Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028246.01.T01 | XP_003615284.1 | 96.866 | 351 | 9 | 1 | 1 | 351 | 2 | 350 | 0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028246.01.T01 | Q17438 | 49.296 | 71 | 35 | 1 | 59 | 129 | 130 | 199 | 2.00E-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028246.01.T01 | G7KBK7 | 96.866 | 351 | 9 | 1 | 1 | 351 | 2 | 350 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480020506.01 | MsG0580028246.01 | 0.830502 | 2.832298e-55 | 2.989454e-52 |
| MsG0480021300.01 | MsG0580028246.01 | 0.827934 | 1.188933e-54 | 1.164496e-51 |
| MsG0480021977.01 | MsG0580028246.01 | 0.840164 | 1.025602e-57 | 1.448650e-54 |
| MsG0580028246.01 | MsG0780039803.01 | 0.820003 | 8.626334e-53 | 6.743990e-50 |
| MsG0580028246.01 | MsG0780040323.01 | 0.809060 | 2.280291e-50 | 1.325359e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028246.01.T01 | MTR_5g066100 | 96.866 | 351 | 9 | 1 | 1 | 351 | 2 | 350 | 0.0 | 701 |
| MsG0580028246.01.T01 | MTR_3g100330 | 56.863 | 255 | 62 | 4 | 1 | 252 | 1 | 210 | 1.12e-93 | 279 |
| MsG0580028246.01.T01 | MTR_4g093930 | 41.007 | 278 | 130 | 5 | 3 | 250 | 4 | 277 | 2.20e-58 | 196 |
| MsG0580028246.01.T01 | MTR_2g009520 | 48.485 | 132 | 68 | 0 | 3 | 134 | 4 | 135 | 2.47e-36 | 138 |
| MsG0580028246.01.T01 | MTR_2g009520 | 42.857 | 70 | 32 | 2 | 187 | 250 | 243 | 310 | 5.38e-12 | 67.4 |
| MsG0580028246.01.T01 | MTR_6g059870 | 34.599 | 237 | 137 | 6 | 1 | 231 | 1 | 225 | 1.58e-35 | 137 |
| MsG0580028246.01.T01 | MTR_4g118660 | 33.091 | 275 | 159 | 9 | 1 | 264 | 42 | 302 | 6.42e-33 | 130 |
| MsG0580028246.01.T01 | MTR_3g091040 | 33.613 | 238 | 141 | 6 | 1 | 231 | 1 | 228 | 4.65e-31 | 124 |
| MsG0580028246.01.T01 | MTR_2g020420 | 34.167 | 240 | 146 | 5 | 1 | 231 | 1 | 237 | 1.11e-30 | 123 |
| MsG0580028246.01.T01 | MTR_8g068845 | 34.123 | 211 | 85 | 7 | 45 | 250 | 47 | 208 | 1.14e-30 | 117 |
| MsG0580028246.01.T01 | MTR_2g020420 | 34.167 | 240 | 146 | 5 | 1 | 231 | 1 | 237 | 1.23e-30 | 123 |
| MsG0580028246.01.T01 | MTR_5g097170 | 33.065 | 248 | 117 | 6 | 1 | 236 | 1 | 211 | 5.82e-29 | 118 |
| MsG0580028246.01.T01 | MTR_7g114150 | 32.159 | 227 | 131 | 7 | 1 | 226 | 1 | 205 | 1.41e-25 | 108 |
| MsG0580028246.01.T01 | MTR_3g082810 | 33.178 | 214 | 108 | 5 | 1 | 214 | 1 | 179 | 6.75e-25 | 106 |
| MsG0580028246.01.T01 | MTR_3g099170 | 28.727 | 275 | 146 | 7 | 1 | 228 | 15 | 286 | 8.91e-24 | 103 |
| MsG0580028246.01.T01 | MTR_8g011080 | 30.483 | 269 | 136 | 9 | 1 | 264 | 54 | 276 | 1.35e-23 | 102 |
| MsG0580028246.01.T01 | MTR_1g060440 | 30.000 | 230 | 134 | 6 | 1 | 229 | 1 | 204 | 6.78e-21 | 94.4 |
| MsG0580028246.01.T01 | MTR_1g081970 | 28.682 | 258 | 146 | 7 | 1 | 237 | 1 | 241 | 1.59e-20 | 93.2 |
| MsG0580028246.01.T01 | MTR_1g081960 | 27.948 | 229 | 132 | 6 | 1 | 221 | 51 | 254 | 1.11e-17 | 82.8 |
| MsG0580028246.01.T01 | MTR_5g032370 | 30.325 | 277 | 122 | 11 | 8 | 276 | 9 | 222 | 2.73e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028246.01.T01 | AT2G01710 | 45.810 | 358 | 126 | 9 | 2 | 348 | 5 | 305 | 1.39e-97 | 292 |
| MsG0580028246.01.T01 | AT2G01710 | 45.810 | 358 | 126 | 9 | 2 | 348 | 49 | 349 | 5.21e-97 | 292 |
| MsG0580028246.01.T01 | AT5G64360 | 35.457 | 361 | 181 | 12 | 7 | 336 | 17 | 356 | 8.08e-54 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G64360 | 41.016 | 256 | 123 | 9 | 7 | 250 | 17 | 256 | 5.13e-53 | 182 |
| MsG0580028246.01.T01 | AT5G09540 | 39.600 | 250 | 120 | 6 | 5 | 251 | 11 | 232 | 3.69e-50 | 169 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT5G37380 | 30.961 | 281 | 137 | 5 | 1 | 227 | 1 | 278 | 1.58e-36 | 137 |
| MsG0580028246.01.T01 | AT4G19570 | 31.679 | 262 | 134 | 6 | 1 | 228 | 1 | 251 | 1.74e-31 | 125 |
