Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011322.01.T01 | RHN76407.1 | 95.96 | 297 | 12 | 0 | 1 | 297 | 140 | 436 | 0 | 563 |
| MsG0280011322.01.T01 | RHN76407.1 | 92.537 | 67 | 5 | 0 | 216 | 282 | 17 | 83 | 1.08E-30 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011322.01.T01 | Q9CA93 | 61.409 | 298 | 102 | 4 | 1 | 297 | 1 | 286 | 4.94E-114 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011322.01.T01 | A0A396JMZ9 | 95.960 | 297 | 12 | 0 | 1 | 297 | 140 | 436 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048896.01 | MsG0280011322.01 | 0.801964 | 7.022533e-49 | 3.398527e-46 |
| MsG0180003114.01 | MsG0280011322.01 | 0.813845 | 2.082854e-51 | 1.375234e-48 |
| MsG0180004852.01 | MsG0280011322.01 | 0.823053 | 1.703383e-53 | 1.450934e-50 |
| MsG0180005806.01 | MsG0280011322.01 | 0.806596 | 7.619765e-50 | 4.152389e-47 |
| MsG0280006451.01 | MsG0280011322.01 | 0.806408 | 8.344752e-50 | 4.525769e-47 |
| MsG0280011322.01 | MsG0380012527.01 | 0.814980 | 1.168778e-51 | 7.957817e-49 |
| MsG0280011322.01 | MsG0380014719.01 | 0.802764 | 4.805965e-49 | 2.373917e-46 |
| MsG0280011322.01 | MsG0380017472.01 | 0.800909 | 1.155447e-48 | 5.444958e-46 |
| MsG0280011322.01 | MsG0380017474.01 | 0.802917 | 4.468098e-49 | 2.215599e-46 |
| MsG0280011322.01 | MsG0380017647.01 | 0.812995 | 3.202466e-51 | 2.066346e-48 |
| MsG0280011322.01 | MsG0480018196.01 | 0.806071 | 9.826331e-50 | 5.283860e-47 |
| MsG0280011322.01 | MsG0480021039.01 | 0.804281 | 2.328661e-49 | 1.195826e-46 |
| MsG0280011322.01 | MsG0480021317.01 | 0.807938 | 3.958049e-50 | 2.233451e-47 |
| MsG0280011322.01 | MsG0580025447.01 | 0.801420 | 9.079426e-49 | 4.334039e-46 |
| MsG0280011322.01 | MsG0580027750.01 | 0.802672 | 5.019796e-49 | 2.473625e-46 |
| MsG0280011322.01 | MsG0680030878.01 | 0.800834 | 1.196422e-48 | 5.627189e-46 |
| MsG0280011322.01 | MsG0680034040.01 | 0.847985 | 8.178073e-60 | 1.478984e-56 |
| MsG0280011322.01 | MsG0680034419.01 | 0.802806 | 4.709617e-49 | 2.328890e-46 |
| MsG0280011322.01 | MsG0780038337.01 | 0.807363 | 5.242649e-50 | 2.914337e-47 |
| MsG0280011322.01 | MsG0780038341.01 | 0.831404 | 1.702205e-55 | 1.845223e-52 |
| MsG0280011322.01 | MsG0780041640.01 | 0.814805 | 1.277443e-51 | 8.657029e-49 |
| MsG0280011322.01 | MsG0880046040.01 | 0.813711 | 2.228931e-51 | 1.466470e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0280011322.01 | MsG0880045188.01 | PPI |
| MsG0580025559.01 | MsG0280011322.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011322.01.T01 | MTR_2g102010 | 95.960 | 297 | 12 | 0 | 1 | 297 | 1 | 297 | 0.0 | 561 |
| MsG0280011322.01.T01 | MTR_4g012850 | 62.416 | 298 | 108 | 4 | 1 | 297 | 1 | 295 | 1.27e-135 | 386 |
| MsG0280011322.01.T01 | MTR_8g066975 | 37.000 | 300 | 170 | 6 | 10 | 294 | 1 | 296 | 1.87e-47 | 161 |
| MsG0280011322.01.T01 | MTR_5g030530 | 35.333 | 300 | 175 | 6 | 10 | 294 | 1 | 296 | 3.50e-45 | 155 |
| MsG0280011322.01.T01 | MTR_4g088545 | 28.328 | 293 | 195 | 5 | 15 | 294 | 10 | 300 | 2.35e-30 | 116 |
| MsG0280011322.01.T01 | MTR_4g088545 | 29.237 | 236 | 153 | 4 | 15 | 237 | 10 | 244 | 1.42e-25 | 102 |
| MsG0280011322.01.T01 | MTR_4g088545 | 29.508 | 183 | 121 | 3 | 111 | 288 | 13 | 192 | 6.93e-18 | 82.0 |
| MsG0280011322.01.T01 | MTR_1g097890 | 32.296 | 257 | 150 | 7 | 18 | 274 | 52 | 284 | 1.98e-25 | 103 |
| MsG0280011322.01.T01 | MTR_8g096050 | 28.520 | 277 | 190 | 4 | 15 | 288 | 225 | 496 | 2.35e-25 | 105 |
| MsG0280011322.01.T01 | MTR_8g096050 | 28.571 | 196 | 123 | 7 | 10 | 196 | 315 | 502 | 6.27e-14 | 72.0 |
| MsG0280011322.01.T01 | MTR_4g088545 | 29.319 | 191 | 126 | 3 | 15 | 197 | 10 | 199 | 2.55e-24 | 99.0 |
| MsG0280011322.01.T01 | MTR_4g088545 | 29.508 | 183 | 121 | 3 | 111 | 288 | 13 | 192 | 4.02e-18 | 82.0 |
| MsG0280011322.01.T01 | MTR_4g057850 | 31.461 | 267 | 169 | 8 | 18 | 275 | 23 | 284 | 1.05e-23 | 99.0 |
| MsG0280011322.01.T01 | MTR_3g098460 | 26.545 | 275 | 194 | 4 | 17 | 288 | 205 | 474 | 7.99e-23 | 98.2 |
| MsG0280011322.01.T01 | MTR_6g034515 | 27.957 | 279 | 170 | 7 | 32 | 296 | 82 | 343 | 3.38e-22 | 95.5 |
| MsG0280011322.01.T01 | MTR_7g084400 | 27.431 | 288 | 188 | 7 | 15 | 294 | 211 | 485 | 4.48e-22 | 96.3 |
| MsG0280011322.01.T01 | MTR_7g084400 | 24.365 | 197 | 133 | 5 | 6 | 196 | 299 | 485 | 2.88e-12 | 67.0 |
| MsG0280011322.01.T01 | MTR_1g090330 | 24.903 | 257 | 177 | 5 | 30 | 275 | 27 | 278 | 4.89e-21 | 91.3 |
| MsG0280011322.01.T01 | MTR_1g090330 | 27.119 | 177 | 119 | 3 | 126 | 297 | 30 | 201 | 1.92e-13 | 69.7 |
| MsG0280011322.01.T01 | MTR_8g092080 | 30.980 | 255 | 141 | 10 | 23 | 270 | 55 | 281 | 8.88e-21 | 90.9 |
