AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028207.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028207.01.T01 MTR_5g066230 85.366 656 88 3 2 650 40 694 0.0 1141
MsG0580028207.01.T01 MTR_5g066230 83.806 247 39 1 405 651 586 831 2.33e-132 410
MsG0580028207.01.T01 MTR_5g066230 82.520 246 42 1 405 650 518 762 1.38e-128 401
MsG0580028207.01.T01 MTR_5g066230 85.854 205 29 0 405 609 654 858 2.82e-110 353
MsG0580028207.01.T01 MTR_5g066230 73.718 156 30 2 396 541 704 858 3.80e-61 219
MsG0580028207.01.T01 MTR_5g066530 86.753 385 47 3 268 650 1 383 0.0 671
MsG0580028207.01.T01 MTR_5g066530 84.959 246 36 1 405 650 207 451 1.23e-135 412
MsG0580028207.01.T01 MTR_5g066530 79.204 226 36 1 405 619 275 500 2.27e-111 349
MsG0580028207.01.T01 MTR_5g066530 64.126 223 64 4 405 622 343 554 1.41e-74 252
MsG0580028207.01.T01 MTR_5g066530 56.688 157 58 3 405 556 411 562 5.51e-35 141
MsG0580028207.01.T01 MTR_5g066240 65.843 445 125 8 31 473 52 471 1.12e-179 526
MsG0580028207.01.T01 MTR_5g066240 62.667 75 25 1 467 541 400 471 3.18e-21 99.0
MsG0580028207.01.T01 MTR_5g066240 62.667 75 25 1 535 609 400 471 1.16e-19 94.0
MsG0580028207.01.T01 MTR_3g100390 53.070 456 179 10 40 464 274 725 1.95e-136 424
MsG0580028207.01.T01 MTR_3g100390 53.070 456 179 10 40 464 277 728 2.02e-136 424
MsG0580028207.01.T01 MTR_2g009580 58.333 264 107 2 120 381 376 638 2.28e-96 317
MsG0580028207.01.T01 MTR_2g009580 58.333 264 107 2 120 381 410 672 4.42e-96 317
MsG0580028207.01.T01 MTR_8g064470 31.734 271 160 8 130 389 297 553 2.15e-35 142
MsG0580028207.01.T01 MTR_8g064470 33.951 162 92 6 130 289 297 445 3.12e-19 91.7
MsG0580028207.01.T01 MTR_8g064470 33.951 162 92 6 130 289 297 445 3.33e-19 91.7
MsG0580028207.01.T01 MTR_2g436660 27.619 210 97 10 151 343 271 442 8.92e-15 77.8
MsG0580028207.01.T01 MTR_4g119970 23.467 375 214 17 1 343 136 469 1.22e-14 77.4
MsG0580028207.01.T01 MTR_3g075090 25.000 204 129 6 157 359 91 271 8.04e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028207.01.T01 AT1G09730 55.056 356 134 6 120 454 373 723 2.84e-113 362
MsG0580028207.01.T01 AT1G09730 55.056 356 134 6 120 454 405 755 6.43e-113 362
MsG0580028207.01.T01 AT4G33620 52.416 269 120 4 117 382 281 544 7.51e-82 275
MsG0580028207.01.T01 AT1G60220 30.268 261 153 8 131 378 332 576 1.01e-31 130
MsG0580028207.01.T01 AT1G10570 31.559 263 149 9 131 378 186 432 6.62e-31 126
MsG0580028207.01.T01 AT1G10570 31.559 263 149 9 131 378 316 562 3.36e-30 126
MsG0580028207.01.T01 AT1G10570 31.559 263 149 9 131 378 317 563 3.39e-30 126
MsG0580028207.01.T01 AT4G15880 27.225 191 103 6 151 334 298 459 2.46e-17 85.9
MsG0580028207.01.T01 AT3G06910 27.749 191 103 8 151 334 310 472 7.09e-16 81.3
MsG0580028207.01.T01 AT4G00690 26.415 212 117 9 141 343 139 320 1.58e-15 79.0
MsG0580028207.01.T01 AT3G48480 29.730 148 84 6 220 363 152 283 1.24e-12 69.7

Find 148 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTACAATACTTCTAATA+TGG 0.230652 5:-76557067 MsG0580028207.01.T01:CDS
ATCTTACAATACTTCTAATA+TGG 0.230652 5:-76557475 MsG0580028207.01.T01:CDS
ATCTGACAATACTTCTAATA+TGG 0.238811 5:-76556863 MsG0580028207.01.T01:CDS
CATTTGAACGTGTTTGTAAA+TGG 0.246172 5:-76558838 MsG0580028207.01.T01:CDS
CTTTCGAAAACTGGCTGATA+TGG 0.257183 5:-76558897 MsG0580028207.01.T01:CDS
TGACATTAATTCATCAAGTT+TGG 0.272093 5:-76559841 MsG0580028207.01.T01:CDS
ATCTTACAATACGTCTAATA+TGG 0.275106 5:-76557271 MsG0580028207.01.T01:CDS
AGTTGGTGGTAACTTCAATT+TGG 0.294760 5:-76560093 MsG0580028207.01.T01:CDS
ACAGCATCTGGATCCCCTTT+TGG 0.297980 5:+76559494 None:intergenic
GTCAGTGTCATTTATTCAAC+AGG 0.301444 5:-76556930 MsG0580028207.01.T01:CDS
GTCAGTGTCATTTATTCAAC+AGG 0.301444 5:-76557542 MsG0580028207.01.T01:CDS
GGCGAAGCGGTTAATATTAC+TGG 0.304112 5:-76558642 MsG0580028207.01.T01:intron
GTGTCATTGATGTATGTATT+TGG 0.314227 5:+76559437 None:intergenic
CGTCTAATTATTTGTTCAAC+AGG 0.316866 5:-76556960 MsG0580028207.01.T01:CDS
AAATGTATTCACTTGTAGTA+TGG 0.317592 5:-76559802 MsG0580028207.01.T01:CDS
CATCTAATCATTTGTTCAAC+AGG 0.319384 5:-76557164 MsG0580028207.01.T01:CDS
CATCTAATCATTTGTTCAAC+AGG 0.319384 5:-76557368 MsG0580028207.01.T01:CDS
TTGCAGGAGTCTCTCACTTT+TGG 0.319621 5:-76561044 MsG0580028207.01.T01:intron
TACTTCTAATATGGTTCTTA+AGG 0.325007 5:-76557058 MsG0580028207.01.T01:CDS
ACTTACAAAGTTGGAACAAT+TGG 0.340942 5:+76557877 None:intergenic
GTCAATGTCATTTATTCAAT+GGG 0.343008 5:-76557338 MsG0580028207.01.T01:CDS
GAGGCATCGACTTCCCATTC+TGG 0.349420 5:-76557111 MsG0580028207.01.T01:CDS
CACAAACTTGTCTATCCAAA+AGG 0.356318 5:-76559509 MsG0580028207.01.T01:CDS
GTTTGCAAATTATCAGTTGC+AGG 0.359014 5:-76561060 MsG0580028207.01.T01:CDS
ATCAGCGTCATTTATTCAAC+GGG 0.368485 5:-76557134 MsG0580028207.01.T01:CDS
TTTGAACCAGGAAAACTATT+GGG 0.371210 5:-76557030 MsG0580028207.01.T01:CDS
GAGTCATCGACTTCCCATTC+TGG 0.371341 5:-76557315 MsG0580028207.01.T01:CDS
