Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014132.01.T01 | XP_003600057.1 | 95.63 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0 | 784 |
| MsG0380014132.01.T02 | XP_003600057.1 | 95.63 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014132.01.T01 | Q9LJU7 | 75.835 | 389 | 94 | 0 | 6 | 394 | 49 | 437 | 0 | 647 |
| MsG0380014132.01.T02 | Q9LJU7 | 75.835 | 389 | 94 | 0 | 6 | 394 | 49 | 437 | 0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014132.01.T01 | G7IXK7 | 95.630 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0.0 | 784 |
| MsG0380014132.01.T02 | G7IXK7 | 95.630 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048996.01 | MsG0380014132.01 | 0.815627 | 8.391244e-52 | 5.815832e-49 |
| MsG0080049140.01 | MsG0380014132.01 | 0.820975 | 5.161572e-53 | 4.145935e-50 |
| MsG0180000111.01 | MsG0380014132.01 | 0.818070 | 2.374090e-52 | 1.759103e-49 |
| MsG0180000373.01 | MsG0380014132.01 | 0.820249 | 7.580761e-53 | 5.966851e-50 |
| MsG0180002211.01 | MsG0380014132.01 | 0.801353 | 9.370957e-49 | 4.465722e-46 |
| MsG0180002421.01 | MsG0380014132.01 | 0.843664 | 1.219067e-58 | 1.921083e-55 |
| MsG0180003427.01 | MsG0380014132.01 | 0.865766 | 4.653842e-65 | 1.531963e-61 |
| MsG0180004661.01 | MsG0380014132.01 | 0.801858 | 7.383497e-49 | 3.563898e-46 |
| MsG0180005002.01 | MsG0380014132.01 | 0.800324 | 1.520552e-48 | 7.059855e-46 |
| MsG0280006311.01 | MsG0380014132.01 | 0.817606 | 3.023015e-52 | 2.211616e-49 |
| MsG0280010779.01 | MsG0380014132.01 | 0.841766 | 3.893079e-58 | 5.779068e-55 |
| MsG0280011282.01 | MsG0380014132.01 | 0.810708 | 1.007518e-50 | 6.117436e-48 |
| MsG0280011399.01 | MsG0380014132.01 | 0.858289 | 9.125969e-63 | 2.317603e-59 |
| MsG0380013636.01 | MsG0380014132.01 | 0.830960 | 2.187834e-55 | 2.340753e-52 |
| MsG0380014130.01 | MsG0380014132.01 | 0.860629 | 1.808014e-63 | 4.974495e-60 |
| MsG0380014132.01 | MsG0380014594.01 | 0.848977 | 4.343662e-60 | 8.112676e-57 |
| MsG0380014132.01 | MsG0380014754.01 | 0.803119 | 4.058208e-49 | 2.022645e-46 |
| MsG0380014132.01 | MsG0380014869.01 | 0.815460 | 9.138808e-52 | 6.304896e-49 |
| MsG0380014132.01 | MsG0380014881.01 | 0.822257 | 2.609594e-53 | 2.172963e-50 |
| MsG0380014132.01 | MsG0380015548.01 | 0.869123 | 3.920068e-66 | 1.454281e-62 |
| MsG0380014132.01 | MsG0380016703.01 | 0.861706 | 8.498627e-64 | 2.425800e-60 |
| MsG0380014132.01 | MsG0380017159.01 | 0.823243 | 1.538362e-53 | 1.317301e-50 |
| MsG0380014132.01 | MsG0380017164.01 | 0.803544 | 3.313547e-49 | 1.669768e-46 |
| MsG0380014132.01 | MsG0380017239.01 | 0.802993 | 4.309149e-49 | 2.140776e-46 |
| MsG0380014132.01 | MsG0380017819.01 | 0.839933 | 1.177680e-57 | 1.651476e-54 |
| MsG0380014132.01 | MsG0480018397.01 | 0.821993 | 3.003795e-53 | 2.482382e-50 |
| MsG0380014132.01 | MsG0480018918.01 | 0.822917 | 1.833144e-53 | 1.555376e-50 |
| MsG0380014132.01 | MsG0480018919.01 | 0.826201 | 3.088825e-54 | 2.877383e-51 |
| MsG0380014132.01 | MsG0480019635.01 | 0.862907 | 3.634411e-64 | 1.082016e-60 |
| MsG0380014132.01 | MsG0480019699.01 | 0.829484 | 5.017994e-55 | 5.142531e-52 |
| MsG0380014132.01 | MsG0480020965.01 | 0.817085 | 3.958424e-52 | 2.854996e-49 |
| MsG0380014132.01 | MsG0480021013.01 | 0.831210 | 1.899247e-55 | 2.047053e-52 |
| MsG0380014132.01 | MsG0480022273.01 | 0.801885 | 7.290440e-49 | 3.521441e-46 |
| MsG0380014132.01 | MsG0480022313.01 | 0.804550 | 2.047130e-49 | 1.058530e-46 |
| MsG0380014132.01 | MsG0480022325.01 | 0.800788 | 1.222847e-48 | 5.744429e-46 |
| MsG0380014132.01 | MsG0480022331.01 | 0.865989 | 3.956132e-65 | 1.312547e-61 |
| MsG0380014132.01 | MsG0480022873.01 | 0.809563 | 1.778746e-50 | 1.047850e-47 |
| MsG0380014132.01 | MsG0480023541.01 | 0.834960 | 2.215608e-56 | 2.670960e-53 |
| MsG0380014132.01 | MsG0580024109.01 | 0.810692 | 1.015834e-50 | 6.165082e-48 |
| MsG0380014132.01 | MsG0580024478.01 | 0.803353 | 3.629464e-49 | 1.819849e-46 |
| MsG0380014132.01 | MsG0580024489.01 | 0.804714 | 1.891891e-49 | 9.824692e-47 |
| MsG0380014132.01 | MsG0580024758.01 | 0.864596 | 1.084855e-64 | 3.425281e-61 |
| MsG0380014132.01 | MsG0580025766.01 | 0.810931 | 9.018038e-51 | 5.508473e-48 |
| MsG0380014132.01 | MsG0580026186.01 | 0.856909 | 2.338503e-62 | 5.669377e-59 |
| MsG0380014132.01 | MsG0580027596.01 | 0.809472 | 1.860859e-50 | 1.093524e-47 |
| MsG0380014132.01 | MsG0580027954.01 | 0.801989 | 6.938661e-49 | 3.360199e-46 |
| MsG0380014132.01 | MsG0580029298.01 | 0.867719 | 1.112067e-65 | 3.921019e-62 |
| MsG0380014132.01 | MsG0680030763.01 | 0.802400 | 5.711704e-49 | 2.795290e-46 |
| MsG0380014132.01 | MsG0680031384.01 | 0.816739 | 4.735286e-52 | 3.383024e-49 |
| MsG0380014132.01 | MsG0680031386.01 | 0.836748 | 7.803583e-57 | 9.926391e-54 |
| MsG0380014132.01 | MsG0680034598.01 | 0.830949 | 2.201973e-55 | 2.355109e-52 |
| MsG0380014132.01 | MsG0680035349.01 | 0.845480 | 3.956055e-59 | 6.601816e-56 |
| MsG0380014132.01 | MsG0780039861.01 | 0.803676 | 3.111817e-49 | 1.573282e-46 |
| MsG0380014132.01 | MsG0780040896.01 | 0.827160 | 1.823833e-54 | 1.746509e-51 |
| MsG0380014132.01 | MsG0780041063.01 | 0.853658 | 2.066034e-61 | 4.496823e-58 |
| MsG0380014132.01 | MsG0780041271.01 | 0.824835 | 6.508354e-54 | 5.831485e-51 |