| MsG0280011322.01.T01 | MTR_3g107510 | 30.270 | 185 | 117 | 3 | 104 | 288 | 117 | 289 | 1.30e-19 | 88.6 |
| MsG0280011322.01.T01 | MTR_3g107510 | 22.603 | 292 | 214 | 5 | 9 | 297 | 114 | 396 | 1.23e-15 | 77.0 |
| MsG0280011322.01.T01 | MTR_4g018750 | 24.265 | 272 | 183 | 7 | 12 | 269 | 10 | 272 | 3.32e-19 | 86.3 |
| MsG0280011322.01.T01 | MTR_4g018750 | 27.647 | 170 | 115 | 3 | 126 | 288 | 31 | 199 | 1.49e-11 | 64.3 |
| MsG0280011322.01.T01 | MTR_7g064980 | 31.414 | 191 | 122 | 4 | 105 | 288 | 21 | 209 | 4.30e-19 | 86.3 |
| MsG0280011322.01.T01 | MTR_7g064980 | 24.088 | 274 | 180 | 7 | 16 | 269 | 24 | 289 | 2.75e-13 | 69.3 |
| MsG0280011322.01.T01 | MTR_1g012030 | 29.730 | 185 | 118 | 3 | 104 | 288 | 134 | 306 | 5.87e-19 | 86.7 |
| MsG0280011322.01.T01 | MTR_1g012030 | 23.973 | 292 | 206 | 6 | 9 | 295 | 131 | 411 | 1.15e-15 | 77.0 |
| MsG0280011322.01.T01 | MTR_8g098240 | 30.142 | 282 | 158 | 11 | 23 | 288 | 323 | 581 | 1.39e-18 | 86.3 |
| MsG0280011322.01.T01 | MTR_3g104600 | 25.503 | 298 | 193 | 8 | 15 | 289 | 33 | 324 | 1.63e-18 | 84.7 |
| MsG0280011322.01.T01 | MTR_4g114320 | 29.545 | 176 | 107 | 4 | 102 | 274 | 116 | 277 | 2.16e-18 | 85.1 |
| MsG0280011322.01.T01 | MTR_4g114320 | 23.509 | 285 | 208 | 4 | 15 | 297 | 121 | 397 | 4.34e-16 | 78.2 |
| MsG0280011322.01.T01 | MTR_1g088995 | 25.940 | 266 | 178 | 8 | 11 | 268 | 27 | 281 | 7.47e-18 | 82.4 |
| MsG0280011322.01.T01 | MTR_6g091800 | 30.918 | 207 | 125 | 3 | 94 | 288 | 3 | 203 | 1.89e-17 | 80.9 |
| MsG0280011322.01.T01 | MTR_6g015860 | 23.906 | 297 | 200 | 8 | 19 | 297 | 21 | 309 | 2.26e-17 | 81.3 |
| MsG0280011322.01.T01 | MTR_6g015860 | 29.444 | 180 | 114 | 6 | 114 | 286 | 19 | 192 | 6.63e-13 | 68.6 |
| MsG0280011322.01.T01 | MTR_8g086070 | 26.882 | 279 | 186 | 6 | 15 | 284 | 19 | 288 | 2.34e-17 | 80.9 |
| MsG0280011322.01.T01 | MTR_6g091800 | 30.918 | 207 | 125 | 3 | 94 | 288 | 3 | 203 | 2.44e-17 | 80.5 |
| MsG0280011322.01.T01 | MTR_6g091800 | 22.541 | 244 | 172 | 5 | 15 | 246 | 17 | 255 | 1.67e-11 | 63.9 |
| MsG0280011322.01.T01 | MTR_4g018750 | 24.335 | 263 | 176 | 7 | 12 | 260 | 10 | 263 | 3.72e-17 | 80.1 |
| MsG0280011322.01.T01 | MTR_4g018750 | 27.647 | 170 | 115 | 3 | 126 | 288 | 31 | 199 | 2.24e-11 | 63.5 |
| MsG0280011322.01.T01 | MTR_6g091800 | 30.918 | 207 | 125 | 3 | 94 | 288 | 3 | 203 | 4.37e-17 | 80.5 |
| MsG0280011322.01.T01 | MTR_6g091800 | 22.491 | 289 | 204 | 6 | 15 | 288 | 17 | 300 | 1.70e-13 | 70.1 |
| MsG0280011322.01.T01 | MTR_7g109135 | 25.606 | 289 | 197 | 8 | 23 | 297 | 25 | 309 | 8.75e-17 | 79.7 |
| MsG0280011322.01.T01 | MTR_7g109135 | 35.602 | 191 | 117 | 4 | 110 | 297 | 22 | 209 | 8.83e-17 | 79.7 |
| MsG0280011322.01.T01 | MTR_6g091800 | 31.383 | 188 | 111 | 3 | 94 | 269 | 3 | 184 | 1.36e-16 | 76.6 |
| MsG0280011322.01.T01 | MTR_5g073040 | 28.352 | 261 | 165 | 7 | 18 | 268 | 40 | 288 | 1.72e-16 | 79.0 |
| MsG0280011322.01.T01 | MTR_5g073040 | 28.877 | 187 | 116 | 4 | 111 | 294 | 40 | 212 | 1.31e-14 | 73.6 |
| MsG0280011322.01.T01 | MTR_2g032610 | 23.828 | 256 | 180 | 5 | 46 | 289 | 62 | 314 | 1.88e-16 | 78.6 |
| MsG0280011322.01.T01 | MTR_7g066690 | 23.221 | 267 | 182 | 7 | 17 | 269 | 17 | 274 | 3.30e-16 | 77.8 |
| MsG0280011322.01.T01 | MTR_7g015870 | 26.056 | 284 | 175 | 12 | 19 | 281 | 25 | 294 | 2.66e-15 | 75.5 |
| MsG0280011322.01.T01 | MTR_3g028590 | 25.939 | 293 | 199 | 7 | 16 | 295 | 92 | 379 | 2.78e-15 | 75.9 |
| MsG0280011322.01.T01 | MTR_3g028590 | 25.939 | 293 | 199 | 7 | 16 | 295 | 96 | 383 | 3.00e-15 | 75.9 |
| MsG0280011322.01.T01 | MTR_7g015870 | 24.333 | 300 | 195 | 10 | 19 | 297 | 29 | 317 | 3.00e-15 | 75.1 |
| MsG0280011322.01.T01 | MTR_1g087840 | 26.449 | 276 | 186 | 7 | 33 | 296 | 35 | 305 | 3.38e-15 | 75.1 |
| MsG0280011322.01.T01 | MTR_5g055410 | 26.316 | 285 | 171 | 8 | 33 | 294 | 37 | 305 | 3.50e-15 | 75.5 |
| MsG0280011322.01.T01 | MTR_5g055410 | 33.333 | 171 | 101 | 6 | 123 | 288 | 34 | 196 | 3.11e-12 | 66.6 |
| MsG0280011322.01.T01 | MTR_5g009500 | 30.726 | 179 | 105 | 6 | 103 | 268 | 26 | 198 | 5.94e-15 | 74.7 |
| MsG0280011322.01.T01 | MTR_5g009500 | 23.529 | 323 | 200 | 8 | 7 | 294 | 28 | 338 | 8.53e-15 | 73.9 |
| MsG0280011322.01.T01 | MTR_8g068890 | 25.510 | 294 | 178 | 6 | 17 | 275 | 6 | 293 | 6.07e-15 | 74.3 |
| MsG0280011322.01.T01 | MTR_8g019480 | 24.917 | 301 | 190 | 7 | 32 | 297 | 48 | 347 | 7.25e-15 | 74.3 |
| MsG0280011322.01.T01 | MTR_5g081150 | 29.341 | 167 | 107 | 4 | 103 | 260 | 24 | 188 | 8.09e-15 | 73.2 |
| MsG0280011322.01.T01 | MTR_8g027975 | 31.288 | 163 | 101 | 5 | 112 | 268 | 54 | 211 | 8.10e-15 | 74.3 |
| MsG0280011322.01.T01 | MTR_8g027975 | 23.270 | 318 | 209 | 9 | 7 | 294 | 41 | 353 | 4.92e-14 | 72.0 |
