AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025980.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025980.01.T01 MTR_5g034580 68.690 626 137 5 14 625 6 586 0.0 845
MsG0580025980.01.T01 MTR_1g082870 63.467 646 173 6 4 624 2 609 0.0 805
MsG0580025980.01.T01 MTR_5g040690 62.346 648 178 6 4 625 2 609 0.0 776
MsG0580025980.01.T01 MTR_5g034140 71.982 439 108 2 197 625 13 446 0.0 620
MsG0580025980.01.T01 MTR_4g129890 53.448 638 226 8 19 625 20 617 0.0 619
MsG0580025980.01.T01 MTR_7g094810 46.130 633 277 5 19 625 9 603 0.0 567
MsG0580025980.01.T01 MTR_7g094810 45.840 637 277 6 19 625 9 607 0.0 563
MsG0580025980.01.T01 MTR_4g129310 52.847 562 241 5 53 607 66 610 0.0 548
MsG0580025980.01.T01 MTR_7g094810 45.596 579 256 4 19 571 9 554 2.13e-174 510
MsG0580025980.01.T01 MTR_7g094810 45.283 583 256 5 19 571 9 558 8.98e-173 506
MsG0580025980.01.T01 MTR_1g072280 42.970 633 297 6 19 625 13 607 1.65e-172 508
MsG0580025980.01.T01 MTR_7g094810 46.012 489 219 3 18 494 8 463 3.45e-150 444
MsG0580025980.01.T01 MTR_5g034660 61.561 346 59 4 297 628 2 287 5.11e-135 400
MsG0580025980.01.T01 MTR_8g010670 32.941 340 145 11 19 328 34 320 6.07e-35 139
MsG0580025980.01.T01 MTR_4g123543 53.097 113 45 2 520 631 33 138 2.76e-30 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025980.01.T01 AT5G27540 54.416 634 223 9 19 625 18 612 0.0 655
MsG0580025980.01.T01 AT5G27540 54.416 634 223 9 19 625 18 612 0.0 655
MsG0580025980.01.T01 AT3G63150 45.597 636 282 5 15 624 11 608 0.0 567
MsG0580025980.01.T01 AT3G05310 43.465 635 288 11 19 620 15 611 1.91e-171 506
MsG0580025980.01.T01 AT3G05310 47.134 471 222 8 172 620 1 466 1.76e-140 421
MsG0580025980.01.T01 AT3G05310 47.134 471 222 8 172 620 1 466 5.16e-140 420

Find 156 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGACTGTGCTCCGGAAATT+TGG 0.224993 5:+28548357 MsG0580025980.01.T01:CDS
TGGAGCAACAATAGATAAAT+TGG 0.277875 5:+28553951 MsG0580025980.01.T01:three_prime_UTR
GCTCAGCAGCAGTTACAATT+TGG 0.280509 5:-28553163 None:intergenic
TTTGATTCCTTATCAAATAA+AGG 0.288723 5:-28547927 None:intergenic
AATTGTTCCAATTGGAATAA+TGG 0.298990 5:+28553781 MsG0580025980.01.T01:CDS
CATCAATATATCCAAATTTC+CGG 0.299304 5:-28548368 None:intergenic
TGCCAATCAGTGTGAAGTTT+GGG 0.305189 5:+28553120 MsG0580025980.01.T01:CDS
TCATGAACAGGTTAAAGTTC+CGG 0.337768 5:+28547502 MsG0580025980.01.T01:intron
TTCAAAATATAAGCACGTTT+TGG 0.341299 5:+28547342 MsG0580025980.01.T01:CDS
ATAAAGGAGCTACAGGATAA+AGG 0.344533 5:-28547911 None:intergenic
GCATAAAATATGCAAGGTTC+GGG 0.345957 5:-28553895 None:intergenic
TGTAGCTCCTTTATTTGATA+AGG 0.348468 5:+28547920 MsG0580025980.01.T01:CDS
TAGATAAATTGGCATGTAAT+AGG 0.350020 5:+28553962 MsG0580025980.01.T01:three_prime_UTR
GTTAAGCTCGACCTGTGTTT+TGG 0.351245 5:+28547086 MsG0580025980.01.T01:CDS
GGCTATACAAGAGGCAACTA+TGG 0.353980 5:+28551728 MsG0580025980.01.T01:CDS
TCCTCTTCTTCGCAAATTAG+AGG 0.356397 5:+28547367 MsG0580025980.01.T01:CDS
CTTGCAGTCGTTGTTCCAAT+TGG 0.359978 5:+28553742 MsG0580025980.01.T01:CDS
TACATACCTACAAACATATA+AGG 0.362405 5:-28553365 None:intergenic
CAGGATAACCAATGTATATC+AGG 0.362498 5:-28549398 None:intergenic
GTGCCAATCAGTGAAAAGTT+AGG 0.363043 5:+28553257 MsG0580025980.01.T01:CDS
CTTTCTACGGCATCCTTGTA+TGG 0.368168 5:-28549055 None:intergenic
TGCATAAAATATGCAAGGTT+CGG 0.368322 5:-28553896 None:intergenic
ATGCCAATCAGTGTGAAGTT+TGG 0.369002 5:+28553119 MsG0580025980.01.T01:CDS
GCCGTAGAAAGGAATGAATT+TGG 0.369065 5:+28549067 MsG0580025980.01.T01:CDS
TTGCTGAAAATTGTTCCAAT+TGG 0.369986 5:+28553773 MsG0580025980.01.T01:CDS
TACTCCCATGTACTGCTTGT+GGG 0.376333 5:-28553225 None:intergenic
TAAAGGAGCTACAGGATAAA+GGG 0.386738 5:-28547910 None:intergenic
TCACAGAACTTCTGCATTAG+TGG 0.391405 5:-28547596 None:intergenic
TCAGCAACCGTTATTCCAAT+TGG 0.391581 5:-28553757 None:intergenic
TCAGCAACCATTATTCCAAT+TGG 0.397265 5:-28553788 None:intergenic
ATTCAACTGTAATATTTCTC+TGG 0.400134 5:-28553988 None:intergenic
TCCAAATTCATTCCTTTCTA+CGG 0.418737 5:-28549068 None:intergenic
TACAGCATAATGATCCTCAT+TGG 0.422076 5:-28549680 None:intergenic
TGGACAAGACACTGGCTATC+AGG 0.422154 5:+28551656 MsG0580025980.01.T01:CDS
TCCCCAAACTTCACACTGAT+TGG 0.424086 5:-28553122 None:intergenic
AATATTACAGTTGAATGAAA+AGG 0.425929 5:+28553995 MsG0580025980.01.T01:three_prime_UTR
ATTTCCTTGTTGAAGGTCAC+TGG 0.432691 5:+28547861 MsG0580025980.01.T01:intron
CGTTGTTCCAATTGGAATAA+CGG 0.433432 5:+28553750 MsG0580025980.01.T01:CDS
TTAGGTCTGACGAGTCTTCA+TGG 0.434539 5:+28551595 MsG0580025980.01.T01:intron
TCAGACCAAAGACTCTTTGT+TGG 0.434545 5:-28549950 None:intergenic
TACCCACCTTATATGTTTGT+AGG 0.437680 5:+28553359 MsG0580025980.01.T01:CDS
CAATCATAGACACCTCTTCC+CGG 0.438322 5:+28547123 MsG0580025980.01.T01:CDS
ACCAGCCTTGTTCTCGCTGC+GGG 0.439408 5:+28547047 MsG0580025980.01.T01:CDS
CTGATATACATTGGTTATCC+TGG 0.441075 5:+28549399 MsG0580025980.01.T01:CDS
TGCCAATCAGTGAAAAGTTA+GGG 0.441813 5:+28553258 MsG0580025980.01.T01:CDS
CTCAAAAGAAACACCTGATC+AGG 0.442794 5:-28548435 None:intergenic
GCGTTATTGAATTCTTTCAT+TGG 0.442956 5:+28549540 MsG0580025980.01.T01:CDS
GTCTAAGTACGTCAACGGAC+GGG 0.443100 5:+28546974 MsG0580025980.01.T01:CDS
ATCTGCTATTCGTGTGACTA+GGG 0.444432 5:+28549431 MsG0580025980.01.T01:CDS
TTACAGCCAACCACTATAAC+CGG 0.447535 5:-28547521 None:intergenic
GCATTGAGTGTTCAGCATAT+AGG 0.451872 5:+28547729 MsG0580025980.01.T01:CDS
CATCTGCTATTCGTGTGACT+AGG 0.459662 5:+28549430 MsG0580025980.01.T01:CDS
AGTTTCTGAAGAACTACAAC+GGG 0.461520 5:+28547274 MsG0580025980.01.T01:CDS
AATCAATATTTGTGCGTGGA+TGG 0.465658 5:-28546911 None:intergenic
AGCATTCTAAACAATGAAGC+TGG 0.472033 5:+28553197 MsG0580025980.01.T01:CDS
TATTGAATTCTTTCATTGGA+AGG 0.472632 5:+28549544 MsG0580025980.01.T01:CDS
TATTATAGTCTCAGTTGGTA+TGG 0.474941 5:-28553923 None:intergenic
TTATCAAATAAAGGAGCTAC+AGG 0.475843 5:-28547918 None:intergenic
GGTTAAAGTTCCGGTTATAG+TGG 0.476848 5:+28547511 MsG0580025980.01.T01:intron
TGCCCTTAGCCATTGTGAAC+TGG 0.478101 5:+28548019 MsG0580025980.01.T01:CDS
TGCGGGCGCCTTTAAAATCC+AGG 0.478771 5:+28547064 MsG0580025980.01.T01:CDS
ATCAATATTTGTGCGTGGAT+GGG 0.480646 5:-28546910 None:intergenic
GCCCGCAGCGAGAACAAGGC+TGG 0.481223 5:-28547048 None:intergenic
GCTCAGCAGCAGTTACAATT+CGG 0.484471 5:-28553301 None:intergenic
AAAGTTCCGGTTATAGTGGT+TGG 0.485182 5:+28547515 MsG0580025980.01.T01:CDS
CATACAAGGATGCCGTAGAA+AGG 0.492111 5:+28549056 MsG0580025980.01.T01:CDS
GGTTCTCCACACTAAAGGTC+GGG 0.492407 5:-28549377 None:intergenic
AGAAAACATGGACTGTGCTC+CGG 0.493735 5:+28548349 MsG0580025980.01.T01:CDS
CTACTCCCATGTACTGCTTG+TGG 0.494448 5:-28553226 None:intergenic
GCATGAAGAAGTAGAAATCC+TGG 0.501522 5:-28548300 None:intergenic
GCATAATGATCCTCATTGGT+TGG 0.504151 5:-28549676 None:intergenic
