AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025615.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025615.01.T01 MTR_5g049790 79.695 394 9 2 115 481 86 435 0.0 634
MsG0580025615.01.T01 MTR_5g031480 78.272 405 5 2 118 481 53 415 0.0 631
MsG0580025615.01.T01 MTR_5g049790 96.667 240 8 0 99 338 87 326 7.90e-175 494
MsG0580025615.01.T01 MTR_5g031480 83.453 278 5 1 118 354 53 330 1.69e-166 473
MsG0580025615.01.T01 MTR_5g031480 83.394 277 5 1 118 353 53 329 5.07e-166 472
MsG0580025615.01.T01 MTR_5g049790 97.321 224 6 0 115 338 86 309 1.30e-165 470
MsG0580025615.01.T01 MTR_7g085840 35.870 368 150 8 155 479 1 325 9.69e-68 220
MsG0580025615.01.T01 MTR_7g103260 30.469 384 176 7 139 475 52 391 1.72e-60 203
MsG0580025615.01.T01 MTR_7g103270 30.469 384 176 6 139 475 53 392 2.24e-58 198
MsG0580025615.01.T01 MTR_4g100730 29.604 429 190 10 101 474 158 529 4.92e-56 195
MsG0580025615.01.T01 MTR_1g061760 29.574 399 189 7 125 475 124 478 2.52e-54 189
MsG0580025615.01.T01 MTR_3g106690 32.021 381 163 8 151 480 55 390 3.58e-53 184
MsG0580025615.01.T01 MTR_4g115540 29.231 390 179 6 139 475 273 618 6.15e-53 189
MsG0580025615.01.T01 MTR_1g006600 29.716 387 174 10 138 473 240 579 1.20e-51 184
MsG0580025615.01.T01 MTR_4g115530 28.205 390 183 7 139 475 39 384 1.64e-51 180
MsG0580025615.01.T01 MTR_1g090733 31.234 381 166 8 141 473 208 540 4.08e-49 177
MsG0580025615.01.T01 MTR_7g103150 27.051 451 217 11 74 473 88 477 1.79e-48 174
MsG0580025615.01.T01 MTR_3g110200 28.941 387 177 7 138 473 244 583 5.41e-48 174
MsG0580025615.01.T01 MTR_3g081240 30.130 385 176 7 139 475 101 440 7.33e-48 171
MsG0580025615.01.T01 MTR_4g115530 28.075 374 172 7 155 475 1 330 7.37e-48 168
MsG0580025615.01.T01 MTR_3g097310 28.125 384 185 6 139 475 146 485 1.23e-47 172
MsG0580025615.01.T01 MTR_4g115460 29.442 394 181 10 139 480 113 461 5.92e-47 169
MsG0580025615.01.T01 MTR_3g110198 27.494 451 215 11 74 473 197 586 1.20e-46 171
MsG0580025615.01.T01 MTR_3g080690 28.831 385 181 7 139 475 99 438 7.51e-46 166
MsG0580025615.01.T01 MTR_5g094810 91.667 84 7 0 1 84 1241 1324 1.86e-42 162
MsG0580025615.01.T01 MTR_8g075940 86.905 84 11 0 1 84 99 182 8.10e-42 150
MsG0580025615.01.T01 MTR_8g102840 27.062 388 184 8 138 473 262 602 1.51e-41 157
MsG0580025615.01.T01 MTR_5g094830 89.286 84 9 0 1 84 1256 1339 4.68e-41 157
MsG0580025615.01.T01 MTR_5g094820 89.286 84 9 0 1 84 894 977 5.26e-41 157
MsG0580025615.01.T01 MTR_5g033030 88.095 84 10 0 1 84 1251 1334 6.13e-41 157
MsG0580025615.01.T01 MTR_5g033320 84.524 84 13 0 1 84 1241 1324 2.36e-39 152
MsG0580025615.01.T01 MTR_3g056705 79.762 84 17 0 1 84 1313 1396 2.60e-37 146
MsG0580025615.01.T01 MTR_3g056645 77.381 84 19 0 1 84 440 523 8.41e-37 144
MsG0580025615.01.T01 MTR_3g056700 76.190 84 20 0 1 84 1065 1148 1.34e-36 144
MsG0580025615.01.T01 MTR_3g056675 77.381 84 19 0 1 84 1012 1095 1.37e-36 144
MsG0580025615.01.T01 MTR_4g115540 33.491 212 124 4 139 335 273 482 4.41e-32 129
MsG0580025615.01.T01 MTR_1g069450 72.619 84 23 0 1 84 1289 1372 6.43e-32 130
MsG0580025615.01.T01 MTR_0874s0020 65.476 84 29 0 1 84 125 208 1.96e-30 122
MsG0580025615.01.T01 MTR_7g098690 72.619 84 23 0 1 84 1273 1356 2.64e-30 125
MsG0580025615.01.T01 MTR_5g081290 28.279 244 131 6 155 387 1 211 8.13e-30 117
MsG0580025615.01.T01 MTR_6g034335 71.084 83 24 0 1 83 1239 1321 1.23e-29 123
MsG0580025615.01.T01 MTR_6g034265 68.675 83 26 0 1 83 1232 1314 1.66e-29 123
MsG0580025615.01.T01 MTR_8g040620 64.286 84 30 0 1 84 1216 1299 2.18e-29 123
MsG0580025615.01.T01 MTR_8g009640 65.476 84 29 0 1 84 600 683 2.29e-29 122
MsG0580025615.01.T01 MTR_1g099280 66.265 83 28 0 1 83 1235 1317 2.44e-29 122
MsG0580025615.01.T01 MTR_1g099280 66.265 83 28 0 1 83 1260 1342 2.69e-29 122
MsG0580025615.01.T01 MTR_1g099280 66.265 83 28 0 1 83 1201 1283 2.76e-29 122
MsG0580025615.01.T01 MTR_6g034755 67.470 83 27 0 1 83 1242 1324 4.62e-29 122
MsG0580025615.01.T01 MTR_8g040170 61.905 84 32 0 1 84 1034 1117 5.31e-29 121
MsG0580025615.01.T01 MTR_8g040170 61.905 84 32 0 1 84 874 957 5.66e-29 121
MsG0580025615.01.T01 MTR_2g436710 63.095 84 31 0 1 84 1266 1349 8.72e-29 121
MsG0580025615.01.T01 MTR_6g034310 67.470 83 27 0 1 83 859 941 9.16e-29 120
MsG0580025615.01.T01 MTR_8g015970 63.095 84 31 0 1 84 1045 1128 9.31e-29 120
MsG0580025615.01.T01 MTR_6g034270 66.265 83 28 0 1 83 1051 1133 9.74e-29 120
MsG0580025615.01.T01 MTR_8g015970 63.095 84 31 0 1 84 1049 1132 1.01e-28 120
MsG0580025615.01.T01 MTR_8g015970 63.095 84 31 0 1 84 1045 1128 1.12e-28 120
MsG0580025615.01.T01 MTR_8g015970 63.095 84 31 0 1 84 1049 1132 1.15e-28 120
MsG0580025615.01.T01 MTR_8g042520 67.470 83 27 0 1 83 428 510 1.17e-28 120
MsG0580025615.01.T01 MTR_2g436730 63.095 84 31 0 1 84 1264 1347 1.28e-28 120
MsG0580025615.01.T01 MTR_6g034310 67.470 83 27 0 1 83 1217 1299 1.45e-28 120
MsG0580025615.01.T01 MTR_6g034310 67.470 83 27 0 1 83 1217 1299 1.49e-28 120
MsG0580025615.01.T01 MTR_6g034230 66.265 83 28 0 1 83 1234 1316 3.57e-28 119
MsG0580025615.01.T01 MTR_8g015980 60.714 84 33 0 1 84 1210 1293 8.36e-28 118
MsG0580025615.01.T01 MTR_8g016010 61.905 84 32 0 1 84 521 604 8.38e-28 117
MsG0580025615.01.T01 MTR_8g061970 61.905 84 32 0 1 84 1263 1346 1.27e-27 117
MsG0580025615.01.T01 MTR_8g016020 61.905 84 32 0 1 84 993 1076 1.29e-27 117
MsG0580025615.01.T01 MTR_0019s0020 65.060 83 29 0 1 83 1184 1266 1.30e-27 117
MsG0580025615.01.T01 MTR_0019s0020 65.060 83 29 0 1 83 1184 1266 1.32e-27 117
MsG0580025615.01.T01 MTR_0019s0020 65.060 83 29 0 1 83 1184 1266 1.38e-27 117
MsG0580025615.01.T01 MTR_2g436680 61.905 84 32 0 1 84 1263 1346 1.65e-27 117
MsG0580025615.01.T01 MTR_6g034350 63.855 83 30 0 1 83 1242 1324 1.91e-27 117
MsG0580025615.01.T01 MTR_6g034220 65.060 83 29 0 1 83 1233 1315 2.01e-27 117
MsG0580025615.01.T01 MTR_8g016070 60.714 84 33 0 1 84 1225 1308 3.02e-27 116
MsG0580025615.01.T01 MTR_8g080050 61.446 83 32 0 1 83 1203 1285 6.24e-26 112
MsG0580025615.01.T01 MTR_8g102840 31.416 226 140 6 138 353 262 482 4.76e-25 108
MsG0580025615.01.T01 MTR_0196s0020 66.265 83 28 0 1 83 1234 1316 1.69e-22 102
MsG0580025615.01.T01 MTR_6g084320 64.286 84 30 0 1 84 1182 1265 4.41e-22 100
MsG0580025615.01.T01 MTR_1g088680 61.905 84 32 0 1 84 1278 1361 1.28e-21 99.4
MsG0580025615.01.T01 MTR_4g057500 25.949 316 162 11 157 404 105 416 1.20e-20 94.7
MsG0580025615.01.T01 MTR_2g084245 25.312 320 165 9 154 404 84 398 1.40e-19 91.3
MsG0580025615.01.T01 MTR_8g096140 25.503 298 155 11 158 391 49 343 1.70e-17 84.7
MsG0580025615.01.T01 MTR_8g096160 25.503 298 155 11 158 391 49 343 2.67e-17 84.3
MsG0580025615.01.T01 MTR_2g019020 50.617 81 40 0 3 83 1244 1324 1.28e-16 83.6
MsG0580025615.01.T01 MTR_2g019020 50.617 81 40 0 3 83 789 869 1.34e-16 83.6
MsG0580025615.01.T01 MTR_2g019020 50.617 81 40 0 3 83 1007 1087 1.36e-16 83.6
MsG0580025615.01.T01 MTR_2g019020 50.617 81 40 0 3 83 1061 1141 1.43e-16 83.6
MsG0580025615.01.T01 MTR_2g019020 50.617 81 40 0 3 83 1244 1324 1.60e-16 83.2
MsG0580025615.01.T01 MTR_3g011840 48.148 81 42 0 3 83 1163 1243 1.94e-15 80.1
MsG0580025615.01.T01 MTR_3g011820 48.148 81 42 0 3 83 1280 1360 3.47e-15 79.3
MsG0580025615.01.T01 MTR_4g123990 35.135 111 67 2 11 117 394 503 2.19e-14 76.6
MsG0580025615.01.T01 MTR_4g124000 35.135 111 67 2 11 117 394 503 3.42e-14 75.9
MsG0580025615.01.T01 MTR_4g124000 35.135 111 67 2 11 117 394 503 4.12e-14 75.5
MsG0580025615.01.T01 MTR_2g105190 38.095 84 52 0 1 84 1241 1324 1.02e-13 74.3
MsG0580025615.01.T01 MTR_2g105190 38.095 84 52 0 1 84 1247 1330 1.07e-13 74.3
MsG0580025615.01.T01 MTR_1g059830 43.750 80 45 0 4 83 388 467 7.81e-13 71.2
