750 | 27.749 | 191 | 125 | 4 | 125 | 304 | 17 | 205 | 2.04e-15 | 75.5 |
| MsG0580025559.01.T01 | MTR_4g018750 | 29.339 | 242 | 145 | 10 | 32 | 263 | 31 | 256 | 1.73e-13 | 69.7 |
| MsG0580025559.01.T01 | MTR_1g097890 | 31.156 | 199 | 106 | 5 | 104 | 301 | 38 | 206 | 5.51e-15 | 74.3 |
| MsG0580025559.01.T01 | MTR_1g097890 | 30.244 | 205 | 124 | 4 | 4 | 208 | 120 | 305 | 5.47e-14 | 71.6 |
| MsG0580025559.01.T01 | MTR_1g097890 | 27.341 | 267 | 153 | 9 | 18 | 281 | 53 | 281 | 1.98e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_7g015870 | 27.273 | 286 | 173 | 11 | 31 | 298 | 40 | 308 | 6.72e-15 | 74.3 |
| MsG0580025559.01.T01 | MTR_7g015870 | 27.273 | 286 | 173 | 11 | 31 | 298 | 36 | 304 | 1.09e-14 | 73.9 |
| MsG0580025559.01.T01 | MTR_4g119770 | 25.379 | 264 | 164 | 7 | 8 | 248 | 6 | 259 | 1.17e-14 | 72.8 |
| MsG0580025559.01.T01 | MTR_4g119770 | 27.363 | 201 | 129 | 6 | 112 | 298 | 7 | 204 | 2.23e-13 | 69.3 |
| MsG0580025559.01.T01 | MTR_1g088995 | 28.114 | 281 | 180 | 8 | 29 | 305 | 46 | 308 | 1.25e-14 | 73.6 |
| MsG0580025559.01.T01 | MTR_5g081910 | 24.272 | 309 | 199 | 8 | 28 | 305 | 20 | 324 | 6.37e-14 | 71.6 |
| MsG0580025559.01.T01 | MTR_6g091800 | 25.926 | 243 | 162 | 6 | 13 | 248 | 16 | 247 | 7.41e-14 | 70.5 |
| MsG0580025559.01.T01 | MTR_6g091800 | 25.926 | 243 | 162 | 6 | 13 | 248 | 16 | 247 | 1.34e-13 | 70.1 |
| MsG0580025559.01.T01 | MTR_7g064980 | 25.126 | 199 | 136 | 4 | 11 | 208 | 129 | 315 | 2.93e-13 | 69.7 |
| MsG0580025559.01.T01 | MTR_7g064980 | 24.684 | 316 | 200 | 10 | 8 | 304 | 18 | 314 | 3.11e-11 | 63.5 |
| MsG0580025559.01.T01 | MTR_3g100570 | 26.020 | 196 | 140 | 2 | 12 | 207 | 120 | 310 | 3.60e-13 | 69.3 |
| MsG0580025559.01.T01 | MTR_3g100570 | 23.397 | 312 | 200 | 8 | 22 | 304 | 9 | 310 | 2.24e-11 | 63.9 |
| MsG0580025559.01.T01 | MTR_6g091800 | 22.924 | 301 | 187 | 7 | 13 | 279 | 16 | 305 | 1.59e-12 | 67.4 |
| MsG0580025559.01.T01 | MTR_8g068890 | 27.010 | 311 | 192 | 10 | 22 | 304 | 9 | 312 | 1.66e-12 | 67.4 |
| MsG0580025559.01.T01 | MTR_6g092210 | 25.000 | 256 | 175 | 7 | 55 | 304 | 2 | 246 | 1.94e-12 | 66.2 |
| MsG0580025559.01.T01 | MTR_2g032610 | 23.448 | 290 | 194 | 9 | 25 | 299 | 38 | 314 | 2.39e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_6g015860 | 25.000 | 284 | 182 | 10 | 31 | 298 | 32 | 300 | 2.59e-12 | 66.6 |
| MsG0580025559.01.T01 | MTR_7g068340 | 26.590 | 173 | 117 | 3 | 132 | 304 | 103 | 265 | 3.29e-12 | 67.0 |
| MsG0580025559.01.T01 | MTR_7g068340 | 24.014 | 279 | 183 | 9 | 32 | 305 | 103 | 357 | 7.69e-12 | 65.9 |
| MsG0580025559.01.T01 | MTR_8g036880 | 25.862 | 290 | 195 | 9 | 8 | 287 | 94 | 373 | 4.56e-12 | 66.6 |
| MsG0580025559.01.T01 | MTR_5g032420 | 24.299 | 321 | 195 | 9 | 22 | 304 | 9 | 319 | 4.60e-12 | 65.9 |
| MsG0580025559.01.T01 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 15 | 287 | 96 | 367 | 5.24e-12 | 66.2 |
| MsG0580025559.01.T01 | MTR_3g028590 | 26.502 | 283 | 187 | 9 | 15 | 287 | 92 | 363 | 5.47e-12 | 66.2 |
| MsG0580025559.01.T01 | MTR_8g086070 | 30.142 | 282 | 154 | 14 | 22 | 287 | 24 | 278 | 7.23e-12 | 65.5 |
| MsG0580025559.01.T01 | MTR_7g084400 | 27.083 | 192 | 124 | 3 | 114 | 302 | 205 | 383 | 8.06e-12 | 65.9 |
| MsG0580025559.01.T01 | MTR_5g081150 | 24.351 | 308 | 209 | 8 | 8 | 304 | 27 | 321 | 1.34e-11 | 64.7 |
| MsG0580025559.01.T01 | MTR_4g078545 | 25.939 | 293 | 197 | 10 | 15 | 298 | 74 | 355 | 3.42e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025559.01.T01 | AT5G46800 | 76.000 | 300 | 69 | 1 | 9 | 305 | 1 | 300 | 9.20e-171 | 475 |
| MsG0580025559.01.T01 | AT5G46800 | 76.000 | 300 | 69 | 1 | 9 | 305 | 1 | 300 | 9.20e-171 | 475 |
| MsG0580025559.01.T01 | AT5G46800 | 76.000 | 300 | 69 | 1 | 9 | 305 | 1 | 300 | 9.20e-171 | 475 |
| MsG0580025559.01.T01 | AT2G33820 | 35.762 | 302 | 174 | 7 | 14 | 305 | 16 | 307 | 4.09e-50 | 168 |
| MsG0580025559.01.T01 | AT2G33820 | 25.366 | 205 | 139 | 6 | 103 | 301 | 5 | 201 | 6.30e-12 | 65.5 |
| MsG0580025559.01.T01 | AT2G33820 | 34.839 | 310 | 174 | 8 | 14 | 305 | 16 | 315 | 3.55e-47 | 161 |
| MsG0580025559.01.T01 | AT1G79900 | 32.014 | 278 | 162 | 6 | 30 | 304 | 30 | 283 | 1.41e-37 | 135 |
| MsG0580025559.01.T01 | AT2G33820 | 34.000 | 250 | 144 | 7 | 14 | 251 | 16 | 256 | 4.39e-35 | 128 |
| MsG0580025559.01.T01 | AT2G33820 | 25.000 | 208 | 142 | 6 | 103 | 304 | 5 | 204 | 8.30e-12 | 64.7 |