CTCAGAGGGTTGAAATGAAA+TGG 0.371580 5:+76557905 None:intergenic
GAGGCATCGACTTCCCATTC+TGG 0.373994 5:-76557519 MsG0580028207.01.T01:CDS
ATGGAAACATTTCTATTCCT+TGG 0.379547 5:+76557088 None:intergenic
GAGGCATCAACTTCCCATTC+TGG 0.379943 5:-76556907 MsG0580028207.01.T01:CDS
ACAGTTATTTGTCTGAAGAA+TGG 0.383303 5:-76558313 MsG0580028207.01.T01:intron
TTACTTAGCGTAACAGCATC+TGG 0.392707 5:+76559482 None:intergenic
GGTCAATGTCATTTATTCAA+TGG 0.406385 5:-76557339 MsG0580028207.01.T01:CDS
CGTAAGGAGCATTGTGATCC+AGG 0.409895 5:-76557246 MsG0580028207.01.T01:CDS
TCTATCCAGGGACATCATAA+TGG 0.411647 5:-76558487 MsG0580028207.01.T01:CDS
CCGTAAGTTAATATTTGAAC+TGG 0.415760 5:-76557655 MsG0580028207.01.T01:CDS
TATTTGTTCAACAGGATTAG+TGG 0.416300 5:-76556952 MsG0580028207.01.T01:CDS
GCTACCATGTATATTGCATA+TGG 0.420706 5:-76558512 MsG0580028207.01.T01:CDS
TGCTGGTTATCACCATCGTC+AGG 0.422984 5:+76557600 None:intergenic
CAGAATATATTGACAACAAC+AGG 0.426234 5:-76557572 MsG0580028207.01.T01:CDS
TTCTATTCCCTGGCCAGAAT+GGG 0.426921 5:+76556894 None:intergenic
TTCTATTCCCTGGCCAGAAT+GGG 0.426921 5:+76557302 None:intergenic
TTCTATTCCCTGGCCAGAAT+GGG 0.426921 5:+76557506 None:intergenic
TTCTATTCCTTGGCCAGAAT+GGG 0.429436 5:+76557098 None:intergenic
TTTCTATTCCTTGGCCAGAA+TGG 0.429928 5:+76557097 None:intergenic
TCATTATCTAGAGCTCTTCC+TGG 0.431562 5:-76557936 MsG0580028207.01.T01:CDS
AATCATTTGTTCAACAGGAT+TGG 0.437423 5:-76557159 MsG0580028207.01.T01:CDS
AATCATTTGTTCAACAGGAT+TGG 0.437423 5:-76557363 MsG0580028207.01.T01:CDS
TTAATAGTAATTTGTAATCC+TGG 0.440057 5:-76558663 MsG0580028207.01.T01:CDS
CTTCAATTTGGAGACCGATC+TGG 0.445381 5:-76560081 MsG0580028207.01.T01:CDS
GACGAGGTCATTGATGTTGA+TGG 0.454665 5:-76560116 MsG0580028207.01.T01:CDS
TTTCTATTCCCTGGCCAGAA+TGG 0.454940 5:+76556893 None:intergenic
TTTCTATTCCCTGGCCAGAA+TGG 0.454940 5:+76557301 None:intergenic
TTTCTATTCCCTGGCCAGAA+TGG 0.454940 5:+76557505 None:intergenic
GAAGTTCCCAATGTTTCTCC+TGG 0.455386 5:+76557228 None:intergenic
ACAAACTTGTCTATCCAAAA+GGG 0.462924 5:-76559508 MsG0580028207.01.T01:CDS
ATGATCGTTGGTCAAAAGAT+TGG 0.463716 5:+76556989 None:intergenic
ATGATCGCTGGTCAAAAGAT+TGG 0.463716 5:+76557193 None:intergenic
ATCAACTTCCCATTCTGGCC+AGG 0.465734 5:-76556902 MsG0580028207.01.T01:CDS
GCCATGTTGGCAGACATCAC+TGG 0.466901 5:-76558689 MsG0580028207.01.T01:intron
ATGAAAACATTTCTATTCCC+TGG 0.467516 5:+76556884 None:intergenic
GTTACTTACTTGAAGTTCAC+AGG 0.468600 5:+76558773 None:intergenic
ATGAAAACCACTTACAAAGT+TGG 0.471176 5:+76557868 None:intergenic
ATCGACTTCCCATTCTGGCC+AGG 0.472305 5:-76557514 MsG0580028207.01.T01:CDS
ATCGACTTCCCATTCTGGCC+AGG 0.472715 5:-76557310 MsG0580028207.01.T01:CDS
ATTGCATATGGATTCTATCC+AGG 0.473057 5:-76558500 MsG0580028207.01.T01:CDS
GGATAGACAAGTTTGTGAAA+AGG 0.479008 5:+76559515 None:intergenic
TTTGAACCAGGAGCTGCATC+GGG 0.479516 5:-76557438 MsG0580028207.01.T01:CDS
ATGGAAACATTTCTATTCCC+TGG 0.483194 5:+76557292 None:intergenic
ATGGAAACATTTCTATTCCC+TGG 0.483194 5:+76557496 None:intergenic
CTTGAATATGCACTTTCTCC+CGG 0.484196 5:-76558243 MsG0580028207.01.T01:intron
GAGACCGATCTGGACACGTT+GGG 0.487778 5:-76560071 MsG0580028207.01.T01:CDS
CATTTGTTCAACAGGATTGG+TGG 0.493446 5:-76557360 MsG0580028207.01.T01:CDS
TTTGCCGTCACAAGCATTGT+GGG 0.496724 5:+76558865 None:intergenic
TAAGTTAATATTTGAACTGG+TGG 0.499011 5:-76557652 MsG0580028207.01.T01:CDS
CAATATATTCTGAGCAGTGC+TGG 0.499295 5:+76557583 None:intergenic
TGGAAGTAGCTTGTTAGTCT+AGG 0.502063 5:+76559753 None:intergenic
ATCTTCATTACAGTCATGTC+AGG 0.509253 5:-76559976 MsG0580028207.01.T01:intron
GTAATATTAACCGCTTCGCC+AGG 0.509562 5:+76558645 None:intergenic
GTATTCACTTGTAGTATGGA+TGG 0.513947 5:-76559798 MsG0580028207.01.T01:CDS
AATGAAATGGAACTTGAGCC+AGG 0.514607 5:+76557918 None:intergenic
GTCATTGATGTTGATGGAGT+TGG 0.516986 5:-76560110 MsG0580028207.01.T01:CDS
TAAGATACAAGAGAAGGAAA+AGG 0.517698 5:-76558948 MsG0580028207.01.T01:CDS
TGTGGACTGGTTTCCACCTA+CGG 0.519375 5:-76557703 MsG0580028207.01.T01:CDS
TACGTCTAATATGGTTCGTA+AGG 0.519924 5:-76557262 MsG0580028207.01.T01:CDS
GAAGTTCCCGATGCAGCTCC+TGG 0.520618 5:+76557432 None:intergenic
TCAGACCATTATGATGTCCC+TGG 0.520752 5:+76558482 None:intergenic
TATTCACTTGTAGTATGGAT+GGG 0.524733 5:-76559797 MsG0580028207.01.T01:CDS
GAAAACCATGGTTCACATGA+AGG 0.530457 5:-76557630 MsG0580028207.01.T01:CDS
GAGAAACATTGGGAACTTCA+CGG 0.533114 5:-76557224 MsG0580028207.01.T01:CDS
ATTGACAACAACAGGATTGG+TGG 0.535711 5:-76557564 MsG0580028207.01.T01:CDS
TCCTTGACAGGTACCACAGC+AGG 0.535734 5:-76557990 MsG0580028207.01.T01:intron
GATCAGCGTCATTTATTCAA+CGG 0.539267 5:-76557135 MsG0580028207.01.T01:CDS
TATATTGACAACAACAGGAT+TGG 0.544673 5:-76557567 MsG0580028207.01.T01:CDS
GAAGAATAAGATACAAGAGA+AGG 0.544852 5:-76558954 MsG0580028207.01.T01:CDS
TCGACTTCCCATTCTGGCCA+AGG 0.544905 5:-76557105 MsG0580028207.01.T01:CDS
TACAAGAGAAGGAAAAGGCT+AGG 0.544986 5:-76558943 MsG0580028207.01.T01:CDS