MsG0580025615.01.T01 MTR_4g077930 37.805 82 49 1 7 86 386 467 1.97e-12 70.1
MsG0580025615.01.T01 MTR_4g077930 38.158 76 47 0 11 86 283 358 2.14e-12 70.1
MsG0580025615.01.T01 MTR_4g077930 38.158 76 47 0 11 86 392 467 2.40e-12 70.1
MsG0580025615.01.T01 MTR_3g107800 36.585 82 50 1 7 86 406 487 2.61e-12 70.1
MsG0580025615.01.T01 MTR_4g124040 36.842 76 48 0 11 86 212 287 3.14e-12 69.7
MsG0580025615.01.T01 MTR_4g124040 36.842 76 48 0 11 86 389 464 3.28e-12 69.7
MsG0580025615.01.T01 MTR_4g124040 36.842 76 48 0 11 86 444 519 3.37e-12 69.7
MsG0580025615.01.T01 MTR_3g086430 39.726 73 44 0 11 83 1017 1089 5.39e-12 68.9
MsG0580025615.01.T01 MTR_1g059830 43.421 76 43 0 4 79 388 463 1.16e-11 67.0
MsG0580025615.01.T01 MTR_1g086080 31.624 117 73 3 7 117 399 514 2.57e-11 66.6
MsG0580025615.01.T01 MTR_1g086150 32.479 117 72 3 7 117 394 509 2.68e-11 66.6
MsG0580025615.01.T01 MTR_3g080220 37.500 72 45 0 12 83 412 483 6.57e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025615.01.T01 AT4G38040 65.672 402 53 3 123 481 66 425 0.0 532
MsG0580025615.01.T01 AT4G38040 72.866 328 46 2 123 407 66 393 1.19e-171 489
MsG0580025615.01.T01 AT4G16745 28.780 410 194 7 118 473 159 524 1.30e-55 194
MsG0580025615.01.T01 AT5G03795 29.487 390 184 7 138 480 169 514 2.56e-55 193
MsG0580025615.01.T01 AT5G11610 31.159 414 188 10 110 473 172 538 1.37e-54 191
MsG0580025615.01.T01 AT5G11130 28.818 406 196 7 124 480 114 475 1.04e-51 182
MsG0580025615.01.T01 AT4G16745 31.161 353 187 6 118 416 159 509 4.54e-51 183
MsG0580025615.01.T01 AT5G11130 28.800 375 174 7 155 480 1 331 1.51e-49 173
MsG0580025615.01.T01 AT5G25310 28.788 396 180 8 139 480 131 478 5.33e-49 175
MsG0580025615.01.T01 AT3G07620 29.104 402 181 9 135 480 104 457 6.34e-49 174
MsG0580025615.01.T01 AT5G20260 29.744 390 174 11 139 475 117 459 3.71e-47 170
MsG0580025615.01.T01 AT5G20260 29.333 375 165 9 154 475 27 354 3.25e-46 164
MsG0580025615.01.T01 AT5G20260 29.144 374 165 9 155 475 1 327 1.81e-45 162
MsG0580025615.01.T01 AT4G32790 29.610 385 172 11 141 473 249 586 3.47e-45 167
MsG0580025615.01.T01 AT4G32790 29.610 385 172 11 141 473 249 586 3.47e-45 167
MsG0580025615.01.T01 AT4G32790 29.610 385 172 11 141 473 249 586 3.47e-45 167
MsG0580025615.01.T01 AT5G33290 26.700 397 183 7 139 475 144 492 4.14e-44 162
MsG0580025615.01.T01 AT5G25820 28.070 399 180 12 133 473 296 645 4.75e-43 162
MsG0580025615.01.T01 AT5G19670 26.905 420 196 10 106 473 240 600 5.17e-43 161
MsG0580025615.01.T01 AT5G19670 26.905 420 196 10 106 473 240 600 5.17e-43 161
MsG0580025615.01.T01 AT5G37000 27.990 393 182 11 141 480 208 552 4.35e-42 157
MsG0580025615.01.T01 AT3G42180 26.884 398 191 7 139 480 114 467 6.78e-42 155
MsG0580025615.01.T01 AT3G42180 26.963 382 179 7 155 480 1 338 2.03e-40 148
MsG0580025615.01.T01 AT3G13100 79.762 84 17 0 1 84 1001 1084 3.25e-37 146
MsG0580025615.01.T01 AT3G13100 79.762 84 17 0 1 84 1246 1329 3.55e-37 146
MsG0580025615.01.T01 AT5G11610 36.475 244 139 7 110 342 172 410 4.56e-37 142
MsG0580025615.01.T01 AT3G13080 77.381 84 19 0 1 84 1274 1357 9.44e-37 145
MsG0580025615.01.T01 AT3G13080 77.381 84 19 0 1 84 1274 1357 1.17e-36 145
MsG0580025615.01.T01 AT3G13090 78.571 84 18 0 1 84 1224 1307 8.79e-36 142
MsG0580025615.01.T01 AT1G04120 72.619 84 23 0 1 84 1238 1321 5.25e-32 130
MsG0580025615.01.T01 AT1G04120 72.619 84 23 0 1 84 1273 1356 5.28e-32 130
MsG0580025615.01.T01 AT1G04120 72.619 84 23 0 1 84 1273 1356 5.39e-32 130
MsG0580025615.01.T01 AT3G13080 74.324 74 19 0 1 74 1274 1347 4.34e-30 125
MsG0580025615.01.T01 AT3G60160 64.286 84 30 0 1 84 1260 1343 6.70e-30 124
MsG0580025615.01.T01 AT3G60160 64.286 84 30 0 1 84 1224 1307 6.77e-30 124
MsG0580025615.01.T01 AT3G60160 64.286 84 30 0 1 84 1260 1343 8.24e-30 124
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 804 886 6.67e-29 121
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 804 886 6.67e-29 121
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 1215 1297 6.70e-29 121
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 1209 1291 7.39e-29 121
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 1220 1302 7.41e-29 121
MsG0580025615.01.T01 AT3G21250 66.265 83 28 0 1 83 1226 1308 7.49e-29 121
MsG0580025615.01.T01 AT3G60970 63.095 84 31 0 1 84 807 890 1.41e-28 120
MsG0580025615.01.T01 AT3G59140 61.446 83 32 0 1 83 1212 1294 1.25e-27 117
MsG0580025615.01.T01 AT5G11610 37.736 159 90 4 110 261 172 328 5.63e-27 111
MsG0580025615.01.T01 AT2G47800 64.286 84 30 0 1 84 1279 1362 1.15e-22 102
MsG0580025615.01.T01 AT3G62700 64.286 84 30 0 1 84 1302 1385 3.24e-22 101
MsG0580025615.01.T01 AT1G27440 28.188 298 147 11 158 391 45 339 4.83e-20 92.4
MsG0580025615.01.T01 AT5G61840 25.839 298 154 11 158 391 48 342 3.34e-17 84.0
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1242 1322 6.66e-16 81.3
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1242 1322 6.76e-16 81.3
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1242 1322 6.76e-16 81.3
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1242 1322 6.76e-16 81.3
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1245 1325 6.89e-16 81.3
MsG0580025615.01.T01 AT1G30410 48.148 81 42 0 3 83 1127 1207 8.18e-16 81.3
MsG0580025615.01.T01 AT2G34660 48.148 81 42 0 3 83 1249 1329 1.59e-15 80.1
MsG0580025615.01.T01 AT2G34660 48.148 81 42 0 3 83 1249 1329 1.59e-15 80.1
MsG0580025615.01.T01 AT2G34660 48.148 81 42 0 3 83 962 1042 1.82e-15 80.1
MsG0580025615.01.T01 AT1G30420 46.914 81 43 0 3 83 1242 1322 3.40e-15 79.3
MsG0580025615.01.T01 AT1G30400 48.148 81 42 0 3 83 1244 1324 4.24e-15 79.0
MsG0580025615.01.T01 AT1G30400 48.148 81 42 0 3 83 1244 1324 4.24e-15 79.0
MsG0580025615.01.T01 AT2G07680 39.286 84 51 0 1 84 1096 1179 3.76e-14 75.9
MsG0580025615.01.T01 AT2G07680 39.286 84 51 0 1 84 1170 1253 4.16e-14 75.9
MsG0580025615.01.T01 AT2G07680 39.286 84 51 0 1 84 1173 1256 4.27e-14 75.9
MsG0580025615.01.T01 AT2G07680 39.286 84 51 0 1 84 1179 1262 4.31e-14 75.9
MsG0580025615.01.T01 AT2G07680 39.286 84 51 0 1 84 1195 1278 4.36e-14 75.9
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 8.98e-12 68.2
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.18e-11 67.8
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.18e-11 67.8
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.28e-11 67.8
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.42e-11 67.8
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.42e-11 67.8
MsG0580025615.01.T01 AT2G47000 32.727 110 69 2 12 117 401 509 1.42e-11 67.8
MsG0580025615.01.T01 AT5G22940 35.514 107 58 3 183 278 165 271 1.51e-11 67.0
MsG0580025615.01.T01 AT5G22940 35.514 107 58 3 183 278 136 242 1.58e-11 66.6
MsG0580025615.01.T01 AT1G27940 32.639 144 81 6 2 138 162 296 7.70e-11 65.1
MsG0580025615.01.T01 AT3G62150 37.333 75 47 0 12 86 420 494 7.71e-11 65.5
MsG0580025615.01.T01 AT3G62150 37.333 75 47 0 12 86 420 494 7.71e-11 65.5
MsG0580025615.01.T01 AT3G62150 37.333 75 47 0 12 86 420 494 7.71e-11 65.5
MsG0580025615.01.T01 AT1G27940 32.639 144 81 6 2 138 376 510 8.85e-11 65.1

Find 98 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGGACTAGTCTTGGATTT+TGG 0.099215 5:+21282906 MsG0580025615.01.T01:intron
GGTATTTCTTTCAGAATATT+AGG 0.147218 5:+21280800 MsG0580025615.01.T01:CDS
GGAGATGGAGAAGAAGTTTA+AGG 0.232399 5:+21280699 MsG0580025615.01.T01:CDS
TGATATCCAAGTATCCTTAT+TGG 0.235417 5:+21282136 MsG0580025615.01.T01:CDS
CAGCCATTTGCTCTTCCAGC+TGG 0.239781 5:+21282327 MsG0580025615.01.T01:CDS
CAGTCAAGAATATCATTAAA+AGG 0.337256 5:-21284458 None:intergenic
ATAGCAGATTCTATCCATTA+TGG 0.344223 5:+21283108 MsG0580025615.01.T01:CDS