| MsG0580028246.01.T01 | AT3G04980 | 35.268 | 224 | 114 | 5 | 1 | 221 | 1 | 196 | 3.31e-31 | 125 |
| MsG0580028246.01.T01 | AT3G04980 | 35.268 | 224 | 114 | 5 | 1 | 221 | 1 | 196 | 3.31e-31 | 125 |
| MsG0580028246.01.T01 | AT1G62970 | 43.846 | 130 | 68 | 2 | 7 | 131 | 17 | 146 | 6.49e-30 | 121 |
| MsG0580028246.01.T01 | AT1G62970 | 47.500 | 80 | 38 | 2 | 171 | 250 | 631 | 706 | 4.98e-21 | 95.1 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 1.66e-29 | 119 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 5.31e-29 | 118 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 5.31e-29 | 118 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 5.31e-29 | 118 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 6.10e-29 | 118 |
| MsG0580028246.01.T01 | AT5G53150 | 32.636 | 239 | 139 | 7 | 1 | 221 | 1 | 235 | 6.10e-29 | 118 |
| MsG0580028246.01.T01 | AT3G04980 | 36.634 | 202 | 97 | 5 | 23 | 221 | 5 | 178 | 8.63e-29 | 118 |
| MsG0580028246.01.T01 | AT4G19580 | 45.833 | 120 | 64 | 1 | 1 | 120 | 1 | 119 | 9.38e-27 | 108 |
| MsG0580028246.01.T01 | AT5G27240 | 33.032 | 221 | 117 | 4 | 1 | 221 | 1 | 190 | 5.67e-26 | 109 |
| MsG0580028246.01.T01 | AT5G27240 | 33.032 | 221 | 117 | 4 | 1 | 221 | 1 | 190 | 5.67e-26 | 109 |
| MsG0580028246.01.T01 | AT5G27240 | 33.032 | 221 | 117 | 4 | 1 | 221 | 1 | 190 | 5.67e-26 | 109 |
| MsG0580028246.01.T01 | AT2G25560 | 29.218 | 243 | 151 | 7 | 1 | 231 | 1 | 234 | 6.17e-25 | 106 |
| MsG0580028246.01.T01 | AT4G19590 | 43.077 | 130 | 72 | 2 | 1 | 129 | 1 | 129 | 6.36e-25 | 104 |
| MsG0580028246.01.T01 | AT4G19590 | 43.077 | 130 | 72 | 2 | 1 | 129 | 1 | 129 | 7.03e-25 | 103 |
| MsG0580028246.01.T01 | AT3G06340 | 30.709 | 254 | 155 | 8 | 1 | 241 | 1 | 246 | 1.03e-24 | 105 |
| MsG0580028246.01.T01 | AT3G06340 | 30.709 | 254 | 155 | 8 | 1 | 241 | 1 | 246 | 1.03e-24 | 105 |
| MsG0580028246.01.T01 | AT3G06340 | 30.709 | 254 | 155 | 8 | 1 | 241 | 1 | 246 | 1.03e-24 | 105 |
| MsG0580028246.01.T01 | AT3G06340 | 30.709 | 254 | 155 | 8 | 1 | 241 | 1 | 246 | 1.03e-24 | 105 |
| MsG0580028246.01.T01 | AT2G05230 | 29.487 | 234 | 147 | 5 | 1 | 234 | 1 | 216 | 1.76e-24 | 105 |
| MsG0580028246.01.T01 | AT2G05250 | 29.487 | 234 | 147 | 5 | 1 | 234 | 1 | 216 | 1.76e-24 | 105 |
| MsG0580028246.01.T01 | AT5G37750 | 31.897 | 232 | 111 | 9 | 1 | 231 | 16 | 201 | 1.36e-23 | 98.2 |
| MsG0580028246.01.T01 | AT4G19590 | 43.697 | 119 | 65 | 2 | 12 | 129 | 1 | 118 | 7.43e-23 | 98.2 |
| MsG0580028246.01.T01 | AT5G37440 | 31.034 | 232 | 117 | 8 | 1 | 231 | 16 | 205 | 3.11e-21 | 92.4 |
| MsG0580028246.01.T01 | AT1G62970 | 47.500 | 80 | 38 | 2 | 171 | 250 | 476 | 551 | 4.45e-21 | 95.1 |
| MsG0580028246.01.T01 | AT5G18750 | 26.568 | 271 | 181 | 5 | 3 | 265 | 2 | 262 | 5.71e-20 | 91.7 |
| MsG0580028246.01.T01 | AT2G35540 | 27.638 | 199 | 105 | 5 | 23 | 221 | 28 | 187 | 2.55e-15 | 77.4 |
| MsG0580028246.01.T01 | AT5G37760 | 35.593 | 118 | 46 | 1 | 12 | 129 | 78 | 165 | 3.41e-12 | 65.5 |
Find 128 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGGGCCTGGGCCTGTTAA+TGG | 0.225894 | 5:-77205848 | MsG0580028246.01.T01:CDS |
| GTCTTTGCCGCCGTTAGTTC+CGG | 0.247795 | 5:-77205636 | MsG0580028246.01.T01:CDS |
| CGGGTTGATTTATCTGTTCC+TGG | 0.254773 | 5:-77205911 | MsG0580028246.01.T01:CDS |
| AGCTAGGATTGCGAATTCTT+TGG | 0.273521 | 5:+77206237 | None:intergenic |
| CTGGTTCTTCCCTTCCGAAT+TGG | 0.277883 | 5:-77205454 | MsG0580028246.01.T01:CDS |
| AGAGGCTTATTATTGTTGTT+GGG | 0.298683 | 5:-77205609 | MsG0580028246.01.T01:CDS |
| TCATAATGAGATTTCTTTAC+CGG | 0.303274 | 5:+77205956 | None:intergenic |
| AACCCATTAGATCTCGGTTT+TGG | 0.304546 | 5:+77206260 | None:intergenic |
| GATTTATCACAACTAGAATT+AGG | 0.306766 | 5:+77205680 | None:intergenic |
| TCAAGCTCGTTGCTGATGCT+TGG | 0.313787 | 5:-77205994 | MsG0580028246.01.T01:CDS |
