AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027596.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027596.01.T01 MTR_5g061860 91.734 496 19 1 1 474 1 496 0.0 907
MsG0580027596.01.T01 MTR_5g061860 91.734 496 19 1 1 474 1 496 0.0 907
MsG0580027596.01.T01 MTR_3g073730 72.188 489 108 3 7 474 19 500 0.0 691
MsG0580027596.01.T01 MTR_3g087740 62.781 489 164 3 2 474 12 498 0.0 613
MsG0580027596.01.T01 MTR_5g061880 54.379 491 194 5 11 474 10 497 3.42e-180 521
MsG0580027596.01.T01 MTR_3g073780 55.040 496 190 7 8 474 11 502 2.68e-174 502
MsG0580027596.01.T01 MTR_3g073780 55.040 496 190 7 8 474 11 502 6.35e-174 502
MsG0580027596.01.T01 MTR_3g073780 55.040 496 190 7 8 474 11 502 5.88e-173 502
MsG0580027596.01.T01 MTR_2g008470 55.189 424 173 2 67 474 79 501 3.17e-156 459
MsG0580027596.01.T01 MTR_2g008470 55.189 424 173 2 67 474 98 520 7.58e-156 459
MsG0580027596.01.T01 MTR_7g095430 48.922 464 218 3 28 474 23 484 2.14e-150 442
MsG0580027596.01.T01 MTR_2g102243 47.173 513 248 4 1 496 1 507 5.38e-150 441
MsG0580027596.01.T01 MTR_3g087730 48.269 491 222 6 10 474 19 503 1.34e-149 442
MsG0580027596.01.T01 MTR_7g095430 48.922 464 218 3 28 474 23 484 2.51e-149 442
MsG0580027596.01.T01 MTR_2g102243 47.173 513 248 4 1 496 1 507 2.92e-149 441
MsG0580027596.01.T01 MTR_1g071530 48.817 465 219 3 26 474 26 487 7.50e-149 441
MsG0580027596.01.T01 MTR_4g084620 47.425 466 223 4 28 474 22 484 6.71e-143 425
MsG0580027596.01.T01 MTR_4g011970 48.352 455 218 2 33 472 42 494 1.20e-140 419
MsG0580027596.01.T01 MTR_4g084640 47.122 469 220 6 28 474 26 488 6.12e-138 413
MsG0580027596.01.T01 MTR_6g086170 44.009 459 235 4 34 474 23 477 8.12e-131 394
MsG0580027596.01.T01 MTR_7g022870 33.937 442 251 8 65 484 68 490 2.29e-71 237
MsG0580027596.01.T01 MTR_7g022870 33.933 445 247 9 65 484 68 490 2.25e-70 238
MsG0580027596.01.T01 MTR_6g024420 42.222 90 41 1 252 341 88 166 1.66e-17 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027596.01.T01 AT5G10180 62.236 474 162 2 17 474 48 520 0.0 605
MsG0580027596.01.T01 AT1G77990 61.224 490 173 2 1 474 24 512 0.0 605
MsG0580027596.01.T01 AT4G08620 59.198 424 157 1 67 474 67 490 7.38e-171 497
MsG0580027596.01.T01 AT1G78000 56.926 462 172 5 29 468 33 489 6.83e-168 484
MsG0580027596.01.T01 AT1G78000 56.410 468 177 5 29 474 33 495 9.55e-168 487
MsG0580027596.01.T01 AT1G78000 56.410 468 177 5 29 474 33 495 1.37e-167 487
MsG0580027596.01.T01 AT1G78000 56.410 468 177 5 29 474 33 495 8.70e-167 486
MsG0580027596.01.T01 AT1G78000 56.410 468 177 5 29 474 33 495 8.70e-167 486
MsG0580027596.01.T01 AT1G78000 56.410 468 177 5 29 474 33 495 8.70e-167 486
MsG0580027596.01.T01 AT1G22150 52.749 491 210 4 3 474 11 498 1.96e-165 481
MsG0580027596.01.T01 AT1G22150 52.749 491 210 4 3 474 11 498 2.47e-164 480
MsG0580027596.01.T01 AT1G22150 52.749 491 210 4 3 474 11 498 2.47e-164 480
MsG0580027596.01.T01 AT1G22150 52.749 491 210 4 3 474 11 498 2.47e-164 480
MsG0580027596.01.T01 AT3G51895 48.632 475 223 3 17 474 16 486 8.56e-155 456
MsG0580027596.01.T01 AT3G51895 48.632 475 223 3 17 474 61 531 4.65e-154 456
MsG0580027596.01.T01 AT1G23090 49.002 451 211 3 34 468 17 464 5.46e-147 435
MsG0580027596.01.T01 AT3G15990 49.881 421 196 1 67 472 71 491 7.77e-143 425
MsG0580027596.01.T01 AT1G78000 59.167 360 131 1 131 474 1 360 1.99e-132 392
MsG0580027596.01.T01 AT4G02700 44.563 469 240 3 23 474 12 477 6.61e-128 387
MsG0580027596.01.T01 AT5G19600 43.656 465 241 5 27 474 21 481 6.88e-120 365
MsG0580027596.01.T01 AT1G23090 50.153 327 148 1 157 468 6 332 1.39e-107 329
MsG0580027596.01.T01 AT1G23090 50.153 327 148 1 157 468 6 332 1.39e-107 329
MsG0580027596.01.T01 AT1G23090 50.153 327 148 1 157 468 6 332 1.39e-107 329
MsG0580027596.01.T01 AT3G12520 32.494 437 266 8 64 484 60 483 6.50e-70 233
MsG0580027596.01.T01 AT3G12520 32.494 437 266 8 64 484 44 467 5.69e-69 233
MsG0580027596.01.T01 AT3G12520 32.494 437 266 8 64 484 60 483 7.62e-69 233
MsG0580027596.01.T01 AT5G13550 33.716 436 258 9 66 484 75 496 8.44e-68 230

Find 127 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTAATCCACCACCTTTA+TGG 0.108956 5:-63965919 MsG0580027596.01.T01:CDS
TCAGCAGCTCAAGGGTCTTT+TGG 0.158979 5:-63964902 MsG0580027596.01.T01:CDS
TATGTGTATGATTGATTAAT+TGG 0.211745 5:+63966132 None:intergenic
AGATCCGAGGTTGTTTATTT+TGG 0.232326 5:-63962610 MsG0580027596.01.T01:intron
TTCTTCTTATACTTCTGATA+TGG 0.239819 5:-63962642 MsG0580027596.01.T01:CDS
AAGATCATCTTTAAATTTAG+AGG 0.246239 5:+63965748 None:intergenic
GCAAAAGTTGATCCTCAATA+TGG 0.263537 5:-63965555 MsG0580027596.01.T01:CDS
ATCATCCTCTCTGCACTTCC+TGG 0.264410 5:-63963154 MsG0580027596.01.T01:CDS
TCAAAGGTCTAAGTGGGTTT+TGG 0.278056 5:-63965945 MsG0580027596.01.T01:CDS