GAACGAGGACTTACATTGCC+AGG 0.504896 5:+28548282 MsG0580025980.01.T01:CDS
TTGTTTAGAATGCTTAAATG+AGG 0.507407 5:-28553188 None:intergenic
GTGAAAGAAAATTTGTCTGA+AGG 0.507439 5:+28548252 MsG0580025980.01.T01:CDS
TATCAGGTTCTCCACACTAA+AGG 0.509896 5:-28549382 None:intergenic
TGCATTAGTGGTGACATCAT+CGG 0.509983 5:-28547584 None:intergenic
ATATTACAGTTGAATGAAAA+GGG 0.514770 5:+28553996 MsG0580025980.01.T01:three_prime_UTR
ACCTCTAATTTGCGAAGAAG+AGG 0.515802 5:-28547368 None:intergenic
AGGCGCCCGCAGCGAGAACA+AGG 0.518674 5:-28547052 None:intergenic
AACACAGGTCGAGCTTAACC+TGG 0.519085 5:-28547082 None:intergenic
GGACATGGGACGCAAGGACA+TGG 0.522331 5:+28553082 MsG0580025980.01.T01:CDS
GTCACACGAATAGCAGATGA+TGG 0.529764 5:-28549426 None:intergenic
TCTAAGTACGTCAACGGACG+GGG 0.531264 5:+28546975 MsG0580025980.01.T01:CDS
GTCATTATTATAGTCTCAGT+TGG 0.531577 5:-28553928 None:intergenic
AACTTCACACTGATTGGCAT+GGG 0.541395 5:-28553116 None:intergenic
CATCCAGTTCACAATGGCTA+AGG 0.544585 5:-28548022 None:intergenic
AAGGTTCGGGGTTCGAACCC+CGG 0.544816 5:-28553882 None:intergenic
TCATCACTAATGCAGAAGTT+CGG 0.551329 5:+28547626 MsG0580025980.01.T01:CDS
CTTTGTGACCATGACAAAGA+TGG 0.552205 5:+28547996 MsG0580025980.01.T01:CDS
TGAAAGAAAATTTGTCTGAA+GGG 0.554018 5:+28548253 MsG0580025980.01.T01:CDS
GAACGAGTGTTACCGGGAAG+AGG 0.554644 5:-28547135 None:intergenic
GTGCTGAGAGAGATTTCTGA+TGG 0.556923 5:+28549907 MsG0580025980.01.T01:CDS
GGATTATGAGCTTCAGAATG+TGG 0.558387 5:-28549655 None:intergenic
CTTAGCCATTGTGAACTGGA+TGG 0.558420 5:+28548023 MsG0580025980.01.T01:CDS
ACTGAGACTATAATAATGAC+TGG 0.558420 5:+28553931 MsG0580025980.01.T01:three_prime_UTR
AACAGTTCTTCTAGTTCGTG+AGG 0.560848 5:-28548794 None:intergenic
GTAGTTCGCATTGTTGTCGC+AGG 0.563331 5:+28547005 MsG0580025980.01.T01:CDS
TGTTTAGAATGCTTAAATGA+GGG 0.564576 5:-28553187 None:intergenic
GCTGAAAGGAAGAATGTGTC+TGG 0.565703 5:+28553806 MsG0580025980.01.T01:exon
TTATTCTTGTTGCAGCGTTG+AGG 0.567142 5:+28547241 MsG0580025980.01.T01:intron
GAGGTGTCTATGATTGTGAT+TGG 0.568797 5:-28547116 None:intergenic
TGATCATGATTCATTTACAA+TGG 0.569708 5:+28551707 MsG0580025980.01.T01:CDS
GACAATGCATAAAATATGCA+AGG 0.573559 5:-28553901 None:intergenic
AAACTTCACACTGATTGGCA+TGG 0.576582 5:-28553117 None:intergenic
AAGGGACTCCTGAGAAAACA+TGG 0.577614 5:+28548337 MsG0580025980.01.T01:CDS
TCTAACGCCTCGATGTAAGC+GGG 0.579128 5:+28547953 MsG0580025980.01.T01:CDS
TATAAGGTGGGTACTGCTTG+CGG 0.582224 5:-28553349 None:intergenic
TTGGAATAATGGTTGCTGAA+AGG 0.585578 5:+28553792 MsG0580025980.01.T01:exon
TGGTGGAGTCTCAAAGTTGT+TGG 0.585802 5:+28549927 MsG0580025980.01.T01:CDS
ATTTACAATGGCTATACAAG+AGG 0.586750 5:+28551719 MsG0580025980.01.T01:CDS
ATAGCAGATGATGGATCACC+AGG 0.590177 5:-28549417 None:intergenic
TTTGTAGGTAAGCAAGGACA+TGG 0.590560 5:+28553067 MsG0580025980.01.T01:intron
TAAACGTTGTTGATATGTCG+AGG 0.592363 5:+28549701 MsG0580025980.01.T01:CDS
TTGTTGTCGCAGGAGACTCT+CGG 0.592670 5:+28547015 MsG0580025980.01.T01:CDS
AAGCAAGGACATGGGACGCA+AGG 0.594329 5:+28553076 MsG0580025980.01.T01:CDS
GTCTGACGAGTCTTCATGGA+AGG 0.596947 5:+28551599 MsG0580025980.01.T01:CDS
AACCAGCCTTGTTCTCGCTG+CGG 0.600237 5:+28547046 MsG0580025980.01.T01:CDS
TAAGGGCACCATCTTTGTCA+TGG 0.601290 5:-28548004 None:intergenic
ATCCAGTTCACAATGGCTAA+GGG 0.601824 5:-28548021 None:intergenic
GTCGCAGGAGACTCTCGGAC+CGG 0.602667 5:+28547020 MsG0580025980.01.T01:CDS
TCTAAACCCGACCTTTAGTG+TGG 0.602693 5:+28549371 MsG0580025980.01.T01:CDS
GCTGGTCATGGACAAGACAC+TGG 0.603635 5:+28551648 MsG0580025980.01.T01:CDS
GTAGAAAGGAATGAATTTGG+AGG 0.604778 5:+28549070 MsG0580025980.01.T01:CDS
GATGTAAGCGGGCTTTGAAG+CGG 0.606595 5:+28547964 MsG0580025980.01.T01:CDS
TACCTACAAACATATAAGGT+GGG 0.606835 5:-28553361 None:intergenic
AGGTTCTCCACACTAAAGGT+CGG 0.609106 5:-28549378 None:intergenic
AAATTATGAGGTTGTAACAA+AGG 0.610474 5:-28554019 None:intergenic
GCCAATCAGTGTGAAGTTTG+GGG 0.611061 5:+28553121 MsG0580025980.01.T01:CDS
GACATGGGACGCAAGGACAT+GGG 0.611767 5:+28553083 MsG0580025980.01.T01:CDS
CGTCAACGGACGGGGTGGTG+CGG 0.613826 5:+28546983 MsG0580025980.01.T01:CDS
CTCTAACGCCTCGATGTAAG+CGG 0.614250 5:+28547952 MsG0580025980.01.T01:CDS
ATACCTACAAACATATAAGG+TGG 0.617733 5:-28553362 None:intergenic
TCTGCTATTCGTGTGACTAG+GGG 0.618530 5:+28549432 MsG0580025980.01.T01:CDS
CTGCTATTCGTGTGACTAGG+GGG 0.619985 5:+28549433 MsG0580025980.01.T01:CDS
TTGGATTGAAAATCCATACA+AGG 0.620453 5:+28549042 MsG0580025980.01.T01:CDS
GTGGAGAACCTGATATACAT+TGG 0.626230 5:+28549390 MsG0580025980.01.T01:CDS
AATCAATCAATATTTGTGCG+TGG 0.627236 5:-28546915 None:intergenic
ATAAATTGGCATGTAATAGG+TGG 0.634173 5:+28553965 MsG0580025980.01.T01:three_prime_UTR
GAAAGAAAATTTGTCTGAAG+GGG 0.634360 5:+28548254 MsG0580025980.01.T01:CDS
CTGAGAGAGATTTCTGATGG+TGG 0.635656 5:+28549910 MsG0580025980.01.T01:CDS
TGTCTAAGTACGTCAACGGA+CGG 0.643910 5:+28546973 MsG0580025980.01.T01:CDS
AGCTCATAATCCAACCAATG+AGG 0.653534 5:+28549666 MsG0580025980.01.T01:CDS
AAAACCCACAAGCAGTACAT+GGG 0.658773 5:+28553221 MsG0580025980.01.T01:CDS
AAACGTTGTTGATATGTCGA+GGG 0.659510 5:+28549702 MsG0580025980.01.T01:CDS
TTGTAGGTAAGCAAGGACAT+GGG 0.668055 5:+28553068 MsG0580025980.01.T01:intron
GCCAATCAGTGAAAAGTTAG+GGG 0.672658 5:+28553259 MsG0580025980.01.T01:CDS
GAGTTTCTGAAGAACTACAA+CGG 0.674718 5:+28547273 MsG0580025980.01.T01:CDS
AAGTACGTCAACGGACGGGG+TGG 0.675801 5:+28546978 MsG0580025980.01.T01:CDS
TTGGCACACCACCAAAACAC+AGG 0.678289 5:-28547097 None:intergenic
GATTTGTCTAAGTACGTCAA+CGG 0.680932 5:+28546969 MsG0580025980.01.T01:CDS
TTCAAAGCCCGCTTACATCG+AGG 0.682913 5:-28547960 None:intergenic
CATAAAATATGCAAGGTTCG+GGG 0.684091 5:-28553894 None:intergenic
TCTGAAGGGGTGAATGAACG+AGG 0.687354 5:+28548267 MsG0580025980.01.T01:CDS
TTAGCTTCAACTATAAGACA+AGG 0.695999 5:-28551681 None:intergenic
GAAAACCATCCAGTTCACAA+TGG 0.725670 5:-28548028 None:intergenic
TTCAGCATATAGGAATACCG+AGG 0.740395 5:+28547739 MsG0580025980.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAATTTATTATGATTATTT+GGG + Chr5:28550983-28551002 MsG0580025980.01.T01:intron 10.0%
!! TCTAATTTATTATGATTATT+TGG + Chr5:28550982-28551001 MsG0580025980.01.T01:intron 10.0%
!! TCTTATAATAACATAAAAAA+AGG - Chr5:28550060-28550079 None:intergenic 10.0%
!!! TCTAACTAAATTTTAATTTT+AGG + Chr5:28551577-28551596 MsG0580025980.01.T01:intron 10.0%
!!! TTTTGATTATTTTTTTTTTG+TGG - Chr5:28550194-28550213 None:intergenic 10.0%
!! AAAATGTACAAAAATGATTT+GGG - Chr5:28548700-28548719 None:intergenic 15.0%
!! AAATAATCATTGTTAATGTA+TGG - Chr5:28551045-28551064 None:intergenic 15.0%
!! AACTATAATTTCATATTATG+AGG + Chr5:28551507-28551526 MsG0580025980.01.T01:intron 15.0%
!! AAGCAATAATATAAAAACTT+AGG - Chr5:28550829-28550848 None:intergenic 15.0%
!! AGCAATAATATAAAAACTTA+GGG - Chr5:28550828-28550847 None:intergenic 15.0%