| MsG0580025559.01.T01 | AT2G33820 | 35.526 | 228 | 129 | 6 | 88 | 305 | 7 | 226 | 3.24e-33 | 122 |
| MsG0580025559.01.T01 | AT4G01100 | 28.615 | 325 | 194 | 8 | 7 | 305 | 33 | 345 | 8.90e-30 | 116 |
| MsG0580025559.01.T01 | AT4G01100 | 29.333 | 300 | 174 | 8 | 32 | 305 | 8 | 295 | 2.44e-28 | 111 |
| MsG0580025559.01.T01 | AT4G01100 | 27.434 | 339 | 194 | 8 | 7 | 305 | 33 | 359 | 9.55e-28 | 110 |
| MsG0580025559.01.T01 | AT5G48970 | 27.692 | 325 | 189 | 10 | 15 | 304 | 21 | 334 | 5.42e-27 | 108 |
| MsG0580025559.01.T01 | AT1G25380 | 29.562 | 274 | 178 | 8 | 32 | 299 | 37 | 301 | 1.14e-25 | 105 |
| MsG0580025559.01.T01 | AT1G25380 | 29.562 | 274 | 178 | 8 | 32 | 299 | 37 | 301 | 1.14e-25 | 105 |
| MsG0580025559.01.T01 | AT5G58970 | 31.915 | 282 | 168 | 10 | 32 | 304 | 32 | 298 | 7.51e-24 | 99.4 |
| MsG0580025559.01.T01 | AT5G58970 | 28.500 | 200 | 126 | 5 | 9 | 205 | 111 | 296 | 3.34e-16 | 77.8 |
| MsG0580025559.01.T01 | AT5G58970 | 25.366 | 205 | 145 | 4 | 105 | 304 | 5 | 206 | 1.19e-14 | 73.6 |
| MsG0580025559.01.T01 | AT3G21390 | 25.786 | 318 | 193 | 6 | 15 | 299 | 18 | 325 | 3.42e-23 | 97.8 |
| MsG0580025559.01.T01 | AT3G21390 | 25.786 | 318 | 193 | 6 | 15 | 299 | 40 | 347 | 4.19e-23 | 98.2 |
| MsG0580025559.01.T01 | AT3G54110 | 31.541 | 279 | 167 | 10 | 32 | 301 | 31 | 294 | 1.12e-22 | 95.9 |
| MsG0580025559.01.T01 | AT3G54110 | 27.861 | 201 | 131 | 3 | 9 | 207 | 109 | 297 | 3.70e-17 | 80.5 |
| MsG0580025559.01.T01 | AT3G54110 | 28.500 | 200 | 134 | 4 | 110 | 304 | 9 | 204 | 1.79e-15 | 75.9 |
| MsG0580025559.01.T01 | AT5G66380 | 27.090 | 299 | 192 | 9 | 14 | 298 | 8 | 294 | 2.39e-22 | 95.1 |
| MsG0580025559.01.T01 | AT2G47490 | 27.076 | 277 | 189 | 7 | 32 | 304 | 33 | 300 | 5.18e-22 | 94.4 |
| MsG0580025559.01.T01 | AT4G11440 | 26.936 | 297 | 184 | 8 | 18 | 305 | 332 | 604 | 2.34e-21 | 94.7 |
| MsG0580025559.01.T01 | AT4G11440 | 26.936 | 297 | 184 | 8 | 18 | 305 | 332 | 604 | 2.34e-21 | 94.7 |
| MsG0580025559.01.T01 | AT1G14140 | 26.087 | 276 | 194 | 6 | 29 | 301 | 29 | 297 | 3.15e-21 | 92.0 |
| MsG0580025559.01.T01 | AT1G14140 | 33.152 | 184 | 107 | 7 | 125 | 301 | 28 | 202 | 5.86e-14 | 71.6 |
| MsG0580025559.01.T01 | AT5G01340 | 29.268 | 287 | 177 | 10 | 18 | 294 | 19 | 289 | 3.59e-20 | 89.4 |
| MsG0580025559.01.T01 | AT5G01340 | 30.114 | 176 | 113 | 4 | 27 | 199 | 123 | 291 | 1.82e-15 | 75.9 |
| MsG0580025559.01.T01 | AT5G48970 | 26.007 | 273 | 165 | 8 | 58 | 304 | 2 | 263 | 1.21e-19 | 87.0 |
| MsG0580025559.01.T01 | AT5G48970 | 25.243 | 206 | 134 | 5 | 16 | 207 | 64 | 263 | 8.88e-12 | 64.7 |
| MsG0580025559.01.T01 | AT2G37890 | 26.885 | 305 | 194 | 7 | 14 | 304 | 43 | 332 | 3.58e-19 | 86.7 |
| MsG0580025559.01.T01 | AT2G37890 | 28.444 | 225 | 134 | 8 | 2 | 212 | 126 | 337 | 1.10e-13 | 70.9 |
| MsG0580025559.01.T01 | AT1G14560 | 26.190 | 294 | 180 | 9 | 32 | 304 | 43 | 320 | 1.68e-18 | 84.7 |
| MsG0580025559.01.T01 | AT1G14560 | 25.728 | 206 | 133 | 7 | 15 | 207 | 122 | 320 | 9.77e-11 | 62.4 |
| MsG0580025559.01.T01 | AT5G61810 | 27.333 | 300 | 181 | 9 | 13 | 304 | 62 | 332 | 2.14e-18 | 84.7 |
| MsG0580025559.01.T01 | AT1G07030 | 28.283 | 297 | 181 | 10 | 16 | 302 | 40 | 314 | 2.70e-18 | 84.3 |
| MsG0580025559.01.T01 | AT4G32400 | 25.753 | 299 | 189 | 6 | 14 | 304 | 112 | 385 | 5.21e-18 | 84.0 |
| MsG0580025559.01.T01 | AT5G61810 | 27.517 | 298 | 183 | 9 | 13 | 304 | 205 | 475 | 8.79e-18 | 84.0 |
| MsG0580025559.01.T01 | AT1G34065 | 32.719 | 217 | 124 | 6 | 2 | 215 | 146 | 343 | 3.27e-17 | 81.3 |
| MsG0580025559.01.T01 | AT1G34065 | 30.928 | 194 | 98 | 5 | 111 | 301 | 77 | 237 | 2.19e-13 | 70.1 |
| MsG0580025559.01.T01 | AT1G34065 | 27.820 | 266 | 148 | 11 | 22 | 281 | 85 | 312 | 7.55e-12 | 65.5 |
| MsG0580025559.01.T01 | AT1G34065 | 32.719 | 217 | 124 | 6 | 2 | 215 | 139 | 336 | 3.43e-17 | 81.3 |
| MsG0580025559.01.T01 | AT1G34065 | 30.928 | 194 | 98 | 5 | 111 | 301 | 70 | 230 | 2.42e-13 | 70.1 |
| MsG0580025559.01.T01 | AT1G34065 | 27.820 | 266 | 148 | 11 | 22 | 281 | 78 | 305 | 8.01e-12 | 65.5 |
| MsG0580025559.01.T01 | AT5G42130 | 28.159 | 277 | 172 | 5 | 32 | 301 | 134 | 390 | 4.54e-17 | 81.3 |
| MsG0580025559.01.T01 | AT2G30160 | 27.152 | 302 | 181 | 10 | 16 | 302 | 42 | 319 | 1.01e-16 | 79.7 |
| MsG0580025559.01.T01 | AT3G55640 | 24.262 | 305 | 196 | 7 | 11 | 298 | 33 | 319 | 1.26e-16 | 79.3 |
| MsG0580025559.01.T01 | AT3G55640 | 27.979 | 193 | 126 | 6 | 15 | 206 | 144 | 324 | 1.52e-14 | 73.6 |