| MsG0280011322.01.T01 | MTR_7g084400 | 32.727 | 165 | 100 | 3 | 112 | 274 | 210 | 365 | 8.99e-15 | 74.3 |
| MsG0280011322.01.T01 | MTR_7g084400 | 28.723 | 188 | 117 | 6 | 15 | 194 | 205 | 383 | 4.19e-13 | 69.7 |
| MsG0280011322.01.T01 | MTR_5g081150 | 29.341 | 167 | 107 | 4 | 103 | 260 | 24 | 188 | 1.33e-14 | 72.4 |
| MsG0280011322.01.T01 | MTR_5g081150 | 29.341 | 167 | 107 | 4 | 103 | 260 | 24 | 188 | 2.11e-14 | 72.8 |
| MsG0280011322.01.T01 | MTR_2g436930 | 27.273 | 209 | 135 | 4 | 5 | 196 | 26 | 234 | 2.52e-14 | 71.2 |
| MsG0280011322.01.T01 | MTR_3g100570 | 23.734 | 316 | 201 | 7 | 15 | 297 | 4 | 312 | 5.02e-14 | 71.6 |
| MsG0280011322.01.T01 | MTR_5g032420 | 24.415 | 299 | 182 | 7 | 17 | 275 | 6 | 300 | 6.03e-14 | 71.6 |
| MsG0280011322.01.T01 | MTR_2g436930 | 27.143 | 210 | 136 | 4 | 5 | 197 | 116 | 325 | 6.53e-14 | 71.2 |
| MsG0280011322.01.T01 | MTR_2g436930 | 24.194 | 310 | 189 | 10 | 19 | 289 | 17 | 319 | 2.57e-11 | 63.9 |
| MsG0280011322.01.T01 | MTR_3g025800 | 26.224 | 286 | 177 | 8 | 13 | 268 | 24 | 305 | 8.53e-14 | 71.2 |
| MsG0280011322.01.T01 | MTR_3g025800 | 28.241 | 216 | 115 | 6 | 93 | 275 | 1 | 209 | 6.25e-12 | 65.9 |
| MsG0280011322.01.T01 | MTR_8g036880 | 24.727 | 275 | 190 | 5 | 16 | 276 | 101 | 372 | 2.11e-13 | 70.5 |
| MsG0280011322.01.T01 | MTR_6g091800 | 27.826 | 230 | 124 | 4 | 95 | 288 | 4 | 227 | 2.37e-13 | 69.3 |
| MsG0280011322.01.T01 | MTR_7g109135 | 25.957 | 235 | 168 | 5 | 65 | 297 | 1 | 231 | 2.39e-13 | 68.6 |
| MsG0280011322.01.T01 | MTR_6g034145 | 34.483 | 145 | 82 | 2 | 156 | 288 | 6 | 149 | 2.57e-13 | 68.9 |
| MsG0280011322.01.T01 | MTR_3g462140 | 24.080 | 299 | 201 | 8 | 12 | 294 | 10 | 298 | 2.72e-13 | 69.3 |
| MsG0280011322.01.T01 | MTR_6g091800 | 28.182 | 220 | 116 | 4 | 94 | 277 | 3 | 216 | 3.21e-13 | 68.9 |
| MsG0280011322.01.T01 | MTR_6g091800 | 27.706 | 231 | 125 | 4 | 94 | 288 | 3 | 227 | 3.70e-13 | 68.9 |
| MsG0280011322.01.T01 | MTR_6g091800 | 21.333 | 300 | 192 | 5 | 15 | 275 | 17 | 311 | 1.57e-12 | 67.4 |
| MsG0280011322.01.T01 | MTR_6g091800 | 28.182 | 220 | 116 | 4 | 94 | 277 | 3 | 216 | 4.00e-13 | 69.3 |
| MsG0280011322.01.T01 | MTR_6g091800 | 21.333 | 300 | 192 | 5 | 15 | 275 | 17 | 311 | 1.56e-12 | 67.4 |
| MsG0280011322.01.T01 | MTR_4g119770 | 25.714 | 210 | 139 | 4 | 5 | 197 | 117 | 326 | 4.51e-13 | 68.9 |
| MsG0280011322.01.T01 | MTR_4g119770 | 27.513 | 189 | 119 | 4 | 104 | 275 | 4 | 191 | 5.46e-11 | 62.8 |
| MsG0280011322.01.T01 | MTR_2g098070 | 27.778 | 144 | 100 | 2 | 145 | 288 | 207 | 346 | 8.41e-13 | 68.6 |
| MsG0280011322.01.T01 | MTR_7g109135 | 26.257 | 179 | 127 | 4 | 121 | 297 | 35 | 210 | 1.89e-12 | 65.9 |
| MsG0280011322.01.T01 | MTR_6g091800 | 27.962 | 211 | 110 | 4 | 95 | 269 | 4 | 208 | 1.97e-12 | 65.5 |
| MsG0280011322.01.T01 | MTR_4g094578 | 25.000 | 240 | 159 | 7 | 17 | 243 | 29 | 260 | 3.16e-12 | 66.2 |
| MsG0280011322.01.T01 | MTR_7g109135 | 24.221 | 289 | 194 | 8 | 23 | 297 | 25 | 302 | 3.54e-12 | 66.2 |
| MsG0280011322.01.T01 | MTR_7g109135 | 32.804 | 189 | 118 | 4 | 110 | 297 | 22 | 202 | 6.52e-12 | 65.5 |
| MsG0280011322.01.T01 | MTR_8g086070 | 26.230 | 183 | 114 | 4 | 113 | 288 | 24 | 192 | 4.39e-12 | 64.7 |
| MsG0280011322.01.T01 | MTR_8g086070 | 28.962 | 183 | 122 | 4 | 15 | 194 | 19 | 196 | 6.84e-11 | 61.2 |
| MsG0280011322.01.T01 | MTR_5g081910 | 22.222 | 297 | 179 | 10 | 31 | 284 | 22 | 309 | 9.19e-12 | 65.1 |
| MsG0280011322.01.T01 | MTR_4g078545 | 24.126 | 286 | 200 | 6 | 16 | 288 | 74 | 355 | 1.70e-11 | 64.7 |
| MsG0280011322.01.T01 | MTR_8g076760 | 30.726 | 179 | 110 | 7 | 124 | 296 | 28 | 198 | 1.99e-11 | 63.9 |
| MsG0280011322.01.T01 | MTR_4g119770 | 27.513 | 189 | 119 | 4 | 104 | 275 | 4 | 191 | 2.65e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011322.01.T01 | AT1G79900 | 61.409 | 298 | 102 | 4 | 1 | 297 | 1 | 286 | 5.03e-115 | 333 |
| MsG0280011322.01.T01 | AT5G46800 | 33.993 | 303 | 178 | 7 | 10 | 294 | 1 | 299 | 1.14e-42 | 149 |
| MsG0280011322.01.T01 | AT5G46800 | 33.993 | 303 | 178 | 7 | 10 | 294 | 1 | 299 | 1.14e-42 | 149 |
| MsG0280011322.01.T01 | AT5G46800 | 33.993 | 303 | 178 | 7 | 10 | 294 | 1 | 299 | 1.14e-42 | 149 |
| MsG0280011322.01.T01 | AT2G33820 | 28.231 | 294 | 194 | 6 | 15 | 294 | 16 | 306 | 3.70e-32 | 121 |
| MsG0280011322.01.T01 | AT2G33820 | 27.483 | 302 | 194 | 7 | 15 | 294 | 16 | 314 | 2.39e-29 | 114 |
| MsG0280011322.01.T01 | AT1G34065 | 32.031 | 256 | 150 | 8 | 15 | 270 | 73 | 304 | 4.01e-26 | 105 |
| MsG0280011322.01.T01 | AT1G34065 | 32.283 | 254 | 148 | 8 | 17 | 270 | 82 | 311 | 5.19e-26 | 105 |
| MsG0280011322.01.T01 | AT5G19760 | 30.000 | 280 | 176 | 7 | 15 | 284 | 16 | 285 | 3.68e-23 | 97.1 |