ACTTGTCATGTCCATAATTA+TGG 0.280771 5:+63961983 None:intergenic
ATCAAGTTGGTATCCCTTAA+TGG 0.298692 5:+63963785 None:intergenic
TCGATCTTTCGCTTCCATTA+AGG 0.305846 5:-63963799 MsG0580027596.01.T01:CDS
CGATCTTTCGCTTCCATTAA+GGG 0.318570 5:-63963798 MsG0580027596.01.T01:CDS
GTTCACCAGTTACAATTTCA+TGG 0.318655 5:-63964007 MsG0580027596.01.T01:CDS
AATATCATAAAGCATGTTAA+AGG 0.323180 5:-63964049 MsG0580027596.01.T01:CDS
CTCATGAATGTTGATACTTC+TGG 0.326664 5:-63961876 MsG0580027596.01.T01:three_prime_UTR
TACTGACACTGCATCTGTTT+TGG 0.328385 5:+63964861 None:intergenic
ATTTGTTTCCAATCCTTGTT+TGG 0.328585 5:-63965787 MsG0580027596.01.T01:CDS
TAAACGAGGCTCGCTATATC+TGG 0.331634 5:-63963120 MsG0580027596.01.T01:CDS
TTCCATAAAGGTGGTGGATT+AGG 0.332541 5:+63965917 None:intergenic
GCAGGAGCAGCAATTATTAT+TGG 0.333796 5:-63964928 MsG0580027596.01.T01:CDS
GGTGAACTGAACTCTGATTT+AGG 0.353590 5:+63964023 None:intergenic
AAATGTCCGAGCCATAATTA+TGG 0.355181 5:-63961994 MsG0580027596.01.T01:three_prime_UTR
TTTGACCATGAAATTGTAAC+TGG 0.369435 5:+63964002 None:intergenic
GGTTATGTTACCACATTCAT+TGG 0.375070 5:+63966217 None:intergenic
GTCGGGCAAGCGGCTAAAAT+CGG 0.378249 5:-63963977 MsG0580027596.01.T01:CDS
TCTCTCATAGTTGAAGTGTT+TGG 0.381137 5:+63966007 None:intergenic
ATGTGTATGATTGATTAATT+GGG 0.382734 5:+63966133 None:intergenic
CTCTCATAGTTGAAGTGTTT+GGG 0.384647 5:+63966008 None:intergenic
CAAAATAGCTTCTTCCATAA+AGG 0.385915 5:+63965905 None:intergenic
GAGTATAGGTTATGCAAGTT+TGG 0.387878 5:-63965577 MsG0580027596.01.T01:CDS
CTTTCACATGCTGCACTAGT+TGG 0.405834 5:-63964958 MsG0580027596.01.T01:CDS
ATTAAGGGATACCAACTTGA+TGG 0.414778 5:-63963783 MsG0580027596.01.T01:CDS
TGCTGCACTAGTTGGATTCA+TGG 0.415965 5:-63964950 MsG0580027596.01.T01:CDS
ATGGGAATCATGAACATTGC+AGG 0.420675 5:-63963741 MsG0580027596.01.T01:CDS
GGTAAAGATAAAATCTCTAT+AGG 0.421050 5:+63965151 None:intergenic
TTGTTTGCATCTGTAGAGAT+TGG 0.421513 5:-63963046 MsG0580027596.01.T01:CDS
ACAAATTACTTCTGAAGAAA+AGG 0.421884 5:-63964809 MsG0580027596.01.T01:intron
TTTAATTGCTATCAATCGAC+AGG 0.423538 5:-63962793 MsG0580027596.01.T01:CDS
CACTTGAGGAATTGCATAAG+AGG 0.425184 5:-63961845 MsG0580027596.01.T01:three_prime_UTR
CAACACCATTCAATTTGCAT+TGG 0.426544 5:+63966101 None:intergenic
AACACCATTCAATTTGCATT+GGG 0.429585 5:+63966102 None:intergenic
ATCTATGACTTTGGTGACTA+AGG 0.430034 5:+63965193 None:intergenic
ACTTGTTTCCATGAGGCAAA+AGG 0.430159 5:+63965867 None:intergenic
ACTTCATGTTATGTGGCAAC+TGG 0.438145 5:-63963711 MsG0580027596.01.T01:intron
AGCTCAAGAGACATTGCAAT+TGG 0.438752 5:-63965248 MsG0580027596.01.T01:CDS
AGCAACAGGATCTATGACTT+TGG 0.447197 5:+63965184 None:intergenic
ATAGCCTTGCAAATAATTGC+AGG 0.448326 5:+63963209 None:intergenic
GATAGAAGAGGAGCAATTGC+AGG 0.455339 5:+63964127 None:intergenic
ATCCTTAACTTCATGTTATG+TGG 0.455966 5:-63963718 MsG0580027596.01.T01:CDS
ATTTGAATGTTGCAGAGTAT+AGG 0.456358 5:-63965591 MsG0580027596.01.T01:intron
TGCAAGTCTTTGCATACCTC+AGG 0.457344 5:-63965708 MsG0580027596.01.T01:intron
GAACAGAGAAATGTTATCAA+TGG 0.459387 5:-63963760 MsG0580027596.01.T01:CDS
TTAGACTTTCTTGCCTGCAT+TGG 0.459472 5:-63963085 MsG0580027596.01.T01:CDS
AACAGAGAAATGTTATCAAT+GGG 0.459697 5:-63963759 MsG0580027596.01.T01:CDS
AACAGATGCAGTGTCAGTAT+TGG 0.461498 5:-63964857 MsG0580027596.01.T01:CDS
TCTTTCAACCAAACAAGGAT+TGG 0.465606 5:+63965779 None:intergenic
TGCCACATAACATGAAGTTA+AGG 0.467761 5:+63963716 None:intergenic
AATTTCATGGTCAAAATGTC+GGG 0.469383 5:-63963994 MsG0580027596.01.T01:CDS
TCCTCTTATCTATGCTGTGA+TGG 0.469969 5:-63965273 MsG0580027596.01.T01:CDS
AAAAGTGTGTATGCTATTTG+AGG 0.475129 5:+63966191 None:intergenic
CAATTTCATGGTCAAAATGT+CGG 0.478921 5:-63963995 MsG0580027596.01.T01:CDS
TGAAATTTAAGGGAGTAACT+TGG 0.482466 5:-63962672 MsG0580027596.01.T01:intron
TAGGCATGAGGATTAGCAAC+AGG 0.484615 5:+63965170 None:intergenic
AGCTTCTTCCATAAAGGTGG+TGG 0.486801 5:+63965911 None:intergenic
TTTACCGTCACCTTCTTCAC+CGG 0.489549 5:-63965134 MsG0580027596.01.T01:CDS
CTTGTTTCCATGAGGCAAAA+GGG 0.491957 5:+63965868 None:intergenic
GACTAGTATCTTCAATATGA+AGG 0.492992 5:+63965975 None:intergenic
AGCATAGAAACTACAGCTAC+AGG 0.493510 5:+63965224 None:intergenic
ACAGCGGTTAATTTCAGTGC+AGG 0.495717 5:-63963283 MsG0580027596.01.T01:CDS
CCTCTTATCTATGCTGTGAT+GGG 0.508862 5:-63965272 MsG0580027596.01.T01:CDS
ATTGGGGTGGTGGCAGAAAG+AGG 0.512503 5:+63966150 None:intergenic
CAGAATACTGAAGTGGGTCG+TGG 0.517007 5:-63962048 MsG0580027596.01.T01:exon
GCCAACAAAAGCACCAATGC+AGG 0.519640 5:+63963072 None:intergenic
CCCATCACAGCATAGATAAG+AGG 0.520940 5:+63965272 None:intergenic
TATTGGTCTTCAGCAGCTCA+AGG 0.524877 5:-63964911 MsG0580027596.01.T01:CDS
TGTTCCTGCAATTATTTGCA+AGG 0.525199 5:-63963213 MsG0580027596.01.T01:CDS