ATTTGCCGTCACAAGCATTG+TGG 0.547017 5:+76558864 None:intergenic
TGTGATCCAGGAGAAACATT+GGG 0.547593 5:-76557234 MsG0580028207.01.T01:CDS
TTGCATATGGATTCTATCCA+GGG 0.549060 5:-76558499 MsG0580028207.01.T01:CDS
AACAATTGGTTAGTCTCAGA+GGG 0.551951 5:+76557891 None:intergenic
TGTCTGAAGAATGGAAAGAG+AGG 0.554930 5:-76558304 MsG0580028207.01.T01:CDS
TCGACTTCCCATTCTGGCCA+GGG 0.558917 5:-76557309 MsG0580028207.01.T01:CDS
TCAACTTCCCATTCTGGCCA+GGG 0.560527 5:-76556901 MsG0580028207.01.T01:CDS
ATTGATGTTGATGGAGTTGG+TGG 0.561060 5:-76560107 MsG0580028207.01.T01:CDS
CAGGAAAACTCATTTGATTG+TGG 0.562524 5:-76557971 MsG0580028207.01.T01:CDS
TGATTAGATGATGATAATGA+TGG 0.566056 5:+76557381 None:intergenic
TCGACTTCCCATTCTGGCCA+GGG 0.568090 5:-76557513 MsG0580028207.01.T01:CDS
ATATTAGAAGTATTGTAAGA+TGG 0.568436 5:+76557069 None:intergenic
ATATTAGAAGTATTGTAAGA+TGG 0.568436 5:+76557477 None:intergenic
CCAGTTCAAATATTAACTTA+CGG 0.571664 5:+76557655 None:intergenic
TTGTGATCCAGGAGAAACAT+TGG 0.573051 5:-76557235 MsG0580028207.01.T01:CDS
ATATTAGACGTATTGTAAGA+TGG 0.573310 5:+76557273 None:intergenic
GTCTGAAAGACCTTGTGCAA+AGG 0.583698 5:-76558465 MsG0580028207.01.T01:intron
GCTTCCCAACGTGTCCAGAT+CGG 0.592976 5:+76560067 None:intergenic
GCATATTTCAGACAAAGAGC+CGG 0.603949 5:-76558548 MsG0580028207.01.T01:intron
TAGATGATGATAATGATGGC+TGG 0.608914 5:+76557385 None:intergenic
ATTCACTTGTAGTATGGATG+GGG 0.609495 5:-76559796 MsG0580028207.01.T01:CDS
GCTGGTTATCACCATCGTCA+GGG 0.613048 5:+76557601 None:intergenic
TAGACGATGATAATGATCGT+TGG 0.614194 5:+76556977 None:intergenic
AGAATGGAAAGAGAGGAAGA+AGG 0.616079 5:-76558297 MsG0580028207.01.T01:CDS
TTTGAACTGGTGGAAAACCA+TGG 0.618826 5:-76557642 MsG0580028207.01.T01:CDS
GAACAATTGGTTAGTCTCAG+AGG 0.620039 5:+76557890 None:intergenic
GAATCCATATGCAATATACA+TGG 0.622872 5:+76558508 None:intergenic
CATCCCCACAATGCTTGTGA+CGG 0.622892 5:-76558869 MsG0580028207.01.T01:CDS
GGAGACCGATCTGGACACGT+TGG 0.628953 5:-76560072 MsG0580028207.01.T01:CDS
TTGAGATAAGCATCCGTAGG+TGG 0.629538 5:+76557690 None:intergenic
AAAAGCCTTCATGTGAACCA+TGG 0.631459 5:+76557625 None:intergenic
TAGATGATGATAATGATCGC+TGG 0.636105 5:+76557181 None:intergenic
CGCTTGAGATAAGCATCCGT+AGG 0.636755 5:+76557687 None:intergenic
TGTAGTATGGATGGGGAAGG+CGG 0.640368 5:-76559789 MsG0580028207.01.T01:CDS
CAAACTTGTCTATCCAAAAG+GGG 0.646120 5:-76559507 MsG0580028207.01.T01:CDS
ACTTGTAGTATGGATGGGGA+AGG 0.646130 5:-76559792 MsG0580028207.01.T01:CDS
TATTCAAGAATCTTGATGAG+AGG 0.651763 5:+76558258 None:intergenic
CTGGTTATCACCATCGTCAG+GGG 0.651767 5:+76557602 None:intergenic
TTGCCGTCACAAGCATTGTG+GGG 0.656642 5:+76558866 None:intergenic
GCGTCATTTATTCAACGGGG+AGG 0.665851 5:-76557130 MsG0580028207.01.T01:CDS
AATTTGTAATCCTGGCGAAG+CGG 0.684868 5:-76558655 MsG0580028207.01.T01:CDS
TCAATGTCATTTATTCAATG+GGG 0.686874 5:-76557337 MsG0580028207.01.T01:CDS
TCAGTGTCATTTATTCAACA+GGG 0.703259 5:-76556929 MsG0580028207.01.T01:CDS
TCAGTGTCATTTATTCAACA+GGG 0.703259 5:-76557541 MsG0580028207.01.T01:CDS
GTGTCATTTATTCAACAGGG+AGG 0.709588 5:-76556926 MsG0580028207.01.T01:CDS
GTGTCATTTATTCAACAGGG+AGG 0.709588 5:-76557538 MsG0580028207.01.T01:CDS
GCTGTGAAACAAGATACTAG+TGG 0.751401 5:-76560005 MsG0580028207.01.T01:CDS
TCAGCGTCATTTATTCAACG+GGG 0.766219 5:-76557133 MsG0580028207.01.T01:CDS
AAGAGCCGGAAAAGTCACTG+AGG 0.784069 5:-76558534 MsG0580028207.01.T01:CDS
GTGAAACAAGATACTAGTGG+TGG 0.802443 5:-76560002 MsG0580028207.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAACAAAAAATAAAAAATTT+AGG + Chr5:76556947-76556966 None:intergenic 10.0%
!! TTAAGTTATATTATTTCAAT+TGG - Chr5:76560135-76560154 MsG0580028207.01.T01:intron 10.0%
!! AAAAAAATCAAAAACTAACA+CGG + Chr5:76556981-76557000 None:intergenic 15.0%
!! ATCAACTGTTAATAAAATAA+AGG + Chr5:76558736-76558755 None:intergenic 15.0%
!! GATTATAATTTATAACCAAA+TGG - Chr5:76558788-76558807 MsG0580028207.01.T01:CDS 15.0%
!!! AAAAATCTTTTTGAAATCAA+TGG + Chr5:76557898-76557917 None:intergenic 15.0%
!!! ATTTTTAAAATTTTGAAGTG+CGG - Chr5:76557286-76557305 MsG0580028207.01.T01:CDS 15.0%
!!! TATAAATCCTCTAATATTTT+TGG - Chr5:76558227-76558246 MsG0580028207.01.T01:intron 15.0%
!!! TTAAAAATTACAAATGGATT+TGG + Chr5:76557548-76557567 None:intergenic 15.0%
!!! TTTTTAAATTACTTTCATCA+CGG - Chr5:76558252-76558271 MsG0580028207.01.T01:CDS 15.0%
!! AAAAAATGACTTTCAATATC+AGG - Chr5:76558835-76558854 MsG0580028207.01.T01:CDS 20.0%
!! AAAAACACCAAAAATATTAG+AGG + Chr5:76558237-76558256 None:intergenic 20.0%
!! AATGTAAACAAACAGATTTA+TGG - Chr5:76558881-76558900 MsG0580028207.01.T01:CDS 20.0%
!! AGAAAAAACTATTGAAAAAG+TGG + Chr5:76559020-76559039 None:intergenic 20.0%
!! ATCTTACAATACTTCTAATA+TGG - Chr5:76560460-76560479 MsG0580028207.01.T01:intron 20.0%
!! CTTAAAAAATATATATGGTG+AGG + Chr5:76560120-76560139 None:intergenic 20.0%
!! GAATCATTACAATAATTGAT+TGG - Chr5:76557444-76557463 MsG0580028207.01.T01:CDS 20.0%