| AAGAGGCTTATTATTGTTGT+TGG | 0.321058 | 5:-77205610 | MsG0580028246.01.T01:CDS |
| CTCGGCCTTCCACGCTTCTT+CGG | 0.324813 | 5:+77205296 | None:intergenic |
| AGTTGTGATAAATCATTTCA+TGG | 0.333399 | 5:-77205671 | MsG0580028246.01.T01:CDS |
| TCTTTGCCGCCGTTAGTTCC+GGG | 0.334004 | 5:-77205635 | MsG0580028246.01.T01:CDS |
| CGGAGAACAGGAACCGGGCC+TGG | 0.336095 | 5:-77205860 | MsG0580028246.01.T01:CDS |
| CCGGGCCTGGGCCTGTTAAT+GGG | 0.339666 | 5:-77205847 | MsG0580028246.01.T01:CDS |
| TGATTTATCTGTTCCTGGTT+GGG | 0.343243 | 5:-77205906 | MsG0580028246.01.T01:CDS |
| GGCTGAGCCGGAGCTGGTTC+CGG | 0.345590 | 5:-77205534 | MsG0580028246.01.T01:CDS |
| TCTCCAAAACCGAGATCTAA+TGG | 0.347946 | 5:-77206263 | MsG0580028246.01.T01:CDS |
| CAAGCTCGTTGCTGATGCTT+GGG | 0.351834 | 5:-77205993 | MsG0580028246.01.T01:CDS |
| ACCTGTTCCTGTGCCAATAT+CGG | 0.366250 | 5:-77205489 | MsG0580028246.01.T01:CDS |
| TCATACAAACGGTAACAATA+AGG | 0.370052 | 5:+77205740 | None:intergenic |
| TGGAGGATGGAGTACCAATC+AGG | 0.372454 | 5:+77206124 | None:intergenic |
| ACCGATATTGGCACAGGAAC+AGG | 0.373287 | 5:+77205488 | None:intergenic |
| CGTGCGCCAGGCCCATTAAC+AGG | 0.373977 | 5:+77205836 | None:intergenic |
| GACGCACCTTGAACCGATAT+TGG | 0.378527 | 5:+77205476 | None:intergenic |
| ACGAGGTCAGGTGCTGTTAC+TGG | 0.390351 | 5:-77205347 | MsG0580028246.01.T01:CDS |
| CGTCGGATCGGCGATCGATT+TGG | 0.391423 | 5:+77206104 | None:intergenic |
| TTTCCTATGGGGTTTGTGCT+TGG | 0.395735 | 5:-77205581 | MsG0580028246.01.T01:CDS |
| GTTGTTGTTGACGCGTTTCT+CGG | 0.402912 | 5:+77206147 | None:intergenic |
| AAGTTACCGGTTCGGAGAAC+AGG | 0.412646 | 5:-77205872 | MsG0580028246.01.T01:CDS |
| TGAGTTTCCAAAGGCTTATG+AGG | 0.414510 | 5:-77205720 | MsG0580028246.01.T01:CDS |
| AGGAGGTAGCTGCGGATGTT+CGG | 0.416880 | 5:-77205790 | MsG0580028246.01.T01:CDS |
| TTGATTTATCTGTTCCTGGT+TGG | 0.420521 | 5:-77205907 | MsG0580028246.01.T01:CDS |
| GGTTCAGCAAGATAAGTTAC+CGG | 0.424901 | 5:-77205885 | MsG0580028246.01.T01:CDS |
| GAAACCGAACCCCTTCTTGA+AGG | 0.427417 | 5:-77206211 | MsG0580028246.01.T01:CDS |
| CCTGGGCCTGTTAATGGGCC+TGG | 0.430365 | 5:-77205842 | MsG0580028246.01.T01:CDS |
| GGAGAACAGGAACCGGGCCT+GGG | 0.435961 | 5:-77205859 | MsG0580028246.01.T01:CDS |
| GTTTCGAATGGTGTTGCTAC+TGG | 0.436673 | 5:-77205320 | MsG0580028246.01.T01:CDS |
| CAAAACCCCTCATAAGCCTT+TGG | 0.439797 | 5:+77205713 | None:intergenic |
| GCTCCTGTGCCGGTGGAGAA+TGG | 0.445491 | 5:-77205425 | MsG0580028246.01.T01:CDS |
| GGAACCTTCAAGAAGGGGTT+CGG | 0.445565 | 5:+77206207 | None:intergenic |
| ACAGGAGCTGGCATCCAATT+CGG | 0.445724 | 5:+77205440 | None:intergenic |
| GACGGTACTGTTTCTTGATA+AGG | 0.449342 | 5:+77206074 | None:intergenic |
| TGAGGAGAAACGGGCTGAGC+CGG | 0.450910 | 5:-77205546 | MsG0580028246.01.T01:CDS |
| GCCGCACTGTTCCGTGCGCC+AGG | 0.452311 | 5:+77205824 | None:intergenic |
| CTCCAAAACCGAGATCTAAT+GGG | 0.457440 | 5:-77206262 | MsG0580028246.01.T01:CDS |
| CCCATTAACAGGCCCAGGCC+CGG | 0.461205 | 5:+77205847 | None:intergenic |
| TCCGGCTGCACCACAATCTC+CGG | 0.462111 | 5:+77205515 | None:intergenic |
| TTCTCCACCGGCACAGGAGC+TGG | 0.466252 | 5:+77205428 | None:intergenic |
| ATGATGGTGCTGAGGAGAAA+CGG | 0.470793 | 5:-77205556 | MsG0580028246.01.T01:CDS |
| GGGTTTGTGCTTGGAAATGA+TGG | 0.471974 | 5:-77205572 | MsG0580028246.01.T01:CDS |
| GCTGAAGCAGAACGGTTACT+AGG | 0.472433 | 5:-77206301 | MsG0580028246.01.T01:CDS |
| CCGGTTCCTGTTCTCCGAAC+CGG | 0.477199 | 5:+77205866 | None:intergenic |
| CCGGTTCGGAGAACAGGAAC+CGG | 0.481490 | 5:-77205866 | MsG0580028246.01.T01:CDS |
| ATATCGGTTCAAGGTGCGTC+TGG | 0.485166 | 5:-77205473 | MsG0580028246.01.T01:CDS |
| GAGGCTTATTATTGTTGTTG+GGG | 0.485305 | 5:-77205608 | MsG0580028246.01.T01:CDS |
| CTGTTAATGGGCCTGGCGCA+CGG | 0.486067 | 5:-77205835 | MsG0580028246.01.T01:CDS |