GACATTCAAGAAACTGCTAA+AGG 0.527754 5:-63962017 MsG0580027596.01.T01:three_prime_UTR
TTCTGGAATTCTAGCACTTG+AGG 0.528230 5:-63961859 MsG0580027596.01.T01:three_prime_UTR
TTTCTCTGTTCCCATCAAGT+TGG 0.534665 5:+63963772 None:intergenic
GCACTAGTTGGATTCATGGC+AGG 0.544060 5:-63964946 MsG0580027596.01.T01:CDS
GCTATTATACTACACACCTA+TGG 0.550390 5:-63963191 MsG0580027596.01.T01:CDS
TCGTTTATATCAATTAATCC+AGG 0.551676 5:+63963136 None:intergenic
TACTTACACAAGCCATATTG+AGG 0.555818 5:+63965543 None:intergenic
TGATTGATTAATTGGGGTGG+TGG 0.556573 5:+63966140 None:intergenic
AAATAGATCAAAGGTCTAAG+TGG 0.556606 5:-63965952 MsG0580027596.01.T01:CDS
TTAAGGGATACCAACTTGAT+GGG 0.563184 5:-63963782 MsG0580027596.01.T01:CDS
ATTGGTCTTCAGCAGCTCAA+GGG 0.564571 5:-63964910 MsG0580027596.01.T01:CDS
TGCAAATTGAATGGTGTTGG+TGG 0.571605 5:-63966097 MsG0580027596.01.T01:five_prime_UTR
TGATCCCAATGCAAATTGAA+TGG 0.572436 5:-63966106 MsG0580027596.01.T01:five_prime_UTR
AGCAGTATCAAATATTGTGA+TGG 0.573209 5:-63963251 MsG0580027596.01.T01:CDS
TTGACATTAACCAATGAATG+TGG 0.574498 5:-63966227 MsG0580027596.01.T01:five_prime_UTR
ATACTAGTCAAATAGATCAA+AGG 0.578481 5:-63965961 MsG0580027596.01.T01:CDS
CTTGTTCCAGAATACTGAAG+TGG 0.586712 5:-63962055 MsG0580027596.01.T01:intron
GATAGTATAACTGATAGAAG+AGG 0.586926 5:+63964115 None:intergenic
AATAGATCAAAGGTCTAAGT+GGG 0.588708 5:-63965951 MsG0580027596.01.T01:CDS
ATCATAAAGCATGTTAAAGG+AGG 0.593706 5:-63964046 MsG0580027596.01.T01:CDS
CAATGCAAATTGAATGGTGT+TGG 0.594044 5:-63966100 MsG0580027596.01.T01:five_prime_UTR
TCATGTCCATAATTATGGCT+CGG 0.595542 5:+63961988 None:intergenic
TGTAATCTTTCAACCAAACA+AGG 0.596159 5:+63965774 None:intergenic
TTAATATTCACTTACAGTGA+GGG 0.596218 5:+63963934 None:intergenic
TGTGTATGATTGATTAATTG+GGG 0.598197 5:+63966134 None:intergenic
TTGGGGTGGTGGCAGAAAGA+GGG 0.603048 5:+63966151 None:intergenic
AATAGCTTCTTCCATAAAGG+TGG 0.611665 5:+63965908 None:intergenic
TGGTCAAAATGTCGGGCAAG+CGG 0.619742 5:-63963987 MsG0580027596.01.T01:CDS
GTATGATTGATTAATTGGGG+TGG 0.621006 5:+63966137 None:intergenic
ATAAAATCTCTATAGGCATG+AGG 0.624777 5:+63965158 None:intergenic
AAAGTGTGTATGCTATTTGA+GGG 0.625266 5:+63966192 None:intergenic
CATAAGAGGTTGCTTTCACG+CGG 0.629952 5:-63961831 MsG0580027596.01.T01:three_prime_UTR
CGAGGCTCGCTATATCTGGA+AGG 0.634343 5:-63963116 MsG0580027596.01.T01:CDS
TCTACCAAAATAAACAACCT+CGG 0.635607 5:+63962606 None:intergenic
ATTCAGGAAGCAATGGCTGT+TGG 0.636361 5:-63963822 MsG0580027596.01.T01:intron
AAACATAACTTGTTTCCATG+AGG 0.640202 5:+63965860 None:intergenic
TTGTTCCAGAATACTGAAGT+GGG 0.640774 5:-63962054 MsG0580027596.01.T01:intron
ATAGCAGCAAGGATAGCCAT+AGG 0.649305 5:+63963175 None:intergenic
ATCACAGCATAGATAAGAGG+AGG 0.652330 5:+63965275 None:intergenic
CAGAGAGGATGATAGCAGCA+AGG 0.653768 5:+63963164 None:intergenic
ACTTGTGATTCAGGAAGCAA+TGG 0.659142 5:-63963829 MsG0580027596.01.T01:intron
CAGAAGTATCAACATTCATG+AGG 0.662711 5:+63961877 None:intergenic
TGTGTATGCTATTTGAGGGG+TGG 0.663852 5:+63966196 None:intergenic
TTATCAAAAGCTGATAAACA+AGG 0.665338 5:-63964076 MsG0580027596.01.T01:CDS
TTAATTGCTATCAATCGACA+GGG 0.665787 5:-63962792 MsG0580027596.01.T01:intron
ATGGATCTCATAAAGATCCG+AGG 0.680838 5:-63962623 MsG0580027596.01.T01:CDS
AATTCCGGTGAAGAAGGTGA+CGG 0.696298 5:+63965130 None:intergenic
TGGATTAATTGATATAAACG+AGG 0.720823 5:-63963134 MsG0580027596.01.T01:CDS
AAGTGTGTATGCTATTTGAG+GGG 0.758692 5:+63966193 None:intergenic
TTAATCCAGGAAGTGCAGAG+AGG 0.761072 5:+63963149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAGAATAATATGAAAA+TGG + Chr5:63962433-63962452 None:intergenic 10.0%
!! TTAAAAAAAATTAATCAAAC+AGG - Chr5:63964696-63964715 MsG0580027596.01.T01:intron 10.0%
!!! AATATACCAATTTTTTATTT+TGG + Chr5:63963570-63963589 None:intergenic 10.0%
!!! TGATAAAGTTTAATTAATTT+TGG - Chr5:63963293-63963312 MsG0580027596.01.T01:CDS 10.0%
!!! TTTATTTTATCTTTTATCAT+AGG + Chr5:63964518-63964537 None:intergenic 10.0%
!! AAATATAAAGAAGAATCTTA+AGG + Chr5:63964722-63964741 None:intergenic 15.0%
!! AATACTACACATATATTATA+AGG + Chr5:63963435-63963454 None:intergenic 15.0%
!! TAAGCAAAAATAAATTCAAA+AGG + Chr5:63962637-63962656 None:intergenic 15.0%
!! TAATGATATCATATAATTTC+AGG - Chr5:63963870-63963889 MsG0580027596.01.T01:intron 15.0%
!! TTATCAGAACATAAATAAAA+TGG + Chr5:63963279-63963298 None:intergenic 15.0%
!! TTTCAAGAAAAATATGAAAA+CGG + Chr5:63964141-63964160 None:intergenic 15.0%
!! TTTCATTACTTACTATAAAT+CGG + Chr5:63963788-63963807 None:intergenic 15.0%
!!! AAACACAAACAAATATTTTA+GGG - Chr5:63963524-63963543 MsG0580027596.01.T01:intron 15.0%
!!! AGTAAAGAAATTTTTTTACA+TGG + Chr5:63963366-63963385 None:intergenic 15.0%
!!! TAAACACAAACAAATATTTT+AGG - Chr5:63963523-63963542 MsG0580027596.01.T01:intron 15.0%