!! GGAAAGTTAAAAATTACAAA+TGG + Chr5:76557554-76557573 None:intergenic 20.0%
!! TATAATTTATAACCAAATGG+TGG - Chr5:76558791-76558810 MsG0580028207.01.T01:CDS 20.0%
!! TATATAACTCACAAACAAAA+TGG + Chr5:76559581-76559600 None:intergenic 20.0%
!! TTAGTAAAAACACAATCAAA+TGG + Chr5:76559910-76559929 None:intergenic 20.0%
!!! AATGTGCATTTATTTTTGTA+TGG + Chr5:76557677-76557696 None:intergenic 20.0%
!!! ATATTAGAAGTATTGTAAGA+TGG + Chr5:76560461-76560480 None:intergenic 20.0%
!!! ATTTTTAAGTTTACATCCTA+AGG - Chr5:76558011-76558030 MsG0580028207.01.T01:intron 20.0%
!!! CAAAATCGAGATTTTTTAAA+CGG + Chr5:76558951-76558970 None:intergenic 20.0%
!!! TACTTCTAATATGGTTTTTA+AGG - Chr5:76561081-76561100 MsG0580028207.01.T01:CDS 20.0%
!!! TCTGAGTTGATAAAATTTAA+GGG - Chr5:76557395-76557414 MsG0580028207.01.T01:CDS 20.0%
!!! TTAATAGTAATTTGTAATCC+TGG - Chr5:76559272-76559291 MsG0580028207.01.T01:intron 20.0%
! AAAACAATTGCACAATGAAT+TGG + Chr5:76557788-76557807 None:intergenic 25.0%
! AAAATAGATTGAGATCCTTA+AGG + Chr5:76557996-76558015 None:intergenic 25.0%
! AAATAGATTGAGATCCTTAA+GGG + Chr5:76557995-76558014 None:intergenic 25.0%
! AAATGTATTCACTTGTAGTA+TGG - Chr5:76558133-76558152 MsG0580028207.01.T01:intron 25.0%
! ACGTTATAACTAGTGAAAAA+TGG - Chr5:76558914-76558933 MsG0580028207.01.T01:CDS 25.0%
! AGAAAAATTCAACATATGTC+AGG + Chr5:76560205-76560224 None:intergenic 25.0%
! ATAAATGCACATTCAATTCT+CGG - Chr5:76557684-76557703 MsG0580028207.01.T01:CDS 25.0%
! ATAGAATCTACTCAAAATTG+TGG - Chr5:76557261-76557280 MsG0580028207.01.T01:CDS 25.0%
! ATATTAGACGTATTGTAAGA+TGG + Chr5:76560665-76560684 None:intergenic 25.0%
! ATCTGACAATACTTCTAATA+TGG - Chr5:76561072-76561091 MsG0580028207.01.T01:CDS 25.0%
! ATCTTACAATACGTCTAATA+TGG - Chr5:76560664-76560683 MsG0580028207.01.T01:intron 25.0%
! CCAGTTCAAATATTAACTTA+CGG + Chr5:76560283-76560302 None:intergenic 25.0%
! CGTTATAACTAGTGAAAAAT+GGG - Chr5:76558915-76558934 MsG0580028207.01.T01:CDS 25.0%
! CTTAGCATAAAGTTTAGATT+AGG - Chr5:76557027-76557046 MsG0580028207.01.T01:CDS 25.0%
! TAAGTTAATATTTGAACTGG+TGG - Chr5:76560283-76560302 MsG0580028207.01.T01:intron 25.0%
! TACTTCTAATATGGTTCTTA+AGG - Chr5:76560469-76560488 MsG0580028207.01.T01:intron 25.0%
! TAGAGATTTAGTTGTATTGT+AGG - Chr5:76558034-76558053 MsG0580028207.01.T01:intron 25.0%
! TCAAACTGAAATCTTCAATT+AGG + Chr5:76557575-76557594 None:intergenic 25.0%
! TCATCATTAAAACAATCGAT+TGG - Chr5:76557224-76557243 MsG0580028207.01.T01:CDS 25.0%
! TCCAAATAAATACAATGCTA+GGG + Chr5:76557203-76557222 None:intergenic 25.0%
! TGACATTAATTCATCAAGTT+TGG - Chr5:76558094-76558113 MsG0580028207.01.T01:intron 25.0%
! TTCCAAATAAATACAATGCT+AGG + Chr5:76557204-76557223 None:intergenic 25.0%
! TTGAAGAAGATTCAAATAAG+AGG - Chr5:76557153-76557172 MsG0580028207.01.T01:CDS 25.0%
!! AATATTGTTATTGTGAACCT+TGG - Chr5:76558672-76558691 MsG0580028207.01.T01:CDS 25.0%
!! CAAAAAGATTTTTGATGAGT+TGG - Chr5:76557905-76557924 MsG0580028207.01.T01:CDS 25.0%
!! CGTTTAAAAAATCTCGATTT+TGG - Chr5:76558949-76558968 MsG0580028207.01.T01:CDS 25.0%
!! GTCAATGTCATTTATTCAAT+GGG - Chr5:76560597-76560616 MsG0580028207.01.T01:intron 25.0%
!! TCAATGTCATTTATTCAATG+GGG - Chr5:76560598-76560617 MsG0580028207.01.T01:intron 25.0%
!! TGATTAGATGATGATAATGA+TGG + Chr5:76560557-76560576 None:intergenic 25.0%
!! TTCTGATTGGAATTCAATTT+TGG - Chr5:76559224-76559243 MsG0580028207.01.T01:intron 25.0%
!!! GTCTGAGTTGATAAAATTTA+AGG - Chr5:76557394-76557413 MsG0580028207.01.T01:CDS 25.0%
!!! TAGTTTTTTCTTTCGAAAAC+TGG - Chr5:76559029-76559048 MsG0580028207.01.T01:intron 25.0%
!!! TATTTTTTTGTGCTTACTCT+TGG + Chr5:76558205-76558224 None:intergenic 25.0%
!!! TCTGAGTTGATAAAATTGAA+TGG - Chr5:76557109-76557128 MsG0580028207.01.T01:CDS 25.0%
AATCATTTGTTCAACAGGAT+TGG - Chr5:76560572-76560591 MsG0580028207.01.T01:intron 30.0%
AATTGTTCCAACTTTGTAAG+TGG - Chr5:76560060-76560079 MsG0580028207.01.T01:CDS 30.0%
ACAAAATTGAGCAGAAATAC+AGG + Chr5:76558592-76558611 None:intergenic 30.0%
ACAAACTTGTCTATCCAAAA+GGG - Chr5:76558427-76558446 MsG0580028207.01.T01:intron 30.0%
ACAAAGTTTAGGCCAAATAA+CGG + Chr5:76559825-76559844 None:intergenic 30.0%
ACAGTTATTTGTCTGAAGAA+TGG - Chr5:76559622-76559641 MsG0580028207.01.T01:intron 30.0%
ACCCTAGCATTGTATTTATT+TGG - Chr5:76557199-76557218 MsG0580028207.01.T01:CDS 30.0%
ACTTACAAAGTTGGAACAAT+TGG + Chr5:76560061-76560080 None:intergenic 30.0%
AGAAATGAATTAGTGACTAG+TGG - Chr5:76557597-76557616 MsG0580028207.01.T01:CDS 30.0%
AGAGAAGGAAATTTAATGCA+CGG + Chr5:76559522-76559541 None:intergenic 30.0%
AGCATAAAGTTTAGATTAGG+AGG - Chr5:76557030-76557049 MsG0580028207.01.T01:CDS 30.0%
ATACCTTGTGCATAACATTA+TGG - Chr5:76558300-76558319 MsG0580028207.01.T01:CDS 30.0%
ATGAAAACATTTCTATTCCC+TGG + Chr5:76561054-76561073 None:intergenic 30.0%
ATGAAAACCACTTACAAAGT+TGG + Chr5:76560070-76560089 None:intergenic 30.0%
ATGGAAACATTTCTATTCCT+TGG + Chr5:76560850-76560869 None:intergenic 30.0%