| MsG0580025559.01.T01 | AT3G55640 | 28.866 | 194 | 126 | 5 | 115 | 302 | 37 | 224 | 4.15e-12 | 66.2 |
| MsG0580025559.01.T01 | AT3G55640 | 24.262 | 305 | 196 | 7 | 11 | 298 | 33 | 319 | 1.26e-16 | 79.3 |
| MsG0580025559.01.T01 | AT3G55640 | 27.979 | 193 | 126 | 6 | 15 | 206 | 144 | 324 | 1.52e-14 | 73.6 |
| MsG0580025559.01.T01 | AT3G55640 | 28.866 | 194 | 126 | 5 | 115 | 302 | 37 | 224 | 4.15e-12 | 66.2 |
| MsG0580025559.01.T01 | AT1G74240 | 27.070 | 314 | 193 | 9 | 12 | 301 | 32 | 333 | 2.03e-16 | 79.3 |
| MsG0580025559.01.T01 | AT4G26180 | 25.321 | 312 | 193 | 11 | 13 | 304 | 18 | 309 | 1.38e-15 | 76.6 |
| MsG0580025559.01.T01 | AT1G74240 | 27.027 | 296 | 180 | 9 | 31 | 302 | 3 | 286 | 1.44e-15 | 76.3 |
| MsG0580025559.01.T01 | AT3G53940 | 25.938 | 320 | 204 | 10 | 2 | 304 | 57 | 360 | 1.88e-15 | 76.3 |
| MsG0580025559.01.T01 | AT3G53940 | 27.228 | 202 | 128 | 7 | 11 | 208 | 175 | 361 | 5.26e-14 | 72.0 |
| MsG0580025559.01.T01 | AT5G51050 | 26.460 | 291 | 190 | 7 | 18 | 304 | 225 | 495 | 1.94e-15 | 77.0 |
| MsG0580025559.01.T01 | AT1G14560 | 26.766 | 269 | 160 | 9 | 32 | 279 | 43 | 295 | 4.06e-15 | 74.7 |
| MsG0580025559.01.T01 | AT4G24570 | 27.445 | 317 | 181 | 11 | 22 | 304 | 9 | 310 | 5.67e-15 | 74.3 |
| MsG0580025559.01.T01 | AT4G24570 | 24.631 | 203 | 130 | 4 | 11 | 207 | 125 | 310 | 4.68e-11 | 63.2 |
| MsG0580025559.01.T01 | AT5G58970 | 25.366 | 205 | 145 | 4 | 105 | 304 | 5 | 206 | 8.67e-15 | 73.6 |
| MsG0580025559.01.T01 | AT5G58970 | 32.597 | 181 | 111 | 5 | 32 | 207 | 32 | 206 | 4.02e-14 | 71.6 |
| MsG0580025559.01.T01 | AT5G07320 | 24.460 | 278 | 181 | 8 | 32 | 305 | 225 | 477 | 3.63e-14 | 73.2 |
| MsG0580025559.01.T01 | AT4G39460 | 30.457 | 197 | 106 | 5 | 103 | 298 | 44 | 210 | 5.11e-14 | 72.0 |
| MsG0580025559.01.T01 | AT4G39460 | 29.329 | 283 | 145 | 11 | 11 | 281 | 49 | 288 | 1.44e-13 | 70.5 |
| MsG0580025559.01.T01 | AT4G39460 | 29.048 | 210 | 127 | 5 | 2 | 208 | 122 | 312 | 1.48e-11 | 64.7 |
| MsG0580025559.01.T01 | AT4G39460 | 30.457 | 197 | 106 | 5 | 103 | 298 | 44 | 210 | 5.11e-14 | 72.0 |
| MsG0580025559.01.T01 | AT4G39460 | 29.329 | 283 | 145 | 11 | 11 | 281 | 49 | 288 | 1.44e-13 | 70.5 |
| MsG0580025559.01.T01 | AT4G39460 | 29.048 | 210 | 127 | 5 | 2 | 208 | 122 | 312 | 1.48e-11 | 64.7 |
| MsG0580025559.01.T01 | AT4G39460 | 30.457 | 197 | 106 | 5 | 103 | 298 | 44 | 210 | 5.11e-14 | 72.0 |
| MsG0580025559.01.T01 | AT4G39460 | 29.329 | 283 | 145 | 11 | 11 | 281 | 49 | 288 | 1.44e-13 | 70.5 |
| MsG0580025559.01.T01 | AT4G39460 | 29.048 | 210 | 127 | 5 | 2 | 208 | 122 | 312 | 1.48e-11 | 64.7 |
| MsG0580025559.01.T01 | AT5G15640 | 24.211 | 285 | 185 | 9 | 31 | 298 | 36 | 306 | 1.79e-13 | 70.1 |
| MsG0580025559.01.T01 | AT5G15640 | 24.211 | 285 | 185 | 9 | 31 | 298 | 43 | 313 | 2.41e-13 | 69.7 |
| MsG0580025559.01.T01 | AT5G01500 | 25.547 | 274 | 183 | 7 | 29 | 301 | 132 | 385 | 4.20e-13 | 69.7 |
| MsG0580025559.01.T01 | AT5G13490 | 26.846 | 298 | 197 | 10 | 11 | 298 | 83 | 369 | 4.64e-13 | 69.3 |
| MsG0580025559.01.T01 | AT5G13490 | 26.846 | 298 | 197 | 10 | 11 | 298 | 83 | 369 | 4.64e-13 | 69.3 |
| MsG0580025559.01.T01 | AT1G14560 | 26.829 | 205 | 127 | 5 | 116 | 304 | 25 | 222 | 5.13e-13 | 67.8 |
| MsG0580025559.01.T01 | AT1G14560 | 25.728 | 206 | 133 | 7 | 15 | 207 | 24 | 222 | 3.66e-11 | 62.4 |
| MsG0580025559.01.T01 | AT5G56450 | 24.351 | 308 | 204 | 13 | 14 | 305 | 32 | 326 | 7.18e-13 | 68.6 |
| MsG0580025559.01.T01 | AT2G39970 | 25.574 | 305 | 184 | 13 | 28 | 298 | 20 | 315 | 7.79e-13 | 68.6 |
| MsG0580025559.01.T01 | AT4G26180 | 25.436 | 287 | 174 | 11 | 13 | 279 | 18 | 284 | 9.15e-13 | 67.8 |
| MsG0580025559.01.T01 | AT3G51870 | 24.188 | 277 | 183 | 9 | 29 | 301 | 104 | 357 | 1.46e-12 | 67.8 |
| MsG0580025559.01.T01 | AT3G55640 | 28.866 | 194 | 126 | 5 | 115 | 302 | 37 | 224 | 2.77e-12 | 65.9 |
| MsG0580025559.01.T01 | AT3G55640 | 28.866 | 194 | 126 | 5 | 115 | 302 | 37 | 224 | 2.77e-12 | 65.9 |
| MsG0580025559.01.T01 | AT5G64970 | 25.926 | 270 | 161 | 7 | 58 | 304 | 45 | 298 | 5.07e-12 | 65.9 |
| MsG0580025559.01.T01 | AT5G64970 | 26.199 | 271 | 159 | 8 | 58 | 304 | 169 | 422 | 1.04e-11 | 65.5 |
| MsG0580025559.01.T01 | AT5G17400 | 23.755 | 261 | 188 | 7 | 32 | 287 | 30 | 284 | 1.79e-11 | 64.3 |
| MsG0580025559.01.T01 | AT3G08580 | 25.436 | 287 | 194 | 9 | 11 | 287 | 79 | 355 | 1.82e-11 | 64.7 |