!! AAAAAATTGGTATATTTGCA+AGG - Chr5:63963574-63963593 MsG0580027596.01.T01:intron 20.0%
!! AAATCTGATATGTTCAAATT+TGG - Chr5:63965183-63965202 MsG0580027596.01.T01:CDS 20.0%
!! AAGATCATCTTTAAATTTAG+AGG + Chr5:63962304-63962323 None:intergenic 20.0%
!! AATAATATGAAAATGGCTAT+AGG + Chr5:63962426-63962445 None:intergenic 20.0%
!! AATATCATAAAGCATGTTAA+AGG - Chr5:63964000-63964019 MsG0580027596.01.T01:CDS 20.0%
!! ATAGTAAGTAATGAAAATTC+TGG - Chr5:63963792-63963811 MsG0580027596.01.T01:CDS 20.0%
!! ATGCATATTATATAAGTTCT+AGG - Chr5:63965667-63965686 MsG0580027596.01.T01:intron 20.0%
!! ATGTGTATGATTGATTAATT+GGG + Chr5:63961919-63961938 None:intergenic 20.0%
!! TATGTGTATGATTGATTAAT+TGG + Chr5:63961920-63961939 None:intergenic 20.0%
!! TTCATTACTTACTATAAATC+GGG + Chr5:63963787-63963806 None:intergenic 20.0%
!! TTTATGTTGTGAATATTAGA+TGG - Chr5:63963465-63963484 MsG0580027596.01.T01:intron 20.0%
!!! AAACTAGTTGGTAATTTATA+AGG + Chr5:63963023-63963042 None:intergenic 20.0%
!!! AAACTGTGTAAATATGTTTT+TGG + Chr5:63963629-63963648 None:intergenic 20.0%
!!! AAATTTTACACATATTCGTA+TGG - Chr5:63965581-63965600 MsG0580027596.01.T01:intron 20.0%
!!! AACTAGTTGGTAATTTATAA+GGG + Chr5:63963022-63963041 None:intergenic 20.0%
!!! AGTAGTATAGATGTTTTTAT+TGG - Chr5:63963673-63963692 MsG0580027596.01.T01:intron 20.0%
!!! ATTTATCCTTCAATATTTTC+AGG - Chr5:63963047-63963066 MsG0580027596.01.T01:CDS 20.0%
!!! TTACTTTAGTTACTGATTAT+AGG + Chr5:63965100-63965119 None:intergenic 20.0%
!!! TTCTTTATATTTTTTGATGC+AGG - Chr5:63964730-63964749 MsG0580027596.01.T01:intron 20.0%
! AAAGTTCATTAATATTCGCA+AGG - Chr5:63965118-63965137 MsG0580027596.01.T01:CDS 25.0%
! AACAATATGAACTGTAGATA+AGG - Chr5:63965548-63965567 MsG0580027596.01.T01:intron 25.0%
! AACAGAGAAATGTTATCAAT+GGG - Chr5:63964290-63964309 MsG0580027596.01.T01:intron 25.0%
! AACTAAAATGAACACAAGTT+TGG + Chr5:63965146-63965165 None:intergenic 25.0%
! AAGTTCATTAATATTCGCAA+GGG - Chr5:63965119-63965138 MsG0580027596.01.T01:CDS 25.0%
! ACTTAACAAATGATCTAGAA+AGG - Chr5:63965930-63965949 MsG0580027596.01.T01:CDS 25.0%
! AGGTCTATTAAACAGAAATT+AGG + Chr5:63966155-63966174 None:intergenic 25.0%
! ATAAGGACTAAAAAAGCAAA+AGG + Chr5:63963418-63963437 None:intergenic 25.0%
! ATACTAGTCAAATAGATCAA+AGG - Chr5:63962088-63962107 MsG0580027596.01.T01:intron 25.0%
! CAAAATGTTGTCATTGTAAA+AGG - Chr5:63965616-63965635 MsG0580027596.01.T01:intron 25.0%
! CAAGGACCAAAATAAAAAAT+TGG - Chr5:63963561-63963580 MsG0580027596.01.T01:intron 25.0%
! CACTAAAAAACTAGATCAAT+AGG + Chr5:63965525-63965544 None:intergenic 25.0%
! CTTAACAAATGATCTAGAAA+GGG - Chr5:63965931-63965950 MsG0580027596.01.T01:CDS 25.0%
! CTTCTAATCATTCTTTCAAT+TGG - Chr5:63966111-63966130 MsG0580027596.01.T01:five_prime_UTR 25.0%
! GAAAAACTTGTATATTTGCA+TGG + Chr5:63963337-63963356 None:intergenic 25.0%
! GGATAAATAAACAAACTAGT+TGG + Chr5:63963035-63963054 None:intergenic 25.0%
! GGTAAAGATAAAATCTCTAT+AGG + Chr5:63962901-63962920 None:intergenic 25.0%
! TAACAAATTCATCTATAGCA+AGG + Chr5:63963835-63963854 None:intergenic 25.0%
! TCAGAACATAAATAAAATGG+TGG + Chr5:63963276-63963295 None:intergenic 25.0%
! TCATACAAGTTATGAAAATG+AGG + Chr5:63965209-63965228 None:intergenic 25.0%
! TCGTTTATATCAATTAATCC+AGG + Chr5:63964916-63964935 None:intergenic 25.0%
! TCTAAAAAGTCAAATGTATC+TGG - Chr5:63962584-63962603 MsG0580027596.01.T01:intron 25.0%
! TGGATTAATTGATATAAACG+AGG - Chr5:63964915-63964934 MsG0580027596.01.T01:CDS 25.0%
! TGTGTATGATTGATTAATTG+GGG + Chr5:63961918-63961937 None:intergenic 25.0%
! TTAATATTCACTTACAGTGA+GGG + Chr5:63964118-63964137 None:intergenic 25.0%
! TTATCAAAAGCTGATAAACA+AGG - Chr5:63963973-63963992 MsG0580027596.01.T01:CDS 25.0%
! TTCTTCTTATACTTCTGATA+TGG - Chr5:63965407-63965426 MsG0580027596.01.T01:intron 25.0%
!! AAAGGAACACAATTTGAAAT+TGG + Chr5:63965057-63965076 None:intergenic 25.0%
!! ACAAATTACTTCTGAAGAAA+AGG - Chr5:63963240-63963259 MsG0580027596.01.T01:CDS 25.0%
!! GAAGAAAGAAAAAACTTTTC+TGG - Chr5:63963896-63963915 MsG0580027596.01.T01:intron 25.0%
!! TTTAAAGATGATCTTTTAGC+TGG - Chr5:63962309-63962328 MsG0580027596.01.T01:intron 25.0%
!!! CTTATTTTCATAAGACCTTT+TGG + Chr5:63964592-63964611 None:intergenic 25.0%
!!! GAAAAGTTTTTTCTTTCTTC+TGG + Chr5:63963896-63963915 None:intergenic 25.0%
!!! GAGTCGTTTTTGAAATTTAA+GGG - Chr5:63965367-63965386 MsG0580027596.01.T01:intron 25.0%
!!! TGAGTCGTTTTTGAAATTTA+AGG - Chr5:63965366-63965385 MsG0580027596.01.T01:intron 25.0%
AAATAGATCAAAGGTCTAAG+TGG - Chr5:63962097-63962116 MsG0580027596.01.T01:intron 30.0%
AAATGCAGCTTGAAAAATTC+CGG + Chr5:63962937-63962956 None:intergenic 30.0%
AACACCATTCAATTTGCATT+GGG + Chr5:63961950-63961969 None:intergenic 30.0%
AACAGTTGAATCACTGTTTA+AGG - Chr5:63964420-63964439 MsG0580027596.01.T01:intron 30.0%