| TGATGGTGCTGAGGAGAAAC+GGG | 0.491320 | 5:-77205555 | MsG0580028246.01.T01:CDS |
| CCAGGCCCATTAACAGGCCC+AGG | 0.491448 | 5:+77205842 | None:intergenic |
| CAGTGCGGCGTCTGCTAGAG+AGG | 0.492734 | 5:-77205810 | MsG0580028246.01.T01:CDS |
| GAAACGGGCTGAGCCGGAGC+TGG | 0.495966 | 5:-77205540 | MsG0580028246.01.T01:CDS |
| CTTGATAAGGTCGAGGTCGT+CGG | 0.496738 | 5:+77206087 | None:intergenic |
| GGCACAGGAACAGGTTCATC+CGG | 0.496793 | 5:+77205497 | None:intergenic |
| CTTTGGAACCCATTAGATCT+CGG | 0.497100 | 5:+77206254 | None:intergenic |
| TCCGGAGATTGTGGTGCAGC+CGG | 0.498330 | 5:-77205516 | MsG0580028246.01.T01:CDS |
| GCGTCAACAACAACCCTGAT+TGG | 0.505372 | 5:-77206138 | MsG0580028246.01.T01:CDS |
| AGCAAGATAAGTTACCGGTT+CGG | 0.507342 | 5:-77205880 | MsG0580028246.01.T01:CDS |
| ACAATCTCCGGAACCAGCTC+CGG | 0.508449 | 5:+77205527 | None:intergenic |
| CGAAGAAGCGTGGAAGGCCG+AGG | 0.520094 | 5:-77205295 | MsG0580028246.01.T01:CDS |
| ATGAGATTTCTTTACCGGAT+CGG | 0.523209 | 5:+77205961 | None:intergenic |
| TCGGCGATCGATTTGGAGGA+TGG | 0.524332 | 5:+77206111 | None:intergenic |
| GCGAGGGTGACTACGAGGTC+AGG | 0.527853 | 5:-77205359 | MsG0580028246.01.T01:CDS |
| GCCTCTTGCCCCGGAACTAA+CGG | 0.529491 | 5:+77205626 | None:intergenic |
| CCTGTGCCAATATCGGTTCA+AGG | 0.531176 | 5:-77205482 | MsG0580028246.01.T01:CDS |
| CAATAATAAGCCTCTTGCCC+CGG | 0.535368 | 5:+77205617 | None:intergenic |
| CTTTGCCGCCGTTAGTTCCG+GGG | 0.538633 | 5:-77205634 | MsG0580028246.01.T01:CDS |
| GGAACTAACGGCGGCAAAGA+CGG | 0.541061 | 5:+77205638 | None:intergenic |
| GGGGTTCGGTTTCTTGAGCT+AGG | 0.541488 | 5:+77206221 | None:intergenic |
| GCCGTTAGTTCCGGGGCAAG+AGG | 0.542963 | 5:-77205627 | MsG0580028246.01.T01:CDS |
| TTGGGCTGTTCTCTCCGATC+CGG | 0.543505 | 5:-77205975 | MsG0580028246.01.T01:CDS |
| CCACCATTCTCCACCGGCAC+AGG | 0.546199 | 5:+77205422 | None:intergenic |
| CGGTTCGGAGAACAGGAACC+GGG | 0.548711 | 5:-77205865 | MsG0580028246.01.T01:CDS |
| GGAGCTGGTTCCGGAGATTG+TGG | 0.550680 | 5:-77205525 | MsG0580028246.01.T01:CDS |
| CTGGTCCGAAGAAGCGTGGA+AGG | 0.553109 | 5:-77205301 | MsG0580028246.01.T01:CDS |
| ACACATTAATAATACTTCCT+CGG | 0.553318 | 5:+77205278 | None:intergenic |
| TTGGATGCCAGCTCCTGTGC+CGG | 0.558594 | 5:-77205435 | MsG0580028246.01.T01:CDS |
| GAGTTTCCAAAGGCTTATGA+GGG | 0.562531 | 5:-77205719 | MsG0580028246.01.T01:CDS |
| CGGATCGGCGATCGATTTGG+AGG | 0.562844 | 5:+77206107 | None:intergenic |
| CTGATCGGAACCTTCAAGAA+GGG | 0.567747 | 5:+77206201 | None:intergenic |
| CCTTTGGAAACTCATACAAA+CGG | 0.569715 | 5:+77205729 | None:intergenic |
| ACTGTTTCTTGATAAGGTCG+AGG | 0.571823 | 5:+77206080 | None:intergenic |
| GTTACTGGTGGTGTTTCGAA+TGG | 0.572483 | 5:-77205332 | MsG0580028246.01.T01:CDS |
| AACGAGCTTGAAAGCATGAT+CGG | 0.575283 | 5:+77206006 | None:intergenic |
| GAGCTGGCATCCAATTCGGA+AGG | 0.575675 | 5:+77205444 | None:intergenic |
| CCGTTTGTATGAGTTTCCAA+AGG | 0.580125 | 5:-77205729 | MsG0580028246.01.T01:CDS |
| GATGCCAGCTCCTGTGCCGG+TGG | 0.580734 | 5:-77205432 | MsG0580028246.01.T01:CDS |
| TGCTAGAGAGGAGGTAGCTG+CGG | 0.582595 | 5:-77205798 | MsG0580028246.01.T01:CDS |
| TCTGATCGGAACCTTCAAGA+AGG | 0.582970 | 5:+77206200 | None:intergenic |
| GAATAATGTAGTGTCGGTGA+CGG | 0.594988 | 5:-77205399 | MsG0580028246.01.T01:CDS |
| CTGTGCCGGTGGAGAATGGT+GGG | 0.598027 | 5:-77205421 | MsG0580028246.01.T01:CDS |
| TTATCTTGCTGAACCCAACC+AGG | 0.599185 | 5:+77205893 | None:intergenic |
| TAAGGTCGAGGTCGTCGGAT+CGG | 0.599276 | 5:+77206092 | None:intergenic |
| CATGATCGGCGAAATGAAAG+CGG | 0.602178 | 5:+77206020 | None:intergenic |
| GGAGGATGGAGTACCAATCA+GGG | 0.605659 | 5:+77206125 | None:intergenic |
| TTATTCCCACCATTCTCCAC+CGG | 0.607213 | 5:+77205416 | None:intergenic |