!! ATACATTAACAATGATTATT+TGG + Chr5:28551044-28551063 MsG0580025980.01.T01:intron 15.0%
!! ATATTGTTGTATATAATTGT+TGG + Chr5:28551805-28551824 MsG0580025980.01.T01:intron 15.0%
!! ATTATGAACTTTAATATAAG+TGG - Chr5:28550009-28550028 None:intergenic 15.0%
!! ATTATGTTCTAATTTACTAT+GGG + Chr5:28551474-28551493 MsG0580025980.01.T01:intron 15.0%
!! TACATTAACAATGATTATTT+GGG + Chr5:28551045-28551064 MsG0580025980.01.T01:intron 15.0%
!! TTATGTTATTATAAGATTAG+TGG + Chr5:28550064-28550083 MsG0580025980.01.T01:intron 15.0%
!! TTTATAATAAAAAAGTCTAG+CGG + Chr5:28550413-28550432 MsG0580025980.01.T01:intron 15.0%
!!! AAAAACTGTATTTGATTTTT+AGG + Chr5:28550210-28550229 MsG0580025980.01.T01:intron 15.0%
!!! ATAAACTTTTAAGATTTCAA+AGG - Chr5:28551249-28551268 None:intergenic 15.0%
!!! CAATAAATTTTTACCATTAA+TGG - Chr5:28552069-28552088 None:intergenic 15.0%
!!! CATATATTTTGTTCTATATA+TGG + Chr5:28548478-28548497 MsG0580025980.01.T01:intron 15.0%
!!! TAATAGATTCTTTTGTATAA+TGG + Chr5:28550588-28550607 MsG0580025980.01.T01:intron 15.0%
!!! TATAATCAAGATTTTTAATC+AGG - Chr5:28551291-28551310 None:intergenic 15.0%
!!! TATTAACCTGTTAAAATTTT+GGG + Chr5:28553476-28553495 MsG0580025980.01.T01:intron 15.0%
!!! TTATGTTTGTTCTTATTTTT+TGG + Chr5:28552351-28552370 MsG0580025980.01.T01:intron 15.0%
!!! TTTTAAAAGACTTTATTCAA+AGG - Chr5:28551320-28551339 None:intergenic 15.0%
!! AAATGTACAAAAATGATTTG+GGG - Chr5:28548699-28548718 None:intergenic 20.0%
!! AATAATATAAAAACTTAGGG+GGG - Chr5:28550825-28550844 None:intergenic 20.0%
!! AATATTACAGTTGAATGAAA+AGG + Chr5:28553995-28554014 MsG0580025980.01.T01:three_prime_UTR 20.0%
!! AATTACACAAGTATATTGTA+TGG - Chr5:28547839-28547858 None:intergenic 20.0%
!! ACAATTATCAGATTGTAATA+TGG - Chr5:28551152-28551171 None:intergenic 20.0%
!! ATAATGACTTCTAAATCTTA+GGG - Chr5:28551437-28551456 None:intergenic 20.0%
!! ATACCTCATTTACAAAAATA+AGG + Chr5:28552236-28552255 MsG0580025980.01.T01:intron 20.0%
!! ATATTACAGTTGAATGAAAA+GGG + Chr5:28553996-28554015 MsG0580025980.01.T01:three_prime_UTR 20.0%
!! CAATAATATAAAAACTTAGG+GGG - Chr5:28550826-28550845 None:intergenic 20.0%
!! CACTAATAGAAATAATGTAT+CGG - Chr5:28552138-28552157 None:intergenic 20.0%
!! CATTATGTTCTAATTTACTA+TGG + Chr5:28551473-28551492 MsG0580025980.01.T01:intron 20.0%
!! GAAAATGTACAAAAATGATT+TGG - Chr5:28548701-28548720 None:intergenic 20.0%
!! GCAATAATATAAAAACTTAG+GGG - Chr5:28550827-28550846 None:intergenic 20.0%
!! TAAAATACTTTCCAAATTGA+GGG - Chr5:28549220-28549239 None:intergenic 20.0%
!! TAAAATGATAAACCATGAAT+TGG - Chr5:28549862-28549881 None:intergenic 20.0%
!! TAAAATGTAAACAAATCTTG+TGG + Chr5:28550451-28550470 MsG0580025980.01.T01:intron 20.0%
!! TAATTAAATTTCCTTGTTGA+AGG + Chr5:28547854-28547873 MsG0580025980.01.T01:intron 20.0%
!! TATTATTTCATTCATTTGCA+TGG + Chr5:28551758-28551777 MsG0580025980.01.T01:intron 20.0%
!! TTAAAATACTTTCCAAATTG+AGG - Chr5:28549221-28549240 None:intergenic 20.0%
!! TTATCTTATTCTATTCTCAT+TGG + Chr5:28548539-28548558 MsG0580025980.01.T01:intron 20.0%
!! TTTGATTCCTTATCAAATAA+AGG - Chr5:28547930-28547949 None:intergenic 20.0%
!!! AAAAGTGCTATATTATATCT+GGG + Chr5:28547806-28547825 MsG0580025980.01.T01:intron 20.0%
!!! AAATGTACATACATTTTGTA+AGG + Chr5:28548875-28548894 MsG0580025980.01.T01:intron 20.0%
!!! ACATTGTTCTAGAAAATATA+AGG - Chr5:28549161-28549180 None:intergenic 20.0%
!!! ACTGTTATATTTTCCTTTTA+TGG + Chr5:28552901-28552920 MsG0580025980.01.T01:intron 20.0%
!!! CACAAATATTGATTGATTTT+AGG + Chr5:28546920-28546939 MsG0580025980.01.T01:five_prime_UTR 20.0%
!!! CTATTAACCTGTTAAAATTT+TGG + Chr5:28553475-28553494 MsG0580025980.01.T01:intron 20.0%
!!! CTGTTATATTTTCCTTTTAT+GGG + Chr5:28552902-28552921 MsG0580025980.01.T01:intron 20.0%
!!! GTAAAACTAACATAGATTTT+AGG + Chr5:28552795-28552814 MsG0580025980.01.T01:intron 20.0%
!!! TAAAAGTGCTATATTATATC+TGG + Chr5:28547805-28547824 MsG0580025980.01.T01:intron 20.0%
!!! TATGAGATTTTAAGATTGAA+AGG - Chr5:28551222-28551241 None:intergenic 20.0%
!!! TATTTTACCATACATTAACA+AGG + Chr5:28551035-28551054 MsG0580025980.01.T01:intron 20.0%
!!! TGAGTTTTTTGTTATAAAGA+AGG + Chr5:28548227-28548246 MsG0580025980.01.T01:CDS 20.0%
!!! TGATTTTGTTGATAATTCAT+GGG - Chr5:28553619-28553638 None:intergenic 20.0%
!!! TTATGTTCTTTTTTGACTTT+TGG + Chr5:28553409-28553428 MsG0580025980.01.T01:intron 20.0%
!!! TTGATTTTGTTGATAATTCA+TGG - Chr5:28553620-28553639 None:intergenic 20.0%
!!! TTTAGTCTATAAGTTGTTTT+AGG - Chr5:28550307-28550326 None:intergenic 20.0%
!!! TTTATTTCTTCTTCAGTATA+TGG + Chr5:28553562-28553581 MsG0580025980.01.T01:intron 20.0%
!!! TTTTGTATATTGTGATGTTT+TGG + Chr5:28551935-28551954 MsG0580025980.01.T01:intron 20.0%
!!! TTTTTAGTTAAAAATGCACA+TGG + Chr5:28550623-28550642 MsG0580025980.01.T01:intron 20.0%
!!! TTTTTGTTATGCTTAAATGA+AGG - Chr5:28553328-28553347 None:intergenic 20.0%
! AAAAAACACAATTGTGCATT+TGG + Chr5:28550273-28550292 MsG0580025980.01.T01:intron 25.0%
! AAATCTCAATTGAATACCAA+CGG - Chr5:28550521-28550540 None:intergenic 25.0%
! AACAACTTAAGTAATGAATC+TGG - Chr5:28547165-28547184 None:intergenic 25.0%
! AACATAGGATCTTCTATATT+TGG + Chr5:28553673-28553692 MsG0580025980.01.T01:intron 25.0%
! AATACATGAAATGAAGACTT+TGG - Chr5:28549810-28549829 None:intergenic 25.0%
! AATCTAACAAAACTTTCTAC+AGG + Chr5:28548173-28548192 MsG0580025980.01.T01:intron 25.0%
! AATCTTAGCTAATAACTTCA+AGG - Chr5:28552202-28552221 None:intergenic 25.0%
! AATTGTTCCAATTGGAATAA+TGG + Chr5:28553781-28553800 MsG0580025980.01.T01:CDS 25.0%
! ATAAAACAGATCAAATGCAA+AGG - Chr5:28552574-28552593 None:intergenic 25.0%
! ATAGAAAAGGTTGACAAATA+TGG - Chr5:28552847-28552866 None:intergenic 25.0%
! ATCACAATAAATCATTGTAC+AGG - Chr5:28552641-28552660 None:intergenic 25.0%
! ATCTTAGCTAATAACTTCAA+GGG - Chr5:28552201-28552220 None:intergenic 25.0%
! ATGACTTATGAATTGTCTAT+TGG + Chr5:28550544-28550563 MsG0580025980.01.T01:intron 25.0%
! ATTATTCATGTTCCAAAACA+TGG - Chr5:28547198-28547217 None:intergenic 25.0%
! ATTCAACTGTAATATTTCTC+TGG - Chr5:28553991-28554010 None:intergenic 25.0%
! CAAATAATGTACTACATCAA+TGG + Chr5:28553036-28553055 MsG0580025980.01.T01:intron 25.0%
! CATAATGACTTCTAAATCTT+AGG - Chr5:28551438-28551457 None:intergenic 25.0%
! CATCAATATATCCAAATTTC+CGG - Chr5:28548371-28548390 None:intergenic 25.0%
! CATTAATGAGTCAATAGAAA+AGG - Chr5:28552860-28552879 None:intergenic 25.0%
! CATTAATGTCATTCCATTAA+TGG + Chr5:28552053-28552072 MsG0580025980.01.T01:intron 25.0%
! CATTTATATCTTCCAATTCA+TGG + Chr5:28549847-28549866 MsG0580025980.01.T01:intron 25.0%
! CCATGAAGTATATATTATCA+TGG + Chr5:28552980-28552999 MsG0580025980.01.T01:intron 25.0%
! CCATGATAATATATACTTCA+TGG - Chr5:28552983-28553002 None:intergenic 25.0%
! CGGAAATTGTGTTAATTTAT+TGG - Chr5:28552118-28552137 None:intergenic 25.0%