AATAGATCAAAGGTCTAAGT+GGG - Chr5:63962098-63962117 MsG0580027596.01.T01:intron 30.0%
AATTTCATGGTCAAAATGTC+GGG - Chr5:63964055-63964074 MsG0580027596.01.T01:CDS 30.0%
ACTTGTCATGTCCATAATTA+TGG + Chr5:63966069-63966088 None:intergenic 30.0%
AGCAGTATCAAATATTGTGA+TGG - Chr5:63964798-63964817 MsG0580027596.01.T01:intron 30.0%
AGTTCATTAATATTCGCAAG+GGG - Chr5:63965120-63965139 MsG0580027596.01.T01:CDS 30.0%
ATAAAATCTCTATAGGCATG+AGG + Chr5:63962894-63962913 None:intergenic 30.0%
ATATTGAGTAACATCACAGA+AGG + Chr5:63965815-63965834 None:intergenic 30.0%
ATCATAAAGCATGTTAAAGG+AGG - Chr5:63964003-63964022 MsG0580027596.01.T01:CDS 30.0%
ATCCTTAACTTCATGTTATG+TGG - Chr5:63964331-63964350 MsG0580027596.01.T01:intron 30.0%
ATCGATGTCAAAATCACATT+CGG + Chr5:63962714-63962733 None:intergenic 30.0%
ATTTGAATGTTGCAGAGTAT+AGG - Chr5:63962458-63962477 MsG0580027596.01.T01:intron 30.0%
ATTTGTTTCCAATCCTTGTT+TGG - Chr5:63962262-63962281 MsG0580027596.01.T01:intron 30.0%
CAAAATAGCTTCTTCCATAA+AGG + Chr5:63962147-63962166 None:intergenic 30.0%
CAATTTCATGGTCAAAATGT+CGG - Chr5:63964054-63964073 MsG0580027596.01.T01:CDS 30.0%
GAACAGAGAAATGTTATCAA+TGG - Chr5:63964289-63964308 MsG0580027596.01.T01:intron 30.0%
GACTAGTATCTTCAATATGA+AGG + Chr5:63962077-63962096 None:intergenic 30.0%
GATAGTATAACTGATAGAAG+AGG + Chr5:63963937-63963956 None:intergenic 30.0%
GTTAATATTCACTTACAGTG+AGG + Chr5:63964119-63964138 None:intergenic 30.0%
TATTACACTATGTGCATGTT+TGG - Chr5:63962664-63962683 MsG0580027596.01.T01:CDS 30.0%
TCTACCAAAATAAACAACCT+CGG + Chr5:63965446-63965465 None:intergenic 30.0%
TGAAATTTAAGGGAGTAACT+TGG - Chr5:63965377-63965396 MsG0580027596.01.T01:intron 30.0%
TGAGTTTCGTTACAATTTCT+AGG - Chr5:63966088-63966107 MsG0580027596.01.T01:five_prime_UTR 30.0%
TGCTAGTTATTGTGCAATAA+AGG + Chr5:63965075-63965094 None:intergenic 30.0%
TGTAATCTTTCAACCAAACA+AGG + Chr5:63962278-63962297 None:intergenic 30.0%
TTAATTGCTATCAATCGACA+GGG - Chr5:63965257-63965276 MsG0580027596.01.T01:CDS 30.0%
TTCAAAAGGTCAAATGTATC+TGG + Chr5:63962623-63962642 None:intergenic 30.0%
TTGACATTAACCAATGAATG+TGG - Chr5:63961822-63961841 MsG0580027596.01.T01:three_prime_UTR 30.0%
TTGCCTTTCTTTGACAAAAT+TGG + Chr5:63965908-63965927 None:intergenic 30.0%
TTTAATTGCTATCAATCGAC+AGG - Chr5:63965256-63965275 MsG0580027596.01.T01:CDS 30.0%
TTTGACCATGAAATTGTAAC+TGG + Chr5:63964050-63964069 None:intergenic 30.0%
! AAAAACGTTTTACACAAACG+TGG - Chr5:63965281-63965300 MsG0580027596.01.T01:CDS 30.0%
! AAAAGTGTGTATGCTATTTG+AGG + Chr5:63961861-63961880 None:intergenic 30.0%
! AAAGTGTGTATGCTATTTGA+GGG + Chr5:63961860-63961879 None:intergenic 30.0%
! AACAAAAGTTTTCTTGCACA+TGG - Chr5:63962222-63962241 MsG0580027596.01.T01:intron 30.0%
! AATGTATCTGGTCTGAATTT+TGG - Chr5:63962596-63962615 MsG0580027596.01.T01:intron 30.0%
! ATGAAAAGTTCTGACATACT+CGG + Chr5:63965479-63965498 None:intergenic 30.0%
! ATGCCAATTTTGTCAAAGAA+AGG - Chr5:63965902-63965921 MsG0580027596.01.T01:CDS 30.0%
! GTTTTCATAAGCTATCCAAA+AGG - Chr5:63964574-63964593 MsG0580027596.01.T01:intron 30.0%
! TCATACAGTGCTGTTATTAA+GGG + Chr5:63965963-63965982 None:intergenic 30.0%
! TGCAAGAAAACTTTTGTTCT+TGG + Chr5:63962220-63962239 None:intergenic 30.0%
! TTCATACAGTGCTGTTATTA+AGG + Chr5:63965964-63965983 None:intergenic 30.0%
! TTTTGACATCGATGTTTGTT+TGG - Chr5:63962721-63962740 MsG0580027596.01.T01:intron 30.0%
!! AAACATAACTTGTTTCCATG+AGG + Chr5:63962192-63962211 None:intergenic 30.0%
!!! ATCCTTCAATATTTTCAGGT+TGG - Chr5:63963051-63963070 MsG0580027596.01.T01:CDS 30.0%
!!! TCCTTCAATATTTTCAGGTT+GGG - Chr5:63963052-63963071 MsG0580027596.01.T01:CDS 30.0%
!!! TCTGTTTACTATTTTGACAG+TGG - Chr5:63963709-63963728 MsG0580027596.01.T01:intron 30.0%
!!! TTTTGGCTTAAATGTGTTCT+TGG - Chr5:63963310-63963329 MsG0580027596.01.T01:intron 30.0%
AAATGTCCGAGCCATAATTA+TGG - Chr5:63966055-63966074 MsG0580027596.01.T01:five_prime_UTR 35.0%
AACTAGAAGGAATATCAGGA+AGG + Chr5:63963763-63963782 None:intergenic 35.0%
AAGCACTTGTGAGACTATTT+AGG + Chr5:63964661-63964680 None:intergenic 35.0%
AATAGCTTCTTCCATAAAGG+TGG + Chr5:63962144-63962163 None:intergenic 35.0%
ACCCAACCTGAAAATATTGA+AGG + Chr5:63963056-63963075 None:intergenic 35.0%
AGGACTAAAAAAGCAAAAGG+TGG + Chr5:63963415-63963434 None:intergenic 35.0%
AGGGACTAAATAGAAAAGCA+AGG - Chr5:63963543-63963562 MsG0580027596.01.T01:intron 35.0%
ATTAAGGGATACCAACTTGA+TGG - Chr5:63964266-63964285 MsG0580027596.01.T01:intron 35.0%
CAAAAACGACTCATGAAACT+CGG + Chr5:63965359-63965378 None:intergenic 35.0%
CAACACCATTCAATTTGCAT+TGG + Chr5:63961951-63961970 None:intergenic 35.0%
CAATGCAAATTGAATGGTGT+TGG - Chr5:63961949-63961968 MsG0580027596.01.T01:intron 35.0%
CTATAAATCGGGTAACTAGA+AGG + Chr5:63963776-63963795 None:intergenic 35.0%