| MsG0280011322.01.T01 | AT5G19760 | 26.042 | 192 | 121 | 4 | 113 | 297 | 21 | 198 | 2.04e-13 | 69.7 |
| MsG0280011322.01.T01 | AT2G33820 | 28.319 | 226 | 152 | 5 | 76 | 294 | 3 | 225 | 9.75e-23 | 94.4 |
| MsG0280011322.01.T01 | AT4G39460 | 29.181 | 281 | 175 | 8 | 17 | 297 | 58 | 314 | 1.31e-22 | 95.9 |
| MsG0280011322.01.T01 | AT4G39460 | 29.181 | 281 | 175 | 8 | 17 | 297 | 58 | 314 | 1.31e-22 | 95.9 |
| MsG0280011322.01.T01 | AT4G39460 | 29.181 | 281 | 175 | 8 | 17 | 297 | 58 | 314 | 1.31e-22 | 95.9 |
| MsG0280011322.01.T01 | AT4G32400 | 34.503 | 171 | 100 | 3 | 104 | 274 | 109 | 267 | 2.42e-22 | 96.3 |
| MsG0280011322.01.T01 | AT4G32400 | 25.342 | 292 | 206 | 7 | 9 | 297 | 106 | 388 | 2.86e-18 | 84.7 |
| MsG0280011322.01.T01 | AT2G33820 | 27.111 | 225 | 148 | 5 | 15 | 225 | 16 | 238 | 2.49e-22 | 94.4 |
| MsG0280011322.01.T01 | AT2G33820 | 27.419 | 186 | 121 | 5 | 111 | 288 | 19 | 198 | 1.41e-11 | 63.9 |
| MsG0280011322.01.T01 | AT5G01340 | 29.478 | 268 | 174 | 7 | 18 | 275 | 18 | 280 | 9.77e-22 | 93.2 |
| MsG0280011322.01.T01 | AT3G54110 | 25.461 | 271 | 181 | 7 | 12 | 269 | 10 | 272 | 9.60e-21 | 90.5 |
| MsG0280011322.01.T01 | AT3G54110 | 28.994 | 169 | 113 | 3 | 126 | 288 | 31 | 198 | 7.31e-13 | 68.2 |
| MsG0280011322.01.T01 | AT4G03115 | 27.711 | 249 | 152 | 8 | 31 | 268 | 52 | 283 | 6.76e-20 | 88.2 |
| MsG0280011322.01.T01 | AT4G03115 | 27.734 | 256 | 157 | 8 | 31 | 275 | 84 | 322 | 8.02e-20 | 88.6 |
| MsG0280011322.01.T01 | AT1G07030 | 30.337 | 267 | 153 | 9 | 18 | 268 | 41 | 290 | 3.55e-19 | 86.7 |
| MsG0280011322.01.T01 | AT3G55640 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 6.67e-19 | 84.7 |
| MsG0280011322.01.T01 | AT3G55640 | 32.738 | 168 | 106 | 3 | 112 | 274 | 41 | 206 | 6.67e-19 | 84.7 |
| MsG0280011322.01.T01 | AT4G03115 | 28.085 | 235 | 147 | 6 | 46 | 275 | 2 | 219 | 7.85e-19 | 84.0 |
| MsG0280011322.01.T01 | AT4G03115 | 28.384 | 229 | 142 | 6 | 52 | 275 | 16 | 227 | 1.53e-18 | 83.6 |
| MsG0280011322.01.T01 | AT3G55640 | 32.000 | 175 | 112 | 3 | 105 | 274 | 34 | 206 | 3.01e-18 | 84.0 |
| MsG0280011322.01.T01 | AT3G55640 | 25.818 | 275 | 172 | 12 | 16 | 269 | 37 | 300 | 5.82e-14 | 71.6 |
| MsG0280011322.01.T01 | AT3G55640 | 30.168 | 179 | 118 | 5 | 16 | 190 | 144 | 319 | 9.13e-13 | 68.2 |
| MsG0280011322.01.T01 | AT3G55640 | 32.000 | 175 | 112 | 3 | 105 | 274 | 34 | 206 | 3.01e-18 | 84.0 |
| MsG0280011322.01.T01 | AT3G55640 | 25.818 | 275 | 172 | 12 | 16 | 269 | 37 | 300 | 5.82e-14 | 71.6 |
| MsG0280011322.01.T01 | AT3G55640 | 30.168 | 179 | 118 | 5 | 16 | 190 | 144 | 319 | 9.13e-13 | 68.2 |
| MsG0280011322.01.T01 | AT1G25380 | 26.642 | 274 | 181 | 7 | 33 | 292 | 37 | 304 | 3.25e-18 | 84.3 |
| MsG0280011322.01.T01 | AT1G25380 | 26.642 | 274 | 181 | 7 | 33 | 292 | 37 | 304 | 3.25e-18 | 84.3 |
| MsG0280011322.01.T01 | AT1G14140 | 25.483 | 259 | 172 | 6 | 31 | 275 | 30 | 281 | 3.51e-18 | 83.6 |
| MsG0280011322.01.T01 | AT4G11440 | 26.644 | 289 | 178 | 8 | 15 | 288 | 328 | 597 | 3.84e-18 | 85.1 |
| MsG0280011322.01.T01 | AT4G11440 | 26.644 | 289 | 178 | 8 | 15 | 288 | 328 | 597 | 3.84e-18 | 85.1 |
| MsG0280011322.01.T01 | AT2G30160 | 27.737 | 274 | 154 | 8 | 18 | 268 | 43 | 295 | 7.86e-18 | 82.8 |
| MsG0280011322.01.T01 | AT4G26180 | 29.949 | 197 | 120 | 3 | 104 | 288 | 15 | 205 | 1.60e-17 | 81.3 |
| MsG0280011322.01.T01 | AT4G26180 | 23.077 | 286 | 190 | 11 | 6 | 269 | 7 | 284 | 3.68e-13 | 68.9 |
| MsG0280011322.01.T01 | AT1G74240 | 28.014 | 282 | 174 | 7 | 13 | 268 | 32 | 310 | 2.04e-17 | 82.0 |
| MsG0280011322.01.T01 | AT5G09470 | 28.125 | 224 | 150 | 4 | 55 | 275 | 98 | 313 | 2.76e-17 | 81.3 |
| MsG0280011322.01.T01 | AT4G26180 | 29.949 | 197 | 120 | 3 | 104 | 288 | 15 | 205 | 3.56e-17 | 80.9 |
| MsG0280011322.01.T01 | AT4G26180 | 22.222 | 306 | 208 | 11 | 6 | 289 | 7 | 304 | 4.47e-13 | 68.9 |
| MsG0280011322.01.T01 | AT3G53940 | 31.217 | 189 | 109 | 5 | 112 | 288 | 76 | 255 | 1.58e-16 | 78.6 |
| MsG0280011322.01.T01 | AT5G51050 | 24.735 | 283 | 198 | 7 | 17 | 294 | 223 | 495 | 3.50e-16 | 79.0 |
| MsG0280011322.01.T01 | AT5G51050 | 30.588 | 170 | 108 | 3 | 107 | 274 | 220 | 381 | 1.48e-13 | 71.2 |
| MsG0280011322.01.T01 | AT3G53940 | 31.217 | 189 | 109 | 5 | 112 | 288 | 76 | 255 | 4.73e-16 | 78.2 |
| MsG0280011322.01.T01 | AT3G53940 | 28.866 | 194 | 113 | 6 | 16 | 196 | 179 | 360 | 1.58e-13 | 70.5 |
| MsG0280011322.01.T01 | AT3G53940 | 24.265 | 272 | 180 | 8 | 16 | 269 | 72 | 335 | 6.54e-12 | 65.9 |
| MsG0280011322.01.T01 | AT4G01100 | 32.515 | 163 | 99 | 4 | 112 | 268 | 45 | 202 | 4.82e-16 | 77.8 |
| MsG0280011322.01.T01 | AT4G01100 | 22.981 | 322 | 205 | 9 | 7 | 294 | 32 | 344 | 3.62e-15 | 75.5 |
| MsG0280011322.01.T01 | AT5G58970 | 24.028 | 283 | 190 | 7 | 17 | 284 | 16 | 288 | 1.43e-15 | 75.9 |