| MsG0380014132.01 | MsG0880042791.01 | 0.817573 | 3.074837e-52 | 2.247495e-49 |
| MsG0380014132.01 | MsG0880042845.01 | 0.812835 | 3.471654e-51 | 2.230349e-48 |
| MsG0380014132.01 | MsG0880043951.01 | 0.803535 | 3.327663e-49 | 1.676503e-46 |
| MsG0380014132.01 | MsG0880045890.01 | 0.821726 | 3.463371e-53 | 2.840550e-50 |
| MsG0380014132.01 | MsG0880046922.01 | 0.817104 | 3.919913e-52 | 2.828694e-49 |
| MsG0280008280.01 | MsG0380014132.01 | 0.811125 | 8.185747e-51 | 5.025322e-48 |
| MsG0280008407.01 | MsG0380014132.01 | 0.824769 | 6.743859e-54 | 6.031424e-51 |
| MsG0280009118.01 | MsG0380014132.01 | 0.828746 | 7.576080e-55 | 7.597274e-52 |
| MsG0280009514.01 | MsG0380014132.01 | 0.804497 | 2.099795e-49 | 1.084268e-46 |
| MsG0280010303.01 | MsG0380014132.01 | 0.822793 | 1.958378e-53 | 1.655817e-50 |
| MsG0280010352.01 | MsG0380014132.01 | 0.804881 | 1.745787e-49 | 9.105809e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041115.01 | MsG0380014132.01 | PPI |
| MsG0780041115.01 | MsG0380014132.01 | PPI |
| MsG0380014132.01 | MsG0180003365.01 | PPI |
| MsG0380014132.01 | MsG0180003365.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014132.01.T01 | MTR_3g051240 | 95.630 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0.0 | 784 |
| MsG0380014132.01.T01 | MTR_5g092360 | 81.491 | 389 | 72 | 0 | 6 | 394 | 51 | 439 | 0.0 | 689 |
| MsG0380014132.01.T01 | MTR_1g060360 | 62.435 | 386 | 143 | 2 | 6 | 389 | 48 | 433 | 0.0 | 521 |
| MsG0380014132.01.T01 | MTR_7g104330 | 61.140 | 386 | 148 | 2 | 6 | 389 | 56 | 441 | 0.0 | 520 |
| MsG0380014132.01.T01 | MTR_7g104360 | 61.067 | 375 | 142 | 3 | 6 | 377 | 49 | 422 | 8.24e-168 | 476 |
| MsG0380014132.01.T01 | MTR_4g115670 | 42.754 | 414 | 208 | 8 | 6 | 393 | 57 | 467 | 1.13e-101 | 310 |
| MsG0380014132.01.T01 | MTR_0188s0020 | 44.275 | 393 | 191 | 10 | 6 | 371 | 63 | 454 | 5.28e-100 | 305 |
| MsG0380014132.01.T01 | MTR_6g013050 | 37.736 | 477 | 203 | 9 | 6 | 391 | 73 | 546 | 1.73e-95 | 297 |
| MsG0380014132.01.T01 | MTR_3g083810 | 39.254 | 456 | 184 | 8 | 6 | 371 | 73 | 525 | 6.55e-95 | 294 |
| MsG0380014132.01.T01 | MTR_4g037105 | 42.494 | 393 | 198 | 9 | 6 | 371 | 57 | 448 | 8.56e-95 | 291 |
| MsG0380014132.01.T01 | MTR_7g056403 | 38.377 | 456 | 188 | 8 | 6 | 371 | 72 | 524 | 6.11e-94 | 292 |
| MsG0380014132.01.T01 | MTR_3g083820 | 39.121 | 455 | 188 | 9 | 6 | 372 | 73 | 526 | 3.96e-93 | 290 |
| MsG0380014132.01.T01 | MTR_1g112630 | 41.624 | 394 | 201 | 9 | 6 | 371 | 58 | 450 | 2.61e-91 | 283 |
| MsG0380014132.01.T01 | MTR_6g013050 | 37.907 | 430 | 175 | 8 | 6 | 346 | 73 | 499 | 3.43e-85 | 269 |
| MsG0380014132.01.T01 | MTR_1g052505 | 30.746 | 335 | 182 | 12 | 17 | 308 | 209 | 536 | 2.46e-35 | 137 |
| MsG0380014132.01.T01 | MTR_4g037670 | 29.518 | 332 | 187 | 9 | 17 | 308 | 231 | 555 | 6.95e-35 | 136 |
| MsG0380014132.01.T01 | MTR_3g074930 | 25.293 | 427 | 252 | 13 | 15 | 380 | 199 | 619 | 4.67e-25 | 107 |
| MsG0380014132.01.T01 | MTR_3g074930 | 25.293 | 427 | 252 | 13 | 15 | 380 | 192 | 612 | 1.56e-24 | 105 |
| MsG0380014132.01.T01 | MTR_5g092450 | 60.000 | 80 | 12 | 1 | 267 | 346 | 8 | 67 | 3.67e-24 | 95.5 |
| MsG0380014132.01.T01 | MTR_4g082930 | 26.392 | 413 | 226 | 13 | 6 | 343 | 146 | 555 | 4.07e-23 | 102 |
| MsG0380014132.01.T01 | MTR_3g074970 | 24.819 | 415 | 220 | 13 | 17 | 380 | 143 | 516 | 1.00e-22 | 100 |
| MsG0380014132.01.T01 | MTR_5g092300 | 67.742 | 62 | 20 | 0 | 323 | 384 | 9 | 70 | 1.20e-22 | 91.3 |
| MsG0380014132.01.T01 | MTR_4g103520 | 25.135 | 370 | 222 | 10 | 60 | 380 | 176 | 539 | 1.76e-22 | 99.8 |
| MsG0380014132.01.T01 | MTR_4g103520 | 25.135 | 370 | 222 | 10 | 60 | 380 | 253 | 616 | 1.87e-22 | 99.8 |
| MsG0380014132.01.T01 | MTR_5g045600 | 24.747 | 396 | 239 | 12 | 35 | 380 | 222 | 608 | 1.12e-21 | 97.4 |
| MsG0380014132.01.T01 | MTR_8g063080 | 26.016 | 369 | 220 | 12 | 60 | 380 | 238 | 601 | 5.39e-21 | 95.5 |
| MsG0380014132.01.T01 | MTR_4g082940 | 30.469 | 256 | 131 | 8 | 131 | 343 | 290 | 541 | 3.25e-20 | 93.2 |
| MsG0380014132.01.T02 | MTR_3g051240 | 95.630 | 389 | 17 | 0 | 6 | 394 | 45 | 433 | 0.0 | 784 |
| MsG0380014132.01.T02 | MTR_5g092360 | 81.491 | 389 | 72 | 0 | 6 | 394 | 51 | 439 | 0.0 | 689 |
| MsG0380014132.01.T02 | MTR_1g060360 | 62.435 | 386 | 143 | 2 | 6 | 389 | 48 | 433 | 0.0 | 521 |
| MsG0380014132.01.T02 | MTR_7g104330 | 61.140 | 386 | 148 | 2 | 6 | 389 | 56 | 441 | 0.0 | 520 |
| MsG0380014132.01.T02 | MTR_7g104360 | 61.067 | 375 | 142 | 3 | 6 | 377 | 49 | 422 | 8.24e-168 | 476 |
| MsG0380014132.01.T02 | MTR_4g115670 | 42.754 | 414 | 208 | 8 | 6 | 393 | 57 | 467 | 1.13e-101 | 310 |
| MsG0380014132.01.T02 | MTR_0188s0020 | 44.275 | 393 | 191 | 10 | 6 | 371 | 63 | 454 | 5.28e-100 | 305 |
| MsG0380014132.01.T02 | MTR_6g013050 | 37.736 | 477 | 203 | 9 | 6 | 391 | 73 | 546 | 1.73e-95 | 297 |
| MsG0380014132.01.T02 | MTR_3g083810 | 39.254 | 456 | 184 | 8 | 6 | 371 | 73 | 525 | 6.55e-95 | 294 |
| MsG0380014132.01.T02 | MTR_4g037105 | 42.494 | 393 | 198 | 9 | 6 | 371 | 57 | 448 | 8.56e-95 | 291 |
| MsG0380014132.01.T02 | MTR_7g056403 | 38.377 | 456 | 188 | 8 | 6 | 371 | 72 | 524 | 6.11e-94 | 292 |
| MsG0380014132.01.T02 | MTR_3g083820 | 39.121 | 455 | 188 | 9 | 6 | 372 | 73 | 526 | 3.96e-93 | 290 |