! CTAATATTGAAATTCGTGAA+AGG - Chr5:28548974-28548993 None:intergenic 25.0%
! CTTTCACGAATTTCAATATT+AGG + Chr5:28548972-28548991 MsG0580025980.01.T01:intron 25.0%
! GAACAAAATATATGAGATTG+AGG - Chr5:28548472-28548491 None:intergenic 25.0%
! GGTATAAATAAAAGATACCT+CGG - Chr5:28547759-28547778 None:intergenic 25.0%
! GTATTGAATTGAGAATTCAA+GGG + Chr5:28550375-28550394 MsG0580025980.01.T01:intron 25.0%
! GTTGTATATAATTGTTGGAT+GGG + Chr5:28551810-28551829 MsG0580025980.01.T01:intron 25.0%
! TAAAACAGATCAAATGCAAA+GGG - Chr5:28552573-28552592 None:intergenic 25.0%
! TAAGTACCTGGAATAATATT+GGG + Chr5:28551540-28551559 MsG0580025980.01.T01:intron 25.0%
! TAATGACTTCTAAATCTTAG+GGG - Chr5:28551436-28551455 None:intergenic 25.0%
! TACATACCTACAAACATATA+AGG - Chr5:28553368-28553387 None:intergenic 25.0%
! TAGATAAATTGGCATGTAAT+AGG + Chr5:28553962-28553981 MsG0580025980.01.T01:three_prime_UTR 25.0%
! TATTGAATTCTTTCATTGGA+AGG + Chr5:28549544-28549563 MsG0580025980.01.T01:CDS 25.0%
! TCTAGAAAATATAAGGAAGA+GGG - Chr5:28549154-28549173 None:intergenic 25.0%
! TGAAAAAGTGGAATTATTCA+AGG - Chr5:28548669-28548688 None:intergenic 25.0%
! TGAAAGAAAATTTGTCTGAA+GGG + Chr5:28548253-28548272 MsG0580025980.01.T01:CDS 25.0%
! TGATCATGATTCATTTACAA+TGG + Chr5:28551707-28551726 MsG0580025980.01.T01:CDS 25.0%
! TGTACAATGATTTATTGTGA+TGG + Chr5:28552640-28552659 MsG0580025980.01.T01:intron 25.0%
! TGTATTGAATTGAGAATTCA+AGG + Chr5:28550374-28550393 MsG0580025980.01.T01:intron 25.0%
! TGTTGTATATAATTGTTGGA+TGG + Chr5:28551809-28551828 MsG0580025980.01.T01:intron 25.0%
! TTCAAACAACTGGAAAATAA+GGG + Chr5:28550349-28550368 MsG0580025980.01.T01:intron 25.0%
! TTGATCTGATTACATTTGAA+AGG + Chr5:28552478-28552497 MsG0580025980.01.T01:intron 25.0%
! TTTATAACAAAAAACTCACG+TGG - Chr5:28548225-28548244 None:intergenic 25.0%
!! AGTTTTCTTCTTAGCATTAA+AGG + Chr5:28547884-28547903 MsG0580025980.01.T01:CDS 25.0%
!! ATTATATATTTTCTGGACAG+TGG + Chr5:28549334-28549353 MsG0580025980.01.T01:intron 25.0%
!! ATTTGAAAGGTCTGTTTTAT+TGG + Chr5:28552491-28552510 MsG0580025980.01.T01:intron 25.0%
!! GAACAATTGTCTTACATTTT+CGG - Chr5:28552744-28552763 None:intergenic 25.0%
!! GATATTTGAAATTCATGAAC+AGG + Chr5:28547490-28547509 MsG0580025980.01.T01:intron 25.0%
!! TACATACATTTTGTAAGGAT+GGG + Chr5:28548880-28548899 MsG0580025980.01.T01:intron 25.0%
!! TGTTTAGAATGCTTAAATGA+GGG - Chr5:28553190-28553209 None:intergenic 25.0%
!! TTAGTTAAGTAACCATGTTT+TGG + Chr5:28547183-28547202 MsG0580025980.01.T01:intron 25.0%
!! TTATATATTTTCTGGACAGT+GGG + Chr5:28549335-28549354 MsG0580025980.01.T01:intron 25.0%
!! TTCAAAATATAAGCACGTTT+TGG + Chr5:28547342-28547361 MsG0580025980.01.T01:CDS 25.0%
!! TTCTAGAAAATATAAGGAAG+AGG - Chr5:28549155-28549174 None:intergenic 25.0%
!! TTGCATTTGATCTGTTTTAT+TGG + Chr5:28552574-28552593 MsG0580025980.01.T01:intron 25.0%
!! TTGTTTAGAATGCTTAAATG+AGG - Chr5:28553191-28553210 None:intergenic 25.0%
!!! AAAGCATCATCTTATTTTTG+TGG + Chr5:28549617-28549636 MsG0580025980.01.T01:intron 25.0%
!!! AATAGTTTTATCCCTCAATT+TGG + Chr5:28549206-28549225 MsG0580025980.01.T01:intron 25.0%
!!! ATGCCTTATTTTTGTAAATG+AGG - Chr5:28552242-28552261 None:intergenic 25.0%
!!! ATGTTTTGGAACATGAATAA+TGG + Chr5:28547197-28547216 MsG0580025980.01.T01:intron 25.0%
!!! ATTTTCTAGAACAATGTTTG+TGG + Chr5:28549164-28549183 MsG0580025980.01.T01:intron 25.0%
!!! CGATACATTATTTCTATTAG+TGG + Chr5:28552136-28552155 MsG0580025980.01.T01:intron 25.0%
!!! CTTATATTTTGAAGTGTCTT+AGG - Chr5:28547335-28547354 None:intergenic 25.0%
!!! GAGTCATTCCTTTTTTTTTT+TGG + Chr5:28553853-28553872 MsG0580025980.01.T01:three_prime_UTR 25.0%
!!! GGAAAGTATTTTAAGAATCA+AGG + Chr5:28549227-28549246 MsG0580025980.01.T01:intron 25.0%
!!! GGGATTTTAAAAGATTGTTT+TGG - Chr5:28551400-28551419 None:intergenic 25.0%
!!! GTTCATGTGCATTTTAATAT+AGG + Chr5:28552414-28552433 MsG0580025980.01.T01:intron 25.0%
!!! TATTACAGTGCTTCATTTTT+GGG + Chr5:28549496-28549515 MsG0580025980.01.T01:CDS 25.0%
!!! TATTTTTTTTTTGTGGTGTC+CGG - Chr5:28550187-28550206 None:intergenic 25.0%
!!! TCATTCCTTTTTTTTTTTGG+TGG + Chr5:28553856-28553875 MsG0580025980.01.T01:three_prime_UTR 25.0%
!!! TGGTTTATCATTTTATTTGC+AGG + Chr5:28549867-28549886 MsG0580025980.01.T01:intron 25.0%
!!! TGTGATTGTATTGATTTTGA+TGG - Chr5:28551344-28551363 None:intergenic 25.0%
!!! TTCTATTGACTCATTAATGA+AGG + Chr5:28552861-28552880 MsG0580025980.01.T01:intron 25.0%
AAGCAACTGTATTGTGAATA+AGG - Chr5:28550763-28550782 None:intergenic 30.0%
AAGCTATGTTTGTACTCTTT+CGG - Chr5:28550331-28550350 None:intergenic 30.0%
AATCAATCAATATTTGTGCG+TGG - Chr5:28546918-28546937 None:intergenic 30.0%
AATGACTTCTAAATCTTAGG+GGG - Chr5:28551435-28551454 None:intergenic 30.0%
AATGTTTGTGGAAAAGTGAT+GGG + Chr5:28549176-28549195 MsG0580025980.01.T01:intron 30.0%
ACATGTAAAGATATCATAGC+CGG - Chr5:28548948-28548967 None:intergenic 30.0%
ACTGAGACTATAATAATGAC+TGG + Chr5:28553931-28553950 MsG0580025980.01.T01:three_prime_UTR 30.0%
ATAAATTGGCATGTAATAGG+TGG + Chr5:28553965-28553984 MsG0580025980.01.T01:three_prime_UTR 30.0%
ATACAACCCAATATTATTCC+AGG - Chr5:28551549-28551568 None:intergenic 30.0%
ATACCTACAAACATATAAGG+TGG - Chr5:28553365-28553384 None:intergenic 30.0%
ATAGAAGATCCTATGTTGTT+GGG - Chr5:28553670-28553689 None:intergenic 30.0%
ATGCCTGTTTGTATTCAATT+TGG + Chr5:28548502-28548521 MsG0580025980.01.T01:intron 30.0%
ATTTACAATGGCTATACAAG+AGG + Chr5:28551719-28551738 MsG0580025980.01.T01:CDS 30.0%
CTAAGTACCTGGAATAATAT+TGG + Chr5:28551539-28551558 MsG0580025980.01.T01:intron 30.0%
CTTCAAACAACTGGAAAATA+AGG + Chr5:28550348-28550367 MsG0580025980.01.T01:intron 30.0%
CTTCTTCAGTATATGGTTAT+TGG + Chr5:28553569-28553588 MsG0580025980.01.T01:intron 30.0%
GAAAGAAAATTTGTCTGAAG+GGG + Chr5:28548254-28548273 MsG0580025980.01.T01:CDS 30.0%
GAACTCTTGTTAAAAATTGC+TGG + Chr5:28551630-28551649 MsG0580025980.01.T01:CDS 30.0%
GAATACAAGCTTAATCACAT+TGG + Chr5:28548112-28548131 MsG0580025980.01.T01:intron 30.0%
GACAATGCATAAAATATGCA+AGG - Chr5:28553904-28553923 None:intergenic 30.0%
GATGAAGCAATAATAAGAAG+AGG - Chr5:28550731-28550750 None:intergenic 30.0%
GCGTTATTGAATTCTTTCAT+TGG + Chr5:28549540-28549559 MsG0580025980.01.T01:CDS 30.0%
GTAATCAGATCAAATGCAAA+GGG - Chr5:28552471-28552490 None:intergenic 30.0%
GTCATTATTATAGTCTCAGT+TGG - Chr5:28553931-28553950 None:intergenic 30.0%
GTGAAAGAAAATTTGTCTGA+AGG + Chr5:28548252-28548271 MsG0580025980.01.T01:CDS 30.0%
TACCTACAAACATATAAGGT+GGG - Chr5:28553364-28553383 None:intergenic 30.0%
TAGAAAATCTATGCTTGACA+TGG + Chr5:28547468-28547487 MsG0580025980.01.T01:intron 30.0%
TATAGAAGATCCTATGTTGT+TGG - Chr5:28553671-28553690 None:intergenic 30.0%
TATTGTACGTCATCTTTCAA+TGG + Chr5:28551979-28551998 MsG0580025980.01.T01:intron 30.0%