| MsG0580025559.01.T01 | AT3G08580 | 25.436 | 287 | 194 | 9 | 11 | 287 | 79 | 355 | 1.82e-11 | 64.7 |
| MsG0580025559.01.T01 | AT2G22500 | 27.225 | 191 | 107 | 7 | 29 | 206 | 136 | 307 | 4.38e-11 | 63.2 |
Find 89 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGTTCAATTGATGCTTTC+AGG | 0.065790 | 5:-20504009 | MsG0580025559.01.T01:CDS |
| TCGATTGCACCGGAATATTT+TGG | 0.161298 | 5:+20505441 | None:intergenic |
| GCTTTGGAGCTTGACCTTTA+TGG | 0.202406 | 5:+20505491 | None:intergenic |
| TGCCAATGCAGCATGTTTCT+TGG | 0.253985 | 5:-20503915 | MsG0580025559.01.T01:CDS |
| AAAGGTCTTTATAAAGGTTT+TGG | 0.282854 | 5:-20503962 | MsG0580025559.01.T01:CDS |
| AGAGGTTCTCTGATGCTTTC+CGG | 0.300203 | 5:-20504127 | MsG0580025559.01.T01:CDS |
| ATGCTTTCCGGAGGCTTGGC+TGG | 0.311514 | 5:-20504115 | MsG0580025559.01.T01:CDS |
| CCAAACATTGCGGCATTTCC+AGG | 0.322024 | 5:+20504208 | None:intergenic |
| AAATCAGAAGGTGGCGTAAA+AGG | 0.329776 | 5:-20504271 | MsG0580025559.01.T01:CDS |
| AAAGCTACTGAAGGGTTTAA+AGG | 0.332217 | 5:-20503980 | MsG0580025559.01.T01:CDS |
| GTTGTTTGTGGAGCTGCAGC+TGG | 0.347812 | 5:-20505249 | MsG0580025559.01.T01:CDS |
| GACCTTACTGCTGGAACTAT+TGG | 0.348951 | 5:-20505552 | MsG0580025559.01.T01:CDS |
| GGGTTTAAAGGTCTTTATAA+AGG | 0.355736 | 5:-20503968 | MsG0580025559.01.T01:CDS |
| GCGACATTGGCAGTGAAATA+TGG | 0.370723 | 5:-20504325 | MsG0580025559.01.T01:CDS |
| GAAGTGGTGTAGGCTGGCTT+TGG | 0.378224 | 5:+20505475 | None:intergenic |
| CAAGGGGTTAGTTCCCACTA+TGG | 0.403546 | 5:-20504242 | MsG0580025559.01.T01:CDS |
| TCAATTGAACCAGAAAACTT+TGG | 0.403615 | 5:+20504019 | None:intergenic |
| GCAACAAAGCAATTTATTGC+AGG | 0.410407 | 5:-20504175 | MsG0580025559.01.T01:CDS |
| GCTGTCCTGTTTACAGTTAG+AGG | 0.412677 | 5:-20505330 | MsG0580025559.01.T01:CDS |
| TTCAGTAGGGCAAGCTAGAA+AGG | 0.416209 | 5:+20505215 | None:intergenic |
| TCTGATGCTTTCCGGAGGCT+TGG | 0.423725 | 5:-20504119 | MsG0580025559.01.T01:CDS |
| GCCTACACCACTTCCTGGTC+AGG | 0.425760 | 5:-20505466 | MsG0580025559.01.T01:CDS |
| CCTGGAAATGCCGCAATGTT+TGG | 0.431845 | 5:-20504208 | MsG0580025559.01.T01:CDS |
| GGAACACTTCTGCACATTGC+AGG | 0.434706 | 5:+20503938 | None:intergenic |
| CAGAGTGCACTAGCTGGTTC+AGG | 0.437973 | 5:-20504352 | MsG0580025559.01.T01:CDS |
| GTTTACAGTTAGAGGGCAAA+TGG | 0.443517 | 5:-20505322 | MsG0580025559.01.T01:CDS |
| GGTCAGGTTCCAAAATATTC+CGG | 0.444777 | 5:-20505450 | MsG0580025559.01.T01:CDS |
| GAGATGACAAGATCAGCTTT+AGG | 0.446594 | 5:-20503887 | MsG0580025559.01.T01:CDS |
| TTAAATCAGCAGGTTGTTTG+TGG | 0.448036 | 5:-20505261 | MsG0580025559.01.T01:CDS |
| TTCTGATTTGAGAACATGTC+TGG | 0.450563 | 5:+20504285 | None:intergenic |
| TCATCCATTTGACACCATAA+AGG | 0.457483 | 5:-20505505 | MsG0580025559.01.T01:CDS |
| TTTGCCCTCTAACTGTAAAC+AGG | 0.465311 | 5:+20505325 | None:intergenic |
| AGCCAGCCTACACCACTTCC+TGG | 0.475356 | 5:-20505471 | MsG0580025559.01.T01:CDS |
| AAGAAACATGCTGCATTGGC+AGG | 0.482397 | 5:+20503917 | None:intergenic |
| AGGCGGATTATACAAAGGTA+TGG | 0.483651 | 5:-20505385 | MsG0580025559.01.T01:CDS |
| TGTAAACAGGACAGCGTTGA+AGG | 0.493527 | 5:+20505338 | None:intergenic |
| CTCCAATAGTTCCAGCAGTA+AGG | 0.497657 | 5:+20505550 | None:intergenic |
| AGGTATTTCACGTGCCATAG+TGG | 0.503932 | 5:+20504228 | None:intergenic |
| TGTTCTCACATTAAATCAGC+AGG | 0.508432 | 5:-20505271 | MsG0580025559.01.T01:CDS |
| GACCAGGAAGTGGTGTAGGC+TGG | 0.508905 | 5:+20505469 | None:intergenic |
| TTGACCTTTATGGTGTCAAA+TGG | 0.512260 | 5:+20505501 | None:intergenic |
| AGCAGCTCCAGCCAAGCCTC+CGG | 0.518143 | 5:+20504108 | None:intergenic |
| TGCCAAGAAACATGCTGCAT+TGG | 0.518948 | 5:+20503913 | None:intergenic |
| CTGCATTTGATAAGTTCAGT+AGG | 0.523172 | 5:+20505201 | None:intergenic |
| CTACTGAACTTATCAAATGC+AGG | 0.524614 | 5:-20505200 | MsG0580025559.01.T01:intron |
| ACAATAGCAGCTGAAGGTCC+AGG | 0.528414 | 5:-20505405 | MsG0580025559.01.T01:CDS |
| AGGAGGATAAAAGCTACTGA+AGG | 0.536760 | 5:-20503989 | MsG0580025559.01.T01:CDS |
| CTTACTGCTGGAACTATTGG+AGG | 0.538872 | 5:-20505549 | MsG0580025559.01.T01:CDS |
| ACACTCTTAATAACATCAGT+TGG | 0.538878 | 5:+20504067 | None:intergenic |
| ATACCTTTGTATAATCCGCC+TGG | 0.539426 | 5:+20505387 | None:intergenic |
| TTTGGAACCTGACCAGGAAG+TGG | 0.539639 | 5:+20505459 | None:intergenic |
| GGGGCTGCACAACTGATAGT+TGG | 0.548118 | 5:-20505528 | MsG0580025559.01.T01:CDS |