| MsG0380014132.01.T02 | MTR_1g112630 | 41.624 | 394 | 201 | 9 | 6 | 371 | 58 | 450 | 2.61e-91 | 283 |
| MsG0380014132.01.T02 | MTR_6g013050 | 37.907 | 430 | 175 | 8 | 6 | 346 | 73 | 499 | 3.43e-85 | 269 |
| MsG0380014132.01.T02 | MTR_1g052505 | 30.746 | 335 | 182 | 12 | 17 | 308 | 209 | 536 | 2.46e-35 | 137 |
| MsG0380014132.01.T02 | MTR_4g037670 | 29.518 | 332 | 187 | 9 | 17 | 308 | 231 | 555 | 6.95e-35 | 136 |
| MsG0380014132.01.T02 | MTR_3g074930 | 25.293 | 427 | 252 | 13 | 15 | 380 | 199 | 619 | 4.67e-25 | 107 |
| MsG0380014132.01.T02 | MTR_3g074930 | 25.293 | 427 | 252 | 13 | 15 | 380 | 192 | 612 | 1.56e-24 | 105 |
| MsG0380014132.01.T02 | MTR_5g092450 | 60.000 | 80 | 12 | 1 | 267 | 346 | 8 | 67 | 3.67e-24 | 95.5 |
| MsG0380014132.01.T02 | MTR_4g082930 | 26.392 | 413 | 226 | 13 | 6 | 343 | 146 | 555 | 4.07e-23 | 102 |
| MsG0380014132.01.T02 | MTR_3g074970 | 24.819 | 415 | 220 | 13 | 17 | 380 | 143 | 516 | 1.00e-22 | 100 |
| MsG0380014132.01.T02 | MTR_5g092300 | 67.742 | 62 | 20 | 0 | 323 | 384 | 9 | 70 | 1.20e-22 | 91.3 |
| MsG0380014132.01.T02 | MTR_4g103520 | 25.135 | 370 | 222 | 10 | 60 | 380 | 176 | 539 | 1.76e-22 | 99.8 |
| MsG0380014132.01.T02 | MTR_4g103520 | 25.135 | 370 | 222 | 10 | 60 | 380 | 253 | 616 | 1.87e-22 | 99.8 |
| MsG0380014132.01.T02 | MTR_5g045600 | 24.747 | 396 | 239 | 12 | 35 | 380 | 222 | 608 | 1.12e-21 | 97.4 |
| MsG0380014132.01.T02 | MTR_8g063080 | 26.016 | 369 | 220 | 12 | 60 | 380 | 238 | 601 | 5.39e-21 | 95.5 |
| MsG0380014132.01.T02 | MTR_4g082940 | 30.469 | 256 | 131 | 8 | 131 | 343 | 290 | 541 | 3.25e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014132.01.T01 | AT3G20500 | 75.835 | 389 | 94 | 0 | 6 | 394 | 49 | 437 | 0.0 | 647 |
| MsG0380014132.01.T01 | AT3G52820 | 62.973 | 370 | 136 | 1 | 6 | 374 | 49 | 418 | 0.0 | 511 |
| MsG0380014132.01.T01 | AT3G52780 | 62.133 | 375 | 135 | 5 | 6 | 374 | 46 | 419 | 1.12e-169 | 481 |
| MsG0380014132.01.T01 | AT3G52810 | 58.684 | 380 | 156 | 1 | 6 | 384 | 53 | 432 | 4.16e-166 | 473 |
| MsG0380014132.01.T01 | AT3G52780 | 61.644 | 292 | 105 | 5 | 6 | 291 | 46 | 336 | 1.34e-127 | 372 |
| MsG0380014132.01.T01 | AT5G34850 | 42.857 | 392 | 197 | 7 | 6 | 371 | 56 | 446 | 1.07e-98 | 302 |
| MsG0380014132.01.T01 | AT3G07130 | 40.618 | 421 | 177 | 5 | 24 | 372 | 97 | 516 | 2.98e-95 | 295 |
| MsG0380014132.01.T01 | AT1G56360 | 41.709 | 398 | 199 | 10 | 6 | 371 | 52 | 448 | 2.04e-93 | 288 |
| MsG0380014132.01.T01 | AT4G36350 | 41.709 | 398 | 198 | 11 | 6 | 371 | 53 | 448 | 4.57e-93 | 287 |
| MsG0380014132.01.T01 | AT3G07130 | 37.665 | 454 | 177 | 6 | 24 | 372 | 97 | 549 | 2.39e-88 | 278 |
| MsG0380014132.01.T01 | AT2G27190 | 41.071 | 392 | 205 | 9 | 6 | 371 | 62 | 453 | 6.98e-88 | 274 |
| MsG0380014132.01.T01 | AT2G18130 | 40.921 | 391 | 189 | 11 | 6 | 371 | 56 | 429 | 7.18e-85 | 265 |
| MsG0380014132.01.T01 | AT2G16430 | 40.967 | 393 | 204 | 10 | 6 | 371 | 61 | 452 | 9.29e-85 | 266 |
| MsG0380014132.01.T01 | AT4G13700 | 41.645 | 377 | 165 | 7 | 6 | 329 | 67 | 441 | 2.13e-84 | 265 |
| MsG0380014132.01.T01 | AT2G16430 | 41.718 | 326 | 166 | 8 | 70 | 371 | 7 | 332 | 2.30e-74 | 235 |
| MsG0380014132.01.T01 | AT2G32770 | 34.557 | 463 | 203 | 11 | 5 | 369 | 72 | 532 | 2.95e-70 | 230 |
| MsG0380014132.01.T01 | AT4G13700 | 39.286 | 336 | 149 | 7 | 6 | 288 | 67 | 400 | 5.79e-65 | 213 |
| MsG0380014132.01.T01 | AT2G32770 | 35.422 | 367 | 161 | 6 | 54 | 345 | 62 | 427 | 1.77e-62 | 207 |
| MsG0380014132.01.T01 | AT3G46120 | 35.038 | 391 | 159 | 11 | 6 | 371 | 56 | 376 | 4.07e-60 | 199 |
| MsG0380014132.01.T01 | AT2G32770 | 30.837 | 454 | 185 | 12 | 5 | 360 | 72 | 494 | 2.26e-53 | 185 |
| MsG0380014132.01.T01 | AT1G52940 | 37.168 | 226 | 124 | 9 | 6 | 214 | 17 | 241 | 4.84e-33 | 124 |
| MsG0380014132.01.T01 | AT5G50400 | 25.946 | 370 | 219 | 13 | 60 | 380 | 165 | 528 | 8.10e-22 | 97.8 |
| MsG0380014132.01.T01 | AT1G13900 | 30.000 | 270 | 147 | 8 | 131 | 362 | 305 | 570 | 1.49e-21 | 97.1 |
| MsG0380014132.01.T01 | AT5G50400 | 25.946 | 370 | 219 | 13 | 60 | 380 | 237 | 600 | 1.52e-21 | 97.1 |
| MsG0380014132.01.T01 | AT4G24890 | 26.901 | 342 | 191 | 12 | 60 | 351 | 241 | 573 | 9.66e-21 | 94.7 |
| MsG0380014132.01.T01 | AT2G03450 | 29.927 | 274 | 143 | 10 | 131 | 362 | 304 | 570 | 1.04e-20 | 94.7 |
| MsG0380014132.01.T01 | AT1G13750 | 25.501 | 349 | 207 | 10 | 60 | 360 | 239 | 582 | 2.14e-20 | 93.6 |
| MsG0380014132.01.T02 | AT3G20500 | 75.835 | 389 | 94 | 0 | 6 | 394 | 49 | 437 | 0.0 | 647 |
| MsG0380014132.01.T02 | AT3G52820 | 62.973 | 370 | 136 | 1 | 6 | 374 | 49 | 418 | 0.0 | 511 |
| MsG0380014132.01.T02 | AT3G52780 | 62.133 | 375 | 135 | 5 | 6 | 374 | 46 | 419 | 1.12e-169 | 481 |
| MsG0380014132.01.T02 | AT3G52810 | 58.684 | 380 | 156 | 1 | 6 | 384 | 53 | 432 | 4.16e-166 | 473 |
| MsG0380014132.01.T02 | AT3G52780 | 61.644 | 292 | 105 | 5 | 6 | 291 | 46 | 336 | 1.34e-127 | 372 |
| MsG0380014132.01.T02 | AT5G34850 | 42.857 | 392 | 197 | 7 | 6 | 371 | 56 | 446 | 1.07e-98 | 302 |
| MsG0380014132.01.T02 | AT3G07130 | 40.618 | 421 | 177 | 5 | 24 | 372 | 97 | 516 | 2.98e-95 | 295 |
| MsG0380014132.01.T02 | AT1G56360 | 41.709 | 398 | 199 | 10 | 6 | 371 | 52 | 448 | 2.04e-93 | 288 |
| MsG0380014132.01.T02 | AT4G36350 | 41.709 | 398 | 198 | 11 | 6 | 371 | 53 | 448 | 4.57e-93 | 287 |