| MsG0280011322.01.T01 | AT5G58970 | 27.778 | 180 | 122 | 4 | 116 | 288 | 22 | 200 | 6.04e-11 | 62.4 |
| MsG0280011322.01.T01 | AT2G37890 | 28.788 | 198 | 131 | 5 | 6 | 196 | 138 | 332 | 1.47e-15 | 76.3 |
| MsG0280011322.01.T01 | AT2G37890 | 23.588 | 301 | 202 | 7 | 15 | 296 | 43 | 334 | 7.78e-15 | 74.3 |
| MsG0280011322.01.T01 | AT2G37890 | 28.505 | 214 | 138 | 5 | 68 | 274 | 8 | 213 | 1.39e-14 | 73.6 |
| MsG0280011322.01.T01 | AT2G47490 | 26.354 | 277 | 186 | 7 | 33 | 297 | 33 | 303 | 1.59e-15 | 75.9 |
| MsG0280011322.01.T01 | AT4G24570 | 23.986 | 296 | 182 | 5 | 15 | 275 | 4 | 291 | 1.60e-15 | 75.9 |
| MsG0280011322.01.T01 | AT4G24570 | 29.688 | 192 | 103 | 4 | 126 | 288 | 22 | 210 | 6.68e-13 | 68.6 |
| MsG0280011322.01.T01 | AT4G01100 | 31.073 | 177 | 97 | 5 | 112 | 268 | 45 | 216 | 1.84e-15 | 76.3 |
| MsG0280011322.01.T01 | AT4G01100 | 23.333 | 330 | 208 | 9 | 7 | 294 | 32 | 358 | 2.18e-15 | 76.3 |
| MsG0280011322.01.T01 | AT4G01100 | 32.450 | 151 | 92 | 3 | 124 | 268 | 6 | 152 | 2.73e-15 | 75.1 |
| MsG0280011322.01.T01 | AT4G01100 | 24.151 | 265 | 175 | 6 | 53 | 294 | 33 | 294 | 4.20e-13 | 68.9 |
| MsG0280011322.01.T01 | AT5G48970 | 27.358 | 212 | 134 | 5 | 5 | 196 | 52 | 263 | 5.97e-15 | 73.6 |
| MsG0280011322.01.T01 | AT5G61810 | 25.391 | 256 | 175 | 7 | 17 | 269 | 65 | 307 | 6.58e-15 | 74.3 |
| MsG0280011322.01.T01 | AT5G61810 | 30.952 | 168 | 104 | 4 | 107 | 274 | 62 | 217 | 5.27e-12 | 65.9 |
| MsG0280011322.01.T01 | AT1G72820 | 26.316 | 323 | 204 | 10 | 7 | 297 | 21 | 341 | 9.82e-15 | 73.9 |
| MsG0280011322.01.T01 | AT1G72820 | 26.316 | 323 | 204 | 10 | 7 | 297 | 21 | 341 | 9.82e-15 | 73.9 |
| MsG0280011322.01.T01 | AT5G48970 | 27.230 | 213 | 135 | 5 | 5 | 197 | 123 | 335 | 1.61e-14 | 73.2 |
| MsG0280011322.01.T01 | AT5G61810 | 24.199 | 281 | 197 | 7 | 17 | 294 | 208 | 475 | 1.86e-14 | 73.9 |
| MsG0280011322.01.T01 | AT5G61810 | 30.952 | 168 | 104 | 4 | 107 | 274 | 205 | 360 | 1.27e-11 | 65.1 |
| MsG0280011322.01.T01 | AT2G39970 | 21.160 | 293 | 189 | 6 | 31 | 284 | 22 | 311 | 3.18e-14 | 72.4 |
| MsG0280011322.01.T01 | AT5G42130 | 24.549 | 277 | 183 | 7 | 33 | 297 | 134 | 396 | 3.61e-14 | 72.8 |
| MsG0280011322.01.T01 | AT1G74240 | 26.996 | 263 | 163 | 7 | 32 | 268 | 3 | 262 | 4.16e-14 | 72.0 |
| MsG0280011322.01.T01 | AT5G15640 | 22.697 | 304 | 209 | 10 | 15 | 297 | 18 | 316 | 6.10e-14 | 71.2 |
| MsG0280011322.01.T01 | AT5G15640 | 22.697 | 304 | 209 | 10 | 15 | 297 | 25 | 323 | 6.19e-14 | 71.6 |
| MsG0280011322.01.T01 | AT5G07320 | 24.138 | 261 | 184 | 6 | 30 | 288 | 222 | 470 | 6.38e-14 | 72.0 |
| MsG0280011322.01.T01 | AT3G20240 | 23.746 | 299 | 194 | 8 | 5 | 282 | 40 | 325 | 2.53e-13 | 69.7 |
| MsG0280011322.01.T01 | AT5G66380 | 26.936 | 297 | 188 | 11 | 19 | 294 | 12 | 300 | 3.31e-13 | 69.3 |
| MsG0280011322.01.T01 | AT5G17400 | 21.978 | 273 | 195 | 5 | 16 | 274 | 13 | 281 | 3.72e-13 | 68.9 |
| MsG0280011322.01.T01 | AT3G08580 | 31.159 | 138 | 89 | 3 | 152 | 288 | 233 | 365 | 8.57e-13 | 68.6 |
| MsG0280011322.01.T01 | AT3G08580 | 31.159 | 138 | 89 | 3 | 152 | 288 | 233 | 365 | 8.57e-13 | 68.6 |
| MsG0280011322.01.T01 | AT5G13490 | 29.167 | 144 | 98 | 2 | 145 | 288 | 230 | 369 | 9.63e-13 | 68.6 |
| MsG0280011322.01.T01 | AT5G13490 | 29.167 | 144 | 98 | 2 | 145 | 288 | 230 | 369 | 9.63e-13 | 68.6 |
| MsG0280011322.01.T01 | AT1G14560 | 21.481 | 270 | 186 | 6 | 33 | 281 | 43 | 307 | 1.13e-11 | 64.7 |
| MsG0280011322.01.T01 | AT1G14560 | 21.300 | 277 | 192 | 6 | 33 | 288 | 43 | 314 | 1.14e-11 | 64.7 |
| MsG0280011322.01.T01 | AT4G28390 | 24.126 | 286 | 200 | 7 | 16 | 288 | 82 | 363 | 1.34e-11 | 65.1 |
| MsG0280011322.01.T01 | AT4G28390 | 24.126 | 286 | 200 | 7 | 16 | 288 | 82 | 363 | 1.34e-11 | 65.1 |
| MsG0280011322.01.T01 | AT2G22500 | 23.077 | 299 | 193 | 6 | 17 | 284 | 6 | 298 | 1.78e-11 | 64.3 |
| MsG0280011322.01.T01 | AT2G26360 | 24.615 | 260 | 162 | 11 | 18 | 268 | 116 | 350 | 2.95e-11 | 63.9 |
| MsG0280011322.01.T01 | AT5G58970 | 27.778 | 180 | 122 | 4 | 116 | 288 | 22 | 200 | 4.75e-11 | 62.4 |
| MsG0280011322.01.T01 | AT4G03115 | 27.222 | 180 | 118 | 4 | 118 | 296 | 46 | 213 | 9.39e-11 | 61.2 |
Find 66 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATCTTTGATTATCTTT+AGG | 0.173085 | 2:+82392046 | None:intergenic |
| TTCATCTTTGATTATCTTTA+GGG | 0.183513 | 2:+82392047 | None:intergenic |
| TGCTATATTTCCTGCTTATC+AGG | 0.225299 | 2:-82391962 | MsG0280011322.01.T01:CDS |
| CCTGCTCTTGCCTTATACTT+TGG | 0.251450 | 2:-82392267 | MsG0280011322.01.T01:CDS |
| GAGTTTGTAGCAGGTGGATT+TGG | 0.271345 | 2:-82393157 | MsG0280011322.01.T01:CDS |