| GTGGCCAAGGACCTTACTGC+TGG | 0.553962 | 5:-20505561 | MsG0580025559.01.T01:CDS |
| AGTTCCAGCAGTAAGGTCCT+TGG | 0.558427 | 5:+20505557 | None:intergenic |
| CTTGACAGCATCGATTGCAC+CGG | 0.564222 | 5:+20505431 | None:intergenic |
| TCAGATGGGAGATGTGGCCA+AGG | 0.568658 | 5:-20505574 | MsG0580025559.01.T01:CDS |
| GCATTGTTGAGGTCACGTCC+TGG | 0.570177 | 5:-20505297 | MsG0580025559.01.T01:CDS |
| GGCGGATTATACAAAGGTAT+GGG | 0.572752 | 5:-20505384 | MsG0580025559.01.T01:CDS |
| CTGTCCTGTTTACAGTTAGA+GGG | 0.573760 | 5:-20505329 | MsG0580025559.01.T01:CDS |
| GATACCTCTGAACTCGGTAG+AGG | 0.574095 | 5:-20504145 | MsG0580025559.01.T01:CDS |
| ACTATGGCACGTGAAATACC+TGG | 0.576915 | 5:-20504226 | MsG0580025559.01.T01:CDS |
| TGCATTTGATAAGTTCAGTA+GGG | 0.581238 | 5:+20505202 | None:intergenic |
| TGGTTCAGGAACAGCGACAT+TGG | 0.587503 | 5:-20504338 | MsG0580025559.01.T01:CDS |
| GGAGGATAAAAGCTACTGAA+GGG | 0.589896 | 5:-20503988 | MsG0580025559.01.T01:CDS |
| TTACTGCTGGAACTATTGGA+GGG | 0.592280 | 5:-20505548 | MsG0580025559.01.T01:CDS |
| CAAGCACAGAGTGCACTAGC+TGG | 0.592319 | 5:-20504358 | MsG0580025559.01.T01:CDS |
| ACATGTCTGGCTACATCCAT+CGG | 0.595686 | 5:+20504298 | None:intergenic |
| GGCAGCTACTGTAGCAAGTG+GGG | 0.596829 | 5:+20505359 | None:intergenic |
| AGGCAGCTACTGTAGCAAGT+GGG | 0.597776 | 5:+20505358 | None:intergenic |
| GGTATTTCACGTGCCATAGT+GGG | 0.600380 | 5:+20504229 | None:intergenic |
| TCTACCGAGTTCAGAGGTAT+CGG | 0.601498 | 5:+20504147 | None:intergenic |
| AAGGCAGCTACTGTAGCAAG+TGG | 0.605947 | 5:+20505357 | None:intergenic |
| TTTAATGTGAGAACATCGCC+AGG | 0.605951 | 5:+20505279 | None:intergenic |
| TTCATATACACCAAACATTG+CGG | 0.607181 | 5:+20504198 | None:intergenic |
| ACAAAGCAATTTATTGCAGG+AGG | 0.612226 | 5:-20504172 | MsG0580025559.01.T01:CDS |
| AGACATGTTCTCAAATCAGA+AGG | 0.616745 | 5:-20504283 | MsG0580025559.01.T01:CDS |
| TACTGCTGGAACTATTGGAG+GGG | 0.621226 | 5:-20505547 | MsG0580025559.01.T01:CDS |
| GGCAAATGGAAGCATTGTTG+AGG | 0.625965 | 5:-20505308 | MsG0580025559.01.T01:CDS |
| AAGAAGACAATAGCAGCTGA+AGG | 0.629491 | 5:-20505411 | MsG0580025559.01.T01:CDS |
| GTTCAATTGATGCTTTCAGG+AGG | 0.640152 | 5:-20504006 | MsG0580025559.01.T01:CDS |
| AGAACCTCTACCGAGTTCAG+AGG | 0.650113 | 5:+20504141 | None:intergenic |
| CATGTTCTCAAATCAGAAGG+TGG | 0.651093 | 5:-20504280 | MsG0580025559.01.T01:CDS |
| ACATTGGCAGTGAAATATGG+TGG | 0.655537 | 5:-20504322 | MsG0580025559.01.T01:CDS |
| GGCACCGATACCTCTGAACT+CGG | 0.657541 | 5:-20504151 | MsG0580025559.01.T01:CDS |
| AGTGAAATATGGTGGACCGA+TGG | 0.673760 | 5:-20504314 | MsG0580025559.01.T01:CDS |
| ACCTGACCAGGAAGTGGTGT+AGG | 0.676152 | 5:+20505465 | None:intergenic |
| GGTTCTCTGATGCTTTCCGG+AGG | 0.681688 | 5:-20504124 | MsG0580025559.01.T01:CDS |
| GGTCCAGGCGGATTATACAA+AGG | 0.698858 | 5:-20505390 | MsG0580025559.01.T01:CDS |
| ATAGCAGCTGAAGGTCCAGG+CGG | 0.759826 | 5:-20505402 | MsG0580025559.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTTCATGATTTAC+TGG | - | Chr5:20504323-20504342 | MsG0580025559.01.T01:CDS | 15.0% |
| !! | ATAATGTGAAAAGTAAATTC+AGG | + | Chr5:20505022-20505041 | None:intergenic | 20.0% |
| ! | AAATGTAATCATTTCTCTCA+TGG | - | Chr5:20504911-20504930 | MsG0580025559.01.T01:intron | 25.0% |
| ! | CAGATAACAAGAATATACAA+AGG | + | Chr5:20504438-20504457 | None:intergenic | 25.0% |
| ! | CTTTCTATTATTCAAGCTTA+GGG | - | Chr5:20504671-20504690 | MsG0580025559.01.T01:intron | 25.0% |
| ! | TCTTTCTATTATTCAAGCTT+AGG | - | Chr5:20504670-20504689 | MsG0580025559.01.T01:intron | 25.0% |
| ! | TGTTCTAACAATATCTCTAT+GGG | + | Chr5:20504543-20504562 | None:intergenic | 25.0% |
| !! | AAAGGTCTTTATAAAGGTTT+TGG | - | Chr5:20505515-20505534 | MsG0580025559.01.T01:CDS | 25.0% |
| !! | CTCATAATTTACTGATTAGT+GGG | + | Chr5:20504746-20504765 | None:intergenic | 25.0% |
| !! | TACAAAAATCCAAAGTTTTC+TGG | - | Chr5:20505449-20505468 | MsG0580025559.01.T01:CDS | 25.0% |
| !!! | ACAAAAACTGTTTTTTCAGA+TGG | - | Chr5:20503888-20503907 | MsG0580025559.01.T01:CDS | 25.0% |
| !!! | CAAAAACTGTTTTTTCAGAT+GGG | - | Chr5:20503889-20503908 | MsG0580025559.01.T01:CDS | 25.0% |
| AATCTCTGATTCATCTCTTT+AGG | - | Chr5:20504874-20504893 | MsG0580025559.01.T01:intron | 30.0% | |
| ACACTCTTAATAACATCAGT+TGG | + | Chr5:20505413-20505432 | None:intergenic | 30.0% | |
| ATCTCTGATTCATCTCTTTA+GGG | - | Chr5:20504875-20504894 | MsG0580025559.01.T01:intron | 30.0% | |