CTCATGAATGTTGATACTTC+TGG - Chr5:63966173-63966192 MsG0580027596.01.T01:five_prime_UTR 35.0%
GACATTCAAGAAACTGCTAA+AGG - Chr5:63966032-63966051 MsG0580027596.01.T01:five_prime_UTR 35.0%
GAGTATAGGTTATGCAAGTT+TGG - Chr5:63962472-63962491 MsG0580027596.01.T01:intron 35.0%
GCTATTATACTACACACCTA+TGG - Chr5:63964858-63964877 MsG0580027596.01.T01:CDS 35.0%
GGTTATGTTACCACATTCAT+TGG + Chr5:63961835-63961854 None:intergenic 35.0%
GTATATTTGCAACTTGCAAG+TGG + Chr5:63963393-63963412 None:intergenic 35.0%
GTATGATTGATTAATTGGGG+TGG + Chr5:63961915-63961934 None:intergenic 35.0%
GTTCACCAGTTACAATTTCA+TGG - Chr5:63964042-63964061 MsG0580027596.01.T01:CDS 35.0%
TACTTACACAAGCCATATTG+AGG + Chr5:63962509-63962528 None:intergenic 35.0%
TCATGTCCATAATTATGGCT+CGG + Chr5:63966064-63966083 None:intergenic 35.0%
TCTTTCAACCAAACAAGGAT+TGG + Chr5:63962273-63962292 None:intergenic 35.0%
TGATCCCAATGCAAATTGAA+TGG - Chr5:63961943-63961962 MsG0580027596.01.T01:intron 35.0%
TGATGTTACTCAATATCCGA+TGG - Chr5:63965819-63965838 MsG0580027596.01.T01:CDS 35.0%
TGCCACATAACATGAAGTTA+AGG + Chr5:63964336-63964355 None:intergenic 35.0%
TGTTCCTGCAATTATTTGCA+AGG - Chr5:63964836-63964855 MsG0580027596.01.T01:CDS 35.0%
TTAAGGGATACCAACTTGAT+GGG - Chr5:63964267-63964286 MsG0580027596.01.T01:intron 35.0%
TTGAAAAATTCCGGTGAAGA+AGG + Chr5:63962928-63962947 None:intergenic 35.0%
TTGTTCCAGAATACTGAAGT+GGG - Chr5:63965995-63966014 MsG0580027596.01.T01:CDS 35.0%
TTGTTTGCATCTGTAGAGAT+TGG - Chr5:63965003-63965022 MsG0580027596.01.T01:intron 35.0%
! AAGCTGCATTTGGTATTTTC+AGG - Chr5:63962946-63962965 MsG0580027596.01.T01:intron 35.0%
! AAGTGTGTATGCTATTTGAG+GGG + Chr5:63961859-63961878 None:intergenic 35.0%
! AGATCCGAGGTTGTTTATTT+TGG - Chr5:63965439-63965458 MsG0580027596.01.T01:intron 35.0%
! ATAGCCTTGCAAATAATTGC+AGG + Chr5:63964843-63964862 None:intergenic 35.0%
! ATCTATGACTTTGGTGACTA+AGG + Chr5:63962859-63962878 None:intergenic 35.0%
! CTATGTGCATGTTTGGAATT+AGG - Chr5:63962671-63962690 MsG0580027596.01.T01:intron 35.0%
! CTCTCATAGTTGAAGTGTTT+GGG + Chr5:63962044-63962063 None:intergenic 35.0%
! GCAAAAGTTGATCCTCAATA+TGG - Chr5:63962494-63962513 MsG0580027596.01.T01:intron 35.0%
! TCTCTCATAGTTGAAGTGTT+TGG + Chr5:63962045-63962064 None:intergenic 35.0%
!! ATCAAGTTGGTATCCCTTAA+TGG + Chr5:63964267-63964286 None:intergenic 35.0%
!! CAGAAGTATCAACATTCATG+AGG + Chr5:63966175-63966194 None:intergenic 35.0%
!!! GGAATTTTTCAAGCTGCATT+TGG - Chr5:63962936-63962955 MsG0580027596.01.T01:intron 35.0%
AACAGATGCAGTGTCAGTAT+TGG - Chr5:63963192-63963211 MsG0580027596.01.T01:CDS 40.0%
ACTTCATGTTATGTGGCAAC+TGG - Chr5:63964338-63964357 MsG0580027596.01.T01:intron 40.0%
ACTTGTGATTCAGGAAGCAA+TGG - Chr5:63964220-63964239 MsG0580027596.01.T01:intron 40.0%
ACTTGTTTCCATGAGGCAAA+AGG + Chr5:63962185-63962204 None:intergenic 40.0%
AGCAACAGGATCTATGACTT+TGG + Chr5:63962868-63962887 None:intergenic 40.0%
AGCATAGAAACTACAGCTAC+AGG + Chr5:63962828-63962847 None:intergenic 40.0%
AGCTCAAGAGACATTGCAAT+TGG - Chr5:63962801-63962820 MsG0580027596.01.T01:intron 40.0%
ATCACAGCATAGATAAGAGG+AGG + Chr5:63962777-63962796 None:intergenic 40.0%
ATGGATCTCATAAAGATCCG+AGG - Chr5:63965426-63965445 MsG0580027596.01.T01:intron 40.0%
ATGGGAATCATGAACATTGC+AGG - Chr5:63964308-63964327 MsG0580027596.01.T01:intron 40.0%
ATTTGCAAAGCAGAGTGAAC+CGG + Chr5:63965884-63965903 None:intergenic 40.0%
CACTTGAGGAATTGCATAAG+AGG - Chr5:63966204-63966223 MsG0580027596.01.T01:five_prime_UTR 40.0%
CCTCTTATCTATGCTGTGAT+GGG - Chr5:63962777-63962796 MsG0580027596.01.T01:intron 40.0%
CGATCTTTCGCTTCCATTAA+GGG - Chr5:63964251-63964270 MsG0580027596.01.T01:intron 40.0%
CTTCCTAGAATTTCTACTCC+AGG + Chr5:63965775-63965794 None:intergenic 40.0%
CTTGTTCCAGAATACTGAAG+TGG - Chr5:63965994-63966013 MsG0580027596.01.T01:CDS 40.0%
CTTGTTTCCATGAGGCAAAA+GGG + Chr5:63962184-63962203 None:intergenic 40.0%
GCAGGAGCAGCAATTATTAT+TGG - Chr5:63963121-63963140 MsG0580027596.01.T01:CDS 40.0%
GGGTAACTAGAAGGAATATC+AGG + Chr5:63963767-63963786 None:intergenic 40.0%
GGTGAACTGAACTCTGATTT+AGG + Chr5:63964029-63964048 None:intergenic 40.0%
GGTTCAATCATATTTCGCTG+TGG - Chr5:63965302-63965321 MsG0580027596.01.T01:intron 40.0%
TCCTCTTATCTATGCTGTGA+TGG - Chr5:63962776-63962795 MsG0580027596.01.T01:intron 40.0%
TCGATCTTTCGCTTCCATTA+AGG - Chr5:63964250-63964269 MsG0580027596.01.T01:intron 40.0%
TGATTGATTAATTGGGGTGG+TGG + Chr5:63961912-63961931 None:intergenic 40.0%
TGTTTCTTAGTGCATACCTG+AGG + Chr5:63962360-63962379 None:intergenic 40.0%
TTAGACTTTCTTGCCTGCAT+TGG - Chr5:63964964-63964983 MsG0580027596.01.T01:CDS 40.0%
TTTCTCTGTTCCCATCAAGT+TGG + Chr5:63964280-63964299 None:intergenic 40.0%
! AAAAGTTCTGACATACTCGG+AGG + Chr5:63965476-63965495 None:intergenic 40.0%