TCAAACAACTGGAAAATAAG+GGG + Chr5:28550350-28550369 MsG0580025980.01.T01:intron 30.0%
TCACCAAATTGAATACAAAC+AGG - Chr5:28548508-28548527 None:intergenic 30.0%
TCCAAATTCATTCCTTTCTA+CGG - Chr5:28549071-28549090 None:intergenic 30.0%
TGCATAAAATATGCAAGGTT+CGG - Chr5:28553899-28553918 None:intergenic 30.0%
TGGAGCAACAATAGATAAAT+TGG + Chr5:28553951-28553970 MsG0580025980.01.T01:three_prime_UTR 30.0%
TGTAATCAGATCAAATGCAA+AGG - Chr5:28552472-28552491 None:intergenic 30.0%
TTACCATACATTAACAAGGA+AGG + Chr5:28551101-28551120 MsG0580025980.01.T01:intron 30.0%
TTAGCTTCAACTATAAGACA+AGG - Chr5:28551684-28551703 None:intergenic 30.0%
TTATCAAATAAAGGAGCTAC+AGG - Chr5:28547921-28547940 None:intergenic 30.0%
TTATTATCACGTCATATTGC+AGG + Chr5:28553715-28553734 MsG0580025980.01.T01:intron 30.0%
TTCATAATACCAGCATATGA+TGG + Chr5:28550021-28550040 MsG0580025980.01.T01:intron 30.0%
TTGCTGAAAATTGTTCCAAT+TGG + Chr5:28553773-28553792 MsG0580025980.01.T01:CDS 30.0%
TTGGATTGAAAATCCATACA+AGG + Chr5:28549042-28549061 MsG0580025980.01.T01:CDS 30.0%
TTGTTAAAAATTGCTGGTCA+TGG + Chr5:28551636-28551655 MsG0580025980.01.T01:CDS 30.0%
! AATATAGGTTCGTGCATTTT+TGG + Chr5:28552429-28552448 MsG0580025980.01.T01:intron 30.0%
! AATGTTTTCCCAAAGTAAAC+AGG + Chr5:28552819-28552838 MsG0580025980.01.T01:intron 30.0%
! ATGCTCTTTTCTTCGAAAAA+GGG + Chr5:28548319-28548338 MsG0580025980.01.T01:CDS 30.0%
! ATGTTTTCCCAAAGTAAACA+GGG + Chr5:28552820-28552839 MsG0580025980.01.T01:intron 30.0%
! GAAGTCATTATGTATTGACA+TGG + Chr5:28551446-28551465 MsG0580025980.01.T01:intron 30.0%
! GTACATACATTTTGTAAGGA+TGG + Chr5:28548879-28548898 MsG0580025980.01.T01:intron 30.0%
! GTATTACAGTGCTTCATTTT+TGG + Chr5:28549495-28549514 MsG0580025980.01.T01:CDS 30.0%
! TACAAGCAATCTACCTTTTT+GGG - Chr5:28548829-28548848 None:intergenic 30.0%
! TAGCAAAGGATGATGTATTT+TGG + Chr5:28552679-28552698 MsG0580025980.01.T01:intron 30.0%
! TATTATAGTCTCAGTTGGTA+TGG - Chr5:28553926-28553945 None:intergenic 30.0%
! TGTAGCTCCTTTATTTGATA+AGG + Chr5:28547920-28547939 MsG0580025980.01.T01:CDS 30.0%
! TGTATGGATTTTCAATCCAA+GGG - Chr5:28549042-28549061 None:intergenic 30.0%
! TTACAAGCAATCTACCTTTT+TGG - Chr5:28548830-28548849 None:intergenic 30.0%
! TTGTATGGATTTTCAATCCA+AGG - Chr5:28549043-28549062 None:intergenic 30.0%
! TTTAAAGCAACAAAATCCGT+TGG + Chr5:28550502-28550521 MsG0580025980.01.T01:intron 30.0%
! TTTTGTGGTATTCATAATGC+AGG + Chr5:28549632-28549651 MsG0580025980.01.T01:intron 30.0%
!! ACATCACCCAAAATTTTAAC+AGG - Chr5:28553485-28553504 None:intergenic 30.0%
!! TGTTAAAATTTTGGGTGATG+TGG + Chr5:28553484-28553503 MsG0580025980.01.T01:intron 30.0%
!!! ATTTTTTTTTTGTGGTGTCC+GGG - Chr5:28550186-28550205 None:intergenic 30.0%
!!! CATACTGATTTTCATCTAGA+AGG - Chr5:28547553-28547572 None:intergenic 30.0%
!!! GTATTTTAGTTGTTACCTTG+AGG + Chr5:28549566-28549585 MsG0580025980.01.T01:intron 30.0%
!!! GTCTATAAGTTGTTTTAGGA+AGG - Chr5:28550303-28550322 None:intergenic 30.0%
!!! TATTTTGAAGTGTCTTAGGA+CGG - Chr5:28547331-28547350 None:intergenic 30.0%
!!! TTCCTTTTTTTTTTTGGTGG+TGG + Chr5:28553859-28553878 MsG0580025980.01.T01:three_prime_UTR 30.0%
!!! TTCTCTGTTTTAACAAAGTC+CGG + Chr5:28548926-28548945 MsG0580025980.01.T01:intron 30.0%
!!! TTCTTTCTGAATGCTGTTTT+TGG - Chr5:28549473-28549492 None:intergenic 30.0%
AAACGTTGTTGATATGTCGA+GGG + Chr5:28549702-28549721 MsG0580025980.01.T01:CDS 35.0%
AAACTCAAAAACTATCTCCC+CGG + Chr5:28550102-28550121 MsG0580025980.01.T01:intron 35.0%
AAGCTTGTATTCAAGCTACA+AGG - Chr5:28548104-28548123 None:intergenic 35.0%
AAGGAGTCAGACATTATACT+TGG - Chr5:28548085-28548104 None:intergenic 35.0%
AATATAAAAACTTAGGGGGG+TGG - Chr5:28550822-28550841 None:intergenic 35.0%
AATTCTTAACATGTGCCCTA+AGG + Chr5:28552159-28552178 MsG0580025980.01.T01:intron 35.0%
AGCATTCTAAACAATGAAGC+TGG + Chr5:28553197-28553216 MsG0580025980.01.T01:CDS 35.0%
AGGAGTCAGACATTATACTT+GGG - Chr5:28548084-28548103 None:intergenic 35.0%
ATAAAGGAGCTACAGGATAA+AGG - Chr5:28547914-28547933 None:intergenic 35.0%
ATGAAATGAAGACTTTGGTG+CGG - Chr5:28549805-28549824 None:intergenic 35.0%
ATGACTTCTAAATCTTAGGG+GGG - Chr5:28551434-28551453 None:intergenic 35.0%
ATGATGCATGATTGTATGTC+TGG + Chr5:28549265-28549284 MsG0580025980.01.T01:intron 35.0%
ATTCTTAACATGTGCCCTAA+GGG + Chr5:28552160-28552179 MsG0580025980.01.T01:intron 35.0%
CAAACAACTGGAAAATAAGG+GGG + Chr5:28550351-28550370 MsG0580025980.01.T01:intron 35.0%
CAAACATAGCTTCAAACAAC+TGG + Chr5:28550339-28550358 MsG0580025980.01.T01:intron 35.0%
CAATCTCACAAAAAACCTTG+AGG + Chr5:28550659-28550678 MsG0580025980.01.T01:intron 35.0%
CAATGTTTGTGGAAAAGTGA+TGG + Chr5:28549175-28549194 MsG0580025980.01.T01:intron 35.0%
CAGGATAACCAATGTATATC+AGG - Chr5:28549401-28549420 None:intergenic 35.0%
CAGTATATGGTTATTGGAGT+TGG + Chr5:28553575-28553594 MsG0580025980.01.T01:intron 35.0%
CATAAAATATGCAAGGTTCG+GGG - Chr5:28553897-28553916 None:intergenic 35.0%
CGATAATTTCCATCATATGC+TGG - Chr5:28550033-28550052 None:intergenic 35.0%
CGTTGTTCCAATTGGAATAA+CGG + Chr5:28553750-28553769 MsG0580025980.01.T01:CDS 35.0%
GATTTGTCTAAGTACGTCAA+CGG + Chr5:28546969-28546988 MsG0580025980.01.T01:CDS 35.0%
GCATAAAATATGCAAGGTTC+GGG - Chr5:28553898-28553917 None:intergenic 35.0%
GTAGAAAGGAATGAATTTGG+AGG + Chr5:28549070-28549089 MsG0580025980.01.T01:CDS 35.0%
TAAAATGCACATGAACGTGA+AGG - Chr5:28552410-28552429 None:intergenic 35.0%
TAAACGTTGTTGATATGTCG+AGG + Chr5:28549701-28549720 MsG0580025980.01.T01:CDS 35.0%
TAAAGGAGCTACAGGATAAA+GGG - Chr5:28547913-28547932 None:intergenic 35.0%
TACAGCATAATGATCCTCAT+TGG - Chr5:28549683-28549702 None:intergenic 35.0%
TACCCACCTTATATGTTTGT+AGG + Chr5:28553359-28553378 MsG0580025980.01.T01:CDS 35.0%
TCACCTGTCATAAACGAAAA+CGG - Chr5:28549986-28550005 None:intergenic 35.0%
TCAGCAACCATTATTCCAAT+TGG - Chr5:28553791-28553810 None:intergenic 35.0%
TCATCACTAATGCAGAAGTT+CGG + Chr5:28547626-28547645 MsG0580025980.01.T01:CDS 35.0%
TCATGAACAGGTTAAAGTTC+CGG + Chr5:28547502-28547521 MsG0580025980.01.T01:intron 35.0%
TGCCAATCAGTGAAAAGTTA+GGG + Chr5:28553258-28553277 MsG0580025980.01.T01:CDS 35.0%
TGTTATCATCATGAACCTCA+AGG - Chr5:28549584-28549603 None:intergenic 35.0%
TTGCCTTCCTTGTTAATGTA+TGG - Chr5:28551107-28551126 None:intergenic 35.0%
TTGGAATAATGGTTGCTGAA+AGG + Chr5:28553792-28553811 MsG0580025980.01.T01:exon 35.0%
! ACTTGATGCATTTTTGTCAG+AGG + Chr5:28549099-28549118 MsG0580025980.01.T01:CDS 35.0%
! AGTTTCTGAAGAACTACAAC+GGG + Chr5:28547274-28547293 MsG0580025980.01.T01:CDS 35.0%
! ATGTGTTTTGTAGGTAAGCA+AGG + Chr5:28553061-28553080 MsG0580025980.01.T01:intron 35.0%
! CAGCAACATATTTTCTTGAC+TGG - Chr5:28550870-28550889 None:intergenic 35.0%
! CATGCTCTTTTCTTCGAAAA+AGG + Chr5:28548318-28548337 MsG0580025980.01.T01:CDS 35.0%
! CTGATATACATTGGTTATCC+TGG + Chr5:28549399-28549418 MsG0580025980.01.T01:CDS 35.0%