| CTGCTCTTGCCTTATACTTT+GGG | 0.274870 | 2:-82392266 | MsG0280011322.01.T01:CDS |
| CGCGGCATTTATCGAGGATT+TGG | 0.311079 | 2:-82392312 | MsG0280011322.01.T01:CDS |
| CTGCTTATCAGGTTGCTCTA+AGG | 0.312766 | 2:-82391951 | MsG0280011322.01.T01:CDS |
| CTCATATGTCCCAAAGTATA+AGG | 0.322620 | 2:+82392257 | None:intergenic |
| TCCCTTGCAAATGTTGCTTT+AGG | 0.334721 | 2:-82392492 | MsG0280011322.01.T01:CDS |
| TGAGTCTTGCTAAGAACATT+TGG | 0.357193 | 2:-82392350 | MsG0280011322.01.T01:CDS |
| ATTGTGCTATGGAGAGGTTT+AGG | 0.362909 | 2:-82392018 | MsG0280011322.01.T01:CDS |
| TAGCATCTTTAGAAATTTGT+TGG | 0.366028 | 2:-82393053 | MsG0280011322.01.T01:CDS |
| ATTGAAATACAAAGGCATCT+TGG | 0.398539 | 2:-82392076 | MsG0280011322.01.T01:CDS |
| CCGTGGCATGGCTGCTCCAT+TGG | 0.404033 | 2:-82393005 | MsG0280011322.01.T01:CDS |
| GCTAATAGCAGATGCATTGC+CGG | 0.412908 | 2:+82393072 | None:intergenic |
| CTTGTCTTTATAACATCTGT+AGG | 0.415915 | 2:+82392123 | None:intergenic |
| GTGAGTACTATGTTTGTAGC+AGG | 0.467035 | 2:-82392183 | MsG0280011322.01.T01:CDS |
| CTTGCAAATGTTGCTTTAGG+AGG | 0.470655 | 2:-82392489 | MsG0280011322.01.T01:CDS |
| GCTGCTCCATTGGCCTCTGT+TGG | 0.474895 | 2:-82392995 | MsG0280011322.01.T01:CDS |
| CAGGGGAGATCAACAGACTT+TGG | 0.474938 | 2:+82392448 | None:intergenic |
| CTTTAGAAATTTGTTGGCTA+AGG | 0.477937 | 2:-82393047 | MsG0280011322.01.T01:CDS |
| GGGAGAGAGTTTGTAGCAGG+TGG | 0.478671 | 2:-82393163 | MsG0280011322.01.T01:CDS |
| GGTGGATTTGGAGGCACTGC+TGG | 0.480271 | 2:-82393145 | MsG0280011322.01.T01:CDS |
| ATGACACGAATTGTATCCAT+TGG | 0.484601 | 2:+82393106 | None:intergenic |
| GCTTTAGGAGGACTCGGTGC+AGG | 0.493059 | 2:-82392477 | MsG0280011322.01.T01:CDS |
| AGAAATTTGTTGGCTAAGGA+AGG | 0.493068 | 2:-82393043 | MsG0280011322.01.T01:CDS |
| TTTGTAGCAGGTGGATTTGG+AGG | 0.493364 | 2:-82393154 | MsG0280011322.01.T01:CDS |
| CGTGTCATGCAACAACAATC+CGG | 0.496433 | 2:-82393091 | MsG0280011322.01.T01:CDS |
| TCACAACTTTCTCTGCAACC+AGG | 0.509143 | 2:+82392213 | None:intergenic |
| CTTAGAGCAACCTGATAAGC+AGG | 0.518959 | 2:+82391952 | None:intergenic |
| TGCAAGGGAAGGAGGTCCAT+TGG | 0.524281 | 2:+82392506 | None:intergenic |
| AGCTCTTCTACTTCTTCCAA+TGG | 0.526599 | 2:-82392522 | MsG0280011322.01.T01:CDS |
| CACAACTTTCTCTGCAACCA+GGG | 0.526753 | 2:+82392214 | None:intergenic |
| GATTGGCAGGGATAGCAAGT+TGG | 0.531356 | 2:-82392158 | MsG0280011322.01.T01:CDS |
| GTGGGGAGAGAGTTTGTAGC+AGG | 0.531812 | 2:-82393166 | MsG0280011322.01.T01:CDS |
| CACTGCTTTGTACCGTGGCA+TGG | 0.544120 | 2:-82393017 | MsG0280011322.01.T01:CDS |
| CTCCTAAAGCAACATTTGCA+AGG | 0.547369 | 2:+82392490 | None:intergenic |
| GGTTCTATTGTGCTATGGAG+AGG | 0.556965 | 2:-82392024 | MsG0280011322.01.T01:CDS |
| CCAAAGTATAAGGCAAGAGC+AGG | 0.559278 | 2:+82392267 | None:intergenic |
| ATGAAGGTTCTATTGTGCTA+TGG | 0.562236 | 2:-82392029 | MsG0280011322.01.T01:CDS |
| TCTTCTTCATTGAAATACAA+AGG | 0.564554 | 2:-82392084 | MsG0280011322.01.T01:CDS |
| CTAAAGATAATCAAAGATGA+AGG | 0.565754 | 2:-82392045 | MsG0280011322.01.T01:CDS |
| TGACACGAATTGTATCCATT+GGG | 0.569041 | 2:+82393107 | None:intergenic |
| AATGTTGCTTTAGGAGGACT+CGG | 0.571697 | 2:-82392483 | MsG0280011322.01.T01:CDS |
| ATGTTCTTAGCAAGACTCAT+GGG | 0.580615 | 2:+82392354 | None:intergenic |
| TTGTCTTTATAACATCTGTA+GGG | 0.581616 | 2:+82392124 | None:intergenic |
| CCAATGGAGCAGCCATGCCA+CGG | 0.582140 | 2:+82393005 | None:intergenic |
| GCAACATTTGCAAGGGAAGG+AGG | 0.582853 | 2:+82392498 | None:intergenic |
| AATGTTCTTAGCAAGACTCA+TGG | 0.587401 | 2:+82392353 | None:intergenic |
| GGCCTTCGCGGCATTTATCG+AGG | 0.588676 | 2:-82392318 | MsG0280011322.01.T01:CDS |
| AAAGCAACATTTGCAAGGGA+AGG | 0.593757 | 2:+82392495 | None:intergenic |
| ATCCTCGATAAATGCCGCGA+AGG | 0.596054 | 2:+82392316 | None:intergenic |
| TGAGTACTATGTTTGTAGCA+GGG | 0.596692 | 2:-82392182 | MsG0280011322.01.T01:CDS |
| TATAATCTCAAGTTACCCAA+TGG | 0.602949 | 2:-82393122 | MsG0280011322.01.T01:CDS |
| TCCTAAAGCAACATTTGCAA+GGG | 0.603015 | 2:+82392491 | None:intergenic |
| ATGCCACGGTACAAAGCAGT+GGG | 0.616745 | 2:+82393019 | None:intergenic |
| AGTACTATGTTTGTAGCAGG+GGG | 0.622207 | 2:-82392180 | MsG0280011322.01.T01:CDS |
| TGAAAACCAACAGAGGCCAA+TGG | 0.622214 | 2:+82392989 | None:intergenic |
| GAGTACTATGTTTGTAGCAG+GGG | 0.622310 | 2:-82392181 | MsG0280011322.01.T01:CDS |
| TTGGGACATATGAGTACACA+AGG | 0.635076 | 2:-82392248 | MsG0280011322.01.T01:CDS |
| CATGCCACGGTACAAAGCAG+TGG | 0.646503 | 2:+82393018 | None:intergenic |
| GGACCCACTGCTTTGTACCG+TGG | 0.648343 | 2:-82393022 | MsG0280011322.01.T01:CDS |
| ATTAACCTGAAAACCAACAG+AGG | 0.687882 | 2:+82392982 | None:intergenic |
| ACAAGGGAGAAACTTCACCC+TGG | 0.733018 | 2:-82392231 | MsG0280011322.01.T01:CDS |