! AGTCCTCTGAATTTTGTCCT+GGG - Chr5:63963732-63963751 MsG0580027596.01.T01:CDS 40.0%
! CTTCTGAAGAAAAGGTGAGT+TGG - Chr5:63963248-63963267 MsG0580027596.01.T01:CDS 40.0%
! TACTGACACTGCATCTGTTT+TGG + Chr5:63963191-63963210 None:intergenic 40.0%
! TGCAAATTGAATGGTGTTGG+TGG - Chr5:63961952-63961971 MsG0580027596.01.T01:intron 40.0%
!! AGGTTCGTTTTCAAGAACAG+CGG - Chr5:63964750-63964769 MsG0580027596.01.T01:intron 40.0%
!! CTAATACAATCGATTCGACC+TGG - Chr5:63965754-63965773 MsG0580027596.01.T01:CDS 40.0%
!! TCAAAGGTCTAAGTGGGTTT+TGG - Chr5:63962104-63962123 MsG0580027596.01.T01:intron 40.0%
!! TTCCATAAAGGTGGTGGATT+AGG + Chr5:63962135-63962154 None:intergenic 40.0%
!! TTCTGGAATTCTAGCACTTG+AGG - Chr5:63966190-63966209 MsG0580027596.01.T01:five_prime_UTR 40.0%
!!! TTTCAGGTTGGGTTTTCTTG+TGG - Chr5:63963063-63963082 MsG0580027596.01.T01:CDS 40.0%
AATTCCGGTGAAGAAGGTGA+CGG + Chr5:63962922-63962941 None:intergenic 45.0%
ACAGCGGTTAATTTCAGTGC+AGG - Chr5:63964766-63964785 MsG0580027596.01.T01:intron 45.0%
AGCTTCTTCCATAAAGGTGG+TGG + Chr5:63962141-63962160 None:intergenic 45.0%
ATAGCAGCAAGGATAGCCAT+AGG + Chr5:63964877-63964896 None:intergenic 45.0%
ATATCAGGAAGGAACATCCC+AGG + Chr5:63963752-63963771 None:intergenic 45.0%
ATTCAGGAAGCAATGGCTGT+TGG - Chr5:63964227-63964246 MsG0580027596.01.T01:intron 45.0%
CATCCCAGGACAAAATTCAG+AGG + Chr5:63963738-63963757 None:intergenic 45.0%
CCCATCACAGCATAGATAAG+AGG + Chr5:63962780-63962799 None:intergenic 45.0%
CGACCTGGAGTAGAAATTCT+AGG - Chr5:63965769-63965788 MsG0580027596.01.T01:CDS 45.0%
CTCCTAATCCACCACCTTTA+TGG - Chr5:63962130-63962149 MsG0580027596.01.T01:intron 45.0%
CTTTCACATGCTGCACTAGT+TGG - Chr5:63963091-63963110 MsG0580027596.01.T01:CDS 45.0%
GATAGAAGAGGAGCAATTGC+AGG + Chr5:63963925-63963944 None:intergenic 45.0%
GGCATGTGAACTTGTGATTC+AGG - Chr5:63964211-63964230 MsG0580027596.01.T01:intron 45.0%
GTTGTGATTCGCATAAGCTC+CGG - Chr5:63965862-63965881 MsG0580027596.01.T01:CDS 45.0%
TAAACGAGGCTCGCTATATC+TGG - Chr5:63964929-63964948 MsG0580027596.01.T01:CDS 45.0%
TGCAAGTCTTTGCATACCTC+AGG - Chr5:63962341-63962360 MsG0580027596.01.T01:intron 45.0%
TGCTGCACTAGTTGGATTCA+TGG - Chr5:63963099-63963118 MsG0580027596.01.T01:CDS 45.0%
TTTACCGTCACCTTCTTCAC+CGG - Chr5:63962915-63962934 MsG0580027596.01.T01:intron 45.0%
! AAAGAGACCCTTTTGCCTCA+TGG - Chr5:63962174-63962193 MsG0580027596.01.T01:intron 45.0%
! CATAAGAGGTTGCTTTCACG+CGG - Chr5:63966218-63966237 MsG0580027596.01.T01:five_prime_UTR 45.0%
! GAGTCCTCTGAATTTTGTCC+TGG - Chr5:63963731-63963750 MsG0580027596.01.T01:CDS 45.0%
! TAGGCATGAGGATTAGCAAC+AGG + Chr5:63962882-63962901 None:intergenic 45.0%
! TGTGTATGCTATTTGAGGGG+TGG + Chr5:63961856-63961875 None:intergenic 45.0%
! TTAATCCAGGAAGTGCAGAG+AGG + Chr5:63964903-63964922 None:intergenic 45.0%
!! ATTGGTCTTCAGCAGCTCAA+GGG - Chr5:63963139-63963158 MsG0580027596.01.T01:CDS 45.0%
!! TATTGGTCTTCAGCAGCTCA+AGG - Chr5:63963138-63963157 MsG0580027596.01.T01:CDS 45.0%
!! TGACACTGCATCTGTTTTGG+TGG + Chr5:63963188-63963207 None:intergenic 45.0%
!! AAACAATATAATATATTTAT+AGG - Chr5:63963601-63963620 MsG0580027596.01.T01:intron 5.0%
!! AACAATATAATATATTTATA+GGG - Chr5:63963602-63963621 MsG0580027596.01.T01:intron 5.0%
ATCATCCTCTCTGCACTTCC+TGG - Chr5:63964895-63964914 MsG0580027596.01.T01:CDS 50.0%
ATGCGAATCACAACGATGCC+TGG + Chr5:63965856-63965875 None:intergenic 50.0%
CAATCACTAGTCAGAGTCGC+AGG + Chr5:63964192-63964211 None:intergenic 50.0%
CACGACCCACTTCAGTATTC+TGG + Chr5:63966003-63966022 None:intergenic 50.0%
CAGAATACTGAAGTGGGTCG+TGG - Chr5:63966001-63966020 MsG0580027596.01.T01:exon 50.0%
CAGAGAGGATGATAGCAGCA+AGG + Chr5:63964888-63964907 None:intergenic 50.0%
CCTGGTGTGCTTATTGCCAT+CGG + Chr5:63965838-63965857 None:intergenic 50.0%
CTGCGACTCTGACTAGTGAT+TGG - Chr5:63964190-63964209 MsG0580027596.01.T01:intron 50.0%
GCACTAGTTGGATTCATGGC+AGG - Chr5:63963103-63963122 MsG0580027596.01.T01:CDS 50.0%
TGGTCAAAATGTCGGGCAAG+CGG - Chr5:63964062-63964081 MsG0580027596.01.T01:CDS 50.0%
! AGCAGCTCAAGGGTCTTTTG+GGG - Chr5:63963149-63963168 MsG0580027596.01.T01:CDS 50.0%
! CAGCAGCTCAAGGGTCTTTT+GGG - Chr5:63963148-63963167 MsG0580027596.01.T01:CDS 50.0%
! TCAGCAGCTCAAGGGTCTTT+TGG - Chr5:63963147-63963166 MsG0580027596.01.T01:CDS 50.0%
!! GCCAACAAAAGCACCAATGC+AGG + Chr5:63964980-63964999 None:intergenic 50.0%
!! GCCTGCATTGGTGCTTTTGT+TGG - Chr5:63964976-63964995 MsG0580027596.01.T01:CDS 50.0%
CCGATGGCAATAAGCACACC+AGG - Chr5:63965835-63965854 MsG0580027596.01.T01:CDS 55.0%
CGAGGCTCGCTATATCTGGA+AGG - Chr5:63964933-63964952 MsG0580027596.01.T01:CDS 55.0%
GTCGGGCAAGCGGCTAAAAT+CGG - Chr5:63964072-63964091 MsG0580027596.01.T01:CDS 55.0%
! ATTGGGGTGGTGGCAGAAAG+AGG + Chr5:63961902-63961921 None:intergenic 55.0%