| TTTCCAAGCACAAACCCCAT+AGG | 0.607736 | 5:+77205578 | None:intergenic |
| CAACTCGAGCTGAAGCAGAA+CGG | 0.616246 | 5:-77206309 | MsG0580028246.01.T01:CDS |
| CCTTGAACCGATATTGGCAC+AGG | 0.616884 | 5:+77205482 | None:intergenic |
| TGCGGCGTCTGCTAGAGAGG+AGG | 0.627606 | 5:-77205807 | MsG0580028246.01.T01:CDS |
| TGATCGGAACCTTCAAGAAG+GGG | 0.630767 | 5:+77206202 | None:intergenic |
| GAAGGAGAAGAGCGAGACGA+CGG | 0.630909 | 5:+77206056 | None:intergenic |
| TGGTGGGAATAATGTAGTGT+CGG | 0.631541 | 5:-77205405 | MsG0580028246.01.T01:CDS |
| TACTGTTACTACACCGGCGA+GGG | 0.635082 | 5:-77205375 | MsG0580028246.01.T01:CDS |
| GACCTCGTAGTCACCCTCGC+CGG | 0.635892 | 5:+77205362 | None:intergenic |
| CCTGTGCCGGTGGAGAATGG+TGG | 0.638505 | 5:-77205422 | MsG0580028246.01.T01:CDS |
| GCTACTGGTCCGAAGAAGCG+TGG | 0.646377 | 5:-77205305 | MsG0580028246.01.T01:CDS |
| AGCTGGCATCCAATTCGGAA+GGG | 0.658201 | 5:+77205445 | None:intergenic |
| AGTTTCCAAAGGCTTATGAG+GGG | 0.662154 | 5:-77205718 | MsG0580028246.01.T01:CDS |
| GATGATTGCTAAGATCTGAT+CGG | 0.664035 | 5:+77206186 | None:intergenic |
| GTTGTTGACGCGTTTCTCGG+AGG | 0.668902 | 5:+77206150 | None:intergenic |
| GCCTGGCGCACGGAACAGTG+CGG | 0.689479 | 5:-77205825 | MsG0580028246.01.T01:CDS |
| AGGTCAGGTGCTGTTACTGG+TGG | 0.699007 | 5:-77205344 | MsG0580028246.01.T01:CDS |
| GCTTGGAAATGATGGTGCTG+AGG | 0.710717 | 5:-77205564 | MsG0580028246.01.T01:CDS |
| GACGGCTACTGTTACTACAC+CGG | 0.715044 | 5:-77205381 | MsG0580028246.01.T01:CDS |
| TCTTGCCCCGGAACTAACGG+CGG | 0.715743 | 5:+77205629 | None:intergenic |
| CACCGGCGAGGGTGACTACG+AGG | 0.718815 | 5:-77205364 | MsG0580028246.01.T01:CDS |
| CTACTGTTACTACACCGGCG+AGG | 0.729658 | 5:-77205376 | MsG0580028246.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGTTGTGATAAATCATTTCA+TGG | - | Chr5:77205928-77205947 | MsG0580028246.01.T01:CDS | 25.0% |
| ! | GATTTATCACAACTAGAATT+AGG | + | Chr5:77205922-77205941 | None:intergenic | 25.0% |
| ! | TCATAATGAGATTTCTTTAC+CGG | + | Chr5:77205646-77205665 | None:intergenic | 25.0% |
| AAGAGGCTTATTATTGTTGT+TGG | - | Chr5:77205989-77206008 | MsG0580028246.01.T01:CDS | 30.0% | |
| TCATACAAACGGTAACAATA+AGG | + | Chr5:77205862-77205881 | None:intergenic | 30.0% | |
| ! | AGAGGCTTATTATTGTTGTT+GGG | - | Chr5:77205990-77206009 | MsG0580028246.01.T01:CDS | 30.0% |
| ATGAGATTTCTTTACCGGAT+CGG | + | Chr5:77205641-77205660 | None:intergenic | 35.0% | |
| GATGATTGCTAAGATCTGAT+CGG | + | Chr5:77205416-77205435 | None:intergenic | 35.0% | |
| TGATTTATCTGTTCCTGGTT+GGG | - | Chr5:77205693-77205712 | MsG0580028246.01.T01:CDS | 35.0% | |
| TTGATTTATCTGTTCCTGGT+TGG | - | Chr5:77205692-77205711 | MsG0580028246.01.T01:CDS | 35.0% | |
| ! | CCTTTGGAAACTCATACAAA+CGG | + | Chr5:77205873-77205892 | None:intergenic | 35.0% |
| ! | GAGGCTTATTATTGTTGTTG+GGG | - | Chr5:77205991-77206010 | MsG0580028246.01.T01:CDS | 35.0% |
| !!! | AAGATCTGTCTTTTTTCGCT+CGG | - | Chr5:77205668-77205687 | MsG0580028246.01.T01:CDS | 35.0% |
| !!! | TGTTGGGGTTTTTTTCCTAT+GGG | - | Chr5:77206006-77206025 | MsG0580028246.01.T01:CDS | 35.0% |
| !!! | TTGTTGGGGTTTTTTTCCTA+TGG | - | Chr5:77206005-77206024 | MsG0580028246.01.T01:CDS | 35.0% |
| AGCTAGGATTGCGAATTCTT+TGG | + | Chr5:77205365-77205384 | None:intergenic | 40.0% | |
| AGTTTCCAAAGGCTTATGAG+GGG | - | Chr5:77205881-77205900 | MsG0580028246.01.T01:CDS | 40.0% | |
| CCGTTTGTATGAGTTTCCAA+AGG | - | Chr5:77205870-77205889 | MsG0580028246.01.T01:CDS | 40.0% | |
| CTCCAAAACCGAGATCTAAT+GGG | - | Chr5:77205337-77205356 | MsG0580028246.01.T01:CDS | 40.0% | |
| GAGTTTCCAAAGGCTTATGA+GGG | - | Chr5:77205880-77205899 | MsG0580028246.01.T01:CDS | 40.0% | |
| GGTTCAGCAAGATAAGTTAC+CGG | - | Chr5:77205714-77205733 | MsG0580028246.01.T01:CDS | 40.0% | |
| TCTCCAAAACCGAGATCTAA+TGG | - | Chr5:77205336-77205355 | MsG0580028246.01.T01:CDS | 40.0% | |