| ATTAAAAACACCATCATCTG+TGG | + | Chr5:20504310-20504329 | None:intergenic | 30.0% | |
| CTAGAAAGTTATTACATGAC+AGG | + | Chr5:20504405-20504424 | None:intergenic | 30.0% | |
| CTGTTCTAACAATATCTCTA+TGG | + | Chr5:20504544-20504563 | None:intergenic | 30.0% | |
| GGGTTTAAAGGTCTTTATAA+AGG | - | Chr5:20505509-20505528 | MsG0580025559.01.T01:CDS | 30.0% | |
| TCAATTGAACCAGAAAACTT+TGG | + | Chr5:20505461-20505480 | None:intergenic | 30.0% | |
| TGCATTTGATAAGTTCAGTA+GGG | + | Chr5:20504278-20504297 | None:intergenic | 30.0% | |
| TTCATATACACCAAACATTG+CGG | + | Chr5:20505282-20505301 | None:intergenic | 30.0% | |
| TTTGTTACATGATGAATACC+AGG | - | Chr5:20505093-20505112 | MsG0580025559.01.T01:intron | 30.0% | |
| ! | GATTACTAGTATCTGAGATT+AGG | + | Chr5:20504858-20504877 | None:intergenic | 30.0% |
| ! | GCTCATAATTTACTGATTAG+TGG | + | Chr5:20504747-20504766 | None:intergenic | 30.0% |
| !!! | CTTTTATTGATTTCGAACCA+GGG | + | Chr5:20504570-20504589 | None:intergenic | 30.0% |
| !!! | TCTTTTATTGATTTCGAACC+AGG | + | Chr5:20504571-20504590 | None:intergenic | 30.0% |
| AAAGCTACTGAAGGGTTTAA+AGG | - | Chr5:20505497-20505516 | MsG0580025559.01.T01:CDS | 35.0% | |
| ACAAAGCAATTTATTGCAGG+AGG | - | Chr5:20505305-20505324 | MsG0580025559.01.T01:CDS | 35.0% | |
| AGACATGTTCTCAAATCAGA+AGG | - | Chr5:20505194-20505213 | MsG0580025559.01.T01:intron | 35.0% | |
| ATCTAATGCATGGACAAATG+CGG | + | Chr5:20504485-20504504 | None:intergenic | 35.0% | |
| CTACTGAACTTATCAAATGC+AGG | - | Chr5:20504277-20504296 | MsG0580025559.01.T01:CDS | 35.0% | |
| CTGCATTTGATAAGTTCAGT+AGG | + | Chr5:20504279-20504298 | None:intergenic | 35.0% | |
| GAAGACACGATATTTGATCA+CGG | - | Chr5:20504610-20504629 | MsG0580025559.01.T01:intron | 35.0% | |
| GCAACAAAGCAATTTATTGC+AGG | - | Chr5:20505302-20505321 | MsG0580025559.01.T01:CDS | 35.0% | |
| GGTTAACATGATTTCTCTCA+TGG | - | Chr5:20504932-20504951 | MsG0580025559.01.T01:intron | 35.0% | |
| TCATCCATTTGACACCATAA+AGG | - | Chr5:20503972-20503991 | MsG0580025559.01.T01:CDS | 35.0% | |
| TCTCTGATTCATCTCTTTAG+GGG | - | Chr5:20504876-20504895 | MsG0580025559.01.T01:intron | 35.0% | |
| TGTTCTCACATTAAATCAGC+AGG | - | Chr5:20504206-20504225 | MsG0580025559.01.T01:CDS | 35.0% | |
| TTAAATCAGCAGGTTGTTTG+TGG | - | Chr5:20504216-20504235 | MsG0580025559.01.T01:CDS | 35.0% | |
| TTTGACCATCTGTATCTGTT+GGG | + | Chr5:20504774-20504793 | None:intergenic | 35.0% | |
| ! | TAATTTACTGATTAGTGGGC+AGG | + | Chr5:20504742-20504761 | None:intergenic | 35.0% |
| ! | TTCTGATTTGAGAACATGTC+TGG | + | Chr5:20505195-20505214 | None:intergenic | 35.0% |
| ! | TTGACCTTTATGGTGTCAAA+TGG | + | Chr5:20503979-20503998 | None:intergenic | 35.0% |
| AAATCAGAAGGTGGCGTAAA+AGG | - | Chr5:20505206-20505225 | MsG0580025559.01.T01:CDS | 40.0% | |
| AAGAAGACAATAGCAGCTGA+AGG | - | Chr5:20504066-20504085 | MsG0580025559.01.T01:CDS | 40.0% | |
| ACATTGGCAGTGAAATATGG+TGG | - | Chr5:20505155-20505174 | MsG0580025559.01.T01:intron | 40.0% | |
| ACCAGTCTTTACTCTTCACA+AGG | - | Chr5:20504793-20504812 | MsG0580025559.01.T01:intron | 40.0% | |
| ACCTTGTGAAGAGTAAAGAC+TGG | + | Chr5:20504797-20504816 | None:intergenic | 40.0% | |
| AGGAGGATAAAAGCTACTGA+AGG | - | Chr5:20505488-20505507 | MsG0580025559.01.T01:CDS | 40.0% | |
| ATACCTTTGTATAATCCGCC+TGG | + | Chr5:20504093-20504112 | None:intergenic | 40.0% | |
| CATGTTCTCAAATCAGAAGG+TGG | - | Chr5:20505197-20505216 | MsG0580025559.01.T01:intron | 40.0% | |
| CTGGTTCAATTGATGCTTTC+AGG | - | Chr5:20505468-20505487 | MsG0580025559.01.T01:CDS | 40.0% | |
| CTGTCCTGTTTACAGTTAGA+GGG | - | Chr5:20504148-20504167 | MsG0580025559.01.T01:CDS | 40.0% | |
| GAGATGACAAGATCAGCTTT+AGG | - | Chr5:20505590-20505609 | MsG0580025559.01.T01:CDS | 40.0% | |
| GCAAGTCAGAGTTATTCTCA+TGG | + | Chr5:20504977-20504996 | None:intergenic | 40.0% | |
| GGAGGATAAAAGCTACTGAA+GGG | - | Chr5:20505489-20505508 | MsG0580025559.01.T01:CDS | 40.0% | |
| GGTCAGGTTCCAAAATATTC+CGG | - | Chr5:20504027-20504046 | MsG0580025559.01.T01:CDS | 40.0% | |
| GTTCAATTGATGCTTTCAGG+AGG | - | Chr5:20505471-20505490 | MsG0580025559.01.T01:CDS | 40.0% | |
| GTTTACAGTTAGAGGGCAAA+TGG | - | Chr5:20504155-20504174 | MsG0580025559.01.T01:CDS | 40.0% | |
| GTTTGACCATCTGTATCTGT+TGG | + | Chr5:20504775-20504794 | None:intergenic | 40.0% | |
| TCTAATGCATGGACAAATGC+GGG | + | Chr5:20504484-20504503 | None:intergenic | 40.0% | |