GATGATGGCGGTGATGAATT+TGG 0.345348 5:+21280634 MsG0580025615.01.T01:CDS
AGCCATTTGCTCTTCCAGCT+GGG 0.353699 5:+21282328 MsG0580025615.01.T01:CDS
AACATCAACATTTCTAAAAT+CGG 0.353790 5:+21278276 MsG0580025615.01.T01:CDS
TCTACCACCTTCACAGTAAC+TGG 0.365125 5:-21280589 None:intergenic
CCCAGGGTTCTGTTCCAATA+AGG 0.369371 5:-21282150 None:intergenic
CGCATCTTATGACACGAAAT+AGG 0.375995 5:-21280874 None:intergenic
CAGACACCAAGGAAGCTTAC+TGG 0.379810 5:+21280760 MsG0580025615.01.T01:CDS
GTATTTCTTTCAGAATATTA+GGG 0.382720 5:+21280801 MsG0580025615.01.T01:CDS
ACTGGCATTGTTGGTAGAAC+AGG 0.388846 5:+21278180 MsG0580025615.01.T01:CDS
ACTGTGAAGGTGGTAGATTC+AGG 0.392685 5:+21280595 MsG0580025615.01.T01:CDS
TATATCCAGATGGGGATTCC+AGG 0.404196 5:+21280728 MsG0580025615.01.T01:CDS
CTCCACGAAATGTGCATGTC+AGG 0.416913 5:-21278149 None:intergenic
TACCAGGTATGCATCCATAA+TGG 0.418374 5:-21283122 None:intergenic
TTTGTCACTTGTCATGATGT+TGG 0.423218 5:+21282186 MsG0580025615.01.T01:CDS
TGAATCCAACATCATAGCTT+GGG 0.423551 5:-21282269 None:intergenic
TTTCGTGGAGGATTGAAAAC+TGG 0.433987 5:+21278162 MsG0580025615.01.T01:CDS
CAGATATGATGCTTTCCATA+TGG 0.436298 5:+21285077 MsG0580025615.01.T01:CDS
TCGGACTCTTGATCCTGATC+AGG 0.438095 5:+21280834 MsG0580025615.01.T01:CDS
TACTTCCCAGTAAGCTTCCT+TGG 0.443054 5:-21280766 None:intergenic
GCCATTTGCTCTTCCAGCTG+GGG 0.445515 5:+21282329 MsG0580025615.01.T01:CDS
TCTGTTCCAATAAGGATACT+TGG 0.446102 5:-21282142 None:intergenic
CCATTTGCTCTTCCAGCTGG+GGG 0.447883 5:+21282330 MsG0580025615.01.T01:CDS
CAAGTTGAATTTCGCGGAGA+TGG 0.448649 5:+21280684 MsG0580025615.01.T01:CDS
TGACTGGAGGCGAATTCCAC+TGG 0.454927 5:-21285056 None:intergenic
ATGGAATTCTTCACAAGTAA+TGG 0.456823 5:-21282231 None:intergenic
GTGGTTTGCAGGACTAGTCT+TGG 0.457735 5:+21282899 MsG0580025615.01.T01:intron
ATATTAGGGAGAGTCGGTTT+CGG 0.461762 5:+21280815 MsG0580025615.01.T01:CDS
AAAGTCCTGGAATCCCCATC+TGG 0.463244 5:-21280733 None:intergenic
AAATCGGACTGCATGATTTG+AGG 0.478545 5:+21278292 MsG0580025615.01.T01:CDS
CAAATGGCTGCAGGACTTGA+GGG 0.478640 5:-21282314 None:intergenic
GGCCTGACATGCACATTTCG+TGG 0.481054 5:+21278147 MsG0580025615.01.T01:CDS
ATATGGTTATGTATGACCTC+TGG 0.485109 5:+21285094 MsG0580025615.01.T01:CDS
TCCTTATTGGAACAGAACCC+TGG 0.489602 5:+21282149 MsG0580025615.01.T01:CDS
CGACTCTTTGAACCTACTGT+CGG 0.489866 5:+21278237 MsG0580025615.01.T01:CDS
CGTGTCAACTCAAACATTGT+TGG 0.489929 5:-21278342 None:intergenic
CATCTTCCGCTTGTGTTGCG+TGG 0.493249 5:+21278126 MsG0580025615.01.T01:CDS
GACTCTTTGAACCTACTGTC+GGG 0.493891 5:+21278238 MsG0580025615.01.T01:CDS
CTGGAAGAGCAAATGGCTGC+AGG 0.495189 5:-21282323 None:intergenic
ATCCATTATGGATGCATACC+TGG 0.496661 5:+21283120 MsG0580025615.01.T01:CDS
ATGAATCCAACATCATAGCT+TGG 0.499154 5:-21282270 None:intergenic
AAAATTTGCTGTTGTACTCA+AGG 0.500391 5:+21284484 MsG0580025615.01.T01:CDS
GTTGCAAATCTTGTTGATGC+AGG 0.501757 5:+21280445 MsG0580025615.01.T01:CDS
CAGGCACTTAGAATCAGTAT+TGG 0.507279 5:-21285134 None:intergenic
TGGGGAGCACACTGCTCGAA+TGG 0.507644 5:-21282250 None:intergenic
CTTGTCATGATGTTGGTGTA+AGG 0.509172 5:+21282193 MsG0580025615.01.T01:CDS
AGACACCAAGGAAGCTTACT+GGG 0.510018 5:+21280761 MsG0580025615.01.T01:CDS
GGATTGAAAACTGGCATTGT+TGG 0.513100 5:+21278171 MsG0580025615.01.T01:CDS
AGAGGTCATACATAACCATA+TGG 0.514924 5:-21285092 None:intergenic
AGGTTTATATATATCCAGAT+GGG 0.517065 5:+21280719 MsG0580025615.01.T01:CDS
TTAGGTGCCAGTTACTGTGA+AGG 0.521724 5:+21280582 MsG0580025615.01.T01:intron
ACTTCATAATAATTTAGTAA+AGG 0.526267 5:+21284568 MsG0580025615.01.T01:CDS
AGAAATATTTCAATGCGTCA+TGG 0.530174 5:+21284615 MsG0580025615.01.T01:CDS
GCATCAACAAGATTTGCAAC+TGG 0.530947 5:-21280442 None:intergenic
CGCAACACAAGCGGAAGATG+TGG 0.532172 5:-21278123 None:intergenic
GCAAATGGCTGCAGGACTTG+AGG 0.532900 5:-21282315 None:intergenic
AAGGTTTATATATATCCAGA+TGG 0.534390 5:+21280718 MsG0580025615.01.T01:CDS
AGTGTTCAAGTTGAATTTCG+CGG 0.535869 5:+21280678 MsG0580025615.01.T01:CDS
CAAAGAAGTGATCAGCACCC+AGG 0.545823 5:-21282167 None:intergenic
CAAGAATATCATTAAAAGGA+AGG 0.551765 5:-21284454 None:intergenic
TTCAGAATATTAGGGAGAGT+CGG 0.552683 5:+21280809 MsG0580025615.01.T01:CDS
AAAATTGAGGAGGAAGATGA+TGG 0.553667 5:+21280619 MsG0580025615.01.T01:CDS
TACTGGGAAGTATGCTAGTG+AGG 0.569154 5:+21280777 MsG0580025615.01.T01:CDS
CATAATTGTACAAAATTACG+TGG 0.574798 5:+21282107 MsG0580025615.01.T01:CDS
CGACAGTAGGTTCAAAGAGT+CGG 0.579142 5:-21278236 None:intergenic
TGGAAAGCATCATATCTGAC+TGG 0.580791 5:-21285072 None:intergenic
CCTTATTGGAACAGAACCCT+GGG 0.580833 5:+21282150 MsG0580025615.01.T01:CDS
AAAGAAGTGATCAGCACCCA+GGG 0.583211 5:-21282166 None:intergenic
ATTGTTGGTAGAACAGGTAG+TGG 0.583888 5:+21278186 MsG0580025615.01.T01:CDS
ACTGGGAAGTATGCTAGTGA+GGG 0.592010 5:+21280778 MsG0580025615.01.T01:CDS
CACTTAGAATCAGTATTGGA+TGG 0.592018 5:-21285130 None:intergenic
ATCAGTATTGGATGGTGTGA+TGG 0.596872 5:-21285122 None:intergenic
ATGATAACTTCCCCGACAGT+AGG 0.599330 5:-21278249 None:intergenic
TGCTCCCCAAGCTATGATGT+TGG 0.613997 5:+21282264 MsG0580025615.01.T01:CDS
GGTTTATATATATCCAGATG+GGG 0.618968 5:+21280720 MsG0580025615.01.T01:CDS
CATTTGCTCTTCCAGCTGGG+GGG 0.620252 5:+21282331 MsG0580025615.01.T01:CDS
AGATTCAGAAACACTTCCAG+TGG 0.620947 5:+21285040 MsG0580025615.01.T01:CDS
TTGTCATGATGTTGGTGTAA+GGG 0.623878 5:+21282194 MsG0580025615.01.T01:CDS
GTGTCATAAGATGCGTGGAA+AGG 0.628562 5:+21280882 MsG0580025615.01.T01:CDS
ATTTCGTGTCATAAGATGCG+TGG 0.629023 5:+21280877 MsG0580025615.01.T01:CDS
GTCAGGCCACGCAACACAAG+CGG 0.636016 5:-21278132 None:intergenic
AAATTCAACTTGAACACTCG+TGG 0.636153 5:-21280673 None:intergenic
GGTGCCAGTTACTGTGAAGG+TGG 0.636651 5:+21280585 MsG0580025615.01.T01:intron
GGGAGAGCAACATCTTTGTG+TGG 0.642873 5:-21282294 None:intergenic
GAATCCAACATCATAGCTTG+GGG 0.643262 5:-21282268 None:intergenic
GTTGGTGTAAGGGCAACAGA+AGG 0.660182 5:+21282204 MsG0580025615.01.T01:CDS
ACTCTTTGAACCTACTGTCG+GGG 0.662284 5:+21278239 MsG0580025615.01.T01:CDS
ATTGAGGAGGAAGATGATGG+CGG 0.663938 5:+21280622 MsG0580025615.01.T01:CDS
AAAGCATCATATCTGACTGG+AGG 0.688393 5:-21285069 None:intergenic
CTGACATGCACATTTCGTGG+AGG 0.689715 5:+21278150 MsG0580025615.01.T01:CDS
CTGGGAAGTATGCTAGTGAG+GGG 0.707626 5:+21280779 MsG0580025615.01.T01:CDS
TGGTGTGATGGCGTAACCAG+AGG 0.723147 5:-21285110 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAATATCATATAATT+AGG - Chr5:21283962-21283981 None:intergenic 10.0%
!! CAAAAAATATCATATAATTA+GGG - Chr5:21283961-21283980 None:intergenic 10.0%
!!! AAGTGTATTTTATTTTTTTT+GGG - Chr5:21284724-21284743 None:intergenic 10.0%
!!! ATTATTTATTTTTGAGTAAA+TGG + Chr5:21280044-21280063 MsG0580025615.01.T01:intron 10.0%
!!! TAAGTGTATTTTATTTTTTT+TGG - Chr5:21284725-21284744 None:intergenic 10.0%
!! AAAAAATAGTTTAAAGACTA+TGG + Chr5:21284755-21284774 MsG0580025615.01.T01:intron 15.0%
!! AAAAAGTTAATATGTAAAGT+TGG + Chr5:21284959-21284978 MsG0580025615.01.T01:intron 15.0%
!! AAAAATAGAAAATTTGGAAA+TGG - Chr5:21280380-21280399 None:intergenic 15.0%
!! AAAATAGAAAATTTGGAAAT+GGG - Chr5:21280379-21280398 None:intergenic 15.0%
!! ACCATATTTATATAGTATTA+AGG - Chr5:21279111-21279130 None:intergenic 15.0%
!! ACTTCATAATAATTTAGTAA+AGG + Chr5:21284568-21284587 MsG0580025615.01.T01:CDS 15.0%
!! AGTATAATAATCTAGATAAA+TGG - Chr5:21282423-21282442 None:intergenic 15.0%
!! ATAAGATAAACAAATATTGT+TGG + Chr5:21282793-21282812 MsG0580025615.01.T01:intron 15.0%
!! ATATAATTTAGTGTAATCAT+AGG - Chr5:21278371-21278390 None:intergenic 15.0%
!! CTAGATTATTATACTAAAAT+TGG + Chr5:21282428-21282447 MsG0580025615.01.T01:intron 15.0%
!! TATAAATAGAATTTATGTCT+TGG - Chr5:21278835-21278854 None:intergenic 15.0%