! GAGCTTAACCTGGATTTTAA+AGG - Chr5:28547075-28547094 None:intergenic 35.0%
! GAGTTTCTGAAGAACTACAA+CGG + Chr5:28547273-28547292 MsG0580025980.01.T01:CDS 35.0%
! GGTTCATGTGTTCTATCTTT+TGG + Chr5:28553515-28553534 MsG0580025980.01.T01:intron 35.0%
! TCAATGGCAATGTGTTTTGT+AGG + Chr5:28553052-28553071 MsG0580025980.01.T01:intron 35.0%
! TCAATGGCAGTTTGAAGTTA+GGG + Chr5:28551995-28552014 MsG0580025980.01.T01:intron 35.0%
! TGATTTATTGTGATGGAGAG+AGG + Chr5:28552647-28552666 MsG0580025980.01.T01:intron 35.0%
! TGTTTTCCCAAAGTAAACAG+GGG + Chr5:28552821-28552840 MsG0580025980.01.T01:intron 35.0%
! TGTTTTCTACTGTCCCAAAA+AGG + Chr5:28548813-28548832 MsG0580025980.01.T01:CDS 35.0%
! TTCAATGGCAGTTTGAAGTT+AGG + Chr5:28551994-28552013 MsG0580025980.01.T01:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+AGG - Chr5:28552178-28552197 None:intergenic 35.0%
!! AATGTTAACTTGTGCCCTTA+GGG - Chr5:28552177-28552196 None:intergenic 35.0%
!! AGCTTAATCACATTGGCTTA+TGG + Chr5:28548119-28548138 MsG0580025980.01.T01:intron 35.0%
!! TAACTTTTCACTGATTGGCA+CGG - Chr5:28553258-28553277 None:intergenic 35.0%
!! TAATCACATTGGCTTATGGT+AGG + Chr5:28548123-28548142 MsG0580025980.01.T01:intron 35.0%
!!! TTTTGTAAGGATGGGCTATA+TGG + Chr5:28548888-28548907 MsG0580025980.01.T01:intron 35.0%
!!! TTTTTTTTTTGTGGTGTCCG+GGG - Chr5:28550185-28550204 None:intergenic 35.0%
!!! TTTTTTTTTTTGGTGGTGGC+CGG + Chr5:28553863-28553882 MsG0580025980.01.T01:three_prime_UTR 35.0%
AAAAACCCACAAGCAGTACA+TGG + Chr5:28553220-28553239 MsG0580025980.01.T01:CDS 40.0%
AAAACCCACAAGCAGTACAT+GGG + Chr5:28553221-28553240 MsG0580025980.01.T01:CDS 40.0%
AAAGTTCCGGTTATAGTGGT+TGG + Chr5:28547515-28547534 MsG0580025980.01.T01:CDS 40.0%
AACTCAAAAACTATCTCCCC+GGG + Chr5:28550103-28550122 MsG0580025980.01.T01:intron 40.0%
AATATGGCCCCTGTTTACTT+TGG - Chr5:28552831-28552850 None:intergenic 40.0%
AATGCTTAACATGTGCCCTA+AGG - Chr5:28552037-28552056 None:intergenic 40.0%
AGAGGATAGAATGCTAGCAA+AGG + Chr5:28552665-28552684 MsG0580025980.01.T01:intron 40.0%
AGATGTCTCAAAAAGCCTCA+AGG - Chr5:28550677-28550696 None:intergenic 40.0%
AGCTCATAATCCAACCAATG+AGG + Chr5:28549666-28549685 MsG0580025980.01.T01:CDS 40.0%
ATATGGCCCCTGTTTACTTT+GGG - Chr5:28552830-28552849 None:intergenic 40.0%
ATCCAGTTCACAATGGCTAA+GGG - Chr5:28548024-28548043 None:intergenic 40.0%
ATCTGCTATTCGTGTGACTA+GGG + Chr5:28549431-28549450 MsG0580025980.01.T01:CDS 40.0%
ATGCCAATCAGTGTGAAGTT+TGG + Chr5:28553119-28553138 MsG0580025980.01.T01:CDS 40.0%
ATGCTTAACATGTGCCCTAA+GGG - Chr5:28552036-28552055 None:intergenic 40.0%
ATTTCCTTGTTGAAGGTCAC+TGG + Chr5:28547861-28547880 MsG0580025980.01.T01:intron 40.0%
CACTCAGCTATACCCATAAA+AGG - Chr5:28552917-28552936 None:intergenic 40.0%
CTCAAAAGAAACACCTGATC+AGG - Chr5:28548438-28548457 None:intergenic 40.0%
CTTTGTGACCATGACAAAGA+TGG + Chr5:28547996-28548015 MsG0580025980.01.T01:CDS 40.0%
GAAAACCATCCAGTTCACAA+TGG - Chr5:28548031-28548050 None:intergenic 40.0%
GACAATGCATAATGTGTGCA+AGG + Chr5:28550146-28550165 MsG0580025980.01.T01:intron 40.0%
GATGATGAGTTTGATTGCAG+TGG - Chr5:28547780-28547799 None:intergenic 40.0%
GCATAATGATCCTCATTGGT+TGG - Chr5:28549679-28549698 None:intergenic 40.0%
GCATGAAGAAGTAGAAATCC+TGG - Chr5:28548303-28548322 None:intergenic 40.0%
GCATTGAGTGTTCAGCATAT+AGG + Chr5:28547729-28547748 MsG0580025980.01.T01:CDS 40.0%
GCCAATCAGTGAAAAGTTAG+GGG + Chr5:28553259-28553278 MsG0580025980.01.T01:CDS 40.0%
GCCGTAGAAAGGAATGAATT+TGG + Chr5:28549067-28549086 MsG0580025980.01.T01:CDS 40.0%
GGATTATGAGCTTCAGAATG+TGG - Chr5:28549658-28549677 None:intergenic 40.0%
GGCAACTTATACTAAGTACC+TGG + Chr5:28551528-28551547 MsG0580025980.01.T01:intron 40.0%
GGCCACCACCAAAAAAAAAA+AGG - Chr5:28553864-28553883 None:intergenic 40.0%
GGTTAAAGTTCCGGTTATAG+TGG + Chr5:28547511-28547530 MsG0580025980.01.T01:intron 40.0%
GTGCCAATCAGTGAAAAGTT+AGG + Chr5:28553257-28553276 MsG0580025980.01.T01:CDS 40.0%
GTGGAGAACCTGATATACAT+TGG + Chr5:28549390-28549409 MsG0580025980.01.T01:CDS 40.0%
TATCAGGTTCTCCACACTAA+AGG - Chr5:28549385-28549404 None:intergenic 40.0%
TCACAGAACTTCTGCATTAG+TGG - Chr5:28547599-28547618 None:intergenic 40.0%
TCAGACCAAAGACTCTTTGT+TGG - Chr5:28549953-28549972 None:intergenic 40.0%
TCAGCAACCGTTATTCCAAT+TGG - Chr5:28553760-28553779 None:intergenic 40.0%
TCCTCTTCTTCGCAAATTAG+AGG + Chr5:28547367-28547386 MsG0580025980.01.T01:CDS 40.0%
TGCATTAGTGGTGACATCAT+CGG - Chr5:28547587-28547606 None:intergenic 40.0%
TGCCAATCAGTGTGAAGTTT+GGG + Chr5:28553120-28553139 MsG0580025980.01.T01:CDS 40.0%
TGGATAAGAACGAGTGTTAC+CGG - Chr5:28547145-28547164 None:intergenic 40.0%
TGGGGAGAAACATGAAAAAG+TGG - Chr5:28548681-28548700 None:intergenic 40.0%
TTACAGCCAACCACTATAAC+CGG - Chr5:28547524-28547543 None:intergenic 40.0%
TTATCACGTCATATTGCAGG+TGG + Chr5:28553718-28553737 MsG0580025980.01.T01:intron 40.0%
TTATTCTTGTTGCAGCGTTG+AGG + Chr5:28547241-28547260 MsG0580025980.01.T01:intron 40.0%
TTCAGCATATAGGAATACCG+AGG + Chr5:28547739-28547758 MsG0580025980.01.T01:CDS 40.0%
TTGTAGGTAAGCAAGGACAT+GGG + Chr5:28553068-28553087 MsG0580025980.01.T01:intron 40.0%
TTTGTAGGTAAGCAAGGACA+TGG + Chr5:28553067-28553086 MsG0580025980.01.T01:intron 40.0%
! AAACTTCACACTGATTGGCA+TGG - Chr5:28553120-28553139 None:intergenic 40.0%
! AACTTCACACTGATTGGCAT+GGG - Chr5:28553119-28553138 None:intergenic 40.0%
! ACCTCTAATTTGCGAAGAAG+AGG - Chr5:28547371-28547390 None:intergenic 40.0%
! GAGGTGTCTATGATTGTGAT+TGG - Chr5:28547119-28547138 None:intergenic 40.0%
! TGAAATGAAGACTTTGGTGC+GGG - Chr5:28549804-28549823 None:intergenic 40.0%
! TTAGGGGGGTGTATTAGATT+GGG - Chr5:28551420-28551439 None:intergenic 40.0%
! TTGTGAACTGGATGGTTTTC+AGG + Chr5:28548031-28548050 MsG0580025980.01.T01:CDS 40.0%
! TTTTATACGTGCACCTGATC+AGG + Chr5:28548422-28548441 MsG0580025980.01.T01:CDS 40.0%
!! AACAGTTCTTCTAGTTCGTG+AGG - Chr5:28548797-28548816 None:intergenic 40.0%
!! AACTTTTCACTGATTGGCAC+GGG - Chr5:28553257-28553276 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + Chr5:28552019-28552038 MsG0580025980.01.T01:intron 40.0%
!! CGATTTTTAATTGCAGCCCT+TGG + Chr5:28549023-28549042 MsG0580025980.01.T01:intron 40.0%
!! CTTCATTTTTGGGCCTATGA+AGG + Chr5:28549506-28549525 MsG0580025980.01.T01:CDS 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + Chr5:28552018-28552037 MsG0580025980.01.T01:intron 40.0%
!!! TTGCCGTTTTCGTTTATGAC+AGG + Chr5:28549980-28549999 MsG0580025980.01.T01:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG + Chr5:28553864-28553883 MsG0580025980.01.T01:three_prime_UTR 40.0%
AACTCCAGTGACCTTCAACA+AGG - Chr5:28547868-28547887 None:intergenic 45.0%
AAGGGACTCCTGAGAAAACA+TGG + Chr5:28548337-28548356 MsG0580025980.01.T01:CDS 45.0%
