AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028270.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028270.01.T01 MTR_5g066230 66.704 889 135 9 1 734 1 883 0.0 1105
MsG0580028270.01.T01 MTR_5g066240 51.398 751 272 19 2 734 1 676 0.0 597
MsG0580028270.01.T01 MTR_5g066530 71.117 412 24 3 307 624 1 411 0.0 553
MsG0580028270.01.T01 MTR_5g066530 83.871 310 28 2 446 734 343 651 4.48e-171 506
MsG0580028270.01.T01 MTR_3g100390 48.354 577 256 15 144 705 356 905 2.91e-148 458
MsG0580028270.01.T01 MTR_3g100390 48.354 577 256 15 144 705 359 908 3.59e-148 458
MsG0580028270.01.T01 MTR_2g009580 55.017 289 127 2 134 422 353 638 9.57e-98 323
MsG0580028270.01.T01 MTR_2g009580 55.017 289 127 2 134 422 387 672 1.92e-97 323
MsG0580028270.01.T01 MTR_8g064470 30.031 323 183 12 169 476 297 591 1.04e-35 144
MsG0580028270.01.T01 MTR_8g064470 33.951 162 92 6 169 328 297 445 1.98e-20 95.9
MsG0580028270.01.T01 MTR_8g064470 33.951 162 92 6 169 328 297 445 2.13e-20 95.5
MsG0580028270.01.T01 MTR_2g436660 26.066 211 121 8 180 384 261 442 1.46e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028270.01.T01 AT1G09730 55.429 350 132 5 159 489 373 717 7.33e-115 369
MsG0580028270.01.T01 AT1G09730 55.429 350 132 5 159 489 405 749 8.97e-115 369
MsG0580028270.01.T01 AT4G33620 52.045 269 123 3 156 423 281 544 6.48e-84 282
MsG0580028270.01.T01 AT1G60220 30.651 261 154 8 170 419 332 576 1.44e-32 134
MsG0580028270.01.T01 AT1G10570 33.208 265 144 10 170 419 186 432 4.26e-32 130
MsG0580028270.01.T01 AT1G10570 33.208 265 144 10 170 419 316 562 2.06e-31 130
MsG0580028270.01.T01 AT1G10570 33.208 265 144 10 170 419 317 563 2.15e-31 130
MsG0580028270.01.T01 AT4G15880 28.125 192 102 8 190 375 298 459 1.70e-17 86.7
MsG0580028270.01.T01 AT3G06910 27.083 192 105 8 190 375 310 472 4.39e-14 75.9

Find 162 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCAACATGTTCGTAAA+TGG 0.204655 5:-77582174 MsG0580028270.01.T01:CDS
ATCTTACAATACTTCTAATA+TGG 0.230652 5:-77580606 MsG0580028270.01.T01:CDS
ATCTTACAATACTTCTAATA+TGG 0.230652 5:-77580810 MsG0580028270.01.T01:CDS
CTTTCGAAAGCTGGCTGATA+TGG 0.231272 5:-77582233 MsG0580028270.01.T01:CDS
TGAACCAGTTTCCTCCTTCT+AGG 0.272634 5:-77584624 MsG0580028270.01.T01:CDS
AAATGTATTCCCTCGTAATA+TGG 0.279291 5:-77583021 MsG0580028270.01.T01:CDS
GGCATAAGCCGCCTCTTCTT+TGG 0.294099 5:+77580071 None:intergenic
AGTTGGTGGTAACTTCAATT+TGG 0.294760 5:-77583308 MsG0580028270.01.T01:CDS
ACAGCATCTGGATCCCCTTT+TGG 0.297980 5:+77582795 None:intergenic
TCCCATGAGTTTCTCAGTTT+CGG 0.301177 5:-77584553 MsG0580028270.01.T01:intron
GGCGAAGTGGTTAATATTAC+TGG 0.304112 5:-77581978 MsG0580028270.01.T01:intron
TTGCAGGAGTCTCTAACTTT+TGG 0.306195 5:-77584243 MsG0580028270.01.T01:intron
GTGTCATTGATGTATGTATT+TGG 0.314227 5:+77582738 None:intergenic
GTCAGCGTCATTTATTCAAC+TGG 0.321418 5:-77580673 MsG0580028270.01.T01:CDS
TACTTCTAATATGGTTCTTA+AGG 0.325007 5:-77580597 MsG0580028270.01.T01:CDS
TGGGAACTTCACTAAGATAT+TGG 0.330299 5:-77580550 MsG0580028270.01.T01:CDS
AATCATTTGTTCAACAGAAT+TGG 0.333715 5:-77580698 MsG0580028270.01.T01:CDS
ACTTACAAAGTTGGAACAAT+TGG 0.340942 5:+77581212 None:intergenic
TGGCATTAATTCATCCAGTT+TGG 0.343326 5:-77583060 MsG0580028270.01.T01:CDS
GAGGCATCGACTTCCCATTC+TGG 0.349420 5:-77580854 MsG0580028270.01.T01:CDS
CTTCAATTTGGAGACCGATA+TGG 0.349540 5:-77583296 MsG0580028270.01.T01:CDS
GTCAGTGTCATTTATTCAAC+GGG 0.350712 5:-77580877 MsG0580028270.01.T01:CDS
CACAAACTTGTCTATCCAAA+AGG 0.356318 5:-77582810 MsG0580028270.01.T01:CDS
GTTTGCAAATTATCAGTTGC+AGG 0.359014 5:-77584259 MsG0580028270.01.T01:CDS
GCTACCATGTATATTGCATA+TGG 0.361060 5:-77581847 MsG0580028270.01.T01:CDS
GAGGCATCGACTTCCCATTC+TGG 0.375007 5:-77580650 MsG0580028270.01.T01:CDS
TAGAGTTGGTGTCCCTTGAT+AGG 0.376140 5:+77580196 None:intergenic
ATGGAAACATTTCTATTCCT+TGG 0.379547 5:+77580627 None:intergenic
ATGGAAACATTTCTATTCCT+TGG 0.379547 5:+77580831 None:intergenic
ACAGTTATTTGTCTGAAGAA+TGG 0.383303 5:-77581648 MsG0580028270.01.T01:intron
ATTTGAAGAGGCAGTATCAT+TGG 0.385582 5:+77584582 None:intergenic
TGCAATATCAGACTCCAAAC+TGG 0.388848 5:+77583046 None:intergenic
TTACTTAGCGTAACAGCATC+TGG 0.392707 5:+77582783 None:intergenic
TTAGCAAGACATACCCTAAC+CGG 0.411016 5:+77581559 None:intergenic
TCTATCCAGGGACATCATAA+TGG 0.411647 5:-77581822 MsG0580028270.01.T01:CDS
ATATGCACTTTCTCCCGGTT+AGG 0.419067 5:-77581573 MsG0580028270.01.T01:CDS
TGCTGGTTATCACCATCGTC+AGG 0.422984 5:+77580935 None:intergenic
CAGAATATATTGACAACAAC+AGG 0.426234 5:-77580907 MsG0580028270.01.T01:CDS
CCGGGAGAAAGTGCATATTC+AGG 0.428955 5:+77581578 None:intergenic
TTCTATTCCTTGGCCAGAAT+GGG 0.429436 5:+77580637 None:intergenic
TTCTATTCCTTGGCCAGAAT+GGG 0.429436 5:+77580841 None:intergenic
TTTCTATTCCTTGGCCAGAA+TGG 0.429928 5:+77580636 None:intergenic
TTTCTATTCCTTGGCCAGAA+TGG 0.429928 5:+77580840 None:intergenic
AAACCCTAGAAGGAGGAAAC+TGG 0.431986 5:+77584620 None:intergenic
GAACCAGTTTCCTCCTTCTA+GGG 0.435655 5:-77584623 MsG0580028270.01.T01:CDS