!! TCAAATTATAATTTGAAAGA+TGG + Chr5:21279259-21279278 MsG0580025615.01.T01:intron 15.0%
!! TCCTTAATACTATATAAATA+TGG + Chr5:21279107-21279126 MsG0580025615.01.T01:intron 15.0%
!! TTAAAATAATTAGAAGAAAC+TGG - Chr5:21279075-21279094 None:intergenic 15.0%
!!! AAATTATCAAATTTTCACAA+TGG - Chr5:21282878-21282897 None:intergenic 15.0%
!!! AATTATTAGTTGATAAAAAG+TGG + Chr5:21278797-21278816 MsG0580025615.01.T01:intron 15.0%
!!! AATTCAATTATTTGTTGATA+TGG + Chr5:21284983-21285002 MsG0580025615.01.T01:intron 15.0%
!!! AGTGTATTTTATTTTTTTTG+GGG - Chr5:21284723-21284742 None:intergenic 15.0%
!!! CACCATTTTAAAATATTATA+AGG - Chr5:21279637-21279656 None:intergenic 15.0%
!!! CACCTTATAATATTTTAAAA+TGG + Chr5:21279632-21279651 MsG0580025615.01.T01:intron 15.0%
!!! CTAAATTTTGCATTTTTTTA+CGG + Chr5:21280519-21280538 MsG0580025615.01.T01:intron 15.0%
!!! GTTTAATTATTTCTTCATAT+CGG + Chr5:21278497-21278516 MsG0580025615.01.T01:intron 15.0%
!!! TAAGAAGTGTAATTAATATT+AGG + Chr5:21283997-21284016 MsG0580025615.01.T01:intron 15.0%
!!! TTTAGAAAAAAAATCACTTT+TGG - Chr5:21280020-21280039 None:intergenic 15.0%
!!! TTTTTAACCTTTTAATTTTG+TGG + Chr5:21283163-21283182 MsG0580025615.01.T01:intron 15.0%
!!! TTTTTTTTTGTTACAATGTT+TGG - Chr5:21279964-21279983 None:intergenic 15.0%
!! AAAAAAAAGTAAATCTGAAG+AGG - Chr5:21282380-21282399 None:intergenic 20.0%
!! AAATATCATATAATTAGGGA+CGG - Chr5:21283957-21283976 None:intergenic 20.0%
!! AAGGTTAAAAAATATCAGAA+AGG - Chr5:21283154-21283173 None:intergenic 20.0%
!! AATAATCACTTATTTGTTCA+TGG + Chr5:21281426-21281445 MsG0580025615.01.T01:intron 20.0%
!! ATGATTGATTATTTGTGAAA+TGG + Chr5:21279388-21279407 MsG0580025615.01.T01:intron 20.0%
!! ATGATTTGACAATAAACTAA+AGG + Chr5:21279741-21279760 MsG0580025615.01.T01:intron 20.0%
!! CTAAGAAACAAAAAACAAAA+GGG - Chr5:21280566-21280585 None:intergenic 20.0%
!! GAGGAATATATAAGATATAA+TGG - Chr5:21279045-21279064 None:intergenic 20.0%
!! GATAATCTTAAAATATACTC+AGG - Chr5:21278661-21278680 None:intergenic 20.0%
!! GTATTTCTTTCAGAATATTA+GGG + Chr5:21280801-21280820 MsG0580025615.01.T01:CDS 20.0%
!! TCATCGAAAAATAGAAAATT+TGG - Chr5:21280386-21280405 None:intergenic 20.0%
!! TCCAAAATGACTTATAATTT+GGG + Chr5:21284084-21284103 MsG0580025615.01.T01:intron 20.0%
!!! AACATCAACATTTCTAAAAT+CGG + Chr5:21278276-21278295 MsG0580025615.01.T01:CDS 20.0%
!!! ACAATGTTTGGTTTTTATTT+TGG - Chr5:21279952-21279971 None:intergenic 20.0%
!!! AGTAAACCATATTTGTTTTT+TGG + Chr5:21278702-21278721 MsG0580025615.01.T01:intron 20.0%
!!! AGTTTTGGTATATTTTTAGT+GGG - Chr5:21281751-21281770 None:intergenic 20.0%
!!! CATCAATAACTTATTACTTT+TGG - Chr5:21278975-21278994 None:intergenic 20.0%
!!! CATTTTTTTACGGTTTTTTA+TGG + Chr5:21280529-21280548 MsG0580025615.01.T01:intron 20.0%
!!! GAAAGTTTATTAATTTTACG+TGG + Chr5:21279461-21279480 MsG0580025615.01.T01:intron 20.0%
!!! GATTCGTTATATTTTTATTC+AGG - Chr5:21281253-21281272 None:intergenic 20.0%
!!! GGTTTTTTATGGTTTTTTTA+TGG + Chr5:21280540-21280559 MsG0580025615.01.T01:intron 20.0%
!!! GTGAAAATTTGATAATTTTG+TGG + Chr5:21282880-21282899 MsG0580025615.01.T01:intron 20.0%
!!! GTGTATTTTATTTTTTTTGG+GGG - Chr5:21284722-21284741 None:intergenic 20.0%
!!! TATATTTTTATTCAGGAGTA+GGG - Chr5:21281246-21281265 None:intergenic 20.0%
!!! TGTTGATATATAATTTGTTC+TGG + Chr5:21282818-21282837 MsG0580025615.01.T01:intron 20.0%
!!! TTATATTTTTATTCAGGAGT+AGG - Chr5:21281247-21281266 None:intergenic 20.0%
! AAATGACTTATAATTTGGGA+TGG + Chr5:21284088-21284107 MsG0580025615.01.T01:intron 25.0%
! AAGGTTTATATATATCCAGA+TGG + Chr5:21280718-21280737 MsG0580025615.01.T01:CDS 25.0%
! AAGTAGTAATTATTACTCCA+AGG - Chr5:21282666-21282685 None:intergenic 25.0%
! AAGTATATGTTCAATTGGAT+AGG - Chr5:21284190-21284209 None:intergenic 25.0%
! ACTTATTTGAACTTATCTAC+TGG - Chr5:21283407-21283426 None:intergenic 25.0%
! AGAAACAACAAAAAACCAAA+AGG - Chr5:21280410-21280429 None:intergenic 25.0%
! AGGTAAATTTAACATGACAA+AGG - Chr5:21283444-21283463 None:intergenic 25.0%
! AGGTTTATATATATCCAGAT+GGG + Chr5:21280719-21280738 MsG0580025615.01.T01:CDS 25.0%
! ATAATCTAGATAAATGGAAG+AGG - Chr5:21282417-21282436 None:intergenic 25.0%
! ATCCAATTGAACATATACTT+GGG + Chr5:21284190-21284209 MsG0580025615.01.T01:intron 25.0%
! CAAGAATATCATTAAAAGGA+AGG - Chr5:21284457-21284476 None:intergenic 25.0%
! CAGTAAATTTACAGCTAAAA+AGG + Chr5:21281960-21281979 MsG0580025615.01.T01:intron 25.0%
! CAGTCAAGAATATCATTAAA+AGG - Chr5:21284461-21284480 None:intergenic 25.0%
! CATAATTGTACAAAATTACG+TGG + Chr5:21282107-21282126 MsG0580025615.01.T01:CDS 25.0%
! CATTCTCCAAAAAACAAATA+TGG - Chr5:21278711-21278730 None:intergenic 25.0%
! CCTAAGAAACAAAAAACAAA+AGG - Chr5:21280567-21280586 None:intergenic 25.0%
! CTAACTTTGTTAATGTATAG+TGG + Chr5:21278947-21278966 MsG0580025615.01.T01:intron 25.0%
! CTCCAAAATGACTTATAATT+TGG + Chr5:21284083-21284102 MsG0580025615.01.T01:intron 25.0%
! GAAACAACAAAAAACCAAAA+GGG - Chr5:21280409-21280428 None:intergenic 25.0%
! GAATGGACAAAAAAAAACAA+GGG - Chr5:21278898-21278917 None:intergenic 25.0%
! GACAATAAACTAAAGGTTAA+AGG + Chr5:21279748-21279767 MsG0580025615.01.T01:intron 25.0%
! GCAAAATTTAGAAATGTGTT+GGG - Chr5:21280510-21280529 None:intergenic 25.0%
! GGTATTTCTTTCAGAATATT+AGG + Chr5:21280800-21280819 MsG0580025615.01.T01:CDS 25.0%
! GTGACATTTAAACTATAACT+TGG + Chr5:21284287-21284306 MsG0580025615.01.T01:intron 25.0%
! TAAGCAACCACAAAATTAAA+AGG - Chr5:21283173-21283192 None:intergenic 25.0%
! TAAGTGATTATTTCCATCTT+AGG - Chr5:21281418-21281437 None:intergenic 25.0%
! TATCCAATTGAACATATACT+TGG + Chr5:21284189-21284208 MsG0580025615.01.T01:intron 25.0%
! TATTTATAACCTATGAAGCA+CGG - Chr5:21278463-21278482 None:intergenic 25.0%
! TCAAAAGTGATTATAGAAGT+CGG - Chr5:21279925-21279944 None:intergenic 25.0%
! TCTCAAATTATTATCTGTGT+CGG + Chr5:21278396-21278415 MsG0580025615.01.T01:intron 25.0%
! TGAATGGACAAAAAAAAACA+AGG - Chr5:21278899-21278918 None:intergenic 25.0%
! TGCAAAATTTAGAAATGTGT+TGG - Chr5:21280511-21280530 None:intergenic 25.0%
! TGGAAGATTTAAAAGTGAAT+TGG - Chr5:21279879-21279898 None:intergenic 25.0%
! TGTTATTCTTTGCTTATGTT+TGG - Chr5:21279993-21280012 None:intergenic 25.0%
! TTAGTGGAAAATTGTAGTAA+TGG + Chr5:21281332-21281351 MsG0580025615.01.T01:intron 25.0%
! TTTAACATTACGAACATTGT+GGG + Chr5:21282628-21282647 MsG0580025615.01.T01:intron 25.0%
!! AAAGAAATTAGTGACAGTTT+TGG - Chr5:21281766-21281785 None:intergenic 25.0%
!! AGCAACATTTTTCATATCTT+GGG - Chr5:21282697-21282716 None:intergenic 25.0%
!! ATGATTAGTCATTTAGTTGT+GGG + Chr5:21278597-21278616 MsG0580025615.01.T01:intron 25.0%
!! ATTCGTTTTACTATCATTCT+TGG - Chr5:21279899-21279918 None:intergenic 25.0%
!! ATTTCAAAATTTGTTTGACC+TGG + Chr5:21282605-21282624 MsG0580025615.01.T01:intron 25.0%
!! CACGTAATTTTGTACAATTA+TGG - Chr5:21282109-21282128 None:intergenic 25.0%
!! CTTTTAATGATATTCTTGAC+TGG + Chr5:21284459-21284478 MsG0580025615.01.T01:CDS 25.0%
!! TATGATTAGTCATTTAGTTG+TGG + Chr5:21278596-21278615 MsG0580025615.01.T01:intron 25.0%
!! TCAATTATTTGTTGATATGG+TGG + Chr5:21284986-21285005 MsG0580025615.01.T01:intron 25.0%
!! TCCCAAATTATAAGTCATTT+TGG - Chr5:21284088-21284107 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - Chr5:21283284-21283303 None:intergenic 25.0%
!! TTGGTTCAAATTATGTTTTG+TGG + Chr5:21282447-21282466 MsG0580025615.01.T01:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + Chr5:21283910-21283929 MsG0580025615.01.T01:intron 25.0%
!!! AAACAATACTTTTTCTCACT+AGG + Chr5:21282753-21282772 MsG0580025615.01.T01:intron 25.0%
!!! AAGTTTTAGAATGTTTAGCT+TGG + Chr5:21282001-21282020 MsG0580025615.01.T01:intron 25.0%