| TTACTGCTGGAACTATTGGA+GGG | - | Chr5:20503929-20503948 | MsG0580025559.01.T01:CDS | 40.0% | |
| TTTAATGTGAGAACATCGCC+AGG | + | Chr5:20504201-20504220 | None:intergenic | 40.0% | |
| TTTGCCCTCTAACTGTAAAC+AGG | + | Chr5:20504155-20504174 | None:intergenic | 40.0% | |
| ! | GGCGTAAAAGGTCTTTTCAA+GGG | - | Chr5:20505218-20505237 | MsG0580025559.01.T01:CDS | 40.0% |
| ! | GTCTAAGACGTATGCATGAT+TGG | + | Chr5:20504643-20504662 | None:intergenic | 40.0% |
| ! | TCGATTGCACCGGAATATTT+TGG | + | Chr5:20504039-20504058 | None:intergenic | 40.0% |
| ! | TGGCGTAAAAGGTCTTTTCA+AGG | - | Chr5:20505217-20505236 | MsG0580025559.01.T01:CDS | 40.0% |
| !! | AGGCGGATTATACAAAGGTA+TGG | - | Chr5:20504092-20504111 | MsG0580025559.01.T01:CDS | 40.0% |
| !! | CTCTTTAGGGGCTCATTTTA+AGG | - | Chr5:20504888-20504907 | MsG0580025559.01.T01:intron | 40.0% |
| !! | GCGTAAAAGGTCTTTTCAAG+GGG | - | Chr5:20505219-20505238 | MsG0580025559.01.T01:CDS | 40.0% |
| !! | GGCGGATTATACAAAGGTAT+GGG | - | Chr5:20504093-20504112 | MsG0580025559.01.T01:CDS | 40.0% |
| !! | TTATTGATTTCGAACCAGGG+TGG | + | Chr5:20504567-20504586 | None:intergenic | 40.0% |
| !!! | GAATATTTTGGAACCTGACC+AGG | + | Chr5:20504027-20504046 | None:intergenic | 40.0% |
| !!! | GTTTTTTCAGATGGGAGATG+TGG | - | Chr5:20503897-20503916 | MsG0580025559.01.T01:CDS | 40.0% |
| !!! | TGGAGCTGCTTTTTGGTTTA+TGG | - | Chr5:20505382-20505401 | MsG0580025559.01.T01:CDS | 40.0% |
| ACACTGGGACATCTAATGCA+TGG | + | Chr5:20504495-20504514 | None:intergenic | 45.0% | |
| ACATGTCTGGCTACATCCAT+CGG | + | Chr5:20505182-20505201 | None:intergenic | 45.0% | |
| ACTATGGCACGTGAAATACC+TGG | - | Chr5:20505251-20505270 | MsG0580025559.01.T01:CDS | 45.0% | |
| AGAGGTTCTCTGATGCTTTC+CGG | - | Chr5:20505350-20505369 | MsG0580025559.01.T01:CDS | 45.0% | |
| AGGTATTTCACGTGCCATAG+TGG | + | Chr5:20505252-20505271 | None:intergenic | 45.0% | |
| AGGTTAGATGCCACAGATGA+TGG | - | Chr5:20504297-20504316 | MsG0580025559.01.T01:CDS | 45.0% | |
| CCATACCCAACAGATACAGA+TGG | - | Chr5:20504766-20504785 | MsG0580025559.01.T01:intron | 45.0% | |
| CCATCTGTATCTGTTGGGTA+TGG | + | Chr5:20504769-20504788 | None:intergenic | 45.0% | |
| CTCCAATAGTTCCAGCAGTA+AGG | + | Chr5:20503930-20503949 | None:intergenic | 45.0% | |
| CTTACTGCTGGAACTATTGG+AGG | - | Chr5:20503928-20503947 | MsG0580025559.01.T01:CDS | 45.0% | |
| GACCTTACTGCTGGAACTAT+TGG | - | Chr5:20503925-20503944 | MsG0580025559.01.T01:CDS | 45.0% | |
| GCGACATTGGCAGTGAAATA+TGG | - | Chr5:20505152-20505171 | MsG0580025559.01.T01:intron | 45.0% | |
| GCTGTCCTGTTTACAGTTAG+AGG | - | Chr5:20504147-20504166 | MsG0580025559.01.T01:CDS | 45.0% | |
| GGTATTTCACGTGCCATAGT+GGG | + | Chr5:20505251-20505270 | None:intergenic | 45.0% | |
| TACATTCCTGACCACTTGGA+CGG | - | Chr5:20504820-20504839 | MsG0580025559.01.T01:intron | 45.0% | |
| TACTGCTGGAACTATTGGAG+GGG | - | Chr5:20503930-20503949 | MsG0580025559.01.T01:CDS | 45.0% | |
| TATTGTTAGAACAGCCACCC+TGG | - | Chr5:20504550-20504569 | MsG0580025559.01.T01:intron | 45.0% | |
| TGCCAAGAAACATGCTGCAT+TGG | + | Chr5:20505567-20505586 | None:intergenic | 45.0% | |
| TGCCAATGCAGCATGTTTCT+TGG | - | Chr5:20505562-20505581 | MsG0580025559.01.T01:CDS | 45.0% | |
| TGTGTACATTCCTGACCACT+TGG | - | Chr5:20504816-20504835 | MsG0580025559.01.T01:intron | 45.0% | |
| TTCAGTAGGGCAAGCTAGAA+AGG | + | Chr5:20504265-20504284 | None:intergenic | 45.0% | |
| ! | AAGAAACATGCTGCATTGGC+AGG | + | Chr5:20505563-20505582 | None:intergenic | 45.0% |
| ! | TCTACCGAGTTCAGAGGTAT+CGG | + | Chr5:20505333-20505352 | None:intergenic | 45.0% |
| ! | TGTAAACAGGACAGCGTTGA+AGG | + | Chr5:20504142-20504161 | None:intergenic | 45.0% |
| !! | AGTGAAATATGGTGGACCGA+TGG | - | Chr5:20505163-20505182 | MsG0580025559.01.T01:intron | 45.0% |
| !! | GCTTTGGAGCTTGACCTTTA+TGG | + | Chr5:20503989-20504008 | None:intergenic | 45.0% |
| !! | GGCAAATGGAAGCATTGTTG+AGG | - | Chr5:20504169-20504188 | MsG0580025559.01.T01:CDS | 45.0% |
| AAGGCAGCTACTGTAGCAAG+TGG | + | Chr5:20504123-20504142 | None:intergenic | 50.0% | |
| AATGCATGGACAAATGCGGG+TGG | + | Chr5:20504481-20504500 | None:intergenic | 50.0% | |
| ACAATAGCAGCTGAAGGTCC+AGG | - | Chr5:20504072-20504091 | MsG0580025559.01.T01:CDS | 50.0% | |
| AGAACCTCTACCGAGTTCAG+AGG | + | Chr5:20505339-20505358 | None:intergenic | 50.0% | |
| AGGCAGCTACTGTAGCAAGT+GGG | + | Chr5:20504122-20504141 | None:intergenic | 50.0% | |