TATGCACTTTCTCCCGGTTA+GGG 0.445721 5:-77581572 MsG0580028270.01.T01:intron
GAGAGGAAGAAGGATACATA+TGG 0.448774 5:-77581622 MsG0580028270.01.T01:CDS
GGAGACCGATATGGATACAT+TGG 0.460532 5:-77583287 MsG0580028270.01.T01:CDS
ACAAACTTGTCTATCCAAAA+GGG 0.462924 5:-77582809 MsG0580028270.01.T01:CDS
TACAGATACTATCAATTATC+CGG 0.463537 5:-77580294 MsG0580028270.01.T01:CDS
ATGATCGCTGGTCAAAAGAT+TGG 0.463716 5:+77580465 None:intergenic
ATGATCGCTGGTCAAAAGAT+TGG 0.463716 5:+77580732 None:intergenic
TTAATAGTGATTTGTTATCC+TGG 0.465013 5:-77581999 MsG0580028270.01.T01:CDS
GCCTCCTTGGGTGGAAGTCA+TGG 0.466713 5:-77580051 MsG0580028270.01.T01:CDS
GCCATGTTGGCAGACATCAC+TGG 0.466901 5:-77582025 MsG0580028270.01.T01:intron
ATGAAAACCACTTACAAAGT+TGG 0.471176 5:+77581203 None:intergenic
CCTGAATATGCACTTTCTCC+CGG 0.471824 5:-77581578 MsG0580028270.01.T01:CDS
ATTGCATATGGATTCTATCC+AGG 0.473057 5:-77581835 MsG0580028270.01.T01:CDS
GACCAGGTCATTGATGTTGA+TGG 0.473407 5:-77583331 MsG0580028270.01.T01:CDS
TTTGAACCGGGAGTTACATT+GGG 0.477285 5:-77580569 MsG0580028270.01.T01:CDS
GTCTTGAACTGTTGAACAAA+TGG 0.477731 5:+77580429 None:intergenic
GGATAGACAAGTTTGTGAAA+AGG 0.479008 5:+77582816 None:intergenic
TTTGAACCAGGAGCTGCATC+GGG 0.479516 5:-77580773 MsG0580028270.01.T01:CDS
GAGGCGGCTTATGCCTCCTT+GGG 0.479991 5:-77580063 MsG0580028270.01.T01:CDS
AGAGGCGGCTTATGCCTCCT+TGG 0.483316 5:-77580064 MsG0580028270.01.T01:CDS
ATGATCGCTGGTCAAAAGAT+TGG 0.484761 5:+77580336 None:intergenic
GCAGATTTGCCGTCACAAGC+AGG 0.487338 5:+77582196 None:intergenic
AATAATCTGAACATCATGAT+TGG 0.487846 5:+77580130 None:intergenic
GTTACTTACTTGAAGTTCAC+GGG 0.490082 5:+77582109 None:intergenic
ATAAGCCGCCTCTTCTTTGG+AGG 0.492336 5:+77580074 None:intergenic
TATCCACACTTATCCTATCA+AGG 0.492566 5:-77580209 MsG0580028270.01.T01:CDS
CATTTGTTCAACAGAATTGG+TGG 0.492953 5:-77580695 MsG0580028270.01.T01:CDS
GAGACCGATATGGATACATT+GGG 0.494126 5:-77583286 MsG0580028270.01.T01:CDS
CACTCGAATATGATGAGTAC+TGG 0.495135 5:-77580245 MsG0580028270.01.T01:CDS
ATATCAATGAGAGGATCAAC+CGG 0.495203 5:+77580275 None:intergenic
GTCATTGATGTTGATGGAGT+TGG 0.498894 5:-77583325 MsG0580028270.01.T01:CDS
TAAGTTAATATTTGAACTCG+TGG 0.499011 5:-77580987 MsG0580028270.01.T01:CDS
CAATATATTCTGAGCAGTGC+TGG 0.499295 5:+77580918 None:intergenic
GAAGTTCCCGATGCAGCTCC+TGG 0.503134 5:+77580767 None:intergenic
TGGAAGTAGCTTGTTAGTCT+AGG 0.503469 5:+77582972 None:intergenic
CTCAGAGGGTTAAAATCAGA+TGG 0.514888 5:+77581240 None:intergenic
TGAGTACTGGCAACAAGAAT+CGG 0.517087 5:-77580232 MsG0580028270.01.T01:CDS
AGTTACTTACTTGAAGTTCA+CGG 0.517194 5:+77582108 None:intergenic
TGTGGACTGGTTTCCACCTA+CGG 0.519375 5:-77581038 MsG0580028270.01.T01:CDS
TCAGACCATTATGATGTCCC+TGG 0.520752 5:+77581817 None:intergenic
GCTTCCCAATGTATCCATAT+CGG 0.521405 5:+77583282 None:intergenic
AAGAGGCAGTATCATTGGAA+TGG 0.524130 5:+77584587 None:intergenic
GAAAACCATGGTTCACATGA+AGG 0.530457 5:-77580965 MsG0580028270.01.T01:CDS
ATCTTCGTTACAGTCAAGTC+AGG 0.533835 5:-77583191 MsG0580028270.01.T01:intron
ATTGACAACAACAGGATTGG+TGG 0.535711 5:-77580899 MsG0580028270.01.T01:CDS
TCCTTGACAGGTACCACAGC+AGG 0.535734 5:-77581325 MsG0580028270.01.T01:intron
TACCGAAACTGAGAAACTCA+TGG 0.541502 5:+77584551 None:intergenic
ACATGATGCATTTGTAGAGT+TGG 0.541673 5:+77580182 None:intergenic
TAACATACAAGAGAAGCAAA+AGG 0.542537 5:-77582284 MsG0580028270.01.T01:CDS
TATATTGACAACAACAGGAT+TGG 0.544673 5:-77580902 MsG0580028270.01.T01:CDS
TCGACTTCCCATTCTGGCCA+AGG 0.544905 5:-77580644 MsG0580028270.01.T01:CDS
TCGACTTCCCATTCTGGCCA+AGG 0.544905 5:-77580848 MsG0580028270.01.T01:CDS
AACAATTGGTTAGTCTCAGA+GGG 0.546055 5:+77581226 None:intergenic
TTGCATATGGATTCTATCCA+GGG 0.549060 5:-77581834 MsG0580028270.01.T01:CDS
ACCGAAACTGAGAAACTCAT+GGG 0.552514 5:+77584552 None:intergenic
GGTCAGTGTCATTTATTCAA+CGG 0.553002 5:-77580878 MsG0580028270.01.T01:CDS
TGTCTGAAGAATGGAAAGAG+AGG 0.554930 5:-77581639 MsG0580028270.01.T01:CDS
TCATTATCTAGAGCTCTTCG+TGG 0.558865 5:-77581271 MsG0580028270.01.T01:CDS
ATGATCGCTGGTCAAAAGAC+TGG 0.559134 5:+77580402 None:intergenic
TTTGCCGTCACAAGCAGGGT+GGG 0.560307 5:+77582201 None:intergenic
ATTGATGTTGATGGAGTTGG+TGG 0.561060 5:-77583322 MsG0580028270.01.T01:CDS
CGAGTTCAAATATTAACTTA+CGG 0.562154 5:+77580990 None:intergenic
CAGGAAAACTCATTTGATTG+TGG 0.562524 5:-77581306 MsG0580028270.01.T01:CDS
ATATTAGAAGTATTGTAAGA+TGG 0.568436 5:+77580608 None:intergenic
ATATTAGAAGTATTGTAAGA+TGG 0.568436 5:+77580812 None:intergenic
GCGGCTTATGCCTCCTTGGG+TGG 0.569687 5:-77580060 MsG0580028270.01.T01:CDS
GAAGTTCCCAATGTAACTCC+CGG 0.570166 5:+77580563 None:intergenic
CTCCATCAACATCAATGACC+TGG 0.572366 5:+77583329 None:intergenic
TCATATGAAGTAATGATCGC+TGG 0.576334 5:+77580324 None:intergenic
ATTCCCTCGTAATATGGATG+TGG 0.583200 5:-77583015 MsG0580028270.01.T01:CDS
GTCTGAAAGACCTTGTGCAA+AGG 0.583698 5:-77581800 MsG0580028270.01.T01:intron
CAGATTTGCCGTCACAAGCA+GGG 0.584422 5:+77582197 None:intergenic
TTGCCGTCACAAGCAGGGTG+GGG 0.584793 5:+77582202 None:intergenic
GTAATATTAACCACTTCGCC+AGG 0.586130 5:+77581981 None:intergenic