!!! ATTTGTTGTATATCGGTTAT+TGG + Chr5:21283467-21283486 MsG0580025615.01.T01:intron 25.0%
!!! CAGTTTTGGTATATTTTTAG+TGG - Chr5:21281752-21281771 None:intergenic 25.0%
!!! CCTTTTGTTTTTTGTTTCTT+AGG + Chr5:21280564-21280583 MsG0580025615.01.T01:intron 25.0%
!!! CTTTATTGCTTGGTTTTTAA+TGG + Chr5:21280932-21280951 MsG0580025615.01.T01:intron 25.0%
!!! TATATTTTTAGTGGGTAACA+TGG - Chr5:21281743-21281762 None:intergenic 25.0%
!!! TTAGATTGTAGTTTTGTCTT+GGG + Chr5:21281667-21281686 MsG0580025615.01.T01:intron 25.0%
!!! TTGGTTTTTTGTTGTTTCTT+AGG + Chr5:21280411-21280430 MsG0580025615.01.T01:intron 25.0%
AAAGCACAACATTACAAATG+TGG - Chr5:21280916-21280935 None:intergenic 30.0%
AAGGTTAATCAGTATGGAAA+AGG - Chr5:21283517-21283536 None:intergenic 30.0%
AATCAGTATGGAAAAGGATA+GGG - Chr5:21283511-21283530 None:intergenic 30.0%
AATGTTCGTAATGTTAAACC+AGG - Chr5:21282626-21282645 None:intergenic 30.0%
ACATGATACTTATTCCTGAA+TGG + Chr5:21283251-21283270 MsG0580025615.01.T01:intron 30.0%
AGAAATATTTCAATGCGTCA+TGG + Chr5:21284615-21284634 MsG0580025615.01.T01:CDS 30.0%
AGAGCACATCTTATAATGTT+TGG + Chr5:21281589-21281608 MsG0580025615.01.T01:intron 30.0%
AGATGATGTTGAACAATCAA+GGG - Chr5:21279140-21279159 None:intergenic 30.0%
AGTAGCATTTAATGCTTCAT+TGG + Chr5:21284023-21284042 MsG0580025615.01.T01:intron 30.0%
ATAGCAGATTCTATCCATTA+TGG + Chr5:21283108-21283127 MsG0580025615.01.T01:CDS 30.0%
ATGGAATTCTTCACAAGTAA+TGG - Chr5:21282234-21282253 None:intergenic 30.0%
ATGTCAAATACCAACTATAG+TGG - Chr5:21283741-21283760 None:intergenic 30.0%
ATTATAAGGTGATGCTTACT+TGG - Chr5:21279623-21279642 None:intergenic 30.0%
CTGTGAGTAAGTTTAGATAA+AGG - Chr5:21282541-21282560 None:intergenic 30.0%
GAGTAAATGGAAAAAAGAAG+AGG + Chr5:21280057-21280076 MsG0580025615.01.T01:intron 30.0%
GGTTTATATATATCCAGATG+GGG + Chr5:21280720-21280739 MsG0580025615.01.T01:CDS 30.0%
GTTTAACATTACGAACATTG+TGG + Chr5:21282627-21282646 MsG0580025615.01.T01:intron 30.0%
TAATCAGTATGGAAAAGGAT+AGG - Chr5:21283512-21283531 None:intergenic 30.0%
TACTATAGATATCGTTGCTA+TGG - Chr5:21281857-21281876 None:intergenic 30.0%
TAGAAAATTTGGAAATGGGT+TGG - Chr5:21280375-21280394 None:intergenic 30.0%
TAGATGATGTTGAACAATCA+AGG - Chr5:21279141-21279160 None:intergenic 30.0%
TATATGTTCAATTGGATAGG+TGG - Chr5:21284187-21284206 None:intergenic 30.0%
TCACAAAAGGTTAATCAGTA+TGG - Chr5:21283523-21283542 None:intergenic 30.0%
TGATATCCAAGTATCCTTAT+TGG + Chr5:21282136-21282155 MsG0580025615.01.T01:CDS 30.0%
TGCTGTAAATATAGCTAAAC+AGG + Chr5:21281462-21281481 MsG0580025615.01.T01:intron 30.0%
TGTAGTGCGACTTATAATTT+GGG + Chr5:21284049-21284068 MsG0580025615.01.T01:intron 30.0%
TTATTTCCATCTCAGAATCA+GGG - Chr5:21281907-21281926 None:intergenic 30.0%
TTCTACTTAATACCCTAGTA+GGG - Chr5:21281080-21281099 None:intergenic 30.0%
TTGTAGTGCGACTTATAATT+TGG + Chr5:21284048-21284067 MsG0580025615.01.T01:intron 30.0%
TTGTTCATGGTTTATTACCA+TGG + Chr5:21281439-21281458 MsG0580025615.01.T01:intron 30.0%
! ACTTATTCCTGAATGGTTTT+TGG + Chr5:21283258-21283277 MsG0580025615.01.T01:intron 30.0%
! AGAAAATTTGGAAATGGGTT+GGG - Chr5:21280374-21280393 None:intergenic 30.0%
! AGCATTGTCATTTGTCATAT+AGG - Chr5:21283220-21283239 None:intergenic 30.0%
! ATCTGTTGTTATGGTGTTTT+GGG + Chr5:21278523-21278542 MsG0580025615.01.T01:intron 30.0%
! ATTGACGATTTGCAATTTTG+TGG + Chr5:21279333-21279352 MsG0580025615.01.T01:intron 30.0%
! CAGCAACATTTTTCATATCT+TGG - Chr5:21282698-21282717 None:intergenic 30.0%
! CTTTTGCTTATAATAGTGAC+CGG - Chr5:21283820-21283839 None:intergenic 30.0%
! GGTCGAAGTACTTTATTATT+GGG + Chr5:21284132-21284151 MsG0580025615.01.T01:intron 30.0%
! GTCATGGTTAAATTTTACTC+TGG + Chr5:21284631-21284650 MsG0580025615.01.T01:CDS 30.0%
! TAATGTTGTGCTTTATTGCT+TGG + Chr5:21280922-21280941 MsG0580025615.01.T01:intron 30.0%
! TAGTGCTGTAAAATCTTTTC+TGG - Chr5:21283045-21283064 None:intergenic 30.0%
! TATCTGTTGTTATGGTGTTT+TGG + Chr5:21278522-21278541 MsG0580025615.01.T01:intron 30.0%
! TTATCTAAAATGTTGCCAAG+AGG + Chr5:21278676-21278695 MsG0580025615.01.T01:intron 30.0%
! TTTATGTGCATCATGTTTTC+TGG + Chr5:21278573-21278592 MsG0580025615.01.T01:CDS 30.0%
!! AAAATTTGCTGTTGTACTCA+AGG + Chr5:21284484-21284503 MsG0580025615.01.T01:CDS 30.0%
!! ACCTTGCATTTGTTGTATAT+CGG + Chr5:21283460-21283479 MsG0580025615.01.T01:intron 30.0%
!! ATTTTGTTTACCTGAGATGA+AGG - Chr5:21280340-21280359 None:intergenic 30.0%
!! GTGGGTTTTAATATTTTCCT+TGG + Chr5:21282646-21282665 MsG0580025615.01.T01:intron 30.0%
!! TATCGGTTTATCTGTTGTTA+TGG + Chr5:21278514-21278533 MsG0580025615.01.T01:intron 30.0%
!! TTGATAATTTTGTGGTTTGC+AGG + Chr5:21282888-21282907 MsG0580025615.01.T01:intron 30.0%
!! TTTAGAATGTTTAGCTTGGA+TGG + Chr5:21282005-21282024 MsG0580025615.01.T01:intron 30.0%
!! TTTTGAGGATTTGTTTAAGC+TGG - Chr5:21284523-21284542 None:intergenic 30.0%
!! TTTTGTTTACCTGAGATGAA+GGG - Chr5:21280339-21280358 None:intergenic 30.0%
!!! AATACTTTTTCTCACTAGGT+GGG + Chr5:21282757-21282776 MsG0580025615.01.T01:intron 30.0%
!!! AGGAGTAGGGTTTTAAATAA+AGG - Chr5:21281233-21281252 None:intergenic 30.0%
!!! CTTAGATTGTAGTTTTGTCT+TGG + Chr5:21281666-21281685 MsG0580025615.01.T01:intron 30.0%
!!! GTTTTTTGGAGAATGTTAAC+CGG + Chr5:21278716-21278735 MsG0580025615.01.T01:intron 30.0%
!!! TTGTTGTTGATTTTGCTTCA+CGG - Chr5:21280218-21280237 None:intergenic 30.0%
AAAATTGAGGAGGAAGATGA+TGG + Chr5:21280619-21280638 MsG0580025615.01.T01:CDS 35.0%
AAAGAAGAGTGAGAATTGCT+AGG - Chr5:21280285-21280304 None:intergenic 35.0%
AAATTCAACTTGAACACTCG+TGG - Chr5:21280676-21280695 None:intergenic 35.0%
AAGAAGAGTGAGAATTGCTA+GGG - Chr5:21280284-21280303 None:intergenic 35.0%
AAGCTATAACCTATGAAGCA+CGG + Chr5:21279173-21279192 MsG0580025615.01.T01:intron 35.0%
AAGTATACGTGCAATTCGAT+CGG - Chr5:21284248-21284267 None:intergenic 35.0%
AATCCTCAAAAACAAATCGC+AGG + Chr5:21284532-21284551 MsG0580025615.01.T01:CDS 35.0%
AATCTGTGTCACCAAATCTA+AGG + Chr5:21281269-21281288 MsG0580025615.01.T01:intron 35.0%
AATGTAGTCAGTCTCATGTT+TGG + Chr5:21281557-21281576 MsG0580025615.01.T01:intron 35.0%
AATTCACACCTTAGAATAGG+CGG - Chr5:21281789-21281808 None:intergenic 35.0%
ACATGGAAATTGTTATGCTG+TGG + Chr5:21281189-21281208 MsG0580025615.01.T01:intron 35.0%
ACCGATATACAACAAATGCA+AGG - Chr5:21283464-21283483 None:intergenic 35.0%
AGAGGTCATACATAACCATA+TGG - Chr5:21285095-21285114 None:intergenic 35.0%
AGATTCAGGAAAAATTGAGG+AGG + Chr5:21280609-21280628 MsG0580025615.01.T01:CDS 35.0%
AGTTATTCTTGCACGTGTAT+GGG + Chr5:21282955-21282974 MsG0580025615.01.T01:intron 35.0%
ATATGGTTATGTATGACCTC+TGG + Chr5:21285094-21285113 MsG0580025615.01.T01:CDS 35.0%
ATATGGTTTACTTCTCCTCT+TGG - Chr5:21278694-21278713 None:intergenic 35.0%
ATCAGAAAGGTTTACTTACC+AGG - Chr5:21283141-21283160 None:intergenic 35.0%
ATCGTTTCACGAAACAATAG+TGG + Chr5:21283776-21283795 MsG0580025615.01.T01:intron 35.0%
ATCTGTGTCACCAAATCTAA+GGG + Chr5:21281270-21281289 MsG0580025615.01.T01:intron 35.0%
ATGAATCCAACATCATAGCT+TGG - Chr5:21282273-21282292 None:intergenic 35.0%
ATGGCTAAGTTTCTACTTCT+AGG + Chr5:21282024-21282043 MsG0580025615.01.T01:intron 35.0%
ATTATTTCCATCTTAGGAGC+AGG - Chr5:21281412-21281431 None:intergenic 35.0%
ATTTCTTTCCGCCTATTCTA+AGG + Chr5:21281778-21281797 MsG0580025615.01.T01:intron 35.0%
CAACTATAGTGGCACTATAA+CGG - Chr5:21283730-21283749 None:intergenic 35.0%
CACCCAAGTATATGTTCAAT+TGG - Chr5:21284195-21284214 None:intergenic 35.0%
CAGATATGATGCTTTCCATA+TGG + Chr5:21285077-21285096 MsG0580025615.01.T01:CDS 35.0%
CTGTAAAAATCTTGATGCTG+TGG + Chr5:21281643-21281662 MsG0580025615.01.T01:intron 35.0%
CTTCTACTTAATACCCTAGT+AGG - Chr5:21281081-21281100 None:intergenic 35.0%
GAAGAAGATGATGATTCAGA+TGG - Chr5:21280172-21280191 None:intergenic 35.0%