| TGGGACATATGAGTACACAA+GGG | 0.792765 | 2:-82392247 | MsG0280011322.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTTAAAAAAAGCTC+AGG | + | Chr2:82392366-82392385 | None:intergenic | 15.0% |
| !! | ATGAACAATAACTTATGAAA+TGG | + | Chr2:82392503-82392522 | None:intergenic | 20.0% |
| !! | TTCATCTTTGATTATCTTTA+GGG | + | Chr2:82393091-82393110 | None:intergenic | 20.0% |
| ! | AAGAACATTTGGAAAAATGA+GGG | - | Chr2:82392796-82392815 | MsG0280011322.01.T01:intron | 25.0% |
| ! | CTAAAGATAATCAAAGATGA+AGG | - | Chr2:82393090-82393109 | MsG0280011322.01.T01:CDS | 25.0% |
| ! | CTTCATCTTTGATTATCTTT+AGG | + | Chr2:82393092-82393111 | None:intergenic | 25.0% |
| ! | TAAGAACATTTGGAAAAATG+AGG | - | Chr2:82392795-82392814 | MsG0280011322.01.T01:intron | 25.0% |
| ! | TCTTCTTCATTGAAATACAA+AGG | - | Chr2:82393051-82393070 | MsG0280011322.01.T01:CDS | 25.0% |
| ! | TGAAAACTCATACATATAAG+TGG | + | Chr2:82392310-82392329 | None:intergenic | 25.0% |
| ! | TTGTCTTTATAACATCTGTA+GGG | + | Chr2:82393014-82393033 | None:intergenic | 25.0% |
| !! | TAGCATCTTTAGAAATTTGT+TGG | - | Chr2:82392082-82392101 | MsG0280011322.01.T01:CDS | 25.0% |
| AAACTCATACATATAAGTGG+TGG | + | Chr2:82392307-82392326 | None:intergenic | 30.0% | |
| AGAATTTGATCGACAATGAA+CGG | + | Chr2:82392192-82392211 | None:intergenic | 30.0% | |
| CACAATCAATTTCATGATGA+GGG | - | Chr2:82392392-82392411 | MsG0280011322.01.T01:CDS | 30.0% | |
| CTTGTCTTTATAACATCTGT+AGG | + | Chr2:82393015-82393034 | None:intergenic | 30.0% | |
| TATAATCTCAAGTTACCCAA+TGG | - | Chr2:82392013-82392032 | MsG0280011322.01.T01:CDS | 30.0% | |
| TTATAAGATACGTTGTAACC+AGG | - | Chr2:82392267-82392286 | MsG0280011322.01.T01:CDS | 30.0% | |
| ! | AAATTTTGTGATGAACAGTG+TGG | - | Chr2:82391950-82391969 | MsG0280011322.01.T01:CDS | 30.0% |
| ! | AATTTTGTGATGAACAGTGT+GGG | - | Chr2:82391951-82391970 | MsG0280011322.01.T01:CDS | 30.0% |
| ! | TCAAGTTCTTTTGTAGTTGA+AGG | + | Chr2:82392732-82392751 | None:intergenic | 30.0% |
| !! | AATTTTAATCAGCTCAACAG+GGG | + | Chr2:82392707-82392726 | None:intergenic | 30.0% |
| !! | ATTGAAATACAAAGGCATCT+TGG | - | Chr2:82393059-82393078 | MsG0280011322.01.T01:CDS | 30.0% |
| !! | CTTTAGAAATTTGTTGGCTA+AGG | - | Chr2:82392088-82392107 | MsG0280011322.01.T01:CDS | 30.0% |
| !! | GAATTTTAATCAGCTCAACA+GGG | + | Chr2:82392708-82392727 | None:intergenic | 30.0% |
| AATGTTCTTAGCAAGACTCA+TGG | + | Chr2:82392785-82392804 | None:intergenic | 35.0% | |
| ATGAAGGTTCTATTGTGCTA+TGG | - | Chr2:82393106-82393125 | MsG0280011322.01.T01:CDS | 35.0% | |
| ATGACACGAATTGTATCCAT+TGG | + | Chr2:82392032-82392051 | None:intergenic | 35.0% | |
| ATGTTCTTAGCAAGACTCAT+GGG | + | Chr2:82392784-82392803 | None:intergenic | 35.0% | |
| ATTAACCTGAAAACCAACAG+AGG | + | Chr2:82392156-82392175 | None:intergenic | 35.0% | |
| CTCATATGTCCCAAAGTATA+AGG | + | Chr2:82392881-82392900 | None:intergenic | 35.0% | |
| GCACAATCAATTTCATGATG+AGG | - | Chr2:82392391-82392410 | MsG0280011322.01.T01:CDS | 35.0% | |
| TCCTAAAGCAACATTTGCAA+GGG | + | Chr2:82392647-82392666 | None:intergenic | 35.0% | |
| TGACACGAATTGTATCCATT+GGG | + | Chr2:82392031-82392050 | None:intergenic | 35.0% | |
| TGAGTACTATGTTTGTAGCA+GGG | - | Chr2:82392953-82392972 | MsG0280011322.01.T01:intron | 35.0% | |
| TGAGTCTTGCTAAGAACATT+TGG | - | Chr2:82392785-82392804 | MsG0280011322.01.T01:intron | 35.0% | |
| TGCTATATTTCCTGCTTATC+AGG | - | Chr2:82393173-82393192 | MsG0280011322.01.T01:CDS | 35.0% | |
| ! | ATTTTGTGATGAACAGTGTG+GGG | - | Chr2:82391952-82391971 | MsG0280011322.01.T01:CDS | 35.0% |
| !! | AGAAATTTGTTGGCTAAGGA+AGG | - | Chr2:82392092-82392111 | MsG0280011322.01.T01:CDS | 35.0% |
| !! | CGAATTTTAATCAGCTCAAC+AGG | + | Chr2:82392709-82392728 | None:intergenic | 35.0% |
| AAAGCAACATTTGCAAGGGA+AGG | + | Chr2:82392643-82392662 | None:intergenic | 40.0% | |
| AGCTCTTCTACTTCTTCCAA+TGG | - | Chr2:82392613-82392632 | MsG0280011322.01.T01:intron | 40.0% | |
| AGTACTATGTTTGTAGCAGG+GGG | - | Chr2:82392955-82392974 | MsG0280011322.01.T01:intron | 40.0% | |
| ATTGTGCTATGGAGAGGTTT+AGG | - | Chr2:82393117-82393136 | MsG0280011322.01.T01:CDS | 40.0% | |
| CTCCTAAAGCAACATTTGCA+AGG | + | Chr2:82392648-82392667 | None:intergenic | 40.0% | |
| CTGCTCTTGCCTTATACTTT+GGG | - | Chr2:82392869-82392888 | MsG0280011322.01.T01:intron | 40.0% | |
| GAGTACTATGTTTGTAGCAG+GGG | - | Chr2:82392954-82392973 | MsG0280011322.01.T01:intron | 40.0% | |
| GTGAGTACTATGTTTGTAGC+AGG | - | Chr2:82392952-82392971 | MsG0280011322.01.T01:intron | 40.0% | |
| TGGGACATATGAGTACACAA+GGG | - | Chr2:82392888-82392907 | MsG0280011322.01.T01:intron | 40.0% | |
| TTGGGACATATGAGTACACA+AGG | - | Chr2:82392887-82392906 | MsG0280011322.01.T01:intron | 40.0% | |