AGGAGGAAACTGGTTCATCA+TGG 0.593600 5:+77584630 None:intergenic
GCATATTTCAGACAAAGAGC+CGG 0.603949 5:-77581883 MsG0580028270.01.T01:intron
TCAAAAGATTGGCAATGCCT+CGG 0.609079 5:+77580743 None:intergenic
CCTTCCACATCCATATTACG+AGG 0.611135 5:+77583011 None:intergenic
GCTGGTTATCACCATCGTCA+GGG 0.613048 5:+77580936 None:intergenic
CCTCGTAATATGGATGTGGA+AGG 0.615697 5:-77583011 MsG0580028270.01.T01:CDS
AGAATGGAAAGAGAGGAAGA+AGG 0.616079 5:-77581632 MsG0580028270.01.T01:CDS
ATGATAGACCTCCAAAGAAG+AGG 0.617729 5:-77580082 MsG0580028270.01.T01:CDS
GAACAATTGGTTAGTCTCAG+AGG 0.620039 5:+77581225 None:intergenic
GAATCCATATGCAATATACA+TGG 0.622872 5:+77581843 None:intergenic
TTTGAACTCGTGGAAAACCA+TGG 0.624733 5:-77580977 MsG0580028270.01.T01:CDS
AAGAGCCGGAAAAGTCACTT+AGG 0.625998 5:-77581869 MsG0580028270.01.T01:CDS
TACAAGAGAAGCAAAAGGCT+AGG 0.626260 5:-77582279 MsG0580028270.01.T01:CDS
ATCCACACTTATCCTATCAA+GGG 0.628418 5:-77580208 MsG0580028270.01.T01:CDS
TTGAGATAAGCATCCGTAGG+TGG 0.629538 5:+77581025 None:intergenic
TCAGCGTCATTTATTCAACT+GGG 0.630880 5:-77580672 MsG0580028270.01.T01:CDS
AAAAGCCTTCATGTGAACCA+TGG 0.631459 5:+77580960 None:intergenic
ATTTGCCGTCACAAGCAGGG+TGG 0.631641 5:+77582200 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+77580390 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+77580516 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+77580720 None:intergenic
CGCTTGAGATAAGCATCCGT+AGG 0.636755 5:+77581022 None:intergenic
GATTCCATGACTTCCACCCA+AGG 0.641718 5:+77580047 None:intergenic
TATTCAGGAATCTTGATGAG+AGG 0.644810 5:+77581593 None:intergenic
GGATAATTGATAGTATCTGT+AGG 0.645588 5:+77580296 None:intergenic
CAAACTTGTCTATCCAAAAG+GGG 0.646120 5:-77582808 MsG0580028270.01.T01:CDS
TAGATGATGATAATGATCGC+TGG 0.647629 5:+77580453 None:intergenic
ACTCCCCACCCTGCTTGTGA+CGG 0.648261 5:-77582205 MsG0580028270.01.T01:CDS
TGTTGAGAAATATCAATGAG+AGG 0.651346 5:+77580266 None:intergenic
CTGGTTATCACCATCGTCAG+GGG 0.651767 5:+77580937 None:intergenic
GATTTGTTATCCTGGCGAAG+TGG 0.654014 5:-77581991 MsG0580028270.01.T01:CDS
ATAGACCTCCAAAGAAGAGG+CGG 0.657575 5:-77580079 MsG0580028270.01.T01:CDS
ATGGGATTGAGAATTTGAAG+AGG 0.659303 5:+77584570 None:intergenic
GTGTCATTTATTCAACGGGG+AGG 0.663555 5:-77580873 MsG0580028270.01.T01:CDS
TAGCAAGACATACCCTAACC+GGG 0.664662 5:+77581560 None:intergenic
CTTCCACATCCATATTACGA+GGG 0.670246 5:+77583012 None:intergenic
GTCCCTTGATAGGATAAGTG+TGG 0.675915 5:+77580206 None:intergenic
GCGTCATTTATTCAACTGGG+AGG 0.685757 5:-77580669 MsG0580028270.01.T01:CDS
TCCATGACTTCCACCCAAGG+AGG 0.703159 5:+77580050 None:intergenic
GCTGTGAAACAAGATACTAG+TGG 0.751401 5:-77583220 MsG0580028270.01.T01:CDS
TCAGTGTCATTTATTCAACG+GGG 0.770393 5:-77580876 MsG0580028270.01.T01:CDS
CTGCATCGGGAACTTCACCG+AGG 0.780143 5:-77580760 MsG0580028270.01.T01:CDS
GTGAAACAAGATACTAGTGG+TGG 0.802443 5:-77583217 MsG0580028270.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAAATAAAAAATTTC+GGG + Chr5:77580483-77580502 None:intergenic 10.0%
!! TTAAGTTATATTATTTCAAT+TGG - Chr5:77583536-77583555 MsG0580028270.01.T01:intron 10.0%
!!! ATTTTTTAAATTTTAAAGGA+TGG - Chr5:77580817-77580836 MsG0580028270.01.T01:CDS 10.0%
!! AAAAAATATTTACAACGTTA+TGG - Chr5:77581734-77581753 MsG0580028270.01.T01:intron 15.0%
!! AATATAAACAAACAGTTATA+TGG - Chr5:77582282-77582301 MsG0580028270.01.T01:CDS 15.0%
!! GAATCATTAAAATAATTGAT+TGG - Chr5:77580986-77581005 MsG0580028270.01.T01:CDS 15.0%
!! TATAATTAACTAAAATCAGA+AGG - Chr5:77581033-77581052 MsG0580028270.01.T01:CDS 15.0%
!! TTAAAAATGACAAATTGATT+TGG + Chr5:77581068-77581087 None:intergenic 15.0%
!!! AAAAATCTTTTTGAAATCAA+TGG + Chr5:77581419-77581438 None:intergenic 15.0%
!!! AAAGTCTTATTTTATCATTT+TGG + Chr5:77582261-77582280 None:intergenic 15.0%
!!! ACTATTTTTATGTTTAAGAT+GGG - Chr5:77580905-77580924 MsG0580028270.01.T01:CDS 15.0%
!!! ATAACATTAATCTTGATTTT+TGG - Chr5:77584565-77584584 MsG0580028270.01.T01:CDS 15.0%
!!! GGGTATTTTTTAAATTTTAA+AGG - Chr5:77580813-77580832 MsG0580028270.01.T01:CDS 15.0%
!!! TACTATTTTTATGTTTAAGA+TGG - Chr5:77580904-77580923 MsG0580028270.01.T01:CDS 15.0%
!! AAAAAACTCAAAAACTAACA+CGG + Chr5:77580518-77580537 None:intergenic 20.0%
!! AATAATCTACTCAAAATTGT+GGG - Chr5:77580793-77580812 MsG0580028270.01.T01:CDS 20.0%
!! ACATTATATCTACTGAAAAA+TGG - Chr5:77582315-77582334 MsG0580028270.01.T01:intron 20.0%
!! ATCTTACAATACTTCTAATA+TGG - Chr5:77583861-77583880 MsG0580028270.01.T01:intron 20.0%
!! CATTATATCTACTGAAAAAT+GGG - Chr5:77582316-77582335 MsG0580028270.01.T01:intron 20.0%
!! CATTTAAATTAAAGAAGAGA+AGG + Chr5:77582938-77582957 None:intergenic 20.0%
!! CTTAAAAAATATATATGGTG+AGG + Chr5:77583521-77583540 None:intergenic 20.0%
!! GTCTACTGTTAATAAAATAA+AGG + Chr5:77582172-77582191 None:intergenic 20.0%
!! TAATAATCTACTCAAAATTG+TGG - Chr5:77580792-77580811 MsG0580028270.01.T01:CDS 20.0%
!! TAGAGATTTAGTTATATTGT+AGG - Chr5:77581551-77581570 MsG0580028270.01.T01:intron 20.0%