GGAAAAAAGAAGAGGAAAAC+AGG + Chr5:21280065-21280084 MsG0580025615.01.T01:intron 35.0%
GGTAGATTCAGGAAAAATTG+AGG + Chr5:21280606-21280625 MsG0580025615.01.T01:CDS 35.0%
TAGCTATATTTACAGCACCA+TGG - Chr5:21281459-21281478 None:intergenic 35.0%
TCACGATTCTCTGTAAATCA+AGG - Chr5:21281128-21281147 None:intergenic 35.0%
TCATCACTCTTCAGTATGTT+AGG + Chr5:21284684-21284703 MsG0580025615.01.T01:intron 35.0%
TCTACTTAATACCCTAGTAG+GGG - Chr5:21281079-21281098 None:intergenic 35.0%
TCTCTGTAAATCAAGGATCA+CGG - Chr5:21281121-21281140 None:intergenic 35.0%
TCTGTTCCAATAAGGATACT+TGG - Chr5:21282145-21282164 None:intergenic 35.0%
TGAATCCAACATCATAGCTT+GGG - Chr5:21282272-21282291 None:intergenic 35.0%
TGAGTATTTGAGGGAAAGAT+AGG - Chr5:21280314-21280333 None:intergenic 35.0%
TGTTCTGACATTGAGATGAA+TGG - Chr5:21278915-21278934 None:intergenic 35.0%
TTATTTCCATCTTAGGAGCA+GGG - Chr5:21281411-21281430 None:intergenic 35.0%
TTCAGAATATTAGGGAGAGT+CGG + Chr5:21280809-21280828 MsG0580025615.01.T01:CDS 35.0%
TTGTCATGATGTTGGTGTAA+GGG + Chr5:21282194-21282213 MsG0580025615.01.T01:CDS 35.0%
TTTGTTTACCTGAGATGAAG+GGG - Chr5:21280338-21280357 None:intergenic 35.0%
! AAGATTTAGAATGTCTAGCC+TGG + Chr5:21281503-21281522 MsG0580025615.01.T01:intron 35.0%
! AGATGTAATGGTTGATGTGA+AGG - Chr5:21283548-21283567 None:intergenic 35.0%
! CTTCCTTTTTATTGTGCTGA+GGG + Chr5:21283575-21283594 MsG0580025615.01.T01:intron 35.0%
! GACTTATAATTTGGGATGGA+CGG + Chr5:21284092-21284111 MsG0580025615.01.T01:intron 35.0%
! GGGTCGAAGTACTTTATTAT+TGG + Chr5:21284131-21284150 MsG0580025615.01.T01:intron 35.0%
! GTCTTGGGCTTTTTATCAAA+AGG + Chr5:21281682-21281701 MsG0580025615.01.T01:intron 35.0%
! GTTACAAGAGCACAAGATTT+AGG - Chr5:21281885-21281904 None:intergenic 35.0%
! GTTATTTCCATCTCAGAATC+AGG - Chr5:21281908-21281927 None:intergenic 35.0%
! TTCCTTTTTATTGTGCTGAG+GGG + Chr5:21283576-21283595 MsG0580025615.01.T01:intron 35.0%
! TTTGTCACTTGTCATGATGT+TGG + Chr5:21282186-21282205 MsG0580025615.01.T01:CDS 35.0%
!! AAAACAAGGGTCTTGTTAAC+CGG - Chr5:21278885-21278904 None:intergenic 35.0%
!! AACATGACAAAGGACTAGTT+TGG - Chr5:21283434-21283453 None:intergenic 35.0%
!! AGTGTTCAAGTTGAATTTCG+CGG + Chr5:21280678-21280697 MsG0580025615.01.T01:CDS 35.0%
!! CTATTTTTCGATGACCCTTT+TGG + Chr5:21280392-21280411 MsG0580025615.01.T01:intron 35.0%
!! GTATTTTTGCATCTGGTTAG+TGG + Chr5:21281316-21281335 MsG0580025615.01.T01:intron 35.0%
!! GTTCATGATTTGTTACCATG+AGG + Chr5:21281937-21281956 MsG0580025615.01.T01:intron 35.0%
!! GTTTCGTGTATTTTTGCATC+TGG + Chr5:21281309-21281328 MsG0580025615.01.T01:intron 35.0%
!!! CAATACTTTTTCTCACTAGG+TGG + Chr5:21282756-21282775 MsG0580025615.01.T01:intron 35.0%
AAAAACAGATGAGCCTGATC+AGG - Chr5:21280850-21280869 None:intergenic 40.0%
AAATCGGACTGCATGATTTG+AGG + Chr5:21278292-21278311 MsG0580025615.01.T01:CDS 40.0%
AACATGGCATAGAGGACATT+CGG - Chr5:21281727-21281746 None:intergenic 40.0%
AACATGGCCAAAAACCATTC+AGG - Chr5:21283268-21283287 None:intergenic 40.0%
AATGTAGTCAAACTCATGCC+TGG + Chr5:21282050-21282069 MsG0580025615.01.T01:intron 40.0%
AATGTCACGCGTGTAACAAT+TGG - Chr5:21284275-21284294 None:intergenic 40.0%
ACATCCCAAGTTCATCCTTA+AGG - Chr5:21284361-21284380 None:intergenic 40.0%
ACTCCTAAACTGTGATTCCA+AGG - Chr5:21283632-21283651 None:intergenic 40.0%
ACTTGGTCACAATTGTACTG+TGG + Chr5:21281158-21281177 MsG0580025615.01.T01:intron 40.0%
AGATTCAGAAACACTTCCAG+TGG + Chr5:21285040-21285059 MsG0580025615.01.T01:CDS 40.0%
AGTTTAGGAGTCCTTAGCTA+AGG + Chr5:21283641-21283660 MsG0580025615.01.T01:intron 40.0%
ATCCATTATGGATGCATACC+TGG + Chr5:21283120-21283139 MsG0580025615.01.T01:CDS 40.0%
ATCCCCTCAGCACAATAAAA+AGG - Chr5:21283581-21283600 None:intergenic 40.0%
ATGAAGGGGTTGAGTATTTG+AGG - Chr5:21280324-21280343 None:intergenic 40.0%
ATGTCACGCGTGTAACAATT+GGG - Chr5:21284274-21284293 None:intergenic 40.0%
ATTTCGTGTCATAAGATGCG+TGG + Chr5:21280877-21280896 MsG0580025615.01.T01:CDS 40.0%
CACAATTCACCCCTTAGATT+TGG - Chr5:21281283-21281302 None:intergenic 40.0%
CACTAAGTTTGTATATGCCC+TGG + Chr5:21283060-21283079 MsG0580025615.01.T01:intron 40.0%
CACTGTTTCAACCTTAGCTA+AGG - Chr5:21283655-21283674 None:intergenic 40.0%
CAGAGAATCGTGATCAAATG+CGG + Chr5:21281135-21281154 MsG0580025615.01.T01:intron 40.0%
CATCCCAAGTTCATCCTTAA+GGG - Chr5:21284360-21284379 None:intergenic 40.0%
CATTCTATTCTACCTCGAAG+CGG - Chr5:21281541-21281560 None:intergenic 40.0%
CCTCAGCACAATAAAAAGGA+AGG - Chr5:21283577-21283596 None:intergenic 40.0%
CGCAATTCACACCTTAGAAT+AGG - Chr5:21281792-21281811 None:intergenic 40.0%
CGCATCTTATGACACGAAAT+AGG - Chr5:21280877-21280896 None:intergenic 40.0%
CGTGTCAACTCAAACATTGT+TGG - Chr5:21278345-21278364 None:intergenic 40.0%
CGTTAATGCATACTGCTTAG+TGG + Chr5:21284926-21284945 MsG0580025615.01.T01:intron 40.0%
CTTGTCATGATGTTGGTGTA+AGG + Chr5:21282193-21282212 MsG0580025615.01.T01:CDS 40.0%
GAAGAAGCTTTGCTTGTCAA+TGG - Chr5:21280129-21280148 None:intergenic 40.0%
GAATCCAACATCATAGCTTG+GGG - Chr5:21282271-21282290 None:intergenic 40.0%
GAGTTATTCTTGCACGTGTA+TGG + Chr5:21282954-21282973 MsG0580025615.01.T01:intron 40.0%
GCATCAACAAGATTTGCAAC+TGG - Chr5:21280445-21280464 None:intergenic 40.0%
GCTGTAAATTTACTGCCTCA+TGG - Chr5:21281955-21281974 None:intergenic 40.0%
GGAAGGATTGCAAGATGTAA+TGG - Chr5:21283560-21283579 None:intergenic 40.0%
GGAGATGGAGAAGAAGTTTA+AGG + Chr5:21280699-21280718 MsG0580025615.01.T01:CDS 40.0%
GGATTGAAAACTGGCATTGT+TGG + Chr5:21278171-21278190 MsG0580025615.01.T01:CDS 40.0%
GGGGGAATGATGTAGAAAAT+AGG + Chr5:21282349-21282368 MsG0580025615.01.T01:CDS 40.0%
GTTGCAAATCTTGTTGATGC+AGG + Chr5:21280445-21280464 MsG0580025615.01.T01:CDS 40.0%
GTTTCGTGTCAATCTTGTTG+TGG + Chr5:21282514-21282533 MsG0580025615.01.T01:intron 40.0%
TAAGTTTGTATATGCCCTGG+TGG + Chr5:21283063-21283082 MsG0580025615.01.T01:intron 40.0%
TACCAGGTATGCATCCATAA+TGG - Chr5:21283125-21283144 None:intergenic 40.0%
TACTGGCATAAACACTTGTG+AGG - Chr5:21283390-21283409 None:intergenic 40.0%
TACTTGGAACCTTGTATGCA+AGG - Chr5:21279607-21279626 None:intergenic 40.0%
TAGTAGGGGAACAATGCATA+AGG - Chr5:21281065-21281084 None:intergenic 40.0%
TATGCATTGTTCCCCTACTA+GGG + Chr5:21281065-21281084 MsG0580025615.01.T01:intron 40.0%
TATTAACCTGTGATCCACCA+GGG - Chr5:21283080-21283099 None:intergenic 40.0%
TCATGCCTGGATATTATGCA+GGG + Chr5:21282063-21282082 MsG0580025615.01.T01:intron 40.0%
TCTGTGTCACCAAATCTAAG+GGG + Chr5:21281271-21281290 MsG0580025615.01.T01:intron 40.0%
TGAAGGGGTTGAGTATTTGA+GGG - Chr5:21280323-21280342 None:intergenic 40.0%
TGATGTGAAGGCTTCACAAA+AGG - Chr5:21283536-21283555 None:intergenic 40.0%
TGATTGAAGCCTTGCATACA+AGG + Chr5:21279595-21279614 MsG0580025615.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr5:21283914-21283933 MsG0580025615.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr5:21283933-21283914 None:intergenic 40.0%
TGGTGTCTGATAAAAAGTCC+TGG - Chr5:21280749-21280768 None:intergenic 40.0%
TTAAAACCCTGCTCCTAAGA+TGG + Chr5:21281402-21281421 MsG0580025615.01.T01:intron 40.0%
TTAGCTTCAGGTCAGTTACA+CGG - Chr5:21284400-21284419 None:intergenic 40.0%
TTATGCATTGTTCCCCTACT+AGG + Chr5:21281064-21281083 MsG0580025615.01.T01:intron 40.0%
TTGCCCTTAAGGATGAACTT+GGG + Chr5:21284354-21284373 MsG0580025615.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr5:21283913-21283932 MsG0580025615.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr5:21283932-21283913 None:intergenic 40.0%
TTTCGTGGAGGATTGAAAAC+TGG + Chr5:21278162-21278181 MsG0580025615.01.T01:CDS 40.0%
TTTGTGTTTAACCAATGCCC+CGG - Chr5:21278747-21278766 None:intergenic 40.0%
! AAAGCATCATATCTGACTGG+AGG - Chr5:21285072-21285091 None:intergenic 40.0%