| MsG0380014132.01.T02 | AT3G07130 | 37.665 | 454 | 177 | 6 | 24 | 372 | 97 | 549 | 2.39e-88 | 278 |
| MsG0380014132.01.T02 | AT2G27190 | 41.071 | 392 | 205 | 9 | 6 | 371 | 62 | 453 | 6.98e-88 | 274 |
| MsG0380014132.01.T02 | AT2G18130 | 40.921 | 391 | 189 | 11 | 6 | 371 | 56 | 429 | 7.18e-85 | 265 |
| MsG0380014132.01.T02 | AT2G16430 | 40.967 | 393 | 204 | 10 | 6 | 371 | 61 | 452 | 9.29e-85 | 266 |
| MsG0380014132.01.T02 | AT4G13700 | 41.645 | 377 | 165 | 7 | 6 | 329 | 67 | 441 | 2.13e-84 | 265 |
| MsG0380014132.01.T02 | AT2G16430 | 41.718 | 326 | 166 | 8 | 70 | 371 | 7 | 332 | 2.30e-74 | 235 |
| MsG0380014132.01.T02 | AT2G32770 | 34.557 | 463 | 203 | 11 | 5 | 369 | 72 | 532 | 2.95e-70 | 230 |
| MsG0380014132.01.T02 | AT4G13700 | 39.286 | 336 | 149 | 7 | 6 | 288 | 67 | 400 | 5.79e-65 | 213 |
| MsG0380014132.01.T02 | AT2G32770 | 35.422 | 367 | 161 | 6 | 54 | 345 | 62 | 427 | 1.77e-62 | 207 |
| MsG0380014132.01.T02 | AT3G46120 | 35.038 | 391 | 159 | 11 | 6 | 371 | 56 | 376 | 4.07e-60 | 199 |
| MsG0380014132.01.T02 | AT2G32770 | 30.837 | 454 | 185 | 12 | 5 | 360 | 72 | 494 | 2.26e-53 | 185 |
| MsG0380014132.01.T02 | AT1G52940 | 37.168 | 226 | 124 | 9 | 6 | 214 | 17 | 241 | 4.84e-33 | 124 |
| MsG0380014132.01.T02 | AT5G50400 | 25.946 | 370 | 219 | 13 | 60 | 380 | 165 | 528 | 8.10e-22 | 97.8 |
| MsG0380014132.01.T02 | AT1G13900 | 30.000 | 270 | 147 | 8 | 131 | 362 | 305 | 570 | 1.49e-21 | 97.1 |
| MsG0380014132.01.T02 | AT5G50400 | 25.946 | 370 | 219 | 13 | 60 | 380 | 237 | 600 | 1.52e-21 | 97.1 |
| MsG0380014132.01.T02 | AT4G24890 | 26.901 | 342 | 191 | 12 | 60 | 351 | 241 | 573 | 9.66e-21 | 94.7 |
| MsG0380014132.01.T02 | AT2G03450 | 29.927 | 274 | 143 | 10 | 131 | 362 | 304 | 570 | 1.04e-20 | 94.7 |
| MsG0380014132.01.T02 | AT1G13750 | 25.501 | 349 | 207 | 10 | 60 | 360 | 239 | 582 | 2.14e-20 | 93.6 |
Find 25 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTACACTCTTGGAAATA+TGG | 0.197892 | 3:-50222888 | MsG0380014132.01.T02:three_prime_UTR |
| AGATATCTTACTTTGATATA+TGG | 0.257406 | 3:-50222970 | MsG0380014132.01.T01:three_prime_UTR |
| TAAACTCAACACATGCCTTC+TGG | 0.336522 | 3:-50223265 | MsG0380014132.01.T01:CDS |
| GTAGGTTGGCCTTCAGTCCT+TGG | 0.356973 | 3:-50223006 | MsG0380014132.01.T01:intron |
| GAATTCCGTGAAGCAAGTTT+TGG | 0.357920 | 3:-50223308 | MsG0380014132.01.T01:CDS |
| CAACGGATTAGCAAAGAGTT+TGG | 0.373259 | 3:-50223088 | MsG0380014132.01.T01:three_prime_UTR |
| CGGTAAAATCTGATGATATC+TGG | 0.374577 | 3:-50223214 | MsG0380014132.01.T01:CDS |
| TTGGTTGTCTCTTACACTCT+TGG | 0.377115 | 3:-50222896 | MsG0380014132.01.T02:three_prime_UTR |
| CCGGCTCATCATCGTCATTC+CGG | 0.394998 | 3:+50223234 | None:intergenic |
| CGGAATTCTGACCACTTTGG+CGG | 0.431727 | 3:+50223323 | None:intergenic |
| CATGACCAAAACTTGCTTCA+CGG | 0.454586 | 3:+50223303 | None:intergenic |
| AATTCTGACCACTTTGGCGG+TGG | 0.489479 | 3:+50223326 | None:intergenic |
| TTAACCTCTTTAGACAGCTC+AGG | 0.493926 | 3:-50223191 | MsG0380014132.01.T01:CDS |
| CAACACATGCCTTCTGGAGT+TGG | 0.510276 | 3:-50223259 | MsG0380014132.01.T01:CDS |
| TCACGGAATTCTGACCACTT+TGG | 0.520879 | 3:+50223320 | None:intergenic |
| AGCTGCTATATATTAATCTC+AGG | 0.531363 | 3:+50223032 | None:intergenic |
| ACATCCTGAGCTGTCTAAAG+AGG | 0.540208 | 3:+50223187 | None:intergenic |
| ATGCCTTCTGGAGTTGGCAC+CGG | 0.559442 | 3:-50223253 | MsG0380014132.01.T01:CDS |
| ATATAGCAGCTTGAGTAGGT+TGG | 0.575416 | 3:-50223020 | MsG0380014132.01.T01:intron |
| CCGGAATGACGATGATGAGC+CGG | 0.578815 | 3:-50223234 | MsG0380014132.01.T01:CDS |
| ATCTCAGCTTACTCACTCCA+AGG | 0.603673 | 3:+50222989 | None:intergenic |
| ATTCCGGTGCCAACTCCAGA+AGG | 0.606814 | 3:+50223250 | None:intergenic |
| TAATATATAGCAGCTTGAGT+AGG | 0.613595 | 3:-50223024 | MsG0380014132.01.T01:intron |
| TTACTCACTCCAAGGACTGA+AGG | 0.627827 | 3:+50222997 | None:intergenic |
| ATATAGATCCACCGCCAAAG+TGG | 0.638937 | 3:-50223334 | MsG0380014132.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATGTAACTAAAGT+TGG | - | Chr3:50226126-50226145 | MsG0380014132.01.T01:CDS | 15.0% |
| !! | ATCTTAATTTACACTTAAAA+AGG | + | Chr3:50225654-50225673 | None:intergenic | 15.0% |
| !! | TTGTGAAAAAAAGTAAATAT+AGG | + | Chr3:50226102-50226121 | None:intergenic | 15.0% |
| !!! | GTTTGTTTTAAATTTAATTC+TGG | - | Chr3:50225060-50225079 | MsG0380014132.01.T01:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | Chr3:50223786-50223805 | None:intergenic | 15.0% |
| !! | AAAGCAAAATATTGTTTAGT+AGG | + | Chr3:50224203-50224222 | None:intergenic | 20.0% |
| !! | AAATATTATGTGTGAACAAT+TGG | + | Chr3:50224005-50224024 | None:intergenic | 20.0% |
| !! | AGATATCTTACTTTGATATA+TGG | - | Chr3:50226071-50226090 | MsG0380014132.01.T01:CDS | 20.0% |
| !! | CTCTCAATAAATATGTATAA+GGG | + | Chr3:50224850-50224869 | None:intergenic | 20.0% |
| !! | GGGATGATAATTATTATAAA+CGG | + | Chr3:50225155-50225174 | None:intergenic | 20.0% |
| !! | TCTCTCAATAAATATGTATA+AGG | + | Chr3:50224851-50224870 | None:intergenic | 20.0% |
| ! | AAAAAAAGACTGTGTTGTAA+GGG | - | Chr3:50225083-50225102 | MsG0380014132.01.T01:intron | 25.0% |
| ! | AAAAGTTAGAACTTTCAGAA+AGG | + | Chr3:50224477-50224496 | None:intergenic | 25.0% |
| ! | AGAACAATATAAATGGCTAA+AGG | - | Chr3:50223543-50223562 | MsG0380014132.01.T01:CDS | 25.0% |