!! TCATCATTAAAAGAATCAAT+TGG - Chr5:77580752-77580771 MsG0580028270.01.T01:CDS 20.0%
!! TTAGTAAAAACACAATCAAA+TGG + Chr5:77583311-77583330 None:intergenic 20.0%
!!! AATGTGCATTTATTTTTGTA+TGG + Chr5:77581197-77581216 None:intergenic 20.0%
!!! ATATTAGAAGTATTGTAAGA+TGG + Chr5:77583862-77583881 None:intergenic 20.0%
!!! CTGTTTAAAAATCTCAATTT+TGG - Chr5:77582349-77582368 MsG0580028270.01.T01:intron 20.0%
!!! TATTTTTTTGTACTTACTCT+TGG + Chr5:77581722-77581741 None:intergenic 20.0%
!!! TTGAGTTGAAAAAATTTAAG+AGG - Chr5:77580936-77580955 MsG0580028270.01.T01:CDS 20.0%
! AACATCAGTAAATCAACAAT+AGG + Chr5:77580310-77580329 None:intergenic 25.0%
! AATAATCTGAACATCATGAT+TGG + Chr5:77584544-77584563 None:intergenic 25.0%
! AATCATTTGTTCAACAGAAT+TGG - Chr5:77583973-77583992 MsG0580028270.01.T01:intron 25.0%
! AGAAAAATTCAACATATGTC+AGG + Chr5:77583606-77583625 None:intergenic 25.0%
! CAAAACACAAAAAAATCACA+AGG + Chr5:77580230-77580249 None:intergenic 25.0%
! CGAGTTCAAATATTAACTTA+CGG + Chr5:77583684-77583703 None:intergenic 25.0%
! GATTATAATTTATAACCACG+TGG - Chr5:77582224-77582243 MsG0580028270.01.T01:CDS 25.0%
! GCTATAAAGATTCAAATAAG+AGG - Chr5:77580689-77580708 MsG0580028270.01.T01:CDS 25.0%
! TAACAAAGTGATGAACAAAA+TGG + Chr5:77582041-77582060 None:intergenic 25.0%
! TAAGTTAATATTTGAACTCG+TGG - Chr5:77583684-77583703 MsG0580028270.01.T01:intron 25.0%
! TACAGATACTATCAATTATC+CGG - Chr5:77584377-77584396 MsG0580028270.01.T01:intron 25.0%
! TACTTCTAATATGGTTCTTA+AGG - Chr5:77583870-77583889 MsG0580028270.01.T01:intron 25.0%
! TATAACTAAATCTCTACCTT+AGG + Chr5:77581547-77581566 None:intergenic 25.0%
! TCAAACTGAAATCTTCAATT+AGG + Chr5:77581095-77581114 None:intergenic 25.0%
! TGTCAATGTAACATTAGATT+TGG - Chr5:77580865-77580884 MsG0580028270.01.T01:CDS 25.0%
!! AATATTGTTATTGTGAACCT+TGG - Chr5:77582108-77582127 MsG0580028270.01.T01:intron 25.0%
!! ATGATCAATGTTTTCAATCA+TGG - Chr5:77580348-77580367 MsG0580028270.01.T01:CDS 25.0%
!! CAAAAAGATTTTTGATGAGT+TGG - Chr5:77581426-77581445 MsG0580028270.01.T01:intron 25.0%
!! TTATACAGAGTTCTCTTTTT+GGG - Chr5:77581757-77581776 MsG0580028270.01.T01:intron 25.0%
!! TTCTGATTGGAATTCAATTT+TGG - Chr5:77582624-77582643 MsG0580028270.01.T01:intron 25.0%
!!! AAAAATTTAAGAGGAGTGTT+TGG - Chr5:77580945-77580964 MsG0580028270.01.T01:CDS 25.0%
!!! TCTGAGTTGATAAAATTGAA+TGG - Chr5:77580642-77580661 MsG0580028270.01.T01:CDS 25.0%
!!! TTAATAGTGATTTGTTATCC+TGG - Chr5:77582672-77582691 MsG0580028270.01.T01:intron 25.0%
AAAATGAAAACATTGTGTGG+TGG - Chr5:77581793-77581812 MsG0580028270.01.T01:intron 30.0%
AAATCAACAATAGGATCATC+AGG + Chr5:77580301-77580320 None:intergenic 30.0%
AAATGTATTCCCTCGTAATA+TGG - Chr5:77581650-77581669 MsG0580028270.01.T01:intron 30.0%
AATTGTTCCAACTTTGTAAG+TGG - Chr5:77583461-77583480 MsG0580028270.01.T01:intron 30.0%
ACAAACTTGTCTATCCAAAA+GGG - Chr5:77581862-77581881 MsG0580028270.01.T01:CDS 30.0%
ACAAAGTTTAGGCCAAATAA+CGG + Chr5:77583226-77583245 None:intergenic 30.0%
ACAGTTATTTGTCTGAAGAA+TGG - Chr5:77583023-77583042 MsG0580028270.01.T01:CDS 30.0%
ACTTACAAAGTTGGAACAAT+TGG + Chr5:77583462-77583481 None:intergenic 30.0%
AGAAATGAATTAGTGACTAG+TGG - Chr5:77581117-77581136 MsG0580028270.01.T01:intron 30.0%
AGAGAAGGAAATTTAATGCA+TGG + Chr5:77582923-77582942 None:intergenic 30.0%
AGGTATATTATGTCCCTTTA+GGG - Chr5:77581500-77581519 MsG0580028270.01.T01:intron 30.0%
AGTTACTTACTTGAAGTTCA+CGG + Chr5:77582566-77582585 None:intergenic 30.0%
ATGAAAACCACTTACAAAGT+TGG + Chr5:77583471-77583490 None:intergenic 30.0%
ATGATTCCAAATACAATGCT+AGG + Chr5:77580736-77580755 None:intergenic 30.0%
ATGGAAACATTTCTATTCCT+TGG + Chr5:77583843-77583862 None:intergenic 30.0%
ATGGTGAGGAACAAAATAAT+TGG + Chr5:77583507-77583526 None:intergenic 30.0%
ATTTGTGAGTTTACATCCTA+AGG - Chr5:77581528-77581547 MsG0580028270.01.T01:intron 30.0%
CAGAATATATTGACAACAAC+AGG - Chr5:77583764-77583783 MsG0580028270.01.T01:intron 30.0%
CATTTCAACATGTTCGTAAA+TGG - Chr5:77582497-77582516 MsG0580028270.01.T01:intron 30.0%
CTAGATAATGAAGCAAAAAG+AGG + Chr5:77583391-77583410 None:intergenic 30.0%
GAATCAATTGGAATTTGATG+TGG - Chr5:77580764-77580783 MsG0580028270.01.T01:CDS 30.0%
GAATCCATATGCAATATACA+TGG + Chr5:77582831-77582850 None:intergenic 30.0%
GATTCATATGGTTGCTTATA+TGG - Chr5:77583574-77583593 MsG0580028270.01.T01:intron 30.0%
GGTTCATATCTTTCAACTTA+TGG - Chr5:77581138-77581157 MsG0580028270.01.T01:intron 30.0%
TAACATACAAGAGAAGCAAA+AGG - Chr5:77582387-77582406 MsG0580028270.01.T01:intron 30.0%
TAACTGTCAATTTCAGAAGA+TGG + Chr5:77583010-77583029 None:intergenic 30.0%
TATAATTTATAACCACGTGG+TGG - Chr5:77582227-77582246 MsG0580028270.01.T01:CDS 30.0%
TATATAACTCACCGACAAAA+TGG + Chr5:77582982-77583001 None:intergenic 30.0%
TATATTGACAACAACAGGAT+TGG - Chr5:77583769-77583788 MsG0580028270.01.T01:intron 30.0%
TCCAAAATGAAAACATTGTG+TGG - Chr5:77581790-77581809 MsG0580028270.01.T01:intron 30.0%
TGATTCCAAATACAATGCTA+GGG + Chr5:77580735-77580754 None:intergenic 30.0%
TGTTGAGAAATATCAATGAG+AGG + Chr5:77584408-77584427 None:intergenic 30.0%