ATGGTGAGGAACAAAATAAT+TGG + Chr5:76560106-76560125 None:intergenic 30.0%
CAAAATGCAAACATTGTATG+TGG - Chr5:76558358-76558377 MsG0580028207.01.T01:intron 30.0%
CAACACAAATCTTGTTCAAT+TGG + Chr5:76557484-76557503 None:intergenic 30.0%
CAGAATATATTGACAACAAC+AGG - Chr5:76560363-76560382 MsG0580028207.01.T01:intron 30.0%
CATCTAATCATTTGTTCAAC+AGG - Chr5:76560567-76560586 MsG0580028207.01.T01:intron 30.0%
CATTTGAACGTGTTTGTAAA+TGG - Chr5:76559097-76559116 MsG0580028207.01.T01:intron 30.0%
CCGTAAGTTAATATTTGAAC+TGG - Chr5:76560280-76560299 MsG0580028207.01.T01:intron 30.0%
CGTCTAATTATTTGTTCAAC+AGG - Chr5:76560975-76560994 MsG0580028207.01.T01:intron 30.0%
CTAGATAATGAAGCAAAAAG+AGG + Chr5:76559990-76560009 None:intergenic 30.0%
GAAGAATAAGATACAAGAGA+AGG - Chr5:76558981-76559000 MsG0580028207.01.T01:intron 30.0%
GAATCCATATGCAATATACA+TGG + Chr5:76559430-76559449 None:intergenic 30.0%
GATTCATATGGTTGCTTATA+TGG - Chr5:76560173-76560192 MsG0580028207.01.T01:intron 30.0%
GGTATTTAGTGATTTCACAT+CGG + Chr5:76558285-76558304 None:intergenic 30.0%
TAACTGTCAATTTCAGAAGA+TGG + Chr5:76559609-76559628 None:intergenic 30.0%
TAAGATACAAGAGAAGGAAA+AGG - Chr5:76558987-76559006 MsG0580028207.01.T01:intron 30.0%
TACAACTAAATCTCTACCTT+AGG + Chr5:76558030-76558049 None:intergenic 30.0%
TATATTGACAACAACAGGAT+TGG - Chr5:76560368-76560387 MsG0580028207.01.T01:intron 30.0%
TATTCAAGAATCTTGATGAG+AGG + Chr5:76559680-76559699 None:intergenic 30.0%
TATTCACTTGTAGTATGGAT+GGG - Chr5:76558138-76558157 MsG0580028207.01.T01:intron 30.0%
TATTTGTTCAACAGGATTAG+TGG - Chr5:76560983-76561002 MsG0580028207.01.T01:intron 30.0%
TCCTCACAATAAAAATCAAG+AGG + Chr5:76557719-76557738 None:intergenic 30.0%
TTCAAAAAGCGACAAAGTTT+AGG + Chr5:76559836-76559855 None:intergenic 30.0%
TTGATCATTGCAAAAAAGAG+AGG + Chr5:76557007-76557026 None:intergenic 30.0%
TTTGAACCAGGAAAACTATT+GGG - Chr5:76560905-76560924 MsG0580028207.01.T01:intron 30.0%
! AACTTTGTAAGTGGTTTTCA+TGG - Chr5:76560069-76560088 MsG0580028207.01.T01:CDS 30.0%
! ACATTGACATCTTTTGCTTA+GGG + Chr5:76557323-76557342 None:intergenic 30.0%
! ATCTGTATTGATGTTCTGAT+TGG - Chr5:76559211-76559230 MsG0580028207.01.T01:intron 30.0%
! CACATACAATGTTTGCATTT+TGG + Chr5:76558360-76558379 None:intergenic 30.0%
! CATTCAAGTTAAAGAAGAGA+AGG + Chr5:76559537-76559556 None:intergenic 30.0%
! GGTCAATGTCATTTATTCAA+TGG - Chr5:76560596-76560615 MsG0580028207.01.T01:intron 30.0%
! GGTTGATATCTTTCAACTTA+TGG - Chr5:76557618-76557637 MsG0580028207.01.T01:CDS 30.0%
! GTGTCATTGATGTATGTATT+TGG + Chr5:76558501-76558520 None:intergenic 30.0%
! GTTAGTGCATGTTTTCTTTT+TGG - Chr5:76558550-76558569 MsG0580028207.01.T01:intron 30.0%
! TACATTGACATCTTTTGCTT+AGG + Chr5:76557324-76557343 None:intergenic 30.0%
! TATGTCATTCTTTTTGCAGA+CGG - Chr5:76558064-76558083 MsG0580028207.01.T01:intron 30.0%
! TCCTCTTGATTTTTATTGTG+AGG - Chr5:76557715-76557734 MsG0580028207.01.T01:intron 30.0%
! TTCTACAGAGTTCTCTTTTT+GGG - Chr5:76558323-76558342 MsG0580028207.01.T01:intron 30.0%
! TTTTGAACCAGGAAAACTAT+TGG - Chr5:76560904-76560923 MsG0580028207.01.T01:intron 30.0%
!! ACTACTTTGCTGTTTAAGAT+GGG - Chr5:76557366-76557385 MsG0580028207.01.T01:CDS 30.0%
!! TACTACTTTGCTGTTTAAGA+TGG - Chr5:76557365-76557384 MsG0580028207.01.T01:CDS 30.0%
!! TCAGTGTCATTTATTCAACA+GGG - Chr5:76560394-76560413 MsG0580028207.01.T01:intron 30.0%
!!! TCAAGCTCACATTTTTTTCA+AGG + Chr5:76557137-76557156 None:intergenic 30.0%
!!! TGAATTTTTCTAGCTCAATG+TGG - Chr5:76560214-76560233 MsG0580028207.01.T01:intron 30.0%
AAACTCAACTAATCATCAGC+CGG + Chr5:76559877-76559896 None:intergenic 35.0%
AAGCAACCATATGAATCACT+AGG + Chr5:76560170-76560189 None:intergenic 35.0%
ACATTGTATGTGGCTAATTC+TGG - Chr5:76558368-76558387 MsG0580028207.01.T01:intron 35.0%
AGCAACCATATGAATCACTA+GGG + Chr5:76560169-76560188 None:intergenic 35.0%
ATCAGCGTCATTTATTCAAC+GGG - Chr5:76560801-76560820 MsG0580028207.01.T01:intron 35.0%
ATCTTCATTACAGTCATGTC+AGG - Chr5:76557959-76557978 MsG0580028207.01.T01:CDS 35.0%
ATGATCGTTGGTCAAAAGAT+TGG + Chr5:76560949-76560968 None:intergenic 35.0%
ATGGAAACATTTCTATTCCC+TGG + Chr5:76560442-76560461 None:intergenic 35.0%
ATTCACTTGTAGTATGGATG+GGG - Chr5:76558139-76558158 MsG0580028207.01.T01:intron 35.0%
ATTGCATATGGATTCTATCC+AGG - Chr5:76559435-76559454 MsG0580028207.01.T01:CDS 35.0%
CAAACTTGTCTATCCAAAAG+GGG - Chr5:76558428-76558447 MsG0580028207.01.T01:intron 35.0%
CAAAGTTTAGGCCAAATAAC+GGG + Chr5:76559824-76559843 None:intergenic 35.0%
CAAATCTTGTTCAATTGGAG+TGG + Chr5:76557479-76557498 None:intergenic 35.0%
CAATCGATTGGAATTTGATG+TGG - Chr5:76557236-76557255 MsG0580028207.01.T01:CDS 35.0%
CACAAACTTGTCTATCCAAA+AGG - Chr5:76558426-76558445 MsG0580028207.01.T01:intron 35.0%
CAGCATGCTGTTAAAATGTA+AGG + Chr5:76559732-76559751 None:intergenic 35.0%
CAGGAAAACTCATTTGATTG+TGG - Chr5:76559964-76559983 MsG0580028207.01.T01:intron 35.0%
CAGGTATATTATGTCCCTTA+AGG - Chr5:76557978-76557997 MsG0580028207.01.T01:CDS 35.0%