| !! | AATGTTGCTTTAGGAGGACT+CGG | - | Chr2:82392652-82392671 | MsG0280011322.01.T01:intron | 40.0% |
| !! | CTTGCAAATGTTGCTTTAGG+AGG | - | Chr2:82392646-82392665 | MsG0280011322.01.T01:intron | 40.0% |
| !! | TCCCTTGCAAATGTTGCTTT+AGG | - | Chr2:82392643-82392662 | MsG0280011322.01.T01:intron | 40.0% |
| CACAACTTTCTCTGCAACCA+GGG | + | Chr2:82392924-82392943 | None:intergenic | 45.0% | |
| CCAAAGTATAAGGCAAGAGC+AGG | + | Chr2:82392871-82392890 | None:intergenic | 45.0% | |
| CCTGCTCTTGCCTTATACTT+TGG | - | Chr2:82392868-82392887 | MsG0280011322.01.T01:intron | 45.0% | |
| CGTGTCATGCAACAACAATC+CGG | - | Chr2:82392044-82392063 | MsG0280011322.01.T01:CDS | 45.0% | |
| CTTAGAGCAACCTGATAAGC+AGG | + | Chr2:82393186-82393205 | None:intergenic | 45.0% | |
| GCTAATAGCAGATGCATTGC+CGG | + | Chr2:82392066-82392085 | None:intergenic | 45.0% | |
| GGTTCTATTGTGCTATGGAG+AGG | - | Chr2:82393111-82393130 | MsG0280011322.01.T01:CDS | 45.0% | |
| GTGGATTCGAGATTCAAACC+TGG | + | Chr2:82392288-82392307 | None:intergenic | 45.0% | |
| TATGTTTGTAGCAGGGGGAT+TGG | - | Chr2:82392960-82392979 | MsG0280011322.01.T01:intron | 45.0% | |
| TCACAACTTTCTCTGCAACC+AGG | + | Chr2:82392925-82392944 | None:intergenic | 45.0% | |
| TGAAAACCAACAGAGGCCAA+TGG | + | Chr2:82392149-82392168 | None:intergenic | 45.0% | |
| ! | CTGCTTATCAGGTTGCTCTA+AGG | - | Chr2:82393184-82393203 | MsG0280011322.01.T01:CDS | 45.0% |
| ! | GAGTTTGTAGCAGGTGGATT+TGG | - | Chr2:82391978-82391997 | MsG0280011322.01.T01:CDS | 45.0% |
| ! | TTTGTAGCAGGTGGATTTGG+AGG | - | Chr2:82391981-82392000 | MsG0280011322.01.T01:CDS | 45.0% |
| !!! | ATTGGCCTCTGTTGGTTTTC+AGG | - | Chr2:82392148-82392167 | MsG0280011322.01.T01:CDS | 45.0% |
| !!! | CTTTTTTTAAATTTTATTTT+CGG | - | Chr2:82392369-82392388 | MsG0280011322.01.T01:CDS | 5.0% |
| ACAAGGGAGAAACTTCACCC+TGG | - | Chr2:82392904-82392923 | MsG0280011322.01.T01:intron | 50.0% | |
| ATCCTCGATAAATGCCGCGA+AGG | + | Chr2:82392822-82392841 | None:intergenic | 50.0% | |
| ATGCCACGGTACAAAGCAGT+GGG | + | Chr2:82392119-82392138 | None:intergenic | 50.0% | |
| CAGGGGAGATCAACAGACTT+TGG | + | Chr2:82392690-82392709 | None:intergenic | 50.0% | |
| CGCGGCATTTATCGAGGATT+TGG | - | Chr2:82392823-82392842 | MsG0280011322.01.T01:intron | 50.0% | |
| GATTGGCAGGGATAGCAAGT+TGG | - | Chr2:82392977-82392996 | MsG0280011322.01.T01:intron | 50.0% | |
| GCAACATTTGCAAGGGAAGG+AGG | + | Chr2:82392640-82392659 | None:intergenic | 50.0% | |
| TGGAAAAATGAGGGCCTTCG+CGG | - | Chr2:82392805-82392824 | MsG0280011322.01.T01:intron | 50.0% | |
| CACTGCTTTGTACCGTGGCA+TGG | - | Chr2:82392118-82392137 | MsG0280011322.01.T01:CDS | 55.0% | |
| CATGCCACGGTACAAAGCAG+TGG | + | Chr2:82392120-82392139 | None:intergenic | 55.0% | |
| GGGAGAGAGTTTGTAGCAGG+TGG | - | Chr2:82391972-82391991 | MsG0280011322.01.T01:CDS | 55.0% | |
| GTGGGGAGAGAGTTTGTAGC+AGG | - | Chr2:82391969-82391988 | MsG0280011322.01.T01:CDS | 55.0% | |
| TGCAAGGGAAGGAGGTCCAT+TGG | + | Chr2:82392632-82392651 | None:intergenic | 55.0% | |
| ! | TTGTAGCAGGGGGATTGGCA+GGG | - | Chr2:82392965-82392984 | MsG0280011322.01.T01:intron | 55.0% |
| ! | TTTGTAGCAGGGGGATTGGC+AGG | - | Chr2:82392964-82392983 | MsG0280011322.01.T01:intron | 55.0% |
| CCAATGGAGCAGCCATGCCA+CGG | + | Chr2:82392133-82392152 | None:intergenic | 60.0% | |
| GGACCCACTGCTTTGTACCG+TGG | - | Chr2:82392113-82392132 | MsG0280011322.01.T01:CDS | 60.0% | |
| GGCCTTCGCGGCATTTATCG+AGG | - | Chr2:82392817-82392836 | MsG0280011322.01.T01:intron | 60.0% | |
| ! | GCTGCTCCATTGGCCTCTGT+TGG | - | Chr2:82392140-82392159 | MsG0280011322.01.T01:CDS | 60.0% |
| !! | GCTTTAGGAGGACTCGGTGC+AGG | - | Chr2:82392658-82392677 | MsG0280011322.01.T01:intron | 60.0% |
| !! | GGTGGATTTGGAGGCACTGC+TGG | - | Chr2:82391990-82392009 | MsG0280011322.01.T01:CDS | 60.0% |
| CCGTGGCATGGCTGCTCCAT+TGG | - | Chr2:82392130-82392149 | MsG0280011322.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 82391933 | 82393224 | 82391933 | ID=MsG0280011322.01;Name=MsG0280011322.01 |
| Chr2 | mRNA | 82391933 | 82393224 | 82391933 | ID=MsG0280011322.01.T01;Parent=MsG0280011322.01;Name=MsG0280011322.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|2|0|297 |
| Chr2 | exon | 82392988 | 82393224 | 82392988 | ID=MsG0280011322.01.T01:exon:12447;Parent=MsG0280011322.01.T01 |
| Chr2 | exon | 82391933 | 82392589 | 82391933 | ID=MsG0280011322.01.T01:exon:12446;Parent=MsG0280011322.01.T01 |
| Chr2 | CDS | 82392988 | 82393224 | 82392988 | ID=MsG0280011322.01.T01:cds;Parent=MsG0280011322.01.T01 |
| Chr2 | CDS | 82391933 | 82392589 | 82391933 | ID=MsG0280011322.01.T01:cds;Parent=MsG0280011322.01.T01 |
| Gene Sequence |
| Protein sequence |