TTCAAAAAGCGACAAAGTTT+AGG + Chr5:77583237-77583256 None:intergenic 30.0%
! AACTTTGTAAGTGGTTTTCA+TGG - Chr5:77583470-77583489 MsG0580028270.01.T01:intron 30.0%
! ACCACACAATGTTTTCATTT+TGG + Chr5:77581794-77581813 None:intergenic 30.0%
! ATCTGTATTGATGTTCTGAT+TGG - Chr5:77582611-77582630 MsG0580028270.01.T01:intron 30.0%
! GGATAATTGATAGTATCTGT+AGG + Chr5:77584378-77584397 None:intergenic 30.0%
! GTGTCATTGATGTATGTATT+TGG + Chr5:77581936-77581955 None:intergenic 30.0%
! GTTATACAGAGTTCTCTTTT+TGG - Chr5:77581756-77581775 MsG0580028270.01.T01:intron 30.0%
! TATGTCATTCTTTTTGCAGA+CGG - Chr5:77581581-77581600 MsG0580028270.01.T01:CDS 30.0%
!!! CAAGCACACATTTTTTTTCA+AGG + Chr5:77580670-77580689 None:intergenic 30.0%
!!! TAGTTTTTTCTTTCGAAAGC+TGG - Chr5:77582429-77582448 MsG0580028270.01.T01:intron 30.0%
!!! TGAATTTTTCTAGCTCAATG+TGG - Chr5:77583615-77583634 MsG0580028270.01.T01:intron 30.0%
AAACTCAACTAATCATCAGC+CGG + Chr5:77583278-77583297 None:intergenic 35.0%
AAGCAACCATATGAATCACT+AGG + Chr5:77583571-77583590 None:intergenic 35.0%
ACAAAATGGAGCACAAATAC+AGG + Chr5:77582027-77582046 None:intergenic 35.0%
ACATGATGCATTTGTAGAGT+TGG + Chr5:77584492-77584511 None:intergenic 35.0%
ACATTGACATCTCTTGCTTA+GGG + Chr5:77580854-77580873 None:intergenic 35.0%
AGAGATTCAAAAACCCTAGA+AGG + Chr5:77580064-77580083 None:intergenic 35.0%
AGCAACCATATGAATCACTA+GGG + Chr5:77583570-77583589 None:intergenic 35.0%
ATATCAATGAGAGGATCAAC+CGG + Chr5:77584399-77584418 None:intergenic 35.0%
ATCCACACTTATCCTATCAA+GGG - Chr5:77584463-77584482 MsG0580028270.01.T01:intron 35.0%
ATGGGATTGAGAATTTGAAG+AGG + Chr5:77580104-77580123 None:intergenic 35.0%
ATTGCATATGGATTCTATCC+AGG - Chr5:77582836-77582855 MsG0580028270.01.T01:intron 35.0%
ATTTGAAGAGGCAGTATCAT+TGG + Chr5:77580092-77580111 None:intergenic 35.0%
CAAACTTGTCTATCCAAAAG+GGG - Chr5:77581863-77581882 MsG0580028270.01.T01:CDS 35.0%
CAAAGTTTAGGCCAAATAAC+GGG + Chr5:77583225-77583244 None:intergenic 35.0%
CACAAACTTGTCTATCCAAA+AGG - Chr5:77581861-77581880 MsG0580028270.01.T01:CDS 35.0%
CAGGAAAACTCATTTGATTG+TGG - Chr5:77583365-77583384 MsG0580028270.01.T01:intron 35.0%
CAGGTATATTATGTCCCTTT+AGG - Chr5:77581499-77581518 MsG0580028270.01.T01:intron 35.0%
CATTTGTTCAACAGAATTGG+TGG - Chr5:77583976-77583995 MsG0580028270.01.T01:intron 35.0%
CCTCGACAATAAAAATCAAG+AGG + Chr5:77581239-77581258 None:intergenic 35.0%
CTCAAAAATACCTTTGCACA+AGG + Chr5:77582884-77582903 None:intergenic 35.0%
GAGAAAAGATGAATGTTCCA+AGG + Chr5:77582128-77582147 None:intergenic 35.0%
GCTACCATGTATATTGCATA+TGG - Chr5:77582824-77582843 MsG0580028270.01.T01:CDS 35.0%
GGATAGACAAGTTTGTGAAA+AGG + Chr5:77581858-77581877 None:intergenic 35.0%
GTCTTGAACTGTTGAACAAA+TGG + Chr5:77584182-77584201 None:intergenic 35.0%
GTTACTTACTTGAAGTTCAC+GGG + Chr5:77582565-77582584 None:intergenic 35.0%
GTTTGCAAATTATCAGTTGC+AGG - Chr5:77580412-77580431 MsG0580028270.01.T01:CDS 35.0%
TAACTCCCTAGTGATTCATA+TGG - Chr5:77583562-77583581 MsG0580028270.01.T01:intron 35.0%
TACATTGACATCTCTTGCTT+AGG + Chr5:77580855-77580874 None:intergenic 35.0%
TATCCACACTTATCCTATCA+AGG - Chr5:77584462-77584481 MsG0580028270.01.T01:intron 35.0%
TATTCAGGAATCTTGATGAG+AGG + Chr5:77583081-77583100 None:intergenic 35.0%
TCACAAATTGAGACCCTAAA+GGG + Chr5:77581516-77581535 None:intergenic 35.0%
TCAGCGTCATTTATTCAACT+GGG - Chr5:77583999-77584018 MsG0580028270.01.T01:intron 35.0%
TCATATGAAGTAATGATCGC+TGG + Chr5:77584350-77584369 None:intergenic 35.0%
TGAAACCCTAGCATTGTATT+TGG - Chr5:77580727-77580746 MsG0580028270.01.T01:CDS 35.0%
TGGCATTAATTCATCCAGTT+TGG - Chr5:77581611-77581630 MsG0580028270.01.T01:CDS 35.0%
TGGGAACTTCACTAAGATAT+TGG - Chr5:77584121-77584140 MsG0580028270.01.T01:intron 35.0%
TTGCATATGGATTCTATCCA+GGG - Chr5:77582837-77582856 MsG0580028270.01.T01:intron 35.0%
! ATTACTTCGCTCCATTTTGT+CGG - Chr5:77582968-77582987 MsG0580028270.01.T01:intron 35.0%
! ATTTATTTCTCGCCTATCTC+CGG - Chr5:77583256-77583275 MsG0580028270.01.T01:CDS 35.0%
! CCTCTTGATTTTTATTGTCG+AGG - Chr5:77581236-77581255 MsG0580028270.01.T01:CDS 35.0%
! GAATTTGAAGTACTAGAACG+TGG + Chr5:77581293-77581312 None:intergenic 35.0%
! TAGATGATGATAATGATCGC+TGG + Chr5:77583954-77583973 None:intergenic 35.0%
! TCAATGTTTTCAATCATGGC+TGG - Chr5:77580352-77580371 MsG0580028270.01.T01:CDS 35.0%
! TTTTTGCAAGTCCCGTTATT+TGG - Chr5:77583211-77583230 MsG0580028270.01.T01:CDS 35.0%
!! AACAATTGGTTAGTCTCAGA+GGG + Chr5:77583448-77583467 None:intergenic 35.0%
!! AGTTGGTGGTAACTTCAATT+TGG - Chr5:77581363-77581382 MsG0580028270.01.T01:intron 35.0%
!! GAATTCAATTTTGGCCATGT+TGG - Chr5:77582633-77582652 MsG0580028270.01.T01:intron 35.0%
!! GGTCAGTGTCATTTATTCAA+CGG - Chr5:77583793-77583812 MsG0580028270.01.T01:intron 35.0%
!! GTCAGTGTCATTTATTCAAC+GGG - Chr5:77583794-77583813 MsG0580028270.01.T01:intron 35.0%
!! TCAGTGTCATTTATTCAACG+GGG - Chr5:77583795-77583814 MsG0580028270.01.T01:intron 35.0%
!! TCATGTCTGAAACAGTTTTC+AGG - Chr5:77581830-77581849 MsG0580028270.01.T01:CDS 35.0%
!!! TCTTAAGGAGCATTTTGAAC+CGG - Chr5:77584089-77584108 MsG0580028270.01.T01:intron 35.0%