| ! | ATAAATCCATCCTTTAACAA+AGG | + | Chr3:50223394-50223413 | None:intergenic | 25.0% |
| ! | ATACATATTTATTGAGAGAG+AGG | - | Chr3:50224852-50224871 | MsG0380014132.01.T01:intron | 25.0% |
| ! | ATACATTCATATGAAAACCT+AGG | - | Chr3:50224560-50224579 | MsG0380014132.01.T01:intron | 25.0% |
| ! | CAAAATATTGTTTAGTAGGA+TGG | + | Chr3:50224199-50224218 | None:intergenic | 25.0% |
| ! | GATTTATATCCTATAATTCG+AGG | - | Chr3:50223407-50223426 | MsG0380014132.01.T01:intron | 25.0% |
| ! | GTTATAAATAACTGTGAATG+TGG | - | Chr3:50223910-50223929 | MsG0380014132.01.T01:intron | 25.0% |
| ! | TATACTATTCTTACCATGTT+TGG | - | Chr3:50225679-50225698 | MsG0380014132.01.T01:CDS | 25.0% |
| ! | TATTTATAACCTATGAAGCA+CGG | + | Chr3:50223900-50223919 | None:intergenic | 25.0% |
| ! | TCAATAAATATGTATAAGGG+AGG | + | Chr3:50224847-50224866 | None:intergenic | 25.0% |
| ! | TCAGATTGTATATAAGTGAA+AGG | - | Chr3:50224382-50224401 | MsG0380014132.01.T01:intron | 25.0% |
| ! | TCTAAATGTTTGTCATTCAT+TGG | + | Chr3:50224611-50224630 | None:intergenic | 25.0% |
| ! | TGTACTCAGAACAATATAAA+TGG | - | Chr3:50223536-50223555 | MsG0380014132.01.T01:CDS | 25.0% |
| ! | TTACACTTAAAAAGGAATAG+AGG | + | Chr3:50225646-50225665 | None:intergenic | 25.0% |
| !! | ACGTGTATATAATGGAAAAT+TGG | - | Chr3:50225480-50225499 | MsG0380014132.01.T01:intron | 25.0% |
| !! | AGAGAAGATCAAGAAATTTT+AGG | + | Chr3:50225923-50225942 | None:intergenic | 25.0% |
| !! | ATATTTTGCTTTAGCAGTTT+TGG | - | Chr3:50224211-50224230 | MsG0380014132.01.T01:intron | 25.0% |
| !! | GAGAAGATCAAGAAATTTTA+GGG | + | Chr3:50225922-50225941 | None:intergenic | 25.0% |
| !! | TATTTTGCTTTAGCAGTTTT+GGG | - | Chr3:50224212-50224231 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | AACTCTGAAGTTATTATAGT+AGG | - | Chr3:50224885-50224904 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | AACTTTTCTGTTTCTCATTA+GGG | - | Chr3:50224490-50224509 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | TAACTTTTCTGTTTCTCATT+AGG | - | Chr3:50224489-50224508 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | TATTATTCTTTTGAAGTTGC+TGG | - | Chr3:50223472-50223491 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | TCTGTTTCTACTAAACTTTT+AGG | - | Chr3:50224128-50224147 | MsG0380014132.01.T01:intron | 25.0% |
| !!! | TTTTTTCACTTCTTGTTGTA+AGG | + | Chr3:50223947-50223966 | None:intergenic | 25.0% |
| ACTAGAAACAGTTGCATTTA+TGG | + | Chr3:50224039-50224058 | None:intergenic | 30.0% | |
| AGAGCATATACCTTTGTTAA+AGG | - | Chr3:50223381-50223400 | MsG0380014132.01.T01:intron | 30.0% | |
| AGATCACAACGAAGATATAA+AGG | + | Chr3:50225176-50225195 | None:intergenic | 30.0% | |
| AGCTGCTATATATTAATCTC+AGG | + | Chr3:50226012-50226031 | None:intergenic | 30.0% | |
| ATAAATGGCTAAAGGTTAGT+TGG | - | Chr3:50223551-50223570 | MsG0380014132.01.T01:CDS | 30.0% | |
| ATCTATATACCTACCAAACA+TGG | + | Chr3:50225695-50225714 | None:intergenic | 30.0% | |
| ATGCATGCATATCTTTATGA+AGG | + | Chr3:50224764-50224783 | None:intergenic | 30.0% | |
| ATTGGTTACAATGCAAGTAA+TGG | + | Chr3:50224593-50224612 | None:intergenic | 30.0% | |
| CAAAAGAAAAATGAACAGAC+GGG | + | Chr3:50224940-50224959 | None:intergenic | 30.0% | |
| CATATACCTTTGTTAAAGGA+TGG | - | Chr3:50223385-50223404 | MsG0380014132.01.T01:intron | 30.0% | |
| CGGTAAAAGTAAACAGAATT+CGG | + | Chr3:50223094-50223113 | None:intergenic | 30.0% | |
| GAAAAAAAGACTGTGTTGTA+AGG | - | Chr3:50225082-50225101 | MsG0380014132.01.T01:intron | 30.0% | |
| GATCACAACGAAGATATAAA+GGG | + | Chr3:50225175-50225194 | None:intergenic | 30.0% | |
| GCAAAAGAAAAATGAACAGA+CGG | + | Chr3:50224941-50224960 | None:intergenic | 30.0% | |
| GTAGAAAATGTAACTGTAAG+AGG | + | Chr3:50223029-50223048 | None:intergenic | 30.0% | |
| TAATATATAGCAGCTTGAGT+AGG | - | Chr3:50226017-50226036 | MsG0380014132.01.T01:CDS | 30.0% | |
| TATTATGTGTGAACAATTGG+AGG | + | Chr3:50224002-50224021 | None:intergenic | 30.0% | |
| TCTCAAATTATTATCGGTGT+CGG | + | Chr3:50223780-50223799 | None:intergenic | 30.0% | |
| TGACAGAAACGTGTATATAA+TGG | - | Chr3:50225472-50225491 | MsG0380014132.01.T01:intron | 30.0% | |
| TTACATGATATTCACCAAAC+TGG | - | Chr3:50223694-50223713 | MsG0380014132.01.T01:CDS | 30.0% | |
| TTATATCCTATAATTCGAGG+TGG | - | Chr3:50223410-50223429 | MsG0380014132.01.T01:intron | 30.0% | |
| TTCATAGTTTATAGCCAGTT+TGG | + | Chr3:50223711-50223730 | None:intergenic | 30.0% | |
| TTGCACTTCATCATTATCAA+GGG | + | Chr3:50224670-50224689 | None:intergenic | 30.0% | |
| TTGGTTACAATGCAAGTAAT+GGG | + | Chr3:50224592-50224611 | None:intergenic | 30.0% | |
| TTGTTCTATGCTAACTACTA+TGG | + | Chr3:50224358-50224377 | None:intergenic | 30.0% | |
| TTTCCAATTAAAGTATGTCG+TGG | - | Chr3:50223645-50223664 | MsG0380014132.01.T01:intron | 30.0% | |
| TTTGCACTTCATCATTATCA+AGG | + | Chr3:50224671-50224690 | None:intergenic | 30.0% | |
| ! | CAGATATCATCAGATTTTAC+CGG | + | Chr3:50225829-50225848 | None:intergenic | 30.0% |
| ! | CTTCTCTATTTTCTCAACAA+CGG | - | Chr3:50225936-50225955 | MsG0380014132.01.T01:CDS | 30.0% |
| ! | GAATTAGTTGGAGATTAGTT+TGG | - | Chr3:50224284-50224303 | MsG0380014132.01.T01:intron | 30.0% |
| ! | GATGTGATCTAATGTTGATT+TGG | + | Chr3:50223215-50223234 | None:intergenic | 30.0% |
| ! | TCAACAAGAACTACTAGTTT+CGG | + | Chr3:50225121-50225140 | None:intergenic | 30.0% |