! ACGGAGTATTTGACAACACT+GGG + Chr5:21284111-21284130 MsG0580025615.01.T01:intron 40.0%
! ATATTAGGGAGAGTCGGTTT+CGG + Chr5:21280815-21280834 MsG0580025615.01.T01:CDS 40.0%
! ATTGTTGGTAGAACAGGTAG+TGG + Chr5:21278186-21278205 MsG0580025615.01.T01:CDS 40.0%
! CCTTCCTTTTTATTGTGCTG+AGG + Chr5:21283574-21283593 MsG0580025615.01.T01:intron 40.0%
! CGTTATAGTGCCACTATAGT+TGG + Chr5:21283728-21283747 MsG0580025615.01.T01:intron 40.0%
! CTGCAAACAACATTAGCTTC+AGG - Chr5:21284412-21284431 None:intergenic 40.0%
! GGACTTTTTATCAGACACCA+AGG + Chr5:21280749-21280768 MsG0580025615.01.T01:CDS 40.0%
! TTGTAACCCTGATTCTGAGA+TGG + Chr5:21281898-21281917 MsG0580025615.01.T01:intron 40.0%
! TTTTATTGTGCTGAGGGGAT+GGG + Chr5:21283581-21283600 MsG0580025615.01.T01:intron 40.0%
! TTTTTATTGTGCTGAGGGGA+TGG + Chr5:21283580-21283599 MsG0580025615.01.T01:intron 40.0%
!! TGGAAAGCATCATATCTGAC+TGG - Chr5:21285075-21285094 None:intergenic 40.0%
!!! CAGGACTAGTCTTGGATTTT+GGG + Chr5:21282907-21282926 MsG0580025615.01.T01:intron 40.0%
!!! CATCCTGCGATTTGTTTTTG+AGG - Chr5:21284538-21284557 None:intergenic 40.0%
!!! CTTAGGAGCAGGGTTTTAAA+AGG - Chr5:21281401-21281420 None:intergenic 40.0%
!!! GAATGGTTTTTGGCCATGTT+TGG + Chr5:21283268-21283287 MsG0580025615.01.T01:intron 40.0%
AAAGAAGTGATCAGCACCCA+GGG - Chr5:21282169-21282188 None:intergenic 45.0%
AAAGGTCCAAACCCAGATCT+GGG - Chr5:21281215-21281234 None:intergenic 45.0%
AACCGAATCAGTAGAGCTAC+CGG + Chr5:21283007-21283026 MsG0580025615.01.T01:intron 45.0%
AAGCGGACACTTAAACATCC+AGG - Chr5:21281524-21281543 None:intergenic 45.0%
ACAGTGTTGTCAAACGCAGA+TGG + Chr5:21283669-21283688 MsG0580025615.01.T01:intron 45.0%
ACTCTGATGTGTTGCCCTTA+AGG + Chr5:21284343-21284362 MsG0580025615.01.T01:intron 45.0%
ACTCTTTGAACCTACTGTCG+GGG + Chr5:21278239-21278258 MsG0580025615.01.T01:CDS 45.0%
ACTGTGAAGGTGGTAGATTC+AGG + Chr5:21280595-21280614 MsG0580025615.01.T01:CDS 45.0%
AGACACCAAGGAAGCTTACT+GGG + Chr5:21280761-21280780 MsG0580025615.01.T01:CDS 45.0%
ATACTCAACCCCTTCATCTC+AGG + Chr5:21280327-21280346 MsG0580025615.01.T01:intron 45.0%
ATCGTGATCAAATGCGGACT+TGG + Chr5:21281141-21281160 MsG0580025615.01.T01:intron 45.0%
ATGAAGCACGGACACTAACA+CGG - Chr5:21278451-21278470 None:intergenic 45.0%
ATGATAACTTCCCCGACAGT+AGG - Chr5:21278252-21278271 None:intergenic 45.0%
ATGTGCCCTGCATAATATCC+AGG - Chr5:21282071-21282090 None:intergenic 45.0%
ATGTTTAAGTGTCCGCTTCG+AGG + Chr5:21281526-21281545 MsG0580025615.01.T01:intron 45.0%
CACTCTTCAGTATGTTAGGC+TGG + Chr5:21284688-21284707 MsG0580025615.01.T01:intron 45.0%
CATATAATTAGGGACGGAGC+AGG - Chr5:21283951-21283970 None:intergenic 45.0%
CCTTATTGGAACAGAACCCT+GGG + Chr5:21282150-21282169 MsG0580025615.01.T01:CDS 45.0%
CGACAGTAGGTTCAAAGAGT+CGG - Chr5:21278239-21278258 None:intergenic 45.0%
CGACTCTTTGAACCTACTGT+CGG + Chr5:21278237-21278256 MsG0580025615.01.T01:CDS 45.0%
CTATTAACCTGTGATCCACC+AGG - Chr5:21283081-21283100 None:intergenic 45.0%
CTCATGCCTGGATATTATGC+AGG + Chr5:21282062-21282081 MsG0580025615.01.T01:intron 45.0%
GACTCTTTGAACCTACTGTC+GGG + Chr5:21278238-21278257 MsG0580025615.01.T01:CDS 45.0%
GAGTGAGAATTGCTAGGGTT+AGG - Chr5:21280279-21280298 None:intergenic 45.0%
GATTTCCTTTGCTCTGTACG+AGG + Chr5:21279432-21279451 MsG0580025615.01.T01:intron 45.0%
GTACTGTGGTTTCAGCAACA+TGG + Chr5:21281172-21281191 MsG0580025615.01.T01:intron 45.0%
GTGCCTTGGAATCACAGTTT+AGG + Chr5:21283626-21283645 MsG0580025615.01.T01:intron 45.0%
GTGTCATAAGATGCGTGGAA+AGG + Chr5:21280882-21280901 MsG0580025615.01.T01:CDS 45.0%
GTTGCCCTTAAGGATGAACT+TGG + Chr5:21284353-21284372 MsG0580025615.01.T01:intron 45.0%
TAAAGGTCCAAACCCAGATC+TGG - Chr5:21281216-21281235 None:intergenic 45.0%
TACTTCCCAGTAAGCTTCCT+TGG - Chr5:21280769-21280788 None:intergenic 45.0%
TATATCCAGATGGGGATTCC+AGG + Chr5:21280728-21280747 MsG0580025615.01.T01:CDS 45.0%
TATGAAGCACGGACACTCAT+CGG + Chr5:21279184-21279203 MsG0580025615.01.T01:intron 45.0%
TCCTTATTGGAACAGAACCC+TGG + Chr5:21282149-21282168 MsG0580025615.01.T01:CDS 45.0%
TCTACCACCTTCACAGTAAC+TGG - Chr5:21280592-21280611 None:intergenic 45.0%
TGTTAGTGTCCGTGCTTCAT+AGG + Chr5:21278451-21278470 MsG0580025615.01.T01:intron 45.0%
TTAGGTGCCAGTTACTGTGA+AGG + Chr5:21280582-21280601 MsG0580025615.01.T01:intron 45.0%
TTGTGTTTAACCAATGCCCC+GGG - Chr5:21278746-21278765 None:intergenic 45.0%
TTTATTGTGCTGAGGGGATG+GGG + Chr5:21283582-21283601 MsG0580025615.01.T01:intron 45.0%
! ACTGGCATTGTTGGTAGAAC+AGG + Chr5:21278180-21278199 MsG0580025615.01.T01:CDS 45.0%
! ACTGGGAAGTATGCTAGTGA+GGG + Chr5:21280778-21280797 MsG0580025615.01.T01:CDS 45.0%
! AGAAGAAACTGGCTAGCTAG+AGG - Chr5:21279064-21279083 None:intergenic 45.0%
! ATTGAGGAGGAAGATGATGG+CGG + Chr5:21280622-21280641 MsG0580025615.01.T01:CDS 45.0%
! CAAGTTGAATTTCGCGGAGA+TGG + Chr5:21280684-21280703 MsG0580025615.01.T01:CDS 45.0%
! GACGGAGTATTTGACAACAC+TGG + Chr5:21284110-21284129 MsG0580025615.01.T01:intron 45.0%
! TACTGGGAAGTATGCTAGTG+AGG + Chr5:21280777-21280796 MsG0580025615.01.T01:CDS 45.0%
! TAGTGGGTAACATGGCATAG+AGG - Chr5:21281735-21281754 None:intergenic 45.0%
! TATTATCTGTGTCGGCGTGT+TGG + Chr5:21278404-21278423 MsG0580025615.01.T01:intron 45.0%
! TTTCTGGTACACTAGATGCC+CGG - Chr5:21283029-21283048 None:intergenic 45.0%
!! GATGATGGCGGTGATGAATT+TGG + Chr5:21280634-21280653 MsG0580025615.01.T01:CDS 45.0%
!! GTGGAATACAAAGAGTGCCT+TGG + Chr5:21283612-21283631 MsG0580025615.01.T01:intron 45.0%
!! GTTATGGTGTTTTGGGCTGA+AGG + Chr5:21278530-21278549 MsG0580025615.01.T01:intron 45.0%
!!! ACTAGTCTTGGATTTTGGGC+TGG + Chr5:21282911-21282930 MsG0580025615.01.T01:CDS 45.0%
!!! GCAGGACTAGTCTTGGATTT+TGG + Chr5:21282906-21282925 MsG0580025615.01.T01:intron 45.0%
!! ATATTATATTAATTCTTAAA+GGG - Chr5:21284855-21284874 None:intergenic 5.0%
!! TATATTATATTAATTCTTAA+AGG - Chr5:21284856-21284875 None:intergenic 5.0%
AAAGTCCTGGAATCCCCATC+TGG - Chr5:21280736-21280755 None:intergenic 50.0%
AATAGTGACCGGAGGGAGTA+TGG - Chr5:21283940-21283921 None:intergenic 50.0%
ACCGAATCAGTAGAGCTACC+GGG + Chr5:21283008-21283027 MsG0580025615.01.T01:intron 50.0%
ACGGACACTAACACGGACAT+CGG - Chr5:21278444-21278463 None:intergenic 50.0%
AGATTCCTTAACCAGTGCCC+CGG + Chr5:21278854-21278873 MsG0580025615.01.T01:intron 50.0%
AGCCATTTGCTCTTCCAGCT+GGG + Chr5:21282328-21282347 MsG0580025615.01.T01:CDS 50.0%
CAAAGAAGTGATCAGCACCC+AGG - Chr5:21282170-21282189 None:intergenic 50.0%
CAAATGGCTGCAGGACTTGA+GGG - Chr5:21282317-21282336 None:intergenic 50.0%
CACAACCTCGTACAGAGCAA+AGG - Chr5:21279440-21279459 None:intergenic 50.0%
CACACTCTCTTCTCTCTTCG+TGG + Chr5:21280247-21280266 MsG0580025615.01.T01:intron 50.0%
CACGAAGAGAGAAGAGAGTG+TGG - Chr5:21280249-21280268 None:intergenic 50.0%
CAGACACCAAGGAAGCTTAC+TGG + Chr5:21280760-21280779 MsG0580025615.01.T01:CDS 50.0%
CCCAGGGTTCTGTTCCAATA+AGG - Chr5:21282153-21282172 None:intergenic 50.0%
CTCCACGAAATGTGCATGTC+AGG - Chr5:21278152-21278171 None:intergenic 50.0%
CTGACATGCACATTTCGTGG+AGG + Chr5:21278150-21278169 MsG0580025615.01.T01:CDS 50.0%
GAATAGGCGTGTCCTGGTAT+CGG + Chr5:21279206-21279225 MsG0580025615.01.T01:intron 50.0%
GATGAGTGTCCGTGCTTCAT+AGG - Chr5:21279185-21279204 None:intergenic 50.0%
GGGAGAGCAACATCTTTGTG+TGG - Chr5:21282297-21282316 None:intergenic 50.0%
GTTGGTGTAAGGGCAACAGA+AGG + Chr5:21282204-21282223 MsG0580025615.01.T01:CDS 50.0%
TCGGACTCTTGATCCTGATC+AGG + Chr5:21280834-21280853 MsG0580025615.01.T01:CDS 50.0%
TGCTCCCCAAGCTATGATGT+TGG + Chr5:21282264-21282283 MsG0580025615.01.T01:CDS 50.0%
TGTGTTTAACCAATGCCCCG+GGG - Chr5:21278745-21278764 None:intergenic 50.0%
TTATGCTGTGGCCCAGATCT+GGG + Chr5:21281201-21281220 MsG0580025615.01.T01:intron 50.0%