AAAAGCCTTCATGTGAACCA+TGG + Chr5:77583714-77583733 None:intergenic 40.0%
AAGAGGCAGTATCATTGGAA+TGG + Chr5:77580087-77580106 None:intergenic 40.0%
ACCGAAACTGAGAAACTCAT+GGG + Chr5:77580122-77580141 None:intergenic 40.0%
AGAATGGAAAGAGAGGAAGA+AGG - Chr5:77583039-77583058 MsG0580028270.01.T01:CDS 40.0%
ATCTTCGTTACAGTCAAGTC+AGG - Chr5:77581480-77581499 MsG0580028270.01.T01:intron 40.0%
ATGATAGACCTCCAAAGAAG+AGG - Chr5:77584589-77584608 MsG0580028270.01.T01:CDS 40.0%
ATGATCGCTGGTCAAAAGAT+TGG + Chr5:77583942-77583961 None:intergenic 40.0%
ATTCCCTCGTAATATGGATG+TGG - Chr5:77581656-77581675 MsG0580028270.01.T01:intron 40.0%
ATTGACAACAACAGGATTGG+TGG - Chr5:77583772-77583791 MsG0580028270.01.T01:intron 40.0%
CAATATATTCTGAGCAGTGC+TGG + Chr5:77583756-77583775 None:intergenic 40.0%
CACTCGAATATGATGAGTAC+TGG - Chr5:77584426-77584445 MsG0580028270.01.T01:intron 40.0%
CTCACAAATTGAGACCCTAA+AGG + Chr5:77581517-77581536 None:intergenic 40.0%
CTCAGAGGGTTAAAATCAGA+TGG + Chr5:77583434-77583453 None:intergenic 40.0%
CTTCAATTTGGAGACCGATA+TGG - Chr5:77581375-77581394 MsG0580028270.01.T01:intron 40.0%
CTTCCACATCCATATTACGA+GGG + Chr5:77581662-77581681 None:intergenic 40.0%
GAAAACCATGGTTCACATGA+AGG - Chr5:77583706-77583725 MsG0580028270.01.T01:intron 40.0%
GAGACCGATATGGATACATT+GGG - Chr5:77581385-77581404 MsG0580028270.01.T01:intron 40.0%
GAGAGGAAGAAGGATACATA+TGG - Chr5:77583049-77583068 MsG0580028270.01.T01:CDS 40.0%
GATTCAAAAACCCTAGAAGG+AGG + Chr5:77580061-77580080 None:intergenic 40.0%
GCATATTTCAGACAAAGAGC+CGG - Chr5:77582788-77582807 MsG0580028270.01.T01:CDS 40.0%
GCTGTGAAACAAGATACTAG+TGG - Chr5:77581451-77581470 MsG0580028270.01.T01:intron 40.0%
GCTTCCCAATGTATCCATAT+CGG + Chr5:77581392-77581411 None:intergenic 40.0%
GGCGAAGTGGTTAATATTAC+TGG - Chr5:77582693-77582712 MsG0580028270.01.T01:intron 40.0%
GTAATATTAACCACTTCGCC+AGG + Chr5:77582693-77582712 None:intergenic 40.0%
GTCAGCGTCATTTATTCAAC+TGG - Chr5:77583998-77584017 MsG0580028270.01.T01:intron 40.0%
GTGAAACAAGATACTAGTGG+TGG - Chr5:77581454-77581473 MsG0580028270.01.T01:intron 40.0%
TACAAGAGAAGCAAAAGGCT+AGG - Chr5:77582392-77582411 MsG0580028270.01.T01:intron 40.0%
TACCGAAACTGAGAAACTCA+TGG + Chr5:77580123-77580142 None:intergenic 40.0%
TCAAAAGATTGGCAATGCCT+CGG + Chr5:77583931-77583950 None:intergenic 40.0%
TCCCATGAGTTTCTCAGTTT+CGG - Chr5:77580118-77580137 MsG0580028270.01.T01:CDS 40.0%
TCTATCCAGGGACATCATAA+TGG - Chr5:77582849-77582868 MsG0580028270.01.T01:intron 40.0%
TGCAATATCAGACTCCAAAC+TGG + Chr5:77581628-77581647 None:intergenic 40.0%
TGTCTGAAGAATGGAAAGAG+AGG - Chr5:77583032-77583051 MsG0580028270.01.T01:CDS 40.0%
TGTGATTGAATGTCCTTGAC+AGG - Chr5:77583334-77583353 MsG0580028270.01.T01:intron 40.0%
TTACTTAGCGTAACAGCATC+TGG + Chr5:77581891-77581910 None:intergenic 40.0%
TTAGCAAGACATACCCTAAC+CGG + Chr5:77583115-77583134 None:intergenic 40.0%
TTCTATTCCTTGGCCAGAAT+GGG + Chr5:77583833-77583852 None:intergenic 40.0%
TTTCTATTCCTTGGCCAGAA+TGG + Chr5:77583834-77583853 None:intergenic 40.0%
TTTGAACCGGGAGTTACATT+GGG - Chr5:77584102-77584121 MsG0580028270.01.T01:intron 40.0%
TTTGAACTCGTGGAAAACCA+TGG - Chr5:77583694-77583713 MsG0580028270.01.T01:intron 40.0%
! ATTGATGTTGATGGAGTTGG+TGG - Chr5:77581349-77581368 MsG0580028270.01.T01:intron 40.0%
! CTTAAGCAGCATTTTGAACC+AGG - Chr5:77583886-77583905 MsG0580028270.01.T01:intron 40.0%
! GTCATTGATGTTGATGGAGT+TGG - Chr5:77581346-77581365 MsG0580028270.01.T01:intron 40.0%
! TCAAATGAGTTTTCCTGCTG+TGG + Chr5:77583362-77583381 None:intergenic 40.0%
! TCATTATCTAGAGCTCTTCG+TGG - Chr5:77583400-77583419 MsG0580028270.01.T01:intron 40.0%
! TTGCAGGAGTCTCTAACTTT+TGG - Chr5:77580428-77580447 MsG0580028270.01.T01:CDS 40.0%
! TTTTGAACCGGGAGTTACAT+TGG - Chr5:77584101-77584120 MsG0580028270.01.T01:intron 40.0%
! TTTTTGCAGACGGAATCAGT+TGG - Chr5:77581591-77581610 MsG0580028270.01.T01:CDS 40.0%
!! GAACAATTGGTTAGTCTCAG+AGG + Chr5:77583449-77583468 None:intergenic 40.0%
!! TGAGTACTGGCAACAAGAAT+CGG - Chr5:77584439-77584458 MsG0580028270.01.T01:intron 40.0%
!! TGGAAGTAGCTTGTTAGTCT+AGG + Chr5:77581702-77581721 None:intergenic 40.0%
!! TTGGAATCAGAAGGAGTGTT+TGG - Chr5:77580964-77580983 MsG0580028270.01.T01:CDS 40.0%
!!! CTTAAGGAGCATTTTGAACC+GGG - Chr5:77584090-77584109 MsG0580028270.01.T01:intron 40.0%
!!! TTTTCTAGCTCAATGTGGAC+TGG - Chr5:77583620-77583639 MsG0580028270.01.T01:intron 40.0%
AAACCCTAGAAGGAGGAAAC+TGG + Chr5:77580054-77580073 None:intergenic 45.0%
AAGAGCCGGAAAAGTCACTT+AGG - Chr5:77582802-77582821 MsG0580028270.01.T01:CDS 45.0%
ACTAATCATCAGCCGGAGAT+AGG + Chr5:77583271-77583290 None:intergenic 45.0%
ATAGACCTCCAAAGAAGAGG+CGG - Chr5:77584592-77584611 MsG0580028270.01.T01:CDS 45.0%
ATATGCACTTTCTCCCGGTT+AGG - Chr5:77583098-77583117 MsG0580028270.01.T01:intron 45.0%
ATGATCGCTGGTCAAAAGAC+TGG + Chr5:77584272-77584291 None:intergenic 45.0%
CATTGTGTGGTGGCTAATTC+TGG - Chr5:77581803-77581822 MsG0580028270.01.T01:CDS 45.0%