| AGTTCCAGCAGTAAGGTCCT+TGG | + | Chr5:20503923-20503942 | None:intergenic | 50.0% | |
| CACTTGGACGGAGTAGAGTT+AGG | - | Chr5:20504832-20504851 | MsG0580025559.01.T01:intron | 50.0% | |
| CCAAACATTGCGGCATTTCC+AGG | + | Chr5:20505272-20505291 | None:intergenic | 50.0% | |
| CCTGGAAATGCCGCAATGTT+TGG | - | Chr5:20505269-20505288 | MsG0580025559.01.T01:CDS | 50.0% | |
| CTAACTCTACTCCGTCCAAG+TGG | + | Chr5:20504834-20504853 | None:intergenic | 50.0% | |
| GATACCTCTGAACTCGGTAG+AGG | - | Chr5:20505332-20505351 | MsG0580025559.01.T01:CDS | 50.0% | |
| GGAACACTTCTGCACATTGC+AGG | + | Chr5:20505542-20505561 | None:intergenic | 50.0% | |
| TGCACTCTGTGCTTGTAACC+TGG | + | Chr5:20505114-20505133 | None:intergenic | 50.0% | |
| TGGTTCAGGAACAGCGACAT+TGG | - | Chr5:20505139-20505158 | MsG0580025559.01.T01:intron | 50.0% | |
| ! | TTTGGAACCTGACCAGGAAG+TGG | + | Chr5:20504021-20504040 | None:intergenic | 50.0% |
| !! | CAAGGGGTTAGTTCCCACTA+TGG | - | Chr5:20505235-20505254 | MsG0580025559.01.T01:CDS | 50.0% |
| !! | CTTGACAGCATCGATTGCAC+CGG | + | Chr5:20504049-20504068 | None:intergenic | 50.0% |
| !! | GGTCCAGGCGGATTATACAA+AGG | - | Chr5:20504087-20504106 | MsG0580025559.01.T01:CDS | 50.0% |
| ACCTCTCACGCAGACACACT+GGG | + | Chr5:20504510-20504529 | None:intergenic | 55.0% | |
| ACCTGACCAGGAAGTGGTGT+AGG | + | Chr5:20504015-20504034 | None:intergenic | 55.0% | |
| ATAGCAGCTGAAGGTCCAGG+CGG | - | Chr5:20504075-20504094 | MsG0580025559.01.T01:CDS | 55.0% | |
| CAAGCACAGAGTGCACTAGC+TGG | - | Chr5:20505119-20505138 | MsG0580025559.01.T01:intron | 55.0% | |
| GCATTGTTGAGGTCACGTCC+TGG | - | Chr5:20504180-20504199 | MsG0580025559.01.T01:CDS | 55.0% | |
| GGCAGCTACTGTAGCAAGTG+GGG | + | Chr5:20504121-20504140 | None:intergenic | 55.0% | |
| GGGGCTGCACAACTGATAGT+TGG | - | Chr5:20503949-20503968 | MsG0580025559.01.T01:CDS | 55.0% | |
| GGTTCTCTGATGCTTTCCGG+AGG | - | Chr5:20505353-20505372 | MsG0580025559.01.T01:CDS | 55.0% | |
| GTTGTTTGTGGAGCTGCAGC+TGG | - | Chr5:20504228-20504247 | MsG0580025559.01.T01:CDS | 55.0% | |
| TCAGATGGGAGATGTGGCCA+AGG | - | Chr5:20503903-20503922 | MsG0580025559.01.T01:CDS | 55.0% | |
| TCTACTCCGTCCAAGTGGTC+AGG | + | Chr5:20504829-20504848 | None:intergenic | 55.0% | |
| TCTGATGCTTTCCGGAGGCT+TGG | - | Chr5:20505358-20505377 | MsG0580025559.01.T01:CDS | 55.0% | |
| ! | CAGAGTGCACTAGCTGGTTC+AGG | - | Chr5:20505125-20505144 | MsG0580025559.01.T01:intron | 55.0% |
| !! | GAAGTGGTGTAGGCTGGCTT+TGG | + | Chr5:20504005-20504024 | None:intergenic | 55.0% |
| !! | GGCACCGATACCTCTGAACT+CGG | - | Chr5:20505326-20505345 | MsG0580025559.01.T01:CDS | 55.0% |
| !!! | GCTTGGCTGGAGCTGCTTTT+TGG | - | Chr5:20505375-20505394 | MsG0580025559.01.T01:CDS | 55.0% |
| AGCCAGCCTACACCACTTCC+TGG | - | Chr5:20504006-20504025 | MsG0580025559.01.T01:CDS | 60.0% | |
| AGTGGGCAGGTCGATCGTGT+GGG | + | Chr5:20504729-20504748 | None:intergenic | 60.0% | |
| ATGCTTTCCGGAGGCTTGGC+TGG | - | Chr5:20505362-20505381 | MsG0580025559.01.T01:CDS | 60.0% | |
| CACCTCTCACGCAGACACAC+TGG | + | Chr5:20504511-20504530 | None:intergenic | 60.0% | |
| GACCAGGAAGTGGTGTAGGC+TGG | + | Chr5:20504011-20504030 | None:intergenic | 60.0% | |
| GCCTACACCACTTCCTGGTC+AGG | - | Chr5:20504011-20504030 | MsG0580025559.01.T01:CDS | 60.0% | |
| GTGGCCAAGGACCTTACTGC+TGG | - | Chr5:20503916-20503935 | MsG0580025559.01.T01:CDS | 60.0% | |
| TCCCAGTGTGTCTGCGTGAG+AGG | - | Chr5:20504506-20504525 | MsG0580025559.01.T01:intron | 60.0% | |
| ! | TAGTGGGCAGGTCGATCGTG+TGG | + | Chr5:20504730-20504749 | None:intergenic | 60.0% |
| AGCAGCTCCAGCCAAGCCTC+CGG | + | Chr5:20505372-20505391 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 20503883 | 20505616 | 20503883 | ID=MsG0580025559.01;Name=MsG0580025559.01 |
| Chr5 | mRNA | 20503883 | 20505616 | 20503883 | ID=MsG0580025559.01.T01;Parent=MsG0580025559.01;Name=MsG0580025559.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|305 |
| Chr5 | exon | 20505201 | 20505616 | 20505201 | ID=MsG0580025559.01.T01:exon:8949;Parent=MsG0580025559.01.T01 |
| Chr5 | exon | 20503883 | 20504384 | 20503883 | ID=MsG0580025559.01.T01:exon:8948;Parent=MsG0580025559.01.T01 |
| Chr5 | CDS | 20505201 | 20505616 | 20505201 | ID=MsG0580025559.01.T01:cds;Parent=MsG0580025559.01.T01 |
| Chr5 | CDS | 20503883 | 20504384 | 20503883 | ID=MsG0580025559.01.T01:cds;Parent=MsG0580025559.01.T01 |
| Gene Sequence |
| Protein sequence |