| !!! | GGCTTCTATTTTTATGTATG+TGG | + | Chr3:50224743-50224762 | None:intergenic | 30.0% |
| !!! | TTTAGCAGTTTTGGGATTAT+TGG | - | Chr3:50224220-50224239 | MsG0380014132.01.T01:intron | 30.0% |
| AAACTAATTGGGAATTGAGC+TGG | + | Chr3:50223157-50223176 | None:intergenic | 35.0% | |
| AAGATACACCATACGGTAAT+AGG | - | Chr3:50223058-50223077 | MsG0380014132.01.T01:three_prime_UTR | 35.0% | |
| AATAGTAACACAGCTCATCA+AGG | - | Chr3:50225269-50225288 | MsG0380014132.01.T01:intron | 35.0% | |
| AATCCAGGTACACATTTCTT+TGG | - | Chr3:50222889-50222908 | MsG0380014132.01.T02:three_prime_UTR | 35.0% | |
| AATGGAAAATTGGATCCTTG+TGG | - | Chr3:50225490-50225509 | MsG0380014132.01.T01:intron | 35.0% | |
| ACATTCCAGACAAATCGAAT+GGG | - | Chr3:50223598-50223617 | MsG0380014132.01.T01:intron | 35.0% | |
| ATGATGAAGTGCAAAATCCT+TGG | - | Chr3:50224676-50224695 | MsG0380014132.01.T01:intron | 35.0% | |
| CACACAACAACTGAATTAGT+TGG | - | Chr3:50224272-50224291 | MsG0380014132.01.T01:intron | 35.0% | |
| CATTGCATTTACATATGGCT+AGG | - | Chr3:50224712-50224731 | MsG0380014132.01.T01:intron | 35.0% | |
| CGGTAAAATCTGATGATATC+TGG | - | Chr3:50225827-50225846 | MsG0380014132.01.T01:CDS | 35.0% | |
| CTATAACACGAAACATCACA+AGG | + | Chr3:50224099-50224118 | None:intergenic | 35.0% | |
| CTATTCTTACCATGTTTGGT+AGG | - | Chr3:50225683-50225702 | MsG0380014132.01.T01:CDS | 35.0% | |
| CTCTTACACTCTTGGAAATA+TGG | - | Chr3:50226153-50226172 | MsG0380014132.01.T01:CDS | 35.0% | |
| CTTGTGATGTTTCGTGTTAT+AGG | - | Chr3:50224097-50224116 | MsG0380014132.01.T01:intron | 35.0% | |
| GCATGCATTGCATTTACATA+TGG | - | Chr3:50224707-50224726 | MsG0380014132.01.T01:intron | 35.0% | |
| GTTCATGTAACAATTGGTGA+TGG | - | Chr3:50225517-50225536 | MsG0380014132.01.T01:CDS | 35.0% | |
| GTTCCATATTCTACAACTGA+AGG | + | Chr3:50222965-50222984 | None:intergenic | 35.0% | |
| TACATTCCAGACAAATCGAA+TGG | - | Chr3:50223597-50223616 | MsG0380014132.01.T01:intron | 35.0% | |
| TAGAATATGGAACATTGCCA+GGG | - | Chr3:50222972-50222991 | MsG0380014132.01.T01:three_prime_UTR | 35.0% | |
| TAGCCACGACATACTTTAAT+TGG | + | Chr3:50223651-50223670 | None:intergenic | 35.0% | |
| TAGTATCCGAGAAAACAGAA+CGG | + | Chr3:50225623-50225642 | None:intergenic | 35.0% | |
| TGAAATATGACAAGCAACCA+AGG | + | Chr3:50225236-50225255 | None:intergenic | 35.0% | |
| TGGTGATATGATGAAAACCA+TGG | - | Chr3:50225298-50225317 | MsG0380014132.01.T01:intron | 35.0% | |
| TGGTTACAATGCAAGTAATG+GGG | + | Chr3:50224591-50224610 | None:intergenic | 35.0% | |
| TTGTCATATTTCATGTGCCA+TGG | - | Chr3:50225243-50225262 | MsG0380014132.01.T01:intron | 35.0% | |
| ! | AAAATGCCATTTGAGGAAAG+TGG | - | Chr3:50223433-50223452 | MsG0380014132.01.T01:intron | 35.0% |
| ! | AAAGAAGCAACGGTTATTTC+TGG | + | Chr3:50224644-50224663 | None:intergenic | 35.0% |
| ! | AGTTACATTTTCTACAGCTC+AGG | - | Chr3:50223034-50223053 | MsG0380014132.01.T01:three_prime_UTR | 35.0% |
| ! | ATTCAACCGTTCTGTTTTCT+CGG | - | Chr3:50225614-50225633 | MsG0380014132.01.T01:CDS | 35.0% |
| ! | CATTTTCCACCTCGAATTAT+AGG | + | Chr3:50223419-50223438 | None:intergenic | 35.0% |
| ! | GCTGTGTTACTATTATACCA+TGG | + | Chr3:50225263-50225282 | None:intergenic | 35.0% |
| ! | TAAACAGAATTCGGCTCTAA+AGG | + | Chr3:50223085-50223104 | None:intergenic | 35.0% |
| !! | ATGTAACAATTGGTGATGGA+GGG | - | Chr3:50225521-50225540 | MsG0380014132.01.T01:CDS | 35.0% |
| !! | TCTGTTTACTTTTACCGATG+CGG | - | Chr3:50223097-50223116 | MsG0380014132.01.T01:three_prime_UTR | 35.0% |
| !!! | ATTCCCAATTAGTTTTGCTG+TGG | - | Chr3:50223162-50223181 | MsG0380014132.01.T01:CDS | 35.0% |
| AACAGTTGCATTTATGGCAG+TGG | + | Chr3:50224033-50224052 | None:intergenic | 40.0% | |
| ACGAAACATCACAAGGTTCA+TGG | + | Chr3:50224092-50224111 | None:intergenic | 40.0% | |
| AGATTTGTCATCAGTAACCC+AGG | + | Chr3:50222939-50222958 | None:intergenic | 40.0% | |
| ATATAGCAGCTTGAGTAGGT+TGG | - | Chr3:50226021-50226040 | MsG0380014132.01.T01:CDS | 40.0% | |
| CCAACGATGCTGTATATAGT+CGG | + | Chr3:50223287-50223306 | None:intergenic | 40.0% | |
| CGACCACAGCAAAACTAATT+GGG | + | Chr3:50223168-50223187 | None:intergenic | 40.0% | |
| CGACTATATACAGCATCGTT+GGG | - | Chr3:50223285-50223304 | MsG0380014132.01.T01:CDS | 40.0% | |
| CTAAAGGACCTATTACCGTA+TGG | + | Chr3:50223069-50223088 | None:intergenic | 40.0% | |
| CTCAGGAAAGATACACCATA+CGG | - | Chr3:50223051-50223070 | MsG0380014132.01.T01:three_prime_UTR | 40.0% | |
| CTTGATCCACTTTCCTCAAA+TGG | + | Chr3:50223442-50223461 | None:intergenic | 40.0% | |
| GCACCTTCAGTTGTAGAATA+TGG | - | Chr3:50222959-50222978 | MsG0380014132.01.T01:three_prime_UTR | 40.0% | |
| GGTTAACATCGTATCTGCAT+TGG | + | Chr3:50223240-50223259 | None:intergenic | 40.0% | |
| GGTTACAATGCAAGTAATGG+GGG | + | Chr3:50224590-50224609 | None:intergenic | 40.0% | |
| GTAGAATATGGAACATTGCC+AGG | - | Chr3:50222971-50222990 | MsG0380014132.01.T01:three_prime_UTR | 40.0% | |
| GTATATAGTCGGCATACGAA+AGG | + | Chr3:50223276-50223295 | None:intergenic | 40.0% | |
| TAAACTCAACACATGCCTTC+TGG | - | Chr3:50225776-50225795 | MsG0380014132.01.T01:CDS | 40.0% | |
| TACGATGTTAACCTGATTCC+TGG | - | Chr3:50223247-50223266 | MsG0380014132.01.T01:CDS | 40.0% | |
| TCAAGGGAAGAAAGAAGCAA+CGG | + | Chr3:50224654-50224673 | None:intergenic | 40.0% | |