CCTCGTAATATGGATGTGGA+AGG - Chr5:77581660-77581679 MsG0580028270.01.T01:intron 45.0%
CCTGAATATGCACTTTCTCC+CGG - Chr5:77583093-77583112 MsG0580028270.01.T01:intron 45.0%
CCTTCCACATCCATATTACG+AGG + Chr5:77581663-77581682 None:intergenic 45.0%
CTCCATCAACATCAATGACC+TGG + Chr5:77581345-77581364 None:intergenic 45.0%
CTTTCGAAAGCTGGCTGATA+TGG - Chr5:77582438-77582457 MsG0580028270.01.T01:intron 45.0%
GAACCAGTTTCCTCCTTCTA+GGG - Chr5:77580048-77580067 MsG0580028270.01.T01:CDS 45.0%
GAAGTTCCCAATGTAACTCC+CGG + Chr5:77584111-77584130 None:intergenic 45.0%
GACCAGGTCATTGATGTTGA+TGG - Chr5:77581340-77581359 MsG0580028270.01.T01:intron 45.0%
GCGTCATTTATTCAACTGGG+AGG - Chr5:77584002-77584021 MsG0580028270.01.T01:intron 45.0%
GGAGACCGATATGGATACAT+TGG - Chr5:77581384-77581403 MsG0580028270.01.T01:intron 45.0%
GTCCCTTGATAGGATAAGTG+TGG + Chr5:77584468-77584487 None:intergenic 45.0%
GTCTGAAAGACCTTGTGCAA+AGG - Chr5:77582871-77582890 MsG0580028270.01.T01:intron 45.0%
TAGCAAGACATACCCTAACC+GGG + Chr5:77583114-77583133 None:intergenic 45.0%
TATGCACTTTCTCCCGGTTA+GGG - Chr5:77583099-77583118 MsG0580028270.01.T01:intron 45.0%
TCAGACCATTATGATGTCCC+TGG + Chr5:77582857-77582876 None:intergenic 45.0%
TGAACCAGTTTCCTCCTTCT+AGG - Chr5:77580047-77580066 MsG0580028270.01.T01:CDS 45.0%
TTGAGATAAGCATCCGTAGG+TGG + Chr5:77583649-77583668 None:intergenic 45.0%
TTGGTTAAGTAACCACCACG+TGG + Chr5:77582242-77582261 None:intergenic 45.0%
! CTTTTCTTGTCATGCAGACC+AGG - Chr5:77581324-77581343 MsG0580028270.01.T01:intron 45.0%
! GGTAGCCTAAGTGACTTTTC+CGG + Chr5:77582810-77582829 None:intergenic 45.0%
! TTTTGAACCAGGAGCTGCAT+CGG - Chr5:77583897-77583916 MsG0580028270.01.T01:intron 45.0%
!! GAGGAGTGTTTGGAATCAGA+AGG - Chr5:77580955-77580974 MsG0580028270.01.T01:CDS 45.0%
!! GATTTGTTATCCTGGCGAAG+TGG - Chr5:77582680-77582699 MsG0580028270.01.T01:intron 45.0%
!! GTGTCATTTATTCAACGGGG+AGG - Chr5:77583798-77583817 MsG0580028270.01.T01:intron 45.0%
!! TAGAGTTGGTGTCCCTTGAT+AGG + Chr5:77584478-77584497 None:intergenic 45.0%
!! AAACAAAAAATAAAAAATTT+CGG + Chr5:77580484-77580503 None:intergenic 5.0%
!! TATAACTTAAAAAATATATA+TGG + Chr5:77583526-77583545 None:intergenic 5.0%
ATAAGCCGCCTCTTCTTTGG+AGG + Chr5:77584600-77584619 None:intergenic 50.0%
CAGATTTGCCGTCACAAGCA+GGG + Chr5:77582477-77582496 None:intergenic 50.0%
CGCTTGAGATAAGCATCCGT+AGG + Chr5:77583652-77583671 None:intergenic 50.0%
CTGGTTATCACCATCGTCAG+GGG + Chr5:77583737-77583756 None:intergenic 50.0%
GATTCCATGACTTCCACCCA+AGG + Chr5:77584627-77584646 None:intergenic 50.0%
GCTGGTTATCACCATCGTCA+GGG + Chr5:77583738-77583757 None:intergenic 50.0%
TCCAGTGATGTCTGCCAACA+TGG + Chr5:77582650-77582669 None:intergenic 50.0%
TTTGAACCAGGAGCTGCATC+GGG - Chr5:77583898-77583917 MsG0580028270.01.T01:intron 50.0%
! ACAGCATCTGGATCCCCTTT+TGG + Chr5:77581879-77581898 None:intergenic 50.0%
! CCGGGAGAAAGTGCATATTC+AGG + Chr5:77583096-77583115 None:intergenic 50.0%
! TGCTGGTTATCACCATCGTC+AGG + Chr5:77583739-77583758 None:intergenic 50.0%
!! TGTGGACTGGTTTCCACCTA+CGG - Chr5:77583633-77583652 MsG0580028270.01.T01:intron 50.0%
ATTTGCCGTCACAAGCAGGG+TGG + Chr5:77582474-77582493 None:intergenic 55.0%
GCAGATTTGCCGTCACAAGC+AGG + Chr5:77582478-77582497 None:intergenic 55.0%
GCCATGTTGGCAGACATCAC+TGG - Chr5:77582646-77582665 MsG0580028270.01.T01:intron 55.0%
GGCATAAGCCGCCTCTTCTT+TGG + Chr5:77584603-77584622 None:intergenic 55.0%
TCCATGACTTCCACCCAAGG+AGG + Chr5:77584624-77584643 None:intergenic 55.0%
TCCTGCTGTGGTACCTGTCA+AGG + Chr5:77583350-77583369 None:intergenic 55.0%
TCCTTGACAGGTACCACAGC+AGG - Chr5:77583346-77583365 MsG0580028270.01.T01:intron 55.0%
TCGACTTCCCATTCTGGCCA+AGG - Chr5:77583823-77583842 MsG0580028270.01.T01:intron 55.0%
TTTGCCGTCACAAGCAGGGT+GGG + Chr5:77582473-77582492 None:intergenic 55.0%
! GAAGGCTTTTCCCCTGACGA+TGG - Chr5:77583724-77583743 MsG0580028270.01.T01:intron 55.0%
!! GAGGCATCGACTTCCCATTC+TGG - Chr5:77583817-77583836 MsG0580028270.01.T01:intron 55.0%
ACTCCCCACCCTGCTTGTGA+CGG - Chr5:77582466-77582485 MsG0580028270.01.T01:intron 60.0%
AGAGGCGGCTTATGCCTCCT+TGG - Chr5:77584607-77584626 MsG0580028270.01.T01:CDS 60.0%
CTGCATCGGGAACTTCACCG+AGG - Chr5:77583911-77583930 MsG0580028270.01.T01:intron 60.0%
GAAGTTCCCGATGCAGCTCC+TGG + Chr5:77583907-77583926 None:intergenic 60.0%
GAGGCGGCTTATGCCTCCTT+GGG - Chr5:77584608-77584627 MsG0580028270.01.T01:CDS 60.0%
GCCTCCTTGGGTGGAAGTCA+TGG - Chr5:77584620-77584639 MsG0580028270.01.T01:CDS 60.0%
TTGCCGTCACAAGCAGGGTG+GGG + Chr5:77582472-77582491 None:intergenic 60.0%
GCGGCTTATGCCTCCTTGGG+TGG - Chr5:77584611-77584630 MsG0580028270.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 77580043 77584650 77580043 ID=MsG0580028270.01;Name=MsG0580028270.01
Chr5 mRNA 77580043 77584650 77580043 ID=MsG0580028270.01.T01;Parent=MsG0580028270.01;Name=MsG0580028270.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|0.63|1|1|11|0|734
Chr5 exon 77584554 77584650 77584554 ID=MsG0580028270.01.T01:exon:24221;Parent=MsG0580028270.01.T01