TTATTGTGCTGAGGGGATGG+GGG + Chr5:21283583-21283602 MsG0580025615.01.T01:intron 50.0%
! CTGGGAAGTATGCTAGTGAG+GGG + Chr5:21280779-21280798 MsG0580025615.01.T01:CDS 50.0%
! TATATGCCCTGGTGGATCAC+AGG + Chr5:21283071-21283090 MsG0580025615.01.T01:intron 50.0%
!! GTGGTTTGCAGGACTAGTCT+TGG + Chr5:21282899-21282918 MsG0580025615.01.T01:intron 50.0%
AGAATGTTAACCGGTGCCCC+CGG + Chr5:21278725-21278744 MsG0580025615.01.T01:intron 55.0%
ATTCCTTAACCAGTGCCCCG+GGG + Chr5:21278856-21278875 MsG0580025615.01.T01:intron 55.0%
CAGCCATTTGCTCTTCCAGC+TGG + Chr5:21282327-21282346 MsG0580025615.01.T01:CDS 55.0%
CATCTTCCGCTTGTGTTGCG+TGG + Chr5:21278126-21278145 MsG0580025615.01.T01:CDS 55.0%
CATTTGCTCTTCCAGCTGGG+GGG + Chr5:21282331-21282350 MsG0580025615.01.T01:CDS 55.0%
CCATTTGCTCTTCCAGCTGG+GGG + Chr5:21282330-21282349 MsG0580025615.01.T01:CDS 55.0%
CGCAACACAAGCGGAAGATG+TGG - Chr5:21278126-21278145 None:intergenic 55.0%
CTGGAAGAGCAAATGGCTGC+AGG - Chr5:21282326-21282345 None:intergenic 55.0%
GATTCCTTAACCAGTGCCCC+GGG + Chr5:21278855-21278874 MsG0580025615.01.T01:intron 55.0%
GCAAATGGCTGCAGGACTTG+AGG - Chr5:21282318-21282337 None:intergenic 55.0%
GCACGGACACTCATCGGAAT+AGG + Chr5:21279190-21279209 MsG0580025615.01.T01:intron 55.0%
GCCATTTGCTCTTCCAGCTG+GGG + Chr5:21282329-21282348 MsG0580025615.01.T01:CDS 55.0%
GGCCTGACATGCACATTTCG+TGG + Chr5:21278147-21278166 MsG0580025615.01.T01:CDS 55.0%
GGTGCCAGTTACTGTGAAGG+TGG + Chr5:21280585-21280604 MsG0580025615.01.T01:intron 55.0%
GTGTTACGCCATACTCCCTC+CGG + Chr5:21283798-21283817 MsG0580025615.01.T01:intron 55.0%
GTGTTTAACCAATGCCCCGG+GGG - Chr5:21278744-21278763 None:intergenic 55.0%
GTTATGCTGTGGCCCAGATC+TGG + Chr5:21281200-21281219 MsG0580025615.01.T01:intron 55.0%
TCATCGGAATAGGCGTGTCC+TGG + Chr5:21279200-21279219 MsG0580025615.01.T01:intron 55.0%
TCTACATCATTCCCCCCAGC+TGG - Chr5:21282345-21282364 None:intergenic 55.0%
TGACTGGAGGCGAATTCCAC+TGG - Chr5:21285059-21285078 None:intergenic 55.0%
TGTAACGCGTGTCCGATACC+AGG - Chr5:21279221-21279240 None:intergenic 55.0%
! GCCCGGTAGCTCTACTGATT+CGG - Chr5:21283012-21283031 None:intergenic 55.0%
! TGGTGTGATGGCGTAACCAG+AGG - Chr5:21285113-21285132 None:intergenic 55.0%
AATGTTAACCGGTGCCCCCG+GGG + Chr5:21278727-21278746 MsG0580025615.01.T01:intron 60.0%
CAGGTAGCTGCTACTCCCTC+CGG - Chr5:21283932-21283951 None:intergenic 60.0%
CCCCCAGCTGGAAGAGCAAA+TGG - Chr5:21282333-21282352 None:intergenic 60.0%
CTGTGGCCCAGATCTGGGTT+TGG + Chr5:21281206-21281225 MsG0580025615.01.T01:intron 60.0%
GAATGTTAACCGGTGCCCCC+GGG + Chr5:21278726-21278745 MsG0580025615.01.T01:intron 60.0%
GTCAGGCCACGCAACACAAG+CGG - Chr5:21278135-21278154 None:intergenic 60.0%
TCTTGTTAACCGGTGCCCCC+GGG - Chr5:21278875-21278894 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + Chr5:21278857-21278876 MsG0580025615.01.T01:intron 60.0%
! GTCTTGTTAACCGGTGCCCC+CGG - Chr5:21278876-21278895 None:intergenic 60.0%
! TGGGGAGCACACTGCTCGAA+TGG - Chr5:21282253-21282272 None:intergenic 60.0%
!! GAGGGGATGGGGGTTAGTTG+TGG + Chr5:21283593-21283612 MsG0580025615.01.T01:intron 60.0%
CTTGTTAACCGGTGCCCCCG+GGG - Chr5:21278874-21278893 None:intergenic 65.0%
! AACCAATGCCCCGGGGGCAC+CGG - Chr5:21278738-21278757 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - Chr5:21278862-21278881 None:intergenic 70.0%
AACCGGTGCCCCCGGGGCAT+TGG + Chr5:21278733-21278752 MsG0580025615.01.T01:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+CGG + Chr5:21278863-21278882 MsG0580025615.01.T01:intron 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - Chr5:21278868-21278887 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 21278105 21285143 21278105 ID=MsG0580025615.01;Name=MsG0580025615.01
Chr5 mRNA 21278105 21285143 21278105 ID=MsG0580025615.01.T01;Parent=MsG0580025615.01;Name=MsG0580025615.01.T01;_AED=0.43;_eAED=0.46;_QI=0|0.5|0.33|0.88|0.75|0.66|9|0|481
Chr5 exon 21278105 21278355 21278105 ID=MsG0580025615.01.T01:exon:23587;Parent=MsG0580025615.01.T01
Chr5 exon 21278552 21278594 21278552 ID=MsG0580025615.01.T01:exon:23588;Parent=MsG0580025615.01.T01
Chr5 exon 21280433 21280483 21280433 ID=MsG0580025615.01.T01:exon:23589;Parent=MsG0580025615.01.T01
Chr5 exon 21280586 21280903 21280586 ID=MsG0580025615.01.T01:exon:23590;Parent=MsG0580025615.01.T01
Chr5 exon 21282084 21282370 21282084 ID=MsG0580025615.01.T01:exon:23591;Parent=MsG0580025615.01.T01
Chr5 exon 21282910 21282970 21282910 ID=MsG0580025615.01.T01:exon:23592;Parent=MsG0580025615.01.T01
Chr5 exon 21283093 21283141 21283093 ID=MsG0580025615.01.T01:exon:23593;Parent=MsG0580025615.01.T01
Chr5 exon 21284432 21284696 21284432 ID=MsG0580025615.01.T01:exon:23594;Parent=MsG0580025615.01.T01
Chr5 exon 21285023 21285143 21285023 ID=MsG0580025615.01.T01:exon:23595;Parent=MsG0580025615.01.T01
Chr5 CDS 21278105 21278355 21278105 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21278552 21278594 21278552 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21280433 21280483 21280433 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21280586 21280903 21280586 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21282084 21282370 21282084 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21282910 21282970 21282910 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21283093 21283141 21283093 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21284432 21284696 21284432 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Chr5 CDS 21285023 21285143 21285023 ID=MsG0580025615.01.T01:cds;Parent=MsG0580025615.01.T01
Gene Sequence

>MsG0580025615.01.T01

ATGAAGGTTCGTTACGCTCCACATCTTCCGCTTGTGTTGCGTGGCCTGACATGCACATTTCGTGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGTGGAAAATCAACTCTTATACAGACACTTTTCCGACTCTTTGAACCTACTGTCGGGGAAGTTATCATTGACAACATCAACATTTCTAAAATCGGACTGCATGATTTGAGGTCTAAACTAAGCATTATTTCGCAAGATCCAACAATGTTTGAGTGTAATGCTTCTTTAGCATCTTTATGTGCATCATGTTTTCTGGTGTCAGTACCAGTTGCAAATCTTGTTGATGCAGGAAAAAATGTAGACGAAGTGCCAGTTACTGTGAAGGTGGTAGATTCAGGAAAAATTGAGGAGGAAGATGATGGCGGTGATGAATTTGGTGATGTGTATCATTCGCCACGAGTGTTCAAGTTGAATTTCGCGGAGATGGAGAAGAAGTTTAAGGTTTATATATATCCAGATGGGGATTCCAGGACTTTTTATCAGACACCAAGGAAGCTTACTGGGAAGTATGCTAGTGAGGGGTATTTCTTTCAGAATATTAGGGAGAGTCGGTTTCGGACTCTTGATCCTGATCAGGCTCATCTGTTTTTCATTCCTATTTCGTGTCATAAGATGCGTGGAAAGGGCACATCTTATGAGAATATGACCATAATTGTACAAAATTACGTGGAAAGCTTGATATCCAAGTATCCTTATTGGAACAGAACCCTGGGTGCTGATCACTTCTTTGTCACTTGTCATGATGTTGGTGTAAGGGCAACAGAAGGACTTCCATTACTTGTGAAGAATTCCATTCGAGCAGTGTGCTCCCCAAGCTATGATGTTGGATTCATTCCACACAAAGATGTTGCTCTCCCTCAAGTCCTGCAGCCATTTGCTCTTCCAGCTGGGGGGAATGATGTAGAAAATAGGACTAGTCTTGGATTTTGGGCTGGTCATCGTAACTCTAAAATTAGAGTTATTCTTGCACGTGTTAATAGTGCTCGAATAGCAGATTCTATCCATTATGGATGCATACCTGTGATATTGTCAAATTACTATGACCTTCCTTTTAATGATATTCTTGACTGGAGAAAATTTGCTGTTGTACTCAAGGAGAGCGATGTATACCAGCTTAAACAAATCCTCAAAAACAAATCGCAGGATGAGTTTGTTGCACTTCATAATAATTTAGTAAAGGTGATCTTCTCATTACTGTATTTCAAGAAATATTTCAATGCGTCATGGTTAAATTTTACTCTGGAATTTTTTATTATCTATGTCTTTTATAAAGTCATCACTCTTCAATGTATCATCTTGTATCAGATTCAGAAACACTTCCAGTGGAATTCGCCTCCAGTCAGATATGATGCTTTCCATATGGTTATGTATGACCTCTGGTTACGCCATCACACCATCCAATACTGA
Protein sequence

>MsG0580025615.01.T01

MKVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLFEPTVGEVIIDNINISKIGLHDLRSKLSIISQDPTMFECNASLASLCASCFLVSVPVANLVDAGKNVDEVPVTVKVVDSGKIEEEDDGGDEFGDVYHSPRVFKLNFAEMEKKFKVYIYPDGDSRTFYQTPRKLTGKYASEGYFFQNIRESRFRTLDPDQAHLFFIPISCHKMRGKGTSYENMTIIVQNYVESLISKYPYWNRTLGADHFFVTCHDVGVRATEGLPLLVKNSIRAVCSPSYDVGFIPHKDVALPQVLQPFALPAGGNDVENRTSLGFWAGHRNSKIRVILARVNSARIADSIHYGCIPVILSNYYDLPFNDILDWRKFAVVLKESDVYQLKQILKNKSQDEFVALHNNLVKVIFSLLYFKKYFNASWLNFTLEFFIIYVFYKVITLQCIILYQIQKHFQWNSPPVRYDAFHMVMYDLWLRHHTIQY*