! TTGGGGTGGTGGCAGAAAGA+GGG + Chr5:63961901-63961920 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 63961809 63966262 63961809 ID=MsG0580027596.01;Name=MsG0580027596.01
Chr5 mRNA 63961809 63966262 63961809 ID=MsG0580027596.01.T01;Parent=MsG0580027596.01;Name=MsG0580027596.01.T01;_AED=0.33;_eAED=0.37;_QI=248|0.6|0.72|1|1|1|11|174|499
Chr5 exon 63961809 63961900 63961809 ID=MsG0580027596.01.T01:exon:4160;Parent=MsG0580027596.01.T01
Chr5 exon 63961985 63962067 63961985 ID=MsG0580027596.01.T01:exon:4159;Parent=MsG0580027596.01.T01
Chr5 exon 63962611 63962683 63962611 ID=MsG0580027596.01.T01:exon:4158;Parent=MsG0580027596.01.T01
Chr5 exon 63962793 63962817 63962793 ID=MsG0580027596.01.T01:exon:4157;Parent=MsG0580027596.01.T01
Chr5 exon 63963033 63963319 63963033 ID=MsG0580027596.01.T01:exon:4156;Parent=MsG0580027596.01.T01
Chr5 exon 63963712 63963838 63963712 ID=MsG0580027596.01.T01:exon:4155;Parent=MsG0580027596.01.T01
Chr5 exon 63963949 63964179 63963949 ID=MsG0580027596.01.T01:exon:4154;Parent=MsG0580027596.01.T01
Chr5 exon 63964810 63965002 63964810 ID=MsG0580027596.01.T01:exon:4153;Parent=MsG0580027596.01.T01
Chr5 exon 63965104 63965311 63965104 ID=MsG0580027596.01.T01:exon:4152;Parent=MsG0580027596.01.T01
Chr5 exon 63965550 63965598 63965550 ID=MsG0580027596.01.T01:exon:4151;Parent=MsG0580027596.01.T01
Chr5 exon 63965709 63966262 63965709 ID=MsG0580027596.01.T01:exon:4150;Parent=MsG0580027596.01.T01
Chr5 five_prime_UTR 63966015 63966262 63966015 ID=MsG0580027596.01.T01:five_prime_utr;Parent=MsG0580027596.01.T01
Chr5 CDS 63965709 63966014 63965709 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63965550 63965598 63965550 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63965104 63965311 63965104 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63964810 63965002 63964810 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63963949 63964179 63963949 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63963712 63963838 63963712 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63963033 63963319 63963033 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63962793 63962817 63962793 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63962611 63962683 63962611 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 CDS 63962067 63962067 63962067 ID=MsG0580027596.01.T01:cds;Parent=MsG0580027596.01.T01
Chr5 three_prime_UTR 63961985 63962066 63961985 ID=MsG0580027596.01.T01:three_prime_utr;Parent=MsG0580027596.01.T01
Chr5 three_prime_UTR 63961809 63961900 63961809 ID=MsG0580027596.01.T01:three_prime_utr;Parent=MsG0580027596.01.T01
Gene Sequence

>MsG0580027596.01.T01

ATGAGAGATCAAAGAGTCCTTCATATTGAAGATACTAGTCAAATAGATCAAAGGTCTAAGTGGGTTTTGGATTCTCCTAATCCACCACCTTTATGGAAGAAGCTATTTTGTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAGTTATGTTTCTCATCCAAGAACAAAAGTTTTCTTGCACATGGTTATTCATTCTTGCAGAATTTGTTTCCAATCCTTGTTTGGTTGAAAGATTACACTGCCTCTAAATTTAAAGATGATCTTTTAGCTGGTTTAACTCTTGCAAGTCTTTGCATACCTCAGAGTATAGGTTATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCTTGTATACAAGTATTGTTCCTCCTCTTATCTATGCTGTGATGGGAAGCTCAAGAGACATTGCAATTGGACCTGTAGCTGTAGTTTCTATGCTGTTATCTACCTTAGTCACCAAAGTCATAGATCCTGTTGCTAATCCTCATGCCTATAGAGATTTTATCTTTACCGTCACCTTCTTCACCGGAATTTTTCAAGCTGCATTTGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTCATGGCAGGAGCAGCAATTATTATTGGTCTTCAGCAGCTCAAGGGTCTTTTGGGGATTACTCACTTCACCACCAAAACAGATGCAGTGTCAGTATTGGTTTCTGTCTATAAGTCATTACATCAACAAATTACTTCTGAAGAAAAGGCCAGAAGAAAGAAAAAACTTTTCTGGTTGCCTGCAATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTATCAAAAGCTGATAAACAAGGAATTAATATCATAAAGCATGTTAAAGGAGGCCTAAATCAGAGTTCAGTTCACCAGTTACAATTTCATGGTCAAAATGTCGGGCAAGCGGCTAAAATCGGATTAGTCTGCGCAGTTATCGCCCTCACTGAAGCAATGGCTGTTGGTCGATCTTTCGCTTCCATTAAGGGATACCAACTTGATGGGAACAGAGAAATGTTATCAATGGGAATCATGAACATTGCAGGATCCTTAACTTCATGTTATGTGGCAACTGGTTCGTTTTCAAGAACAGCGGTTAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCAATTACTGTGATTTTGTTCCTGCAATTATTTGCAAGGCTATTATACTACACACCTATGGCTATCCTTGCTGCTATCATCCTCTCTGCACTTCCTGGATTAATTGATATAAACGAGGCTCGCTATATCTGGAAGGTCGACAAATTAGACTTTCTTGCCTGCATTGGTGCTTTTGTTGGCGTCTTGTTTGCATCTGTAGAGATTGGTCTGCTAGTTGCAATTTTAATTGCTATCAATCGACAGGGGAGTAACTTGGTAATTCATTCTTCTTATACTTCTGATATGGATCTCATAAAGATCCGAGGTTGTTTATTTTGA
Protein sequence

>MsG0580027596.01.T01

MRDQRVLHIEDTSQIDQRSKWVLDSPNPPPLWKKLFCSLKETLLPHGNKLCFSSKNKSFLAHGYSFLQNLFPILVWLKDYTASKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSTLVTKVIDPVANPHAYRDFIFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVLVSVYKSLHQQITSEEKARRKKKLFWLPAIAPLLSVILSTLIVYLSKADKQGINIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMLSMGIMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAILIAINRQGSNLVIHSSYTSDMDLIKIRGCLF*