CTCAAAAATACCTTTGCACA+AGG + Chr5:76559483-76559502 None:intergenic 35.0%
GAACCATAATGTTATGCACA+AGG + Chr5:76558306-76558325 None:intergenic 35.0%
GAGAAAAGATGAATGTTCCA+AGG + Chr5:76558692-76558711 None:intergenic 35.0%
GATCAGCGTCATTTATTCAA+CGG - Chr5:76560800-76560819 MsG0580028207.01.T01:intron 35.0%
GCTACCATGTATATTGCATA+TGG - Chr5:76559423-76559442 MsG0580028207.01.T01:CDS 35.0%
GGATAGACAAGTTTGTGAAA+AGG + Chr5:76558423-76558442 None:intergenic 35.0%
GTATTCACTTGTAGTATGGA+TGG - Chr5:76558137-76558156 MsG0580028207.01.T01:intron 35.0%
GTTACTTACTTGAAGTTCAC+AGG + Chr5:76559165-76559184 None:intergenic 35.0%
GTTTGCAAATTATCAGTTGC+AGG - Chr5:76556875-76556894 MsG0580028207.01.T01:CDS 35.0%
TAACTCCCTAGTGATTCATA+TGG - Chr5:76560161-76560180 MsG0580028207.01.T01:intron 35.0%
TACGTCTAATATGGTTCGTA+AGG - Chr5:76560673-76560692 MsG0580028207.01.T01:intron 35.0%
TCGTTGAAAAAAAGTGAGCT+TGG - Chr5:76557419-76557438 MsG0580028207.01.T01:CDS 35.0%
TTGCATATGGATTCTATCCA+GGG - Chr5:76559436-76559455 MsG0580028207.01.T01:CDS 35.0%
TTTATAAGTGCACCACCATT+TGG + Chr5:76558806-76558825 None:intergenic 35.0%
! ATTTATTTCTCGCCTATCTC+CGG - Chr5:76559855-76559874 MsG0580028207.01.T01:CDS 35.0%
! GTTCTACAGAGTTCTCTTTT+TGG - Chr5:76558322-76558341 MsG0580028207.01.T01:intron 35.0%
! TAGACGATGATAATGATCGT+TGG + Chr5:76560961-76560980 None:intergenic 35.0%
! TAGATGATGATAATGATCGC+TGG + Chr5:76560757-76560776 None:intergenic 35.0%
! TAGATGATGATAATGATGGC+TGG + Chr5:76560553-76560572 None:intergenic 35.0%
! TTTTTGCAAGTCCCGTTATT+TGG - Chr5:76559810-76559829 MsG0580028207.01.T01:CDS 35.0%
!! AACAATTGGTTAGTCTCAGA+GGG + Chr5:76560047-76560066 None:intergenic 35.0%
!! AGTTGGTGGTAACTTCAATT+TGG - Chr5:76557842-76557861 MsG0580028207.01.T01:intron 35.0%
!! GAATTCAATTTTGGCCATGT+TGG - Chr5:76559233-76559252 MsG0580028207.01.T01:intron 35.0%
!! GAATTGGAAGTACTAAAACG+TGG + Chr5:76557772-76557791 None:intergenic 35.0%
!! GGTTTTTAAGGAGCAACATT+GGG - Chr5:76561093-76561112 MsG0580028207.01.T01:CDS 35.0%
!! GTCAGTGTCATTTATTCAAC+AGG - Chr5:76560393-76560412 MsG0580028207.01.T01:intron 35.0%
!! TCATGTCTGAAACAGTTTTC+AGG - Chr5:76558395-76558414 MsG0580028207.01.T01:intron 35.0%
!! TGGTTTTTAAGGAGCAACAT+TGG - Chr5:76561092-76561111 MsG0580028207.01.T01:CDS 35.0%
AAAAGCCTTCATGTGAACCA+TGG + Chr5:76560313-76560332 None:intergenic 40.0%
AATGAAATGGAACTTGAGCC+AGG + Chr5:76560020-76560039 None:intergenic 40.0%
AATTTGTAATCCTGGCGAAG+CGG - Chr5:76559280-76559299 MsG0580028207.01.T01:intron 40.0%
AGAATGGAAAGAGAGGAAGA+AGG - Chr5:76559638-76559657 MsG0580028207.01.T01:intron 40.0%
ATGATCGCTGGTCAAAAGAT+TGG + Chr5:76560745-76560764 None:intergenic 40.0%
ATTGACAACAACAGGATTGG+TGG - Chr5:76560371-76560390 MsG0580028207.01.T01:intron 40.0%
CAATATATTCTGAGCAGTGC+TGG + Chr5:76560355-76560374 None:intergenic 40.0%
CATTTGTTCAACAGGATTGG+TGG - Chr5:76560575-76560594 MsG0580028207.01.T01:intron 40.0%
CTCAGAGGGTTGAAATGAAA+TGG + Chr5:76560033-76560052 None:intergenic 40.0%
CTTGAATATGCACTTTCTCC+CGG - Chr5:76559692-76559711 MsG0580028207.01.T01:intron 40.0%
CTTTCGAAAACTGGCTGATA+TGG - Chr5:76559038-76559057 MsG0580028207.01.T01:intron 40.0%
GAAAACCATGGTTCACATGA+AGG - Chr5:76560305-76560324 MsG0580028207.01.T01:intron 40.0%
GAGAAACATTGGGAACTTCA+CGG - Chr5:76560711-76560730 MsG0580028207.01.T01:intron 40.0%
GCATATTTCAGACAAAGAGC+CGG - Chr5:76559387-76559406 MsG0580028207.01.T01:intron 40.0%
GCTGTGAAACAAGATACTAG+TGG - Chr5:76557930-76557949 MsG0580028207.01.T01:CDS 40.0%
GTGAAACAAGATACTAGTGG+TGG - Chr5:76557933-76557952 MsG0580028207.01.T01:CDS 40.0%
TACAAGAGAAGGAAAAGGCT+AGG - Chr5:76558992-76559011 MsG0580028207.01.T01:intron 40.0%
TCAGCGTCATTTATTCAACG+GGG - Chr5:76560802-76560821 MsG0580028207.01.T01:intron 40.0%
TCTATCCAGGGACATCATAA+TGG - Chr5:76559448-76559467 MsG0580028207.01.T01:CDS 40.0%
TGTCTGAAGAATGGAAAGAG+AGG - Chr5:76559631-76559650 MsG0580028207.01.T01:intron 40.0%
TGTGATCCAGGAGAAACATT+GGG - Chr5:76560701-76560720 MsG0580028207.01.T01:intron 40.0%
TTACTTAGCGTAACAGCATC+TGG + Chr5:76558456-76558475 None:intergenic 40.0%
TTCTATTCCTTGGCCAGAAT+GGG + Chr5:76560840-76560859 None:intergenic 40.0%
TTGTGATCCAGGAGAAACAT+TGG - Chr5:76560700-76560719 MsG0580028207.01.T01:intron 40.0%
TTTCTATTCCTTGGCCAGAA+TGG + Chr5:76560841-76560860 None:intergenic 40.0%
TTTGAACTGGTGGAAAACCA+TGG - Chr5:76560293-76560312 MsG0580028207.01.T01:intron 40.0%
! ATTGATGTTGATGGAGTTGG+TGG - Chr5:76557828-76557847 MsG0580028207.01.T01:intron 40.0%
! CTTAAGCAGCATTTTGAACC+AGG - Chr5:76560485-76560504 MsG0580028207.01.T01:intron 40.0%
! GAAGTTCCCAATAGTTTTCC+TGG + Chr5:76560914-76560933 None:intergenic 40.0%
! GTCATTGATGTTGATGGAGT+TGG - Chr5:76557825-76557844 MsG0580028207.01.T01:intron 40.0%
! TCAAATGAGTTTTCCTGCTG+TGG + Chr5:76559961-76559980 None:intergenic 40.0%
! TCATTATCTAGAGCTCTTCC+TGG - Chr5:76559999-76560018 MsG0580028207.01.T01:CDS 40.0%
!! GAACAATTGGTTAGTCTCAG+AGG + Chr5:76560048-76560067 None:intergenic 40.0%
!! GTGTCATTTATTCAACAGGG+AGG - Chr5:76560397-76560416 MsG0580028207.01.T01:intron 40.0%
!! TGGAAGTAGCTTGTTAGTCT+AGG + Chr5:76558185-76558204 None:intergenic 40.0%
!!! CTTAAGGAGCATTTTGAACC+AGG - Chr5:76560893-76560912 MsG0580028207.01.T01:intron 40.0%
!!! GAGTTCTCTTTTTGGGACAT+AGG - Chr5:76558330-76558349 MsG0580028207.01.T01:intron 40.0%
!!! TTTTCTAGCTCAATGTGGAC+TGG - Chr5:76560219-76560238 MsG0580028207.01.T01:intron 40.0%
ACTAATCATCAGCCGGAGAT+AGG + Chr5:76559870-76559889 None:intergenic 45.0%
ACTTGTAGTATGGATGGGGA+AGG - Chr5:76558143-76558162 MsG0580028207.01.T01:intron 45.0%
ATATGCACTTTCTCCCGGTT+AGG - Chr5:76559697-76559716 MsG0580028207.01.T01:intron 45.0%
CTTCAATTTGGAGACCGATC+TGG - Chr5:76557854-76557873 MsG0580028207.01.T01:intron 45.0%
GAAGTTCCCAATGTTTCTCC+TGG + Chr5:76560710-76560729 None:intergenic 45.0%
GACGAGGTCATTGATGTTGA+TGG - Chr5:76557819-76557838 MsG0580028207.01.T01:intron 45.0%
GGCGAAGCGGTTAATATTAC+TGG - Chr5:76559293-76559312 MsG0580028207.01.T01:intron 45.0%
GTAATATTAACCGCTTCGCC+AGG + Chr5:76559293-76559312 None:intergenic 45.0%
GTCTGAAAGACCTTGTGCAA+AGG - Chr5:76559470-76559489 MsG0580028207.01.T01:CDS 45.0%
TAAGGAAGACGTACCCTAAC+CGG + Chr5:76559714-76559733 None:intergenic 45.0%
TATGCACTTTCTCCCGGTTA+GGG - Chr5:76559698-76559717 MsG0580028207.01.T01:intron 45.0%
TCAGACCATTATGATGTCCC+TGG + Chr5:76559456-76559475 None:intergenic 45.0%
TGTGACTGAATGTCCTTGAC+AGG - Chr5:76559933-76559952 MsG0580028207.01.T01:intron 45.0%
TTCTATTCCCTGGCCAGAAT+GGG + Chr5:76560432-76560451 None:intergenic 45.0%
TTGAGATAAGCATCCGTAGG+TGG + Chr5:76560248-76560267 None:intergenic 45.0%
TTTCTATTCCCTGGCCAGAA+TGG + Chr5:76560433-76560452 None:intergenic 45.0%
! ATTTGCCGTCACAAGCATTG+TGG + Chr5:76559074-76559093 None:intergenic 45.0%
! GTTTTCTTGTCATGCAGACG+AGG - Chr5:76557803-76557822 MsG0580028207.01.T01:intron 45.0%
! TTGCAGGAGTCTCTCACTTT+TGG - Chr5:76556891-76556910 MsG0580028207.01.T01:CDS 45.0%
! TTTGCCGTCACAAGCATTGT+GGG + Chr5:76559073-76559092 None:intergenic 45.0%
! TTTTGAACCAGGAGCTGCAT+CGG - Chr5:76560496-76560515 MsG0580028207.01.T01:intron 45.0%
!! TATAACTTAAAAAATATATA+TGG + Chr5:76560125-76560144 None:intergenic 5.0%
AAGAGCCGGAAAAGTCACTG+AGG - Chr5:76559401-76559420 MsG0580028207.01.T01:intron 50.0%
AAGGAAGACGTACCCTAACC+GGG + Chr5:76559713-76559732 None:intergenic 50.0%
ATCAACTTCCCATTCTGGCC+AGG - Chr5:76561033-76561052 MsG0580028207.01.T01:intron 50.0%
CATCCCCACAATGCTTGTGA+CGG - Chr5:76559066-76559085 MsG0580028207.01.T01:intron 50.0%
CGCTTGAGATAAGCATCCGT+AGG + Chr5:76560251-76560270 None:intergenic 50.0%
CTGGTTATCACCATCGTCAG+GGG + Chr5:76560336-76560355 None:intergenic 50.0%
GCGTCATTTATTCAACGGGG+AGG - Chr5:76560805-76560824 MsG0580028207.01.T01:intron 50.0%
GCTGGTTATCACCATCGTCA+GGG + Chr5:76560337-76560356 None:intergenic 50.0%
TCAACTTCCCATTCTGGCCA+GGG - Chr5:76561034-76561053 MsG0580028207.01.T01:intron 50.0%
TCCAGTGATGTCTGCCAACA+TGG + Chr5:76559250-76559269 None:intergenic 50.0%
TGTAGTATGGATGGGGAAGG+CGG - Chr5:76558146-76558165 MsG0580028207.01.T01:intron 50.0%
TTTGAACCAGGAGCTGCATC+GGG - Chr5:76560497-76560516 MsG0580028207.01.T01:intron 50.0%
! ACAGCATCTGGATCCCCTTT+TGG + Chr5:76558444-76558463 None:intergenic 50.0%
! GAGGCATCAACTTCCCATTC+TGG - Chr5:76561028-76561047 MsG0580028207.01.T01:intron 50.0%
! GGTAGCCTCAGTGACTTTTC+CGG + Chr5:76559409-76559428 None:intergenic 50.0%
! TGCTGGTTATCACCATCGTC+AGG + Chr5:76560338-76560357 None:intergenic 50.0%
! TTGCCGTCACAAGCATTGTG+GGG + Chr5:76559072-76559091 None:intergenic 50.0%
!! CGTAAGGAGCATTGTGATCC+AGG - Chr5:76560689-76560708 MsG0580028207.01.T01:intron 50.0%
!! GAGTCATCGACTTCCCATTC+TGG - Chr5:76560620-76560639 MsG0580028207.01.T01:intron 50.0%
!! TGTGGACTGGTTTCCACCTA+CGG - Chr5:76560232-76560251 MsG0580028207.01.T01:intron 50.0%
GAGACCGATCTGGACACGTT+GGG - Chr5:76557864-76557883 MsG0580028207.01.T01:intron 55.0%
GCCATGTTGGCAGACATCAC+TGG - Chr5:76559246-76559265 MsG0580028207.01.T01:intron 55.0%
GCTTCCCAACGTGTCCAGAT+CGG + Chr5:76557871-76557890 None:intergenic 55.0%
TCCTGCTGTGGTACCTGTCA+AGG + Chr5:76559949-76559968 None:intergenic 55.0%
TCCTTGACAGGTACCACAGC+AGG - Chr5:76559945-76559964 MsG0580028207.01.T01:intron 55.0%
TCGACTTCCCATTCTGGCCA+AGG - Chr5:76560422-76560441 MsG0580028207.01.T01:intron 55.0%
TCGACTTCCCATTCTGGCCA+GGG - Chr5:76560422-76560441 MsG0580028207.01.T01:intron 55.0%
! ATCGACTTCCCATTCTGGCC+AGG - Chr5:76560421-76560440 MsG0580028207.01.T01:intron 55.0%
! GAAGGCTTTTCCCCTGACGA+TGG - Chr5:76560323-76560342 MsG0580028207.01.T01:intron 55.0%
!! GAGGCATCGACTTCCCATTC+TGG - Chr5:76560416-76560435 MsG0580028207.01.T01:intron 55.0%
GAAGTTCCCGATGCAGCTCC+TGG + Chr5:76560506-76560525 None:intergenic 60.0%
GGAGACCGATCTGGACACGT+TGG - Chr5:76557863-76557882 MsG0580028207.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 76556831 76561126 76556831 ID=MsG0580028207.01;Name=MsG0580028207.01
Chr5 mRNA 76556831 76561126 76556831 ID=MsG0580028207.01.T01;Parent=MsG0580028207.01;Name=MsG0580028207.01.T01;_AED=0.48;_eAED=0.59;_QI=0|0|0|1|1|1|10|0|652
Chr5 exon 76561045 76561126 76561045 ID=MsG0580028207.01.T01:exon:46138;Parent=MsG0580028207.01.T01
Chr5 exon 76559977 76560137 76559977 ID=MsG0580028207.01.T01:exon:46137;Parent=MsG0580028207.01.T01
Chr5 exon 76559750 76559874 76559750 ID=MsG0580028207.01.T01:exon:46136;Parent=MsG0580028207.01.T01
Chr5 exon 76559416 76559547 76559416 ID=MsG0580028207.01.T01:exon:46135;Parent=MsG0580028207.01.T01
Chr5 exon 76558782 76558982 76558782 ID=MsG0580028207.01.T01:exon:46134;Parent=MsG0580028207.01.T01
Chr5 exon 76558643 76558698 76558643 ID=MsG0580028207.01.T01:exon:46133;Parent=MsG0580028207.01.T01
Chr5 exon 76558466 76558559 76558466 ID=MsG0580028207.01.T01:exon:46132;Parent=MsG0580028207.01.T01
Chr5 exon 76558244 76558331 76558244 ID=MsG0580028207.01.T01:exon:46131;Parent=MsG0580028207.01.T01
Chr5 exon 76557883 76558002 76557883 ID=MsG0580028207.01.T01:exon:46130;Parent=MsG0580028207.01.T01
Chr5 exon 76556831 76557730 76556831 ID=MsG0580028207.01.T01:exon:46129;Parent=MsG0580028207.01.T01
Chr5 CDS 76561045 76561126 76561045 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76559977 76560137 76559977 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76559750 76559874 76559750 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76559416 76559547 76559416 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76558782 76558982 76558782 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76558643 76558698 76558643 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76558466 76558559 76558466 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76558244 76558331 76558244 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76557883 76558002 76557883 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Chr5 CDS 76556831 76557730 76556831 ID=MsG0580028207.01.T01:cds;Parent=MsG0580028207.01.T01
Gene Sequence

>MsG0580028207.01.T01

ATGTTGGAATCTCTCAATTTGAATGATGATGCATTCGATAATGTGTTTGCAAATTATCAGTTGCAGGAGTCTCTCACTTTTGACGAGGTCATTGATGTTGATGGAGTTGGTGGTAACTTCAATTTGGAGACCGATCTGGACACGTTGGGAAGCAGTACCATTGATTTCAAAAAGATTTTTGATGAGTTGGAAGCTGTGAAACAAGATACTAGTGGTGGTGTATCTTCATTACAGTCATGTCAGACGGAATCAGTTGACATTAATTCATCAAGTTTGGAGTATGATATTGCAAAAAATGTATTCACTTGTAGTATGGATGGGGAAGGCGGCACAACTTTTTCACCTAGACTAACAAGCTACTTCCAAGATTTTCAGGAGCCTTTTCACAAACTTGTCTATCCAAAAGGGGATCCAGATGCTGTTACGCTAAGTAAGAGAGATGTTGATCAATTACAACCAAATACATACATCAATGACACGATTATCGATTTTTACATTCTATATATGAAGAATAAGATACAAGAGAAGGAAAAGGCTAGGTTCCACTTTTTCAATAGTTTTTTCTTTCGAAAACTGGCTGATATGGACAAACATCCCCACAATGCTTGTGACGGCAAATCTGCATTTGAACGTGTTTGTAAATGGACAACAAAAGTTAATTTGTTTGAAAAAGATTTTGTTTTCATGCCTGTGAACTTCAAACATCACTGGAGCTTAATAGTAATTTGTAATCCTGGCGAAGCGGTTAATATTACTGACAAAGAGCCGGAAAAGTCACTGAGGCTACCATGTATATTGCATATGGATTCTATCCAGGGACATCATAATGGTCTGAAAGACCTTGTGCAAAGTTATTTGTCTGAAGAATGGAAAGAGAGGAAGAAGGATACATATGTAGAAGACCTCTCATCAAGATTCTTGAATATGCACTTTCTCCCGGTACCACAGCAGGAAAACTCATTTGATTGTGGCCTCTTTTTGCTTCATTATCTAGAGCTCTTCCTGGCTCAAGTTCCATTTCATTTCAACCCTCTGAGACTAACCAATTGTTCCAACTTTCTCAATGTGGACTGGTTTCCACCTACGGATGCTTATCTCAAGCGAACACATATCCGTAAGTTAATATTTGAACTGGTGGAAAACCATGGTTCACATGAAGGCTTTTCCCCTGACGATGGTGATAACCAGCACTGCTCAGAATATATTGACAACAACAGGATTGGTGGTCAGTGTCATTTATTCAACAGGGAGGCATCGACTTCCCATTCTGGCCAGGGAATAGAAATGTTTCCATCTTACAATACTTCTAATATGGTTCTTAAGCAGCATTTTGAACCAGGAGCTGCATCGGGAACTTCACTGAGACATTGTAAATTTTTTAACCAGCCATCATTATCATCATCTAATCATTTGTTCAACAGGATTGGTGGTCAATGTCATTTATTCAATGGGGAGTCATCGACTTCCCATTCTGGCCAGGGAATAGAAATGTTTCCATCTTACAATACGTCTAATATGGTTCGTAAGGAGCATTGTGATCCAGGAGAAACATTGGGAACTTCACGGAAACATTGCCAATCTTTTGACCAGCGATCATTATCATCATCTAATCATTTGTTCAACAGGATTGGTGATCAGCGTCATTTATTCAACGGGGAGGCATCGACTTCCCATTCTGGCCAAGGAATAGAAATGTTTCCATCTTACAATACTTCTAATATGGTTCTTAAGGAGCATTTTGAACCAGGAAAACTATTGGGAACTTCACAGAGATATTGCCAATCTTTTGACCAACGATCATTATCATCGTCTAATTATTTGTTCAACAGGATTAGTGGTCAGTGTCATTTATTCAACAGGGAGGCATCAACTTCCCATTCTGGCCAGGGAATAGAAATGTTTTCATCTGACAATACTTCTAATATGGTTTTTAAGGAGCAACATTGGGAACTTCACTGA
Protein sequence

>MsG0580028207.01.T01

MLESLNLNDDAFDNVFANYQLQESLTFDEVIDVDGVGGNFNLETDLDTLGSSTIDFKKIFDELEAVKQDTSGGVSSLQSCQTESVDINSSSLEYDIAKNVFTCSMDGEGGTTFSPRLTSYFQDFQEPFHKLVYPKGDPDAVTLSKRDVDQLQPNTYINDTIIDFYILYMKNKIQEKEKARFHFFNSFFFRKLADMDKHPHNACDGKSAFERVCKWTTKVNLFEKDFVFMPVNFKHHWSLIVICNPGEAVNITDKEPEKSLRLPCILHMDSIQGHHNGLKDLVQSYLSEEWKERKKDTYVEDLSSRFLNMHFLPVPQQENSFDCGLFLLHYLELFLAQVPFHFNPLRLTNCSNFLNVDWFPPTDAYLKRTHIRKLIFELVENHGSHEGFSPDDGDNQHCSEYIDNNRIGGQCHLFNREASTSHSGQGIEMFPSYNTSNMVLKQHFEPGAASGTSLRHCKFFNQPSLSSSNHLFNRIGGQCHLFNGESSTSHSGQGIEMFPSYNTSNMVRKEHCDPGETLGTSRKHCQSFDQRSLSSSNHLFNRIGDQRHLFNGEASTSHSGQGIEMFPSYNTSNMVLKEHFEPGKLLGTSQRYCQSFDQRSLSSSNYLFNRISGQCHLFNREASTSHSGQGIEMFSSDNTSNMVFKEQHWELH*