| TCTACAGATGGATCTGTCAA+AGG | - | Chr3:50225193-50225212 | MsG0380014132.01.T01:intron | 40.0% | |
| TCTTCGTTGTGATCTACAGA+TGG | - | Chr3:50225181-50225200 | MsG0380014132.01.T01:intron | 40.0% | |
| TTAACCTCTTTAGACAGCTC+AGG | - | Chr3:50225850-50225869 | MsG0380014132.01.T01:CDS | 40.0% | |
| TTGGTTGTCTCTTACACTCT+TGG | - | Chr3:50226145-50226164 | MsG0380014132.01.T01:CDS | 40.0% | |
| ! | CATGACCAAAACTTGCTTCA+CGG | + | Chr3:50225741-50225760 | None:intergenic | 40.0% |
| ! | GAATTCCGTGAAGCAAGTTT+TGG | - | Chr3:50225733-50225752 | MsG0380014132.01.T01:CDS | 40.0% |
| ! | TAAAGCCCATTCGATTTGTC+TGG | + | Chr3:50223606-50223625 | None:intergenic | 40.0% |
| !! | ATTGGAGGCATCAAGAAAAC+AGG | + | Chr3:50223987-50224006 | None:intergenic | 40.0% |
| !! | CAACGGATTAGCAAAGAGTT+TGG | - | Chr3:50225953-50225972 | MsG0380014132.01.T01:CDS | 40.0% |
| !! | CATGTAACAATTGGTGATGG+AGG | - | Chr3:50225520-50225539 | MsG0380014132.01.T01:CDS | 40.0% |
| !! | GGTGCTGTTCATGTAACAAT+TGG | - | Chr3:50225511-50225530 | MsG0380014132.01.T01:CDS | 40.0% |
| !! | TTGATTTGGTCCAACCAGTT+TGG | + | Chr3:50223201-50223220 | None:intergenic | 40.0% |
| !!! | AGCGTCGATTTAGTTTTTGC+AGG | - | Chr3:50225341-50225360 | MsG0380014132.01.T01:intron | 40.0% |
| !!! | CCAATTAGTTTTGCTGTGGT+CGG | - | Chr3:50223166-50223185 | MsG0380014132.01.T01:CDS | 40.0% |
| AACACAGCTCATCAAGGTGA+AGG | - | Chr3:50225275-50225294 | MsG0380014132.01.T01:intron | 45.0% | |
| AATGCATGCATCTCTCACCA+AGG | + | Chr3:50224696-50224715 | None:intergenic | 45.0% | |
| ACAGATGGATCTGTCAAAGG+TGG | - | Chr3:50225196-50225215 | MsG0380014132.01.T01:intron | 45.0% | |
| ACATCCTGAGCTGTCTAAAG+AGG | + | Chr3:50225857-50225876 | None:intergenic | 45.0% | |
| ACGCTAGCAGCATAAAGCAA+TGG | + | Chr3:50225326-50225345 | None:intergenic | 45.0% | |
| AGACCATGGATGGTAACACA+AGG | - | Chr3:50223346-50223365 | MsG0380014132.01.T01:intron | 45.0% | |
| AGCATAAAGCAATGGCTCCA+TGG | + | Chr3:50225318-50225337 | None:intergenic | 45.0% | |
| ATATAGATCCACCGCCAAAG+TGG | - | Chr3:50225707-50225726 | MsG0380014132.01.T01:CDS | 45.0% | |
| ATCTCAGCTTACTCACTCCA+AGG | + | Chr3:50226055-50226074 | None:intergenic | 45.0% | |
| CAGGTACACATTTCTTTGGC+AGG | - | Chr3:50222893-50222912 | MsG0380014132.01.T02:three_prime_UTR | 45.0% | |
| CCGACCACAGCAAAACTAAT+TGG | + | Chr3:50223169-50223188 | None:intergenic | 45.0% | |
| CCGACTATATACAGCATCGT+TGG | - | Chr3:50223284-50223303 | MsG0380014132.01.T01:CDS | 45.0% | |
| CTAATTGGGAATTGAGCTGG+TGG | + | Chr3:50223154-50223173 | None:intergenic | 45.0% | |
| CTGCCAAAGAAATGTGTACC+TGG | + | Chr3:50222895-50222914 | None:intergenic | 45.0% | |
| GACCATGGATGGTAACACAA+GGG | - | Chr3:50223347-50223366 | MsG0380014132.01.T01:intron | 45.0% | |
| GATAATTCCGTAAAGCAGCG+CGG | + | Chr3:50224526-50224545 | None:intergenic | 45.0% | |
| GGTGCTCACATTATCATGCT+TGG | - | Chr3:50223493-50223512 | MsG0380014132.01.T01:intron | 45.0% | |
| GTTACATGAACAGCACCACA+AGG | + | Chr3:50225508-50225527 | None:intergenic | 45.0% | |
| TATGAACACCGACAGAGACA+TGG | - | Chr3:50223725-50223744 | MsG0380014132.01.T01:CDS | 45.0% | |
| TCACGGAATTCTGACCACTT+TGG | + | Chr3:50225724-50225743 | None:intergenic | 45.0% | |
| TGGAGGGAACAAAGAAGGAT+TGG | - | Chr3:50225537-50225556 | MsG0380014132.01.T01:CDS | 45.0% | |
| TGTCAAAGGTGGACAGGAAA+AGG | - | Chr3:50225207-50225226 | MsG0380014132.01.T01:intron | 45.0% | |
| TTACTCACTCCAAGGACTGA+AGG | + | Chr3:50226047-50226066 | None:intergenic | 45.0% | |
| TTCCCTTGTGTTACCATCCA+TGG | + | Chr3:50223352-50223371 | None:intergenic | 45.0% | |
| TTCCTCGATTAGGTGTATCC+CGG | + | Chr3:50223874-50223893 | None:intergenic | 45.0% | |
| ! | ATTGCCAGGGAAGTATGACT+CGG | - | Chr3:50222985-50223004 | MsG0380014132.01.T01:intron | 45.0% |
| ! | CATGGTCTAGAACTAGCAAG+TGG | + | Chr3:50223334-50223353 | None:intergenic | 45.0% |
| ! | GAGGTGGAAAATGCCATTTG+AGG | - | Chr3:50223426-50223445 | MsG0380014132.01.T01:intron | 45.0% |
| !! | AAGTATGACTCGGTAGCTGA+AGG | - | Chr3:50222995-50223014 | MsG0380014132.01.T01:intron | 45.0% |
| !! | CACTTGCTAGTTCTAGACCA+TGG | - | Chr3:50223332-50223351 | MsG0380014132.01.T01:CDS | 45.0% |
| !! | CGTGAAGCAAGTTTTGGTCA+TGG | - | Chr3:50225739-50225758 | MsG0380014132.01.T01:CDS | 45.0% |
| !! | GTTTACTTTTACCGATGCGG+TGG | - | Chr3:50223100-50223119 | MsG0380014132.01.T01:three_prime_UTR | 45.0% |
| !! | TGCTAGTTCTAGACCATGGA+TGG | - | Chr3:50223336-50223355 | MsG0380014132.01.T01:CDS | 45.0% |
| AATTCTGACCACTTTGGCGG+TGG | + | Chr3:50225718-50225737 | None:intergenic | 50.0% | |
| ACAAGCACGTGAGAATCACC+TGG | - | Chr3:50222918-50222937 | MsG0380014132.01.T02:three_prime_UTR | 50.0% | |
| ACAGCTCATCAAGGTGAAGG+TGG | - | Chr3:50225278-50225297 | MsG0380014132.01.T01:intron | 50.0% | |
| ACCGACAGAGACATGGACAT+CGG | - | Chr3:50223732-50223751 | MsG0380014132.01.T01:CDS | 50.0% | |
| AGCACGGACATTCCTCGATT+AGG | + | Chr3:50223884-50223903 | None:intergenic | 50.0% | |
| ATACCGAGCGTTCATATGCG+TGG | + | Chr3:50225373-50225392 | None:intergenic | 50.0% | |
| ATCGTTGGGACACGTTTGGT+AGG | - | Chr3:50223299-50223318 | MsG0380014132.01.T01:CDS | 50.0% | |
| CAAGCACGTGAGAATCACCT+GGG | - | Chr3:50222919-50222938 | MsG0380014132.01.T02:three_prime_UTR | 50.0% | |
| CGGAATTCTGACCACTTTGG+CGG | + | Chr3:50225721-50225740 | None:intergenic | 50.0% | |