AGGTTCTCCACACTAAAGGT+CGG - Chr5:28549381-28549400 None:intergenic 45.0%
ATAAGAAGAGGCTATGAGCG+CGG - Chr5:28550719-28550738 None:intergenic 45.0%
CAATCATAGACACCTCTTCC+CGG + Chr5:28547123-28547142 MsG0580025980.01.T01:CDS 45.0%
CATACAAGGATGCCGTAGAA+AGG + Chr5:28549056-28549075 MsG0580025980.01.T01:CDS 45.0%
CATCCAGTTCACAATGGCTA+AGG - Chr5:28548025-28548044 None:intergenic 45.0%
CATCTGCTATTCGTGTGACT+AGG + Chr5:28549430-28549449 MsG0580025980.01.T01:CDS 45.0%
CCACGTTATCCCAACAACAT+AGG + Chr5:28553658-28553677 MsG0580025980.01.T01:intron 45.0%
CCTATGTTGTTGGGATAACG+TGG - Chr5:28553661-28553680 None:intergenic 45.0%
CCTGGTGGAAGGAAAACATA+TGG - Chr5:28548760-28548779 None:intergenic 45.0%
CTGAGAGAGATTTCTGATGG+TGG + Chr5:28549910-28549929 MsG0580025980.01.T01:CDS 45.0%
CTTAGCCATTGTGAACTGGA+TGG + Chr5:28548023-28548042 MsG0580025980.01.T01:CDS 45.0%
CTTGCAGTCGTTGTTCCAAT+TGG + Chr5:28553742-28553761 MsG0580025980.01.T01:CDS 45.0%
CTTTCTACGGCATCCTTGTA+TGG - Chr5:28549058-28549077 None:intergenic 45.0%
GCCAATCAGTGTGAAGTTTG+GGG + Chr5:28553121-28553140 MsG0580025980.01.T01:CDS 45.0%
GCTCAGCAGCAGTTACAATT+CGG - Chr5:28553166-28553185 None:intergenic 45.0%
GCTCAGCAGCAGTTACAATT+TGG - Chr5:28553166-28553185 None:intergenic 45.0%
GCTGAAAGGAAGAATGTGTC+TGG + Chr5:28553806-28553825 MsG0580025980.01.T01:exon 45.0%
GGATAAGAACGAGTGTTACC+GGG - Chr5:28547144-28547163 None:intergenic 45.0%
GGCTATACAAGAGGCAACTA+TGG + Chr5:28551728-28551747 MsG0580025980.01.T01:CDS 45.0%
GTCACACGAATAGCAGATGA+TGG - Chr5:28549429-28549448 None:intergenic 45.0%
GTGCTGAGAGAGATTTCTGA+TGG + Chr5:28549907-28549926 MsG0580025980.01.T01:CDS 45.0%
GTTGGCCAACAAAGAGTCTT+TGG + Chr5:28549945-28549964 MsG0580025980.01.T01:intron 45.0%
TACTCCCATGTACTGCTTGT+GGG - Chr5:28553228-28553247 None:intergenic 45.0%
TATCAACTGAGCTAAGCTCC+CGG - Chr5:28550124-28550143 None:intergenic 45.0%
TCCCCAAACTTCACACTGAT+TGG - Chr5:28553125-28553144 None:intergenic 45.0%
TCTAAACCCGACCTTTAGTG+TGG + Chr5:28549371-28549390 MsG0580025980.01.T01:CDS 45.0%
TCTGCTATTCGTGTGACTAG+GGG + Chr5:28549432-28549451 MsG0580025980.01.T01:CDS 45.0%
TGCATAATGTGTGCAAGGTC+CGG + Chr5:28550151-28550170 MsG0580025980.01.T01:intron 45.0%
TGGTGGAGTCTCAAAGTTGT+TGG + Chr5:28549927-28549946 MsG0580025980.01.T01:CDS 45.0%
TGTCTAAGTACGTCAACGGA+CGG + Chr5:28546973-28546992 MsG0580025980.01.T01:CDS 45.0%
TTAGGTCTGACGAGTCTTCA+TGG + Chr5:28551595-28551614 MsG0580025980.01.T01:intron 45.0%
! AGAAAACATGGACTGTGCTC+CGG + Chr5:28548349-28548368 MsG0580025980.01.T01:CDS 45.0%
! AGCACAGTCCATGTTTTCTC+AGG - Chr5:28548348-28548367 None:intergenic 45.0%
! CCATATGTTTTCCTTCCACC+AGG + Chr5:28548757-28548776 MsG0580025980.01.T01:intron 45.0%
! CTTAGGGGGGTGTATTAGAT+TGG - Chr5:28551421-28551440 None:intergenic 45.0%
! GCAGATTTTCCTGCCTTCAT+AGG - Chr5:28549522-28549541 None:intergenic 45.0%
! GCCCCTAACTTTTCACTGAT+TGG - Chr5:28553263-28553282 None:intergenic 45.0%
! GGAGCTTAGCTCAGTTGATA+GGG + Chr5:28550124-28550143 MsG0580025980.01.T01:intron 45.0%
! GTTAAGCTCGACCTGTGTTT+TGG + Chr5:28547086-28547105 MsG0580025980.01.T01:CDS 45.0%
! GTTTTCCTTCCACCAGGATA+AGG + Chr5:28548763-28548782 MsG0580025980.01.T01:intron 45.0%
! TATAAGGTGGGTACTGCTTG+CGG - Chr5:28553352-28553371 None:intergenic 45.0%
! TTGGGTGATGTGGTTTGTAG+TGG + Chr5:28553494-28553513 MsG0580025980.01.T01:intron 45.0%
!! ATAGCAGATGATGGATCACC+AGG - Chr5:28549420-28549439 None:intergenic 45.0%
!! ATTTTTGGGCCTATGAAGGC+AGG + Chr5:28549510-28549529 MsG0580025980.01.T01:CDS 45.0%
!! TAAGGGCACCATCTTTGTCA+TGG - Chr5:28548007-28548026 None:intergenic 45.0%
!!! GAGAACAAGGCTGGTTTTAC+CGG - Chr5:28547042-28547061 None:intergenic 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG + Chr5:28553865-28553884 MsG0580025980.01.T01:three_prime_UTR 45.0%
!! ATATATAATATAAAAATCAA+TGG - Chr5:28549323-28549342 None:intergenic 5.0%
!!! TTTTTATATTATATATTTTC+TGG + Chr5:28549327-28549346 MsG0580025980.01.T01:intron 5.0%
AACACAGGTCGAGCTTAACC+TGG - Chr5:28547085-28547104 None:intergenic 50.0%
ATCAACTGAGCTAAGCTCCC+GGG - Chr5:28550123-28550142 None:intergenic 50.0%
CATAATGTGTGCAAGGTCCG+GGG + Chr5:28550153-28550172 MsG0580025980.01.T01:intron 50.0%
CTACTCCCATGTACTGCTTG+TGG - Chr5:28553229-28553248 None:intergenic 50.0%
CTCTAACGCCTCGATGTAAG+CGG + Chr5:28547952-28547971 MsG0580025980.01.T01:CDS 50.0%
CTGCTATTCGTGTGACTAGG+GGG + Chr5:28549433-28549452 MsG0580025980.01.T01:CDS 50.0%
GAACGAGGACTTACATTGCC+AGG + Chr5:28548282-28548301 MsG0580025980.01.T01:CDS 50.0%
GCATAATGTGTGCAAGGTCC+GGG + Chr5:28550152-28550171 MsG0580025980.01.T01:intron 50.0%
GGGAGCTTAGCTCAGTTGAT+AGG + Chr5:28550123-28550142 MsG0580025980.01.T01:intron 50.0%
GGTTCTCCACACTAAAGGTC+GGG - Chr5:28549380-28549399 None:intergenic 50.0%
GTAGTTCGCATTGTTGTCGC+AGG + Chr5:28547005-28547024 MsG0580025980.01.T01:CDS 50.0%
GTCTAAGTACGTCAACGGAC+GGG + Chr5:28546974-28546993 MsG0580025980.01.T01:CDS 50.0%
GTCTGACGAGTCTTCATGGA+AGG + Chr5:28551599-28551618 MsG0580025980.01.T01:CDS 50.0%
TCTAACGCCTCGATGTAAGC+GGG + Chr5:28547953-28547972 MsG0580025980.01.T01:CDS 50.0%
TCTAAGTACGTCAACGGACG+GGG + Chr5:28546975-28546994 MsG0580025980.01.T01:CDS 50.0%
TCTGAAGGGGTGAATGAACG+AGG + Chr5:28548267-28548286 MsG0580025980.01.T01:CDS 50.0%
TGCCCTTAGCCATTGTGAAC+TGG + Chr5:28548019-28548038 MsG0580025980.01.T01:CDS 50.0%
TGGACTGTGCTCCGGAAATT+TGG + Chr5:28548357-28548376 MsG0580025980.01.T01:CDS 50.0%
TTCAAAGCCCGCTTACATCG+AGG - Chr5:28547963-28547982 None:intergenic 50.0%
TTGGCACACCACCAAAACAC+AGG - Chr5:28547100-28547119 None:intergenic 50.0%
TTGTTGTCGCAGGAGACTCT+CGG + Chr5:28547015-28547034 MsG0580025980.01.T01:CDS 50.0%
! TGGACAAGACACTGGCTATC+AGG + Chr5:28551656-28551675 MsG0580025980.01.T01:CDS 50.0%
!! AAGCTCGACCTGTGTTTTGG+TGG + Chr5:28547089-28547108 MsG0580025980.01.T01:CDS 50.0%
!! GATGTAAGCGGGCTTTGAAG+CGG + Chr5:28547964-28547983 MsG0580025980.01.T01:CDS 50.0%
AAGCAAGGACATGGGACGCA+AGG + Chr5:28553076-28553095 MsG0580025980.01.T01:CDS 55.0%
CAGCACCTTATCCTGGTGGA+AGG - Chr5:28548771-28548790 None:intergenic 55.0%
GAACGAGTGTTACCGGGAAG+AGG - Chr5:28547138-28547157 None:intergenic 55.0%
GACATGGGACGCAAGGACAT+GGG + Chr5:28553083-28553102 MsG0580025980.01.T01:CDS 55.0%
GAGGTTGCAGCACCTTATCC+TGG - Chr5:28548778-28548797 None:intergenic 55.0%
GCTGGTCATGGACAAGACAC+TGG + Chr5:28551648-28551667 MsG0580025980.01.T01:CDS 55.0%
GTTGCAGCACCTTATCCTGG+TGG - Chr5:28548775-28548794 None:intergenic 55.0%
TCAACTGAGCTAAGCTCCCG+GGG - Chr5:28550122-28550141 None:intergenic 55.0%
!! AACCAGCCTTGTTCTCGCTG+CGG + Chr5:28547046-28547065 MsG0580025980.01.T01:CDS 55.0%
!! TGCGGGCGCCTTTAAAATCC+AGG + Chr5:28547064-28547083 MsG0580025980.01.T01:CDS 55.0%
AAGGTTCGGGGTTCGAACCC+CGG - Chr5:28553885-28553904 None:intergenic 60.0%