Chr5 exon 77584244 77584345 77584244 ID=MsG0580028270.01.T01:exon:24220;Parent=MsG0580028270.01.T01
Chr5 exon 77583192 77583352 77583192 ID=MsG0580028270.01.T01:exon:24219;Parent=MsG0580028270.01.T01
Chr5 exon 77582969 77583093 77582969 ID=MsG0580028270.01.T01:exon:24218;Parent=MsG0580028270.01.T01
Chr5 exon 77582717 77582848 77582717 ID=MsG0580028270.01.T01:exon:24217;Parent=MsG0580028270.01.T01
Chr5 exon 77582118 77582318 77582118 ID=MsG0580028270.01.T01:exon:24216;Parent=MsG0580028270.01.T01
Chr5 exon 77581979 77582034 77581979 ID=MsG0580028270.01.T01:exon:24215;Parent=MsG0580028270.01.T01
Chr5 exon 77581801 77581894 77581801 ID=MsG0580028270.01.T01:exon:24214;Parent=MsG0580028270.01.T01
Chr5 exon 77581573 77581666 77581573 ID=MsG0580028270.01.T01:exon:24213;Parent=MsG0580028270.01.T01
Chr5 exon 77581218 77581337 77581218 ID=MsG0580028270.01.T01:exon:24212;Parent=MsG0580028270.01.T01
Chr5 exon 77580043 77581065 77580043 ID=MsG0580028270.01.T01:exon:24211;Parent=MsG0580028270.01.T01
Chr5 CDS 77584554 77584650 77584554 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77584244 77584345 77584244 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77583192 77583352 77583192 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77582969 77583093 77582969 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77582717 77582848 77582717 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77582118 77582318 77582118 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77581979 77582034 77581979 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77581801 77581894 77581801 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77581573 77581666 77581573 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77581218 77581337 77581218 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Chr5 CDS 77580043 77581065 77580043 ID=MsG0580028270.01.T01:cds;Parent=MsG0580028270.01.T01
Gene Sequence

>MsG0580028270.01.T01

ATGATGAACCAGTTTCCTCCTTCTAGGGTTTTTGAATCTCTCCATTCCAATGATACTGCCTCTTCAAATTCTCAATCCCATGAGTTTCTCAGTTTCGATGATCAATGTTTTCAATCATGGCTGGAATCTCTCAATTCGATAGATGATGCATTCGATAATGTGTTTGCAAATTATCAGTTGCAGGAGTCTCTAACTTTTGACCAGGTCATTGATGTTGATGGAGTTGGTGGTAACTTCAATTTGGAGACCGATATGGATACATTGGGAAGCAGTACCATTGATTTCAAAAAGATTTTTGATGAGTTGGAAGCTGTGAAACAAGATACTAGTGGTGGTGTATCTTCGTTACAGTCAAGTCAGACGGAATCAGTTGGCATTAATTCATCCAGTTTGGAGTCTGATATTGCAGAAAATGTATTCCCTCGTAATATGGATGTGGAAGGCAACACAACTTTTTCTCCTAGACTAACAAGCTACTTCCAAGATTTTCAGGAGCCTTTTCACAAACTTGTCTATCCAAAAGGGGATCCAGATGCTGTTACGCTAAGTAAGAGAGATGTTGATCAATTACAACCAAATACATACATCAATGACACGATTATCGATTTTTACATTCTATATATGAAGAATAACATACAAGAGAAGCAAAAGGCTAGGTTTCACTTTTTCAATAGTTTTTTCTTTCGAAAGCTGGCTGATATGGACAAAACTCCCCACCCTGCTTGTGACGGCAAATCTGCATTTCAACATGTTCGTAAATGGACAAGAAAAGTTAATTTATTTGAAAAAGATTTCTTTTTTATGCCCGTGAACTTCAAACATCACTGGAGCTTAATAGTGATTTGTTATCCTGGCGAAGTGGTTAATATTACTGACAAAGAGCCGGAAAAGTCACTTAGGCTACCATGTATATTGCATATGGATTCTATCCAGGGACATCATAATGGTCTGAAAGACCTTGTGCAAAGTTATTTGTCTGAAGAATGGAAAGAGAGGAAGAAGGATACATATGGAGAAGACCTCTCATCAAGATTCCTGAATATGCACTTTCTCCCGGTTAGGGTACCACAGCAGGAAAACTCATTTGATTGTGGCCTCTTTTTGCTTCATTATCTAGAGCTCTTCGTGGCTCAAGTTCCATCTGATTTTAACCCTCTGAGACTAACCAATTGTTCCAACTTTCTCAATGTGGACTGGTTTCCACCTACGGATGCTTATCTCAAGCGAACACATATCCGTAAGTTAATATTTGAACTCGTGGAAAACCATGGTTCACATGAAGGCTTTTCCCCTGACGATGGTGATAACCAGCACTGCTCAGAATATATTGACAACAACAGGATTGGTGGTCAGTGTCATTTATTCAACGGGGAGGCATCGACTTCCCATTCTGGCCAAGGAATAGAAATGTTTCCATCTTACAATACTTCTAATATGGTTCTTAAGCAGCATTTTGAACCAGGAGCTGCATCGGGAACTTCACCGAGGCATTGCCAATCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGAATTGGTGGTCAGCGTCATTTATTCAACTGGGAGGCATCGACTTCCCATTCTGGCCAAGGAATAGAAATGTTTCCATCTTACAATACTTCTAATATGGTTCTTAAGGAGCATTTTGAACCGGGAGTTACATTGGGAACTTCACTAAGATATTGGCAATCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGTTCAAGACATTGCCAATCTTTTGACCAGCGATCATTATCATCATCTAACCATTTGTTCAACAGTTCAAGACATTGCCAGTCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAACAGTTCAAGACATTGCCAATCTTTTGACCAGCGATCATTACTTCATATGAATGATCCTACAGATACTATCAATTATCCGGTTGATCCTCTCATTGATATTTCTCAACACTCGAATATGATGAGTACTGGCAACAAGAATCGGTATCCACACTTATCCTATCAAGGGACACCAACTCTACAAATGCATCATGTTTCTGATGATGCAGTAGATAACAATGTCACCAATCATGATGTTCAGATTATTGATAACATTAATCTTGATTTTTGGAATGATAGACCTCCAAAGAAGAGGCGGCTTATGCCTCCTTGGGTGGAAGTCATGGAATCCTGA
Protein sequence

>MsG0580028270.01.T01

MMNQFPPSRVFESLHSNDTASSNSQSHEFLSFDDQCFQSWLESLNSIDDAFDNVFANYQLQESLTFDQVIDVDGVGGNFNLETDMDTLGSSTIDFKKIFDELEAVKQDTSGGVSSLQSSQTESVGINSSSLESDIAENVFPRNMDVEGNTTFSPRLTSYFQDFQEPFHKLVYPKGDPDAVTLSKRDVDQLQPNTYINDTIIDFYILYMKNNIQEKQKARFHFFNSFFFRKLADMDKTPHPACDGKSAFQHVRKWTRKVNLFEKDFFFMPVNFKHHWSLIVICYPGEVVNITDKEPEKSLRLPCILHMDSIQGHHNGLKDLVQSYLSEEWKERKKDTYGEDLSSRFLNMHFLPVRVPQQENSFDCGLFLLHYLELFVAQVPSDFNPLRLTNCSNFLNVDWFPPTDAYLKRTHIRKLIFELVENHGSHEGFSPDDGDNQHCSEYIDNNRIGGQCHLFNGEASTSHSGQGIEMFPSYNTSNMVLKQHFEPGAASGTSPRHCQSFDQRSLSSSNHLFNRIGGQRHLFNWEASTSHSGQGIEMFPSYNTSNMVLKEHFEPGVTLGTSLRYWQSFDQRSLSSSNHLFNSSRHCQSFDQRSLSSSNHLFNSSRHCQSFDQRSLSSSNHLFNNSSRHCQSFDQRSLLHMNDPTDTINYPVDPLIDISQHSNMMSTGNKNRYPHLSYQGTPTLQMHHVSDDAVDNNVTNHDVQIIDNINLDFWNDRPPKKRRLMPPWVEVMES*