| GAACGCTCGGTATGCTAATG+TGG | - | Chr3:50225380-50225399 | MsG0380014132.01.T01:intron | 50.0% | |
| GAGATCTTGGCCAAACTGGT+TGG | - | Chr3:50223188-50223207 | MsG0380014132.01.T01:CDS | 50.0% | |
| GAGGAATGTCCGTGCTTCAT+AGG | - | Chr3:50223888-50223907 | MsG0380014132.01.T01:intron | 50.0% | |
| GATTAGGTGTATCCCGGTGT+CGG | + | Chr3:50223868-50223887 | None:intergenic | 50.0% | |
| TGGACAGGAAAAGGACACCT+TGG | - | Chr3:50225216-50225235 | MsG0380014132.01.T01:intron | 50.0% | |
| TGGATCTGTCAAAGGTGGAC+AGG | - | Chr3:50225201-50225220 | MsG0380014132.01.T01:intron | 50.0% | |
| TGTCCACGCATATGAACGCT+CGG | - | Chr3:50225367-50225386 | MsG0380014132.01.T01:intron | 50.0% | |
| ! | CAAGTAATGGGGGTAGTCCT+AGG | + | Chr3:50224580-50224599 | None:intergenic | 50.0% |
| ! | TTTGCTGTGGTCGGAGATCT+TGG | - | Chr3:50223175-50223194 | MsG0380014132.01.T01:CDS | 50.0% |
| ! | TTTTACCGATGCGGTGGACA+AGG | - | Chr3:50223106-50223125 | MsG0380014132.01.T01:three_prime_UTR | 50.0% |
| !! | CAACACATGCCTTCTGGAGT+TGG | - | Chr3:50225782-50225801 | MsG0380014132.01.T01:CDS | 50.0% |
| !! | GGTGATGGAGGGAACAAAGA+AGG | - | Chr3:50225532-50225551 | MsG0380014132.01.T01:CDS | 50.0% |
| !! | TATTATCGGTGTCGGCGTGT+CGG | + | Chr3:50223772-50223791 | None:intergenic | 50.0% |
| ACGAAAGGTCGCCAGGAATC+AGG | + | Chr3:50223261-50223280 | None:intergenic | 55.0% | |
| CACCGGGATACACCTAATCG+AGG | - | Chr3:50223869-50223888 | MsG0380014132.01.T01:intron | 55.0% | |
| CAGCATCGTTGGGACACGTT+TGG | - | Chr3:50223295-50223314 | MsG0380014132.01.T01:CDS | 55.0% | |
| CCCGATGTCCATGTCTCTGT+CGG | + | Chr3:50223736-50223755 | None:intergenic | 55.0% | |
| CCGACAGAGACATGGACATC+GGG | - | Chr3:50223733-50223752 | MsG0380014132.01.T01:CDS | 55.0% | |
| CCGGAATGACGATGATGAGC+CGG | - | Chr3:50225807-50225826 | MsG0380014132.01.T01:CDS | 55.0% | |
| CCGGCTCATCATCGTCATTC+CGG | + | Chr3:50225810-50225829 | None:intergenic | 55.0% | |
| GCTACCGAGTCATACTTCCC+TGG | + | Chr3:50222992-50223011 | None:intergenic | 55.0% | |
| GTCGGAGATCTTGGCCAAAC+TGG | - | Chr3:50223184-50223203 | MsG0380014132.01.T01:CDS | 55.0% | |
| ! | ATTCCGGTGCCAACTCCAGA+AGG | + | Chr3:50225794-50225813 | None:intergenic | 55.0% |
| !! | ATGCCTTCTGGAGTTGGCAC+CGG | - | Chr3:50225788-50225807 | MsG0380014132.01.T01:CDS | 55.0% |
| !! | GAGCTGGTGGTGTTTTGAGC+TGG | + | Chr3:50223141-50223160 | None:intergenic | 55.0% |
| !! | GGTGTTTTGAGCTGGAGCTC+AGG | + | Chr3:50223133-50223152 | None:intergenic | 55.0% |
| !! | GTAGGTTGGCCTTCAGTCCT+TGG | - | Chr3:50226035-50226054 | MsG0380014132.01.T01:CDS | 55.0% |
| ACTGATGCGTGTCCGACACC+GGG | - | Chr3:50223853-50223872 | MsG0380014132.01.T01:intron | 60.0% | |
| CACTGATGCGTGTCCGACAC+CGG | - | Chr3:50223852-50223871 | MsG0380014132.01.T01:intron | 60.0% | |
| CAGGACCTTGTCCACCGCAT+CGG | + | Chr3:50223114-50223133 | None:intergenic | 60.0% | |
| CATGGACATCGGGCACGACA+CGG | - | Chr3:50223743-50223762 | MsG0380014132.01.T01:CDS | 60.0% | |
| TCGGCATACGAAAGGTCGCC+AGG | + | Chr3:50223268-50223287 | None:intergenic | 60.0% | |
| ! | ACGCACTCCGCGCTGCTTTA+CGG | - | Chr3:50224516-50224535 | MsG0380014132.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 50222878 | 50226185 | 50222878 | ID=MsG0380014132.01;Name=MsG0380014132.01 |
| Chr3 | mRNA | 50222951 | 50226185 | 50222951 | ID=MsG0380014132.01.T01;Parent=MsG0380014132.01;Name=MsG0380014132.01.T01;_AED=0.48;_eAED=0.48;_QI=0|1|0.8|1|0.75|0.6|5|163|394 |
| Chr3 | exon | 50222951 | 50223003 | 50222951 | ID=MsG0380014132.01.T01:exon:9634;Parent=MsG0380014132.01.T01 |
| Chr3 | exon | 50223029 | 50223358 | 50223029 | ID=MsG0380014132.01.T01:exon:9633;Parent=MsG0380014132.01.T01 |
| Chr3 | CDS | 50225499 | 50226185 | 50225499 | ID=MsG0380014132.01.T01:cds;Parent=MsG0380014132.01.T01 |
| Chr3 | CDS | 50223675 | 50223863 | 50223675 | ID=MsG0380014132.01.T01:cds;Parent=MsG0380014132.01.T01 |
| Chr3 | CDS | 50223497 | 50223585 | 50223497 | ID=MsG0380014132.01.T01:cds;Parent=MsG0380014132.01.T01 |
| Chr3 | CDS | 50223139 | 50223358 | 50223139 | ID=MsG0380014132.01.T01:cds;Parent=MsG0380014132.01.T01 |
| Chr3 | three_prime_UTR | 50223029 | 50223138 | 50223029 | ID=MsG0380014132.01.T01:three_prime_utr;Parent=MsG0380014132.01.T01 |
| Chr3 | three_prime_UTR | 50222951 | 50223003 | 50222951 | ID=MsG0380014132.01.T01:three_prime_utr;Parent=MsG0380014132.01.T01 |
| Chr3 | mRNA | 50222878 | 50226185 | 50222878 | ID=MsG0380014132.01.T02;Parent=MsG0380014132.01;Name=MsG0380014132.01.T02;_AED=0.47;_eAED=0.48;_QI=0|1|0.75|1|1|1|4|261|394 |
| Chr3 | exon | 50222878 | 50223358 | 50222878 | ID=MsG0380014132.01.T02:exon:9635;Parent=MsG0380014132.01.T02 |
| Chr3 | CDS | 50225499 | 50226185 | 50225499 | ID=MsG0380014132.01.T02:cds;Parent=MsG0380014132.01.T02 |
| Chr3 | CDS | 50223675 | 50223863 | 50223675 | ID=MsG0380014132.01.T02:cds;Parent=MsG0380014132.01.T02 |
| Chr3 | CDS | 50223497 | 50223585 | 50223497 | ID=MsG0380014132.01.T02:cds;Parent=MsG0380014132.01.T02 |
| Chr3 | CDS | 50223139 | 50223358 | 50223139 | ID=MsG0380014132.01.T02:cds;Parent=MsG0380014132.01.T02 |
| Chr3 | three_prime_UTR | 50222878 | 50223138 | 50222878 | ID=MsG0380014132.01.T02:three_prime_utr;Parent=MsG0380014132.01.T02 |
| Gene Sequence |
| Protein sequence |