AAGTACGTCAACGGACGGGG+TGG + Chr5:28546978-28546997 MsG0580025980.01.T01:CDS 60.0%
GGACATGGGACGCAAGGACA+TGG + Chr5:28553082-28553101 MsG0580025980.01.T01:CDS 60.0%
!! ACCAGCCTTGTTCTCGCTGC+GGG + Chr5:28547047-28547066 MsG0580025980.01.T01:CDS 60.0%
AAGGTCCGGGGTTCGAACCC+CGG + Chr5:28550165-28550184 MsG0580025980.01.T01:intron 65.0%
GTCGCAGGAGACTCTCGGAC+CGG + Chr5:28547020-28547039 MsG0580025980.01.T01:CDS 65.0%
AGGCGCCCGCAGCGAGAACA+AGG - Chr5:28547055-28547074 None:intergenic 70.0%
CGTCAACGGACGGGGTGGTG+CGG + Chr5:28546983-28547002 MsG0580025980.01.T01:CDS 70.0%
GCCCGCAGCGAGAACAAGGC+TGG - Chr5:28547051-28547070 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - Chr5:28550173-28550192 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 28546913 28554026 28546913 ID=MsG0580025980.01;Name=MsG0580025980.01
Chr5 mRNA 28546913 28554026 28546913 ID=MsG0580025980.01.T01;Parent=MsG0580025980.01;Name=MsG0580025980.01.T01;_AED=0.13;_eAED=0.13;_QI=41|0.69|0.71|1|1|1|14|216|696
Chr5 exon 28546913 28547144 28546913 ID=MsG0580025980.01.T01:exon:6949;Parent=MsG0580025980.01.T01
Chr5 exon 28547256 28547388 28547256 ID=MsG0580025980.01.T01:exon:6950;Parent=MsG0580025980.01.T01
Chr5 exon 28547512 28547760 28547512 ID=MsG0580025980.01.T01:exon:6951;Parent=MsG0580025980.01.T01
Chr5 exon 28547876 28548052 28547876 ID=MsG0580025980.01.T01:exon:6952;Parent=MsG0580025980.01.T01
Chr5 exon 28548195 28548443 28548195 ID=MsG0580025980.01.T01:exon:6953;Parent=MsG0580025980.01.T01
Chr5 exon 28548577 28548645 28548577 ID=MsG0580025980.01.T01:exon:6954;Parent=MsG0580025980.01.T01
Chr5 exon 28548779 28548834 28548779 ID=MsG0580025980.01.T01:exon:6955;Parent=MsG0580025980.01.T01
Chr5 exon 28549039 28549120 28549039 ID=MsG0580025980.01.T01:exon:6956;Parent=MsG0580025980.01.T01
Chr5 exon 28549354 28549565 28549354 ID=MsG0580025980.01.T01:exon:6957;Parent=MsG0580025980.01.T01
Chr5 exon 28549654 28549723 28549654 ID=MsG0580025980.01.T01:exon:6958;Parent=MsG0580025980.01.T01
Chr5 exon 28549889 28549959 28549889 ID=MsG0580025980.01.T01:exon:6959;Parent=MsG0580025980.01.T01
Chr5 exon 28551599 28551749 28551599 ID=MsG0580025980.01.T01:exon:6960;Parent=MsG0580025980.01.T01
Chr5 exon 28553074 28553380 28553074 ID=MsG0580025980.01.T01:exon:6961;Parent=MsG0580025980.01.T01
Chr5 exon 28553737 28554026 28553737 ID=MsG0580025980.01.T01:exon:6962;Parent=MsG0580025980.01.T01
Chr5 five_prime_UTR 28546913 28546953 28546913 ID=MsG0580025980.01.T01:five_prime_utr;Parent=MsG0580025980.01.T01
Chr5 CDS 28546954 28547144 28546954 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28547256 28547388 28547256 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28547512 28547760 28547512 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28547876 28548052 28547876 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28548195 28548443 28548195 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28548577 28548645 28548577 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28548779 28548834 28548779 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28549039 28549120 28549039 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28549354 28549565 28549354 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28549654 28549723 28549654 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28549889 28549959 28549889 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28551599 28551749 28551599 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28553074 28553380 28553074 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 CDS 28553737 28553810 28553737 ID=MsG0580025980.01.T01:cds;Parent=MsG0580025980.01.T01
Chr5 three_prime_UTR 28553811 28554026 28553811 ID=MsG0580025980.01.T01:three_prime_utr;Parent=MsG0580025980.01.T01
Gene Sequence

>MsG0580025980.01.T01

ATGATGAGAGTGAGAGATTTGTCTAAGTACGTCAACGGACGGGGTGGTGCGGTAGTTCGCATTGTTGTCGCAGGAGACTCTCGGACCGGTAAAACCAGCCTTGTTCTCGCTGCGGGCGCCTTTAAAATCCAGGTTAAGCTCGACCTGTGTTTTGGTGGTGTGCCAATCACAATCATAGACACCTCTTCCCGCGTTGAGGACAGTGATAGAGTTTCTGAAGAACTACAACGGGCTGACTCAGTTATTCTCACTTATGCATGTGACCGTCCTAAGACACTTCAAAATATAAGCACGTTTTGGCTTCCTCTTCTTCGCAAATTAGAGGTTAAAGTTCCGGTTATAGTGGTTGGCTGTAAGCTTGACCTTCTAGATGAAAATCAGTATGTGAGAGTAGAACCGATGATGTCACCACTAATGCAGAAGTTCTGTGAGATTGAATCATCACTAATGCAGAAGTTCGGTGAGATTGAATCATCACTAATGCAGAAGTTCAATGAGATTGAATCATCACTTATGCAGAAGTTCTGTGAGATTGAATCATGCATTGAGTGTTCAGCATATAGGAATACCGAGGTCACTGGAGTTTTCTTCTTAGCATTAAAGGCTGCCCTTTATCCTGTAGCTCCTTTATTTGATAAGGAATCAAAGACTCTAACGCCTCGATGTAAGCGGGCTTTGAAGCGGATTTTTATTCTTTGTGACCATGACAAAGATGGTGCCCTTAGCCATTGTGAACTGGATGGTTTTCAGGTTCAATGTTTCGATAGTCATTTGCTACCACGTGAGTTTTTTGTTATAAAGAAGGTTGTGAAAGAAAATTTGTCTGAAGGGGTGAATGAACGAGGACTTACATTGCCAGGATTTCTACTTCTTCATGCTCTTTTCTTCGAAAAAGGGACTCCTGAGAAAACATGGACTGTGCTCCGGAAATTTGGATATATTGATGATATCAAGCTCGCTGATGATTTCATTCTACATTTTATACGTGCACCTGATCAGAGTGTTGAATTGACAAATGAAGCAACTGATTACTTGAAGACAATCTTTGATGAATTTGATCGTGATTTTGATAAGGTGCTGCAACCTCACGAACTAGAAGAACTGTTTTCTACTGTCCCAAAAAGCCCTTGGATTGAAAATCCATACAAGGATGCCGTAGAAAGGAATGAATTTGGAGGACTATCACTTGATGCATTTTTGTCAGAGTGGGCACTCATGACACTTCTAAACCCGACCTTTAGTGTGGAGAACCTGATATACATTGGTTATCCTGGTGATCCATCATCTGCTATTCGTGTGACTAGGGGGCGACATGTAGATCGCCAAAAACAGCATTCAGAAAGAAATGTATTACAGTGCTTCATTTTTGGGCCTATGAAGGCAGGAAAATCTGCGTTATTGAATTCTTTCATTGGAAGGCCACATTCTGAAGCTCATAATCCAACCAATGAGGATCATTATGCTGTAAACGTTGTTGATATGTCGAGGGAAAACAAAAAGTATCTTGTGCTGAGAGAGATTTCTGATGGTGGAGTCTCAAAGTTGTTGGCCAACAAAGAGTCTGACGAGTCTTCATGGAAGGCATCATTTGAACTCTTGTTAAAAATTGCTGGTCATGGACAAGACACTGGCTATCAGGTGCCTTGTCTTATAGTTGAAGCTAAAGATGATCATGATTCATTTACAATGGCTATACAAGAGGCAACTATGGTAAGCAAGGACATGGGACGCAAGGACATGGGAGTAGAGTCTCCCATGCCAATCAGTGTGAAGTTTGGGGATTTCAACAATGTATATCGCCAAATTGTAACTGCTGCTGAGCACCCTCATTTAAGCATTCTAAACAATGAAGCTGGAAAAACCCACAAGCAGTACATGGGAGTAGAGACTCCCGTGCCAATCAGTGAAAAGTTAGGGGCTGTCAACAATATATTTCGCCGAATTGTAACTGCTGCTGAGCACCTTCATTTAAGCATAACAAAAATCCGCAAGCAGTACCCACCTTATATGTTTGTAGGTGGACTTGCAGTCGTTGTTCCAATTGGAATAACGGTTGCTGAAAATTGTTCCAATTGGAATAATGGTTGCTGA
Protein sequence

>MsG0580025980.01.T01

MMRVRDLSKYVNGRGGAVVRIVVAGDSRTGKTSLVLAAGAFKIQVKLDLCFGGVPITIIDTSSRVEDSDRVSEELQRADSVILTYACDRPKTLQNISTFWLPLLRKLEVKVPVIVVGCKLDLLDENQYVRVEPMMSPLMQKFCEIESSLMQKFGEIESSLMQKFNEIESSLMQKFCEIESCIECSAYRNTEVTGVFFLALKAALYPVAPLFDKESKTLTPRCKRALKRIFILCDHDKDGALSHCELDGFQVQCFDSHLLPREFFVIKKVVKENLSEGVNERGLTLPGFLLLHALFFEKGTPEKTWTVLRKFGYIDDIKLADDFILHFIRAPDQSVELTNEATDYLKTIFDEFDRDFDKVLQPHELEELFSTVPKSPWIENPYKDAVERNEFGGLSLDAFLSEWALMTLLNPTFSVENLIYIGYPGDPSSAIRVTRGRHVDRQKQHSERNVLQCFIFGPMKAGKSALLNSFIGRPHSEAHNPTNEDHYAVNVVDMSRENKKYLVLREISDGGVSKLLANKESDESSWKASFELLLKIAGHGQDTGYQVPCLIVEAKDDHDSFTMAIQEATMVSKDMGRKDMGVESPMPISVKFGDFNNVYRQIVTAAEHPHLSILNNEAGKTHKQYMGVETPVPISEKLGAVNNIFRRIVTAAEHLHLSITKIRKQYPPYMFVGGLAVVVPIGITVAENCSNWNNGC*