| TGAGTTTCCAAAGGCTTATG+AGG | - | Chr5:77205879-77205898 | MsG0580028246.01.T01:CDS | 40.0% | |
| TGGTGGGAATAATGTAGTGT+CGG | - | Chr5:77206194-77206213 | MsG0580028246.01.T01:CDS | 40.0% | |
| ! | AAATGAAAGCGGCTTTTGTC+GGG | + | Chr5:77205571-77205590 | None:intergenic | 40.0% |
| ! | AACCCATTAGATCTCGGTTT+TGG | + | Chr5:77205342-77205361 | None:intergenic | 40.0% |
| ! | AACGAGCTTGAAAGCATGAT+CGG | + | Chr5:77205596-77205615 | None:intergenic | 40.0% |
| ! | ACTGTTTCTTGATAAGGTCG+AGG | + | Chr5:77205522-77205541 | None:intergenic | 40.0% |
| ! | AGCAAGATAAGTTACCGGTT+CGG | - | Chr5:77205719-77205738 | MsG0580028246.01.T01:CDS | 40.0% |
| ! | GAAATGAAAGCGGCTTTTGT+CGG | + | Chr5:77205572-77205591 | None:intergenic | 40.0% |
| ! | GACGGTACTGTTTCTTGATA+AGG | + | Chr5:77205528-77205547 | None:intergenic | 40.0% |
| ! | TTCGGAGAAATGCGACTTTT+TGG | - | Chr5:77205827-77205846 | MsG0580028246.01.T01:CDS | 40.0% |
| !! | CTTTGGAACCCATTAGATCT+CGG | + | Chr5:77205348-77205367 | None:intergenic | 40.0% |
| !! | GAATAATGTAGTGTCGGTGA+CGG | - | Chr5:77206200-77206219 | MsG0580028246.01.T01:CDS | 40.0% |
| !!! | AGATCTGTCTTTTTTCGCTC+GGG | - | Chr5:77205669-77205688 | MsG0580028246.01.T01:CDS | 40.0% |
| !!! | GTTGGGGTTTTTTTCCTATG+GGG | - | Chr5:77206007-77206026 | MsG0580028246.01.T01:CDS | 40.0% |
| !!! | TCGGTTTTGGAGAAGCTTTT+CGG | + | Chr5:77205329-77205348 | None:intergenic | 40.0% |
| ACCTGTTCCTGTGCCAATAT+CGG | - | Chr5:77206110-77206129 | MsG0580028246.01.T01:CDS | 45.0% | |
| CAAAACCCCTCATAAGCCTT+TGG | + | Chr5:77205889-77205908 | None:intergenic | 45.0% | |
| CAATAATAAGCCTCTTGCCC+CGG | + | Chr5:77205985-77206004 | None:intergenic | 45.0% | |
| CATGATCGGCGAAATGAAAG+CGG | + | Chr5:77205582-77205601 | None:intergenic | 45.0% | |
| CTGATCGGAACCTTCAAGAA+GGG | + | Chr5:77205401-77205420 | None:intergenic | 45.0% | |
| GGGTTTGTGCTTGGAAATGA+TGG | - | Chr5:77206027-77206046 | MsG0580028246.01.T01:CDS | 45.0% | |
| TCTGATCGGAACCTTCAAGA+AGG | + | Chr5:77205402-77205421 | None:intergenic | 45.0% | |
| TGATCGGAACCTTCAAGAAG+GGG | + | Chr5:77205400-77205419 | None:intergenic | 45.0% | |
| TTATCTTGCTGAACCCAACC+AGG | + | Chr5:77205709-77205728 | None:intergenic | 45.0% | |
| TTATTCCCACCATTCTCCAC+CGG | + | Chr5:77206186-77206205 | None:intergenic | 45.0% | |
| TTTCCAAGCACAAACCCCAT+AGG | + | Chr5:77206024-77206043 | None:intergenic | 45.0% | |
| TTTCCTATGGGGTTTGTGCT+TGG | - | Chr5:77206018-77206037 | MsG0580028246.01.T01:CDS | 45.0% | |
| ! | ATGATGGTGCTGAGGAGAAA+CGG | - | Chr5:77206043-77206062 | MsG0580028246.01.T01:CDS | 45.0% |
| ! | GTTACTGGTGGTGTTTCGAA+TGG | - | Chr5:77206267-77206286 | MsG0580028246.01.T01:CDS | 45.0% |
| ! | GTTGTTGTTGACGCGTTTCT+CGG | + | Chr5:77205455-77205474 | None:intergenic | 45.0% |
| !! | CGGGTTGATTTATCTGTTCC+TGG | - | Chr5:77205688-77205707 | MsG0580028246.01.T01:CDS | 45.0% |
| !! | GTTTCGAATGGTGTTGCTAC+TGG | - | Chr5:77206279-77206298 | MsG0580028246.01.T01:CDS | 45.0% |
| ACAGGAGCTGGCATCCAATT+CGG | + | Chr5:77206162-77206181 | None:intergenic | 50.0% | |
| ACCGATATTGGCACAGGAAC+AGG | + | Chr5:77206114-77206133 | None:intergenic | 50.0% | |
| AGCTGGCATCCAATTCGGAA+GGG | + | Chr5:77206157-77206176 | None:intergenic | 50.0% | |
| CAACTCGAGCTGAAGCAGAA+CGG | - | Chr5:77205290-77205309 | MsG0580028246.01.T01:CDS | 50.0% | |
| CAAGCTCGTTGCTGATGCTT+GGG | - | Chr5:77205606-77205625 | MsG0580028246.01.T01:CDS | 50.0% | |
| CCTTGAACCGATATTGGCAC+AGG | + | Chr5:77206120-77206139 | None:intergenic | 50.0% | |
| CTTGATAAGGTCGAGGTCGT+CGG | + | Chr5:77205515-77205534 | None:intergenic | 50.0% | |
| GAAACCGAACCCCTTCTTGA+AGG | - | Chr5:77205388-77205407 | MsG0580028246.01.T01:CDS | 50.0% | |
| GACGCACCTTGAACCGATAT+TGG | + | Chr5:77206126-77206145 | None:intergenic | 50.0% | |
| GACGGCTACTGTTACTACAC+CGG | - | Chr5:77206218-77206237 | MsG0580028246.01.T01:CDS | 50.0% | |
| GCGTCAACAACAACCCTGAT+TGG | - | Chr5:77205461-77205480 | MsG0580028246.01.T01:CDS | 50.0% | |
| GCTGAAGCAGAACGGTTACT+AGG | - | Chr5:77205298-77205317 | MsG0580028246.01.T01:CDS | 50.0% | |
| GGAACCTTCAAGAAGGGGTT+CGG | + | Chr5:77205395-77205414 | None:intergenic | 50.0% | |
| TACTGTTACTACACCGGCGA+GGG | - | Chr5:77206224-77206243 | MsG0580028246.01.T01:CDS | 50.0% | |
| TCAAGCTCGTTGCTGATGCT+TGG | - | Chr5:77205605-77205624 | MsG0580028246.01.T01:CDS | 50.0% | |
| ! | CTGGTTCTTCCCTTCCGAAT+TGG | - | Chr5:77206145-77206164 | MsG0580028246.01.T01:CDS | 50.0% |
| ! | GCTTGGAAATGATGGTGCTG+AGG | - | Chr5:77206035-77206054 | MsG0580028246.01.T01:CDS | 50.0% |
| ! | GGAGGATGGAGTACCAATCA+GGG | + | Chr5:77205477-77205496 | None:intergenic | 50.0% |
| ! | TGATGGTGCTGAGGAGAAAC+GGG | - | Chr5:77206044-77206063 | MsG0580028246.01.T01:CDS | 50.0% |
| ! | TGGAGGATGGAGTACCAATC+AGG | + | Chr5:77205478-77205497 | None:intergenic | 50.0% |
| !! | AAGTTACCGGTTCGGAGAAC+AGG | - | Chr5:77205727-77205746 | MsG0580028246.01.T01:CDS | 50.0% |
| !! | ATATCGGTTCAAGGTGCGTC+TGG | - | Chr5:77206126-77206145 | MsG0580028246.01.T01:CDS | 50.0% |
| !! | CCTGTGCCAATATCGGTTCA+AGG | - | Chr5:77206117-77206136 | MsG0580028246.01.T01:CDS | 50.0% |
| ACAATCTCCGGAACCAGCTC+CGG | + | Chr5:77206075-77206094 | None:intergenic | 55.0% | |
| AGGAGGTAGCTGCGGATGTT+CGG | - | Chr5:77205809-77205828 | MsG0580028246.01.T01:CDS | 55.0% | |
| CTACTGTTACTACACCGGCG+AGG | - | Chr5:77206223-77206242 | MsG0580028246.01.T01:CDS | 55.0% | |
| GAAGGAGAAGAGCGAGACGA+CGG | + | Chr5:77205546-77205565 | None:intergenic | 55.0% | |
| GAGCTGGCATCCAATTCGGA+AGG | + | Chr5:77206158-77206177 | None:intergenic | 55.0% | |
| GGAACTAACGGCGGCAAAGA+CGG | + | Chr5:77205964-77205983 | None:intergenic | 55.0% | |
| GGCACAGGAACAGGTTCATC+CGG | + | Chr5:77206105-77206124 | None:intergenic | 55.0% | |
| GTCTTTGCCGCCGTTAGTTC+CGG | - | Chr5:77205963-77205982 | MsG0580028246.01.T01:CDS | 55.0% | |
| GTTGTTGACGCGTTTCTCGG+AGG | + | Chr5:77205452-77205471 | None:intergenic | 55.0% | |
| TAAGGTCGAGGTCGTCGGAT+CGG | + | Chr5:77205510-77205529 | None:intergenic | 55.0% | |
| TCTTTGCCGCCGTTAGTTCC+GGG | - | Chr5:77205964-77205983 | MsG0580028246.01.T01:CDS | 55.0% | |
| TGCTAGAGAGGAGGTAGCTG+CGG | - | Chr5:77205801-77205820 | MsG0580028246.01.T01:CDS | 55.0% | |
| TTGGGCTGTTCTCTCCGATC+CGG | - | Chr5:77205624-77205643 | MsG0580028246.01.T01:CDS | 55.0% | |
| ! | AGCGGCTTTTGTCGGGATGA+AGG | + | Chr5:77205564-77205583 | None:intergenic | 55.0% |
| ! | GGGGTTCGGTTTCTTGAGCT+AGG | + | Chr5:77205381-77205400 | None:intergenic | 55.0% |
| !! | ACGAGGTCAGGTGCTGTTAC+TGG | - | Chr5:77206252-77206271 | MsG0580028246.01.T01:CDS | 55.0% |
| !! | AGGTCAGGTGCTGTTACTGG+TGG | - | Chr5:77206255-77206274 | MsG0580028246.01.T01:CDS | 55.0% |
| !! | TCGGCGATCGATTTGGAGGA+TGG | + | Chr5:77205491-77205510 | None:intergenic | 55.0% |
| CCGGTTCCTGTTCTCCGAAC+CGG | + | Chr5:77205736-77205755 | None:intergenic | 60.0% | |
| CGTCGGATCGGCGATCGATT+TGG | + | Chr5:77205498-77205517 | None:intergenic | 60.0% | |
| CTCGGCCTTCCACGCTTCTT+CGG | + | Chr5:77206306-77206325 | None:intergenic | 60.0% | |
| CTTTGCCGCCGTTAGTTCCG+GGG | - | Chr5:77205965-77205984 | MsG0580028246.01.T01:CDS | 60.0% | |
| GCCTCTTGCCCCGGAACTAA+CGG | + | Chr5:77205976-77205995 | None:intergenic | 60.0% | |
| GCTACTGGTCCGAAGAAGCG+TGG | - | Chr5:77206294-77206313 | MsG0580028246.01.T01:CDS | 60.0% | |
| TCCGGAGATTGTGGTGCAGC+CGG | - | Chr5:77206083-77206102 | MsG0580028246.01.T01:CDS | 60.0% | |
| TCCGGCTGCACCACAATCTC+CGG | + | Chr5:77206087-77206106 | None:intergenic | 60.0% | |
| TCTTGCCCCGGAACTAACGG+CGG | + | Chr5:77205973-77205992 | None:intergenic | 60.0% | |
| TTGGATGCCAGCTCCTGTGC+CGG | - | Chr5:77206164-77206183 | MsG0580028246.01.T01:CDS | 60.0% | |
| ! | CGGTTCGGAGAACAGGAACC+GGG | - | Chr5:77205734-77205753 | MsG0580028246.01.T01:CDS | 60.0% |
| ! | CTGGTCCGAAGAAGCGTGGA+AGG | - | Chr5:77206298-77206317 | MsG0580028246.01.T01:CDS | 60.0% |
| ! | CTGTGCCGGTGGAGAATGGT+GGG | - | Chr5:77206178-77206197 | MsG0580028246.01.T01:CDS | 60.0% |
| ! | CTGTTAATGGGCCTGGCGCA+CGG | - | Chr5:77205764-77205783 | MsG0580028246.01.T01:CDS | 60.0% |
| ! | GGAGCTGGTTCCGGAGATTG+TGG | - | Chr5:77206074-77206093 | MsG0580028246.01.T01:CDS | 60.0% |
| !! | CCGGTTCGGAGAACAGGAAC+CGG | - | Chr5:77205733-77205752 | MsG0580028246.01.T01:CDS | 60.0% |
| !! | CGGATCGGCGATCGATTTGG+AGG | + | Chr5:77205495-77205514 | None:intergenic | 60.0% |
| !! | TGAGGAGAAACGGGCTGAGC+CGG | - | Chr5:77206053-77206072 | MsG0580028246.01.T01:CDS | 60.0% |
| ACCGGGCCTGGGCCTGTTAA+TGG | - | Chr5:77205751-77205770 | MsG0580028246.01.T01:CDS | 65.0% | |
| CAGTGCGGCGTCTGCTAGAG+AGG | - | Chr5:77205789-77205808 | MsG0580028246.01.T01:CDS | 65.0% | |
| CCACCATTCTCCACCGGCAC+AGG | + | Chr5:77206180-77206199 | None:intergenic | 65.0% | |
| CCAGGCCCATTAACAGGCCC+AGG | + | Chr5:77205760-77205779 | None:intergenic | 65.0% | |
| CCCATTAACAGGCCCAGGCC+CGG | + | Chr5:77205755-77205774 | None:intergenic | 65.0% | |
| CCGGGCCTGGGCCTGTTAAT+GGG | - | Chr5:77205752-77205771 | MsG0580028246.01.T01:CDS | 65.0% | |
| CGTGCGCCAGGCCCATTAAC+AGG | + | Chr5:77205766-77205785 | None:intergenic | 65.0% | |
| GACCTCGTAGTCACCCTCGC+CGG | + | Chr5:77206240-77206259 | None:intergenic | 65.0% | |
| GCCGTTAGTTCCGGGGCAAG+AGG | - | Chr5:77205972-77205991 | MsG0580028246.01.T01:CDS | 65.0% | |
| GCGAGGGTGACTACGAGGTC+AGG | - | Chr5:77206240-77206259 | MsG0580028246.01.T01:CDS | 65.0% | |
| GGAGAACAGGAACCGGGCCT+GGG | - | Chr5:77205740-77205759 | MsG0580028246.01.T01:CDS | 65.0% | |
| TGCGGCGTCTGCTAGAGAGG+AGG | - | Chr5:77205792-77205811 | MsG0580028246.01.T01:CDS | 65.0% | |
| TTCTCCACCGGCACAGGAGC+TGG | + | Chr5:77206174-77206193 | None:intergenic | 65.0% | |
| ! | CCTGGGCCTGTTAATGGGCC+TGG | - | Chr5:77205757-77205776 | MsG0580028246.01.T01:CDS | 65.0% |
| ! | CCTGTGCCGGTGGAGAATGG+TGG | - | Chr5:77206177-77206196 | MsG0580028246.01.T01:CDS | 65.0% |
| ! | CGAAGAAGCGTGGAAGGCCG+AGG | - | Chr5:77206304-77206323 | MsG0580028246.01.T01:CDS | 65.0% |
| ! | GCTCCTGTGCCGGTGGAGAA+TGG | - | Chr5:77206174-77206193 | MsG0580028246.01.T01:CDS | 65.0% |
| CACCGGCGAGGGTGACTACG+AGG | - | Chr5:77206235-77206254 | MsG0580028246.01.T01:CDS | 70.0% | |
| CGGAGAACAGGAACCGGGCC+TGG | - | Chr5:77205739-77205758 | MsG0580028246.01.T01:CDS | 70.0% | |
| GATGCCAGCTCCTGTGCCGG+TGG | - | Chr5:77206167-77206186 | MsG0580028246.01.T01:CDS | 70.0% | |
| GCCTGGCGCACGGAACAGTG+CGG | - | Chr5:77205774-77205793 | MsG0580028246.01.T01:CDS | 70.0% | |
| ! | GGCTGAGCCGGAGCTGGTTC+CGG | - | Chr5:77206065-77206084 | MsG0580028246.01.T01:CDS | 70.0% |
| !! | GAAACGGGCTGAGCCGGAGC+TGG | - | Chr5:77206059-77206078 | MsG0580028246.01.T01:CDS | 70.0% |
| GCCGCACTGTTCCGTGCGCC+AGG | + | Chr5:77205778-77205797 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 77205283 | 77206338 | 77205283 | ID=MsG0580028246.01;Name=MsG0580028246.01 |
| Chr5 | mRNA | 77205283 | 77206338 | 77205283 | ID=MsG0580028246.01.T01;Parent=MsG0580028246.01;Name=MsG0580028246.01.T01;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|351 |
| Chr5 | exon | 77205283 | 77206338 | 77205283 | ID=MsG0580028246.01.T01:exon:46298;Parent=MsG0580028246.01.T01 |
| Chr5 | CDS | 77205283 | 77206338 | 77205283 | ID=MsG0580028246.01.T01:cds;Parent=MsG0580028246.01.T01 |
| Gene Sequence |
| Protein